RchiOBHm_Chr7g0241951

Heparan-alpha-glucosaminide N-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0005188
Physical Location & Seq
Reverse (-)
67940601 .. 67945131
4531 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1437 bp
ATGTCTCCGGTCATTGACGTCGCTCCTCTTCTTCACCCCTACAGAGACAGAGACGGAGACGGAGACAGAGATTCGTCATCCCAAGGAATTGTTCCTTCATCACCTTCCAACGGCTCAGGTCCTCCGACACCTAATCAACGCATCGCCTCACTCGACGTCTTCCGTGGCCTCACCGTTGCGTTGATGATTTTGGTTGACGATGCTGGAGGAGCTTTCCCATCCATAAATCACTCTCCCTGGTTCGGTGTTACACTTGCAGATTTTGTAATGCCATTTTTCCTGTTTCTTGTTGGTGTCTCCGTTGGTCTAGCATTCAAGAAAATATCAAACAAGAAAACTGCCACCAAGAAAGTCATGCTTCGTGCAGTAAATCTCTTCCTCTTGGGGTTGTTACTGCAAGGTGGGTATTTCCATGGGCGTAAACACTTAACATATGGAGTTGATGTCAGAAAGATACGTTGGCTAGGTGTACTACAGAGGATATCGATTGGATATCTGTTGGCTTCAATGTCGGAAATCTGGCTTGTTAACAACATAATGGTCGACTCACTGGTTGGTTTCGCTAGGAAATACTACATTCAGTGGTTGTTTGCTATAGGATTGTGCTCATTTTATATGAGCTTGCTGTATGGTCTCTTAGTTCCAAGTTGGGAATATGAAGCTCCGCGCATGGATTTGTCTGCTCTTACCTCTGGTACTCAAACTATTTATTGTGATGTGAGAAGCAGTCTTCAACCTCCTTGCAATGCTGTTGGTTTTATCGATCGCGTTATTTTGGGTGAACATCATCTTTACCAACATCCCGTTTACAGAAGAACAAAGGAATGCAGTATTAATTCTCCCGACTATGGACCGCTGCCTCCTAATTCTCCTGGCTGGTGCCTTGCACCATTTGACCCAGAGGGAATCTTAAGCTCTCTGATGGCTGCTGTTACTTGTTTTGTGGGATTGCATTTTGGGCACATATTATTGCACTTTAAGGACCAAAACCAGAGGGTACTGTTATGGTGCATGTCTTCCTTTCCTATTCTAATCTTTGGTTTTGTTTTGGAGATGCTAGGTATTCCTTTCTGTAAACCACTGTACACACTGAGCTATGCATGCATTACAGCAGGAGCATCAGGCTTGATCTTAAGTATTATCTTCTACATAGTTGATGTCAAACATTGCAGAAAGCCCACAGTATTGTTGCAATGGATGGGGATGAATGCGCTCCTTATATATGCTTTTGCTGCTTGTGACCTTTTCTCAGTAGGATTGCAAGGTTTCTATTGGCAGTCCCCTGAAAACAACTTGGTTGATGGAGCTGAAGCATTACTGCAGGTGATAGTCCACTCAAAGAATTGGGGTACCCTAGTGTTTGTAATACTTGAGATTTTATTTTGGGGTCTTATTTCTGGCATTTTACACATGAAAGGCGTATATATAAAACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00531 ko01100 ko04142 map00531 map01100 map04142
Pfam Domains
Protein Families
DUF1624

Protein Analysis

478

Amino Acids

53.13

Weight (kDa)

8.4

Isoelectric Point (pI)

46.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HGSNAT_cat PF07786 47 - 194 4e-07 Heparan-alpha-glucosaminide N-acetyltransferase, catalytic
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1312
AatII GACGTC 2 cut(s) 21, 159
Acc36I ACCTGC 1 cut(s) 1312
Acc65I GGTACC 1 cut(s) 1349
AccB1I GGYRCC 2 cut(s) 879, 1349
AccI GTMKAC 1 cut(s) 543
AccII CGCG 2 cut(s) 667, 768
AciI CCGC 2 cut(s) 665, 854
AcuI CTGAAG 1 cut(s) 1329
AcyI GRCGYC 2 cut(s) 18, 156
AfaI GTAC 5 cut(s) 471, 697, 999, 1085, 1351
AfiI CCNNNNNNNGG 3 cut(s) 110, 242, 848
AflII CTTAAG 2 cut(s) 910, 1132
AgsI TTSAA 3 cut(s) 316, 507, 734
AjnI CCWGG 2 cut(s) 236, 871
AjuI GAANNNNNNNTTGG 4 cut(s) 75, 107, 442, 474
AluBI AGCT 6 cut(s) 212, 621, 662, 915, 1095, 1307
AluI AGCT 6 cut(s) 212, 621, 662, 915, 1095, 1307
Alw21I GWGCWC 1 cut(s) 608
Alw26I GTCTC 7 cut(s) 9, 39, 45, 51, 57, 301, 638
AoxI GGCC 1 cut(s) 166
ApeKI GCWGC 3 cut(s) 856, 926, 1232
AseI ATTAAT 1 cut(s) 834
Asp718I GGTACC 1 cut(s) 1349
AspLEI GCGC 2 cut(s) 669, 1213
AspS9I GGNCC 3 cut(s) 119, 851, 982
AsuHPI GGTGA 5 cut(s) 26, 93, 163, 791, 1336
AvaII GGWCC 3 cut(s) 119, 851, 982
BaeGI GKGCMC 1 cut(s) 963
BaeI ACNNNNGTAYC 2 cut(s) 1341, 1374
BanI GGYRCC 2 cut(s) 879, 1349
BbsI GAAGAC 3 cut(s) 151, 722, 1008
Bbv12I GWGCWC 1 cut(s) 608
BbvI GCAGC 3 cut(s) 843, 913, 1219
BccI CCATC 4 cut(s) 226, 916, 1192, 1295
BceAI ACGGC 1 cut(s) 127
BciT130I CCWGG 2 cut(s) 238, 873
BcoDI GTCTC 7 cut(s) 9, 39, 45, 51, 57, 301, 638
BfaI CTAG 5 cut(s) 308, 464, 564, 1058, 1355
BfmI CTRYAG 4 cut(s) 40, 473, 594, 1319
BfrI CTTAAG 2 cut(s) 910, 1132
BfuAI ACCTGC 1 cut(s) 1312
BisI GCNGC 3 cut(s) 857, 927, 1233
BlsI GCNGC 3 cut(s) 858, 928, 1234
Bme1390I CCNGG 2 cut(s) 238, 873
Bme18I GGWCC 3 cut(s) 119, 851, 982
BmgT120I GGNCC 3 cut(s) 119, 851, 982
BmiI GGNNCC 2 cut(s) 881, 1351
BmrFI CCNGG 2 cut(s) 238, 873
BmsI GCATC 4 cut(s) 150, 190, 1044, 1127
BpiI GAAGAC 3 cut(s) 151, 722, 1008
BpmI CTGGAG 1 cut(s) 225
Bpu10I CCTNAGC 1 cut(s) 115
BpuEI CTTGAG 1 cut(s) 1391
Bsa29I ATCGAT 2 cut(s) 485, 762
BsaHI GRCGYC 2 cut(s) 18, 156
BsaI GGTCTC 1 cut(s) 638
BsaJI CCNNGG 4 cut(s) 82, 163, 236, 412
BsaWI WCCGGW 1 cut(s) 7
BsaXI ACNNNNNCTCC 2 cut(s) 429, 459
Bsc4I CCNNNNNNNGG 3 cut(s) 110, 242, 848
Bse1I ACTGG 1 cut(s) 555
Bse3DI GCAATG 3 cut(s) 751, 1165, 1199
BseBI CCWGG 2 cut(s) 238, 873
BseCI ATCGAT 2 cut(s) 485, 762
BseDI CCNNGG 4 cut(s) 82, 163, 236, 412
BseGI GGATG 5 cut(s) 77, 218, 799, 1203, 1209
BseLI CCNNNNNNNGG 3 cut(s) 110, 242, 848
BseMI GCAATG 3 cut(s) 751, 1165, 1199
BseMII CTCAG 3 cut(s) 129, 1082, 1263
BseNI ACTGG 1 cut(s) 555
BseRI GAGGAG 2 cut(s) 15, 222
BseSI GKGCMC 1 cut(s) 963
BseXI GCAGC 3 cut(s) 843, 913, 1219
BsgI GTGCAG 1 cut(s) 384
Bsh1236I CGCG 2 cut(s) 667, 768
Bsh1285I CGRYCG 1 cut(s) 766
BshFI GGCC 1 cut(s) 168
BshNI GGYRCC 2 cut(s) 879, 1349
BshVI ATCGAT 2 cut(s) 485, 762
BsiEI CGRYCG 1 cut(s) 766
BsiHKAI GWGCWC 1 cut(s) 608
BsiSI CCGG 1 cut(s) 8
BslFI GGGAC 1 cut(s) 1264
BslI CCNNNNNNNGG 3 cut(s) 110, 242, 848
BsmAI GTCTC 7 cut(s) 9, 39, 45, 51, 57, 301, 638
BsmBI CGTCTC 2 cut(s) 45, 51
BsmFI GGGAC 1 cut(s) 1264
BsmI GAATGC 3 cut(s) 311, 830, 1213
BsnI GGCC 1 cut(s) 168
Bso31I GGTCTC 1 cut(s) 638
Bsp1286I GDGCHC 2 cut(s) 608, 963
Bsp1407I TGTACA 1 cut(s) 1083
Bsp143I GATC 2 cut(s) 763, 1128
Bsp19I CCATGG 1 cut(s) 412
BspACI CCGC 2 cut(s) 665, 854
BspANI GGCC 1 cut(s) 168
BspCNI CTCAG 3 cut(s) 128, 1083, 1262
BspDI ATCGAT 2 cut(s) 485, 762
BspFNI CGCG 2 cut(s) 667, 768
BspLI GGNNCC 2 cut(s) 881, 1351
BspMAI CTGCAG 1 cut(s) 1323
BspMI ACCTGC 1 cut(s) 1312
BspT107I GGYRCC 2 cut(s) 879, 1349
BspTI CTTAAG 2 cut(s) 910, 1132
BspTNI GGTCTC 1 cut(s) 638
BsrDI GCAATG 3 cut(s) 751, 1165, 1199
BsrGI TGTACA 1 cut(s) 1083
BsrI ACTGG 1 cut(s) 555
BssECI CCNNGG 4 cut(s) 82, 163, 236, 412
BssMI GATC 2 cut(s) 763, 1128
BssNI GRCGYC 2 cut(s) 18, 156
BssT1I CCWWGG 2 cut(s) 82, 412
Bst2UI CCWGG 2 cut(s) 238, 873
Bst4CI ACNGT 5 cut(s) 175, 1002, 1083, 1183, 1434
Bst6I CTCTTC 2 cut(s) 33, 380
BstACI GRCGYC 2 cut(s) 18, 156
BstAFI CTTAAG 2 cut(s) 910, 1132
BstAUI TGTACA 1 cut(s) 1083
BstC8I GCNNGC 2 cut(s) 623, 1102
BstDEI CTNAG 4 cut(s) 115, 637, 1091, 1249
BstDSI CCRYGG 2 cut(s) 163, 412
BstF5I GGATG 5 cut(s) 77, 218, 799, 1203, 1209
BstFNI CGCG 2 cut(s) 667, 768
BstHHI GCGC 2 cut(s) 669, 1213
BstKTI GATC 2 cut(s) 766, 1131
BstMAI GTCTC 7 cut(s) 9, 39, 45, 51, 57, 301, 638
BstMBI GATC 2 cut(s) 763, 1128
BstMCI CGRYCