Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0012628

Physical Location & Seq

Genomic Coordinates Forward (+)

54112841 .. 54117891

Gene Structure 5051 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG394500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2631 bp

ATGGAAGACAATGTTGGGCACCTTGGTTCTCCCGAAGGGCAAAGTCATTTAGCAAAGGCAAAGAGCTTATCTGATTGTCTTGGGATATCAAGTGATGCTAATGTTGAAATAGAGAAGGGAGTCCATATATCTGACCATGAAATTGATGGTTCCAAAGATGAAAATGTGCCAGAAAGGGTAGGGATTGGTCATTTCTCTTCGACTGGTTGTACAAAGGATGATAATTTGAAACAACCGTCTTCCGTGATTTCTACTGTCAGAAATTCAGTACTTGAGGGAGACATTCATGCTGAAGGAACTTCCAGAGTGACGTCATGTCGTAATGGACTTGATAATAATGAGGAGAGTGAAGCTTCTGCACCTTTTACGGTAGGAAACCCTTCTGTAAAGAAAAGTTCCGTGAAAAGTGATGTTTGCTCAGACAGTGGACAACCCAGTCAAACAAAAGTTGATGGTTTTGTAGATGGGAAAATGGATGGATATCCACCAAGCGTCAGCGAAATTGAAGTCAAGTCTTCAGTGCAGACGACCTTCCATGATAAGCAATGTAAATCCGAGTCTTCTTCTTCCAACTCAGCACAAGTCACTCTTCCAGCTTCTTCAAAGGATAGCTGTCAGGAGATGTCAGTCTGCAAAAGCTCATATGAGAATATCACACCTAGTGCCGTAGACACTTCAACTTGTACAAACTTTAAGCTTGAACAGCCTGCATGTAGAAGTTTAGTACCAGATATGGCCGTGCATGTGCCAAAATATCAGCTGGATGCTACCATGGTTTCATCCGAGGAACAATGTAATGACAATAAAGCTTCAGAGCCAATTGATAATGTCAGAACAAGGGGTAGCGGTAAGGTGCTTGGTTTGACCCCTGTTAATAGATGGGTGAGTGGAGAGAATATTAATCATTTGAAGTATGATGTCCCTAAGAAGAAAATTACAGAGCGTTATAATAAAATTAGATCAGAGACTTGCTATGACCTGGTTGATGATGATGCACTTGAGGTGGCTTGGAGAGTTGCAAAAGAAGTAGAGCAGGAGGTTGAGGCTTCAGGAAGCTCCTCTTCAATACCAGGGAGAAGTAGCAAGGTGTTTCATCTCAGCTCTGTGGATTCAGCAGGTTCTCATAGAGAAGGCTGCTTAACAGAAAGTGGTTCTATACACCAGAAGTGCAATGAGTCTGATAGTTTCTGTTCCACTAAAGAGACTATGGATATGAAACCAGTGACAAAGAAGGAACAGTTGTCTTTGGATGTCAAAGAGCCGGTTCAAGGCTTGGTCCCTGGAACTAGTGATGGCTGTCAGAGGCAGGGATCATCCAGCTTTGCTACTAAAGTTGAAGGTGTAGCTGCCAGTCACCAAACTTCTCATGTTTTTGGTATTGATCTTAATGAAGATATCCTGGAAAGTGAAGAAGAGTATCCTCAGAAGTCCATCAAAGAAACTGTATCTCTTCTTGAAAATGTGTCAAAGCCAATACCTGTTCTGGCTAAATCTGGAATTCCATTGTGCTTACCTGTGCCACAATTTCAGAGTGAGTGGGACTTAGGTGGTTGGAGGGGTTCAGCTGCAACTAGTGCTTTTAAACCAACTTCTTTTTCTGAGAGTTGTAATAGAAATGCATTGTCGACGAATGACACTAATTGCAGCTCGAACTATTCACATGTTAAAGGGATTGACCTCAATGTTGCTGCTGCTGCTGCTGAGTTTGATGTTGAATTACCCTCCAAGAAACCTATCCCAGCACTGTCTGGTAATTATTCAAAAGATTCATCTGTTGAAGTGAATTCAAGACGAGCAAGGATGCTTGACATTGATCTCAACTGTGTTGGTGAAAATGGTGACAGCTCCCGACAATTGTCTCCACCAGCTTCTGTTAGGGATTTTGATTTGAATGACAACCTAACTTCTGCAGATGCATGCATTGGTCCGTACCAGACATGTGTAGGCTCTTTAGGCTTGAGAAATGGGGATTTAGATGATCCAGCGGTCTCTTCTGTGGAATATTCAAGACAATCAGACTGTAAAACTATCAGATCTTCATGTTCTCAGGACTTGAGTTCAAGGGAGGGCTTTAGTCATAATCATGACAAACCCTTTCTCGTTGCTGCAACCAATATGGTTCCCTCAAATGAACAACTGCAGAGGATGGCTGCCTTGCAACAGAAGGTCGCCTTTTCACCACCACCACCTCACGCCTTTCTCTATAATAATGGATTCTGCATTGACCCGAACAACAGCTTATCCCCAACTGTTTACCCTCCTTCCTTCCTTCCATATATGACAGATCCACGTGCAACCACTGTAATCCCACAATATTTTGGTTCTGGTGCTGTTCCGGTGTTTCCGATGGCCCCACATCTAATGGGGGTTCCTCATGCATCATCCCCAAATGACATTGCTTTCATCAGGCCAACTTTTGATCTAAACATGGGAGCAAATTCTTTGGAGAATGGGAGCAGGGGGATGAATGCTAGACAACTTTCTATTCCTGTAAGTGATGCAATTATGGAAGAACAAATGAAATCTTTCCAACAAGTTGGTTTGACTGCTGTACCCATGAAGAGGAGGGAGCCAGATGGGGGATGGGACTCCCATCAGCTTTGCTTTAGACAAGCCGCTTCTTGGCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

876

Amino Acids

94.59

Weight (kDa)

5.12

Isoelectric Point (pI)

53.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012628)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g32010 FvH4_5g32010
prunus_persica	Prupe.1G553900_v2.0.a1 Prupe.1G553900_v2.0.a1 Prupe.1G553900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0228011
rosa_laevigata	RLG00000001596
rosa_multiflora	Rmu_sc0015384.1_g000001 Rmu_sc0018857.1_g000005
rosa_roxburghii	Rroxscaffold_3G00231650
rosa_rugosa	Rorug07G0244900 Rorug07G0245000 Rorug07G0245100 Rorug07G0245200
rosa_samantha	Rh7AG398900 Rh7BG380300 Rh7CG417000 Rh7DG394500
rosa_wichuraiana	Rw7G033160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	948
AasI	GACNNNNNNGTC	1 cut(s)	435
AatII	GACGTC	1 cut(s)	314
Acc36I	ACCTGC	1 cut(s)	1106
AccB1I	GGYRCC	1 cut(s)	18
AccI	GTMKAC	2 cut(s)	669, 1625
AciI	CCGC	3 cut(s)	846, 1985, 2616
AclWI	GGATC	3 cut(s)	1318, 1973, 2279
AcoI	YGGCCR	1 cut(s)	735
AcsI	RAATTY	4 cut(s)	262, 1497, 1783, 2437
AcuI	CTGAAG	4 cut(s)	312, 501, 795, 1032
AcvI	CACGTG	1 cut(s)	2291
AcyI	GRCGYC	1 cut(s)	311
AdeI	CACNNNGTG	1 cut(s)	662
AfaI	GTAC	6 cut(s)	211, 270, 685, 726, 1931, 2553
AfiI	CCNNNNNNNGG	4 cut(s)	1268, 2562, 2579, 2622
AflIII	ACRYGT	2 cut(s)	1660, 1937
AhdI	GACNNNNNGTC	1 cut(s)	315
AhlI	ACTAGT	2 cut(s)	1286, 1571
AjnI	CCWGG	4 cut(s)	978, 1069, 1279, 1398
AjuI	GAANNNNNNNTTGG	3 cut(s)	29, 1579, 1611
Alw26I	GTCTC	5 cut(s)	273, 959, 1196, 1863, 1993
AlwI	GGATC	3 cut(s)	1318, 1973, 2279
AlwNI	CAGNNNCTG	1 cut(s)	1871
AoxI	GGCC	3 cut(s)	735, 2349, 2408
ApoI	RAATTY	4 cut(s)	262, 1497, 1783, 2437
ArsI	GACNNNNNNTTYG	2 cut(s)	492, 524
AseI	ATTAAT	1 cut(s)	900
Asp700I	GAANNNNTTC	2 cut(s)	379, 2525
AspS9I	GGNCC	3 cut(s)	1276, 1925, 2350
AsuHPI	GGTGA	5 cut(s)	895, 1346, 1841, 1850, 2169
AvaII	GGWCC	2 cut(s)	1276, 1925
BaeGI	GKGCMC	1 cut(s)	21
BaeI	ACNNNNGTAYC	2 cut(s)	2535, 2568
BanI	GGYRCC	1 cut(s)	18
BbrPI	CACGTG	1 cut(s)	2291
BbsI	GAAGAC	4 cut(s)	12, 231, 507, 552
BceAI	ACGGC	2 cut(s)	650, 722
BciT130I	CCWGG	4 cut(s)	980, 1071, 1281, 1400
BciVI	GTATCC	1 cut(s)	1428
BcoDI	GTCTC	5 cut(s)	273, 959, 1196, 1863, 1993
BcuI	ACTAGT	2 cut(s)	1286, 1571
BfaI	CTAG	4 cut(s)	660, 1287, 1572, 2472
BfmI	CTRYAG	2 cut(s)	1908, 2138
BfuAI	ACCTGC	1 cut(s)	1106
BfuI	GTATCC	1 cut(s)	1428
BglII	AGATCT	1 cut(s)	2033
BmcAI	AGTACT	1 cut(s)	270
Bme1390I	CCNGG	4 cut(s)	980, 1071, 1281, 1400
Bme18I	GGWCC	2 cut(s)	1276, 1925
BmeRI	GACNNNNNGTC	1 cut(s)	315
BmgT120I	GGNCC	3 cut(s)	1276, 1925, 2350
BmiI	GGNNCC	7 cut(s)	20, 151, 1278, 2121, 2352, 2370, 2571
BmrFI	CCNGG	4 cut(s)	980, 1071, 1281, 1400
BmrI	ACTGGG	1 cut(s)	429
BmsI	GCATC	7 cut(s)	85, 754, 982, 1791, 1903, 2387, 2488
BmuI	ACTGGG	1 cut(s)	429
BoxI	GACNNNNGTC	1 cut(s)	1855
BpiI	GAAGAC	4 cut(s)	12, 231, 507, 552
BpuEI	CTTGAG	4 cut(s)	293, 1019, 1978, 2074
BsaAI	YACGTR	1 cut(s)	2291
BsaBI	GATNNNNATC	1 cut(s)	480
BsaHI	GRCGYC	1 cut(s)	311
BsaI	GGTCTC	1 cut(s)	1993
BsaJI	CCNNGG	5 cut(s)	22, 771, 783, 1070, 1279
BsaWI	WCCGGW	1 cut(s)	2335
Bsc4I	CCNNNNNNNGG	4 cut(s)	1268, 2562, 2579, 2622
Bse118I	RCCGGY	1 cut(s)	1261
Bse1I	ACTGG	4 cut(s)	208, 435, 1220, 1350
Bse3DI	GCAATG	3 cut(s)	551, 1177, 2394
Bse8I	GATNNNNATC	1 cut(s)	480
BseBI	CCWGG	4 cut(s)	980, 1071, 1281, 1400
BseDI	CCNNGG	5 cut(s)	22, 771, 783, 1070, 1279
BseJI	GATNNNNATC	1 cut(s)	480
BseLI	CCNNNNNNNGG	4 cut(s)	1268, 2562, 2579, 2622
BseMI	GCAATG	3 cut(s)	551, 1177, 2394
BseMII	CTCAG	7 cut(s)	432, 588, 1111, 1436, 1590, 1692, 2060
BseNI	ACTGG	4 cut(s)	208, 435, 1220, 1350
BseRI	GAGGAG	3 cut(s)	356, 1048, 2578
BseSI	GKGCMC	1 cut(s)	21
BseYI	CCCAGC	1 cut(s)	1738
BsgI	GTGCAG	2 cut(s)	342, 542
BshFI	GGCC	3 cut(s)	737, 2351, 2410
BshNI	GGYRCC	1 cut(s)	18
BsiSI	CCGG	2 cut(s)	1262, 2336
BslFI	GGGAC	4 cut(s)	905, 1262, 1553, 2600
BslI	CCNNNNNNNGG	4 cut(s)	1268, 2562, 2579, 2622
BsmAI	GTCTC	5 cut(s)	273, 959, 1196, 1863, 1993
BsmFI	GGGAC	4 cut(s)	905, 1262, 1553, 2600
BsmI	GAATGC	1 cut(s)	2473
BsnI	GGCC	3 cut(s)	737, 2351, 2410
Bso31I	GGTCTC	1 cut(s)	1993
Bsp1286I	GDGCHC	1 cut(s)	21
Bsp1407I	TGTACA	2 cut(s)	209, 683
Bsp143I	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2284, 2419
Bsp19I	CCATGG	1 cut(s)	771
BspACI	CCGC	3 cut(s)	846, 1985, 2616
BspANI	GGCC	3 cut(s)	737, 2351, 2410
BspCNI	CTCAG	7 cut(s)	431, 587, 1110, 1435, 1591, 1693, 2059
BspHI	TCATGA	1 cut(s)	2083
BspLI	GGNNCC	7 cut(s)	20, 151, 1278, 2121, 2352, 2370, 2571
BspMAI	CTGCAG	2 cut(s)	1912, 2142
BspMI	ACCTGC	1 cut(s)	1106
BspPI	GGATC	3 cut(s)	1318, 1973, 2279
BspT107I	GGYRCC	1 cut(s)	18
BspTNI	GGTCTC	1 cut(s)	1993
BsrDI	GCAATG	3 cut(s)	551, 1177, 2394
BsrFI	RCCGGY	1 cut(s)	1261
BsrGI	TGTACA	2 cut(s)	209, 683
BsrI	ACTGG	4 cut(s)	208, 435, 1220, 1350
BssAI	RCCGGY	1 cut(s)	1261
BssECI	CCNNGG	5 cut(s)	22, 771, 783, 1070, 1279
BssMI	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2284, 2419
BssNI	GRCGYC	1 cut(s)	311
BssT1I	CCWWGG	2 cut(s)	22, 771
Bst2UI	CCWGG	4 cut(s)	980, 1071, 1281, 1400
Bst6I	CTCTTC	7 cut(s)	202, 594, 1066, 1407, 1455, 1996, 2555
BstACI	GRCGYC	1 cut(s)	311
BstAPI	GCANNNNNTGC	1 cut(s)	1574
BstAUI	TGTACA	2 cut(s)	209, 683
BstBAI	YACGTR	1 cut(s)	2291
BstC8I	GCNNGC	2 cut(s)	708, 1918
BstDEI	CTNAG	9 cut(s)	418, 574, 924, 1097, 1422, 1543, 1599, 1701, 2046
BstDSI	CCRYGG	1 cut(s)	771
BstKTI	GATC	8 cut(s)	962, 1313, 1384, 1816, 1981, 2036, 2287, 2422
BstMAI	GTCTC	5 cut(s)	273, 959, 1196, 1863, 1993
BstMBI	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2284, 2419
BstMWI	GCNNNNNNNGC	5 cut(s)	703, 1574, 1694, 1697, 1953
BstNI	CCWGG	4 cut(s)	980, 1071, 1281, 1400
BstNSI	RCATGY	5 cut(s)	714, 746, 1664, 1920, 1941
BstPAI	GACNNNNGTC	1 cut(s)	1855
BstSCI	CCNGG	4 cut(s)	978, 1069, 1279, 1398
BstSFI	CTRYAG	2 cut(s)	1908, 2138
BstSLI	GKGCMC	1 cut(s)	21
BstV2I	GAAGAC	4 cut(s)	12, 231, 507, 552
BstX2I	RGATCY	2 cut(s)	2033, 2284
BstXI	CCANNNNNNTGG	1 cut(s)	2537
BstYI	RGATCY	2 cut(s)	2033, 2284
BsuI	GTATCC	1 cut(s)	1428
BsuRI	GGCC	3 cut(s)	737, 2351, 2410
BtgI	CCRYGG	1 cut(s)	771
BtsIMutI	CAGTG	5 cut(s)	430, 525, 1227, 1742, 2298
BveI	ACCTGC	1 cut(s)	1106
Cac8I	GCNNGC	2 cut(s)	708, 1918
CaiI	CAGNNNCTG	1 cut(s)	1871
CciI	TCATGA	1 cut(s)	2083
Cfr10I	RCCGGY	1 cut(s)	1261
Cfr13I	GGNCC	3 cut(s)	1276, 1925, 2350
CseI	GACGC	1 cut(s)	481
CsiI	ACCWGGT	1 cut(s)	978
Csp6I	GTAC	6 cut(s)	210, 269, 684, 725, 1930, 2552
CviQI	GTAC	6 cut(s)	210, 269, 684, 725, 1930, 2552
DdeI	CTNAG	9 cut(s)	418, 574, 924, 1097, 1422, 1543, 1599, 1701, 2046
DpnI	GATC	8 cut(s)	961, 1312, 1383, 1815, 1980, 2035, 2286, 2421
DpnII	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2284, 2419
DraI	TTTAAA	1 cut(s)	1582
DraIII	CACNNNGTG	1 cut(s)	662
DrdI	GACNNNNNNGTC	1 cut(s)	435
DriI	GACNNNNNGTC	1 cut(s)	315
DseDI	GACNNNNNNGTC	1 cut(s)	435
EaeI	YGGCCR	1 cut(s)	735
Eam1104I	CTCTTC	7 cut(s)	202, 594, 1066, 1407, 1455, 1996, 2555
Eam1105I	GACNNNNNGTC	1 cut(s)	315
EarI	CTCTTC	7 cut(s)	202, 594, 1066, 1407, 1455, 1996, 2555
Eco130I	CCWWGG	2 cut(s)	22, 771
Eco31I	GGTCTC	1 cut(s)	1993
Eco32I	GATATC	3 cut(s)	87, 482, 1396
Eco47I	GGWCC	2 cut(s)	1276, 1925
Eco57I	CTGAAG	4 cut(s)	312, 501, 795, 1032
Eco72I	CACGTG	1 cut(s)	2291
EcoRI	GAATTC	2 cut(s)	1497, 1783
EcoRII	CCWGG	4 cut(s)	978, 1069, 1279, 1398
EcoRV	GATATC	3 cut(s)	87, 482, 1396
EcoT14I	CCWWGG	2 cut(s)	22, 771
EcoT22I	ATGCAT	4 cut(s)	1621, 1918, 1922, 2380
ErhI	CCWWGG	2 cut(s)	22, 771
FalI	AAGNNNNNCTT	6 cut(s)	573, 605, 1045, 1077, 2156, 2188
FaqI	GGGAC	4 cut(s)	905, 1262, 1553, 2600
FauNDI	CATATG	1 cut(s)	643
FblI	GTMKAC	2 cut(s)	669, 1625
FspBI	CTAG	4 cut(s)	660, 1287, 1572, 2472
GsaI	CCCAGC	1 cut(s)	1742
HaeIII	GGCC	3 cut(s)	737, 2351, 2410
HapII	CCGG	2 cut(s)	1262, 2336
HgaI	GACGC	1 cut(s)	481
Hin1I	GRCGYC	1 cut(s)	311
HincII	GTYRAC	1 cut(s)	1626
HindII	GTYRAC	1 cut(s)	1626
HindIII	AAGCTT	3 cut(s)	351, 695, 807
HinfI	GANTC	7 cut(s)	120, 557, 1109, 1175, 1766, 2214, 2588
HpaII	CCGG	2 cut(s)	1262, 2336
HphI	GGTGA	5 cut(s)	895, 1346, 1841, 1850, 2169
Hpy166II	GTNNAC	4 cut(s)	428, 670, 1626, 2254
Hpy8I	GTNNAC	4 cut(s)	428, 670, 1626, 2254
Hpy99I	CGWCG	1 cut(s)	1630
HpyCH4IV	ACGT	2 cut(s)	311, 2290
HpyF10VI	GCNNNNNNNGC	5 cut(s)	703, 1574, 1694, 1697, 1953
HpyF3I	CTNAG	9 cut(s)	418, 574, 924, 1097, 1422, 1543, 1599, 1701, 2046
HpySE526I	ACGT	2 cut(s)	311, 2290
Hsp92I	GRCGYC	1 cut(s)	311
Kzo9I	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2284, 2419
LmnI	GCTCC	5 cut(s)	1061, 1850, 2432, 2454, 2569
LweI	GCATC	7 cut(s)	85, 754, 982, 1791, 1903, 2387, 2488
MabI	ACCWGGT	1 cut(s)	978
MaeI	CTAG	4 cut(s)	660, 1287, 1572, 2472
MaeII	ACGT	2 cut(s)	311, 2290
MaeIII	GTNAC	5 cut(s)	307, 583, 1222, 1352, 1838
MalI	GATC	8 cut(s)	961, 1312, 1383, 1815, 1980, 2035, 2286, 2421
MboI	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2284, 2419
MfeI	CAATTG	2 cut(s)	819, 1853
MflI	RGATCY	2 cut(s)	2033, 2284
MhlI	GDGCHC	1 cut(s)	21
MlyI	GAGTC	4 cut(s)	129, 566, 1184, 2582
MmeI	TCCRAC	3 cut(s)	594, 1532, 2554
Mph1103I	ATGCAT	4 cut(s)	1621, 1918, 1922, 2380
MroXI	GAANNNNTTC	2 cut(s)	379, 2525
MseI	TTAA	7 cut(s)	693, 873, 900, 1139, 1386, 1581, 1665
MslI	CAYNNNNRTG	1 cut(s)	2082
MspA1I	CMGCKG	3 cut(s)	760, 1565, 1985
MspI	CCGG	2 cut(s)	1262, 2336
MspR9I	CCNGG	4 cut(s)	980, 1071, 1281, 1400
MunI	CAATTG	2 cut(s)	819, 1853
Mva1269I	GAATGC	1 cut(s)	2473
MvaI	CCWGG	4 cut(s)	980, 1071, 1281, 1400
MwoI	GCNNNNNNNGC	5 cut(s)	703, 1574, 1694, 1697, 1953
NcoI	CCATGG	1 cut(s)	771
NdeI	CATATG	1 cut(s)	643
NdeII	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2284, 2419
NlaIV	GGNNCC	7 cut(s)	20, 151, 1278, 2121, 2352, 2370, 2571
NmuCI	GTSAC	5 cut(s)	307, 583, 1222, 1352, 1838
NsiI	ATGCAT	4 cut(s)	1621, 1918, 1922, 2380
NspI	RCATGY	5 cut(s)	714, 746, 1664, 1920, 1941
PaeI	GCATGC	1 cut(s)	1920
PagI	TCATGA	1 cut(s)	2083
PciI	ACATGT	2 cut(s)	1660, 1937
PctI	GAATGC	1 cut(s)	2473
PdmI	GAANNNNTTC	2 cut(s)	379, 2525
PfeI	GAWTC	3 cut(s)	1109, 1766, 2214
PfoI	TCCNGGA	1 cut(s)	1398
PleI	GAGTC	4 cut(s)	128, 565, 1183, 2582
PmaCI	CACGTG	1 cut(s)	2291
PmlI	CACGTG	1 cut(s)	2291
PpsI	GAGTC	4 cut(s)	128, 565, 1183, 2582
Ppu21I	YACGTR	1 cut(s)	2291
PscI	ACATGT	2 cut(s)	1660, 1937
PshAI	GACNNNNGTC	1 cut(s)	1855
PshBI	ATTAAT	1 cut(s)	900
PsiI	TTATAA	1 cut(s)	948
Psp6I	CCWGG	4 cut(s)	978, 1069, 1279, 1398
PspCI	CACGTG	1 cut(s)	2291
PspFI	CCCAGC	1 cut(s)	1738
PspGI	CCWGG	4 cut(s)	978, 1069, 1279, 1398
PspN4I	GGNNCC	7 cut(s)	20, 151, 1278, 2121, 2352, 2370, 2571
PspPI	GGNCC	3 cut(s)	1276, 1925, 2350
PstI	CTGCAG	2 cut(s)	1912, 2142
PstNI	CAGNNNCTG	1 cut(s)	1871
PsuI	RGATCY	2 cut(s)	2033, 2284
PvuII	CAGCTG	2 cut(s)	760, 1565
RsaI	GTAC	6 cut(s)	211, 270, 685, 726, 1931, 2553
RsaNI	GTAC	6 cut(s)	210, 269, 684, 725, 1930, 2552
RseI	CAYNNNNRTG	1 cut(s)	2082
SalI	GTCGAC	1 cut(s)	1624
SaqAI	TTAA	7 cut(s)	693, 873, 900, 1139, 1386, 1581, 1665
Sau3AI	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2284, 2419
Sau96I	GGNCC	3 cut(s)	1276, 1925, 2350
ScaI	AGTACT	1 cut(s)	270
SchI	GAGTC	4 cut(s)	129, 566, 1184, 2582
ScrFI	CCNGG	4 cut(s)	980, 1071, 1281, 1400
SduI	GDGCHC	1 cut(s)	21
SexAI	ACCWGGT	1 cut(s)	978
SfaNI	GCATC	7 cut(s)	85, 754, 982, 1791, 1903, 2387, 2488
SfcI	CTRYAG	2 cut(s)	1908, 2138
SinI	GGWCC	2 cut(s)	1276, 1925
SmiMI	CAYNNNNRTG	1 cut(s)	2082
SmlI	CTYRAG	4 cut(s)	272, 998, 1957, 2053
SmoI	CTYRAG	4 cut(s)	272, 998, 1957, 2053
SpeI	ACTAGT	2 cut(s)	1286, 1571
SphI	GCATGC	1 cut(s)	1920
SsiI	CCGC	3 cut(s)	846, 1985, 2616
SspI	AATATT	3 cut(s)	898, 2003, 2315
SspMI	CTAG	4 cut(s)	660, 1287, 1572, 2472
StyD4I	CCNGG	4 cut(s)	978, 1069, 1279, 1398
StyI	CCWWGG	2 cut(s)	22, 771
TaiI	ACGT	2 cut(s)	314, 2293
TaqI	TCGA	3 cut(s)	200, 1625, 1649
TatI	WGTACW	3 cut(s)	209, 268, 683
TauI	GCSGC	1 cut(s)	2618
TfiI	GAWTC	3 cut(s)	1109, 1766, 2214
Tru1I	TTAA	7 cut(s)	693, 873, 900, 1139, 1386, 1581, 1665
Tru9I	TTAA	7 cut(s)	693, 873, 900, 1139, 1386, 1581, 1665
TscAI	CASTG	5 cut(s)	430, 525, 1227, 1749, 2305
TseFI	GTSAC	5 cut(s)	307, 583, 1222, 1352, 1838
Tsp45I	GTSAC	5 cut(s)	307, 583, 1222, 1352, 1838
TspGWI	ACGGA	3 cut(s)	232, 388, 1917
TspRI	CASTG	5 cut(s)	430, 525, 1227, 1749, 2305
VpaK11BI	GGWCC	2 cut(s)	1276, 1925
VspI	ATTAAT	1 cut(s)	900
XapI	RAATTY	4 cut(s)	262, 1497, 1783, 2437
XceI	RCATGY	5 cut(s)	714, 746, 1664, 1920, 1941
XcmI	CCANNNNNNNNNTGG	2 cut(s)	143, 2580
XmiI	GTMKAC	2 cut(s)	669, 1625
XmnI	GAANNNNTTC	2 cut(s)	379, 2525
XspI	CTAG	4 cut(s)	660, 1287, 1572, 2472
ZraI	GACGTC	1 cut(s)	312
ZrmI	AGTACT	1 cut(s)	270
Zsp2I	ATGCAT	4 cut(s)	1621, 1918, 1922, 2380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.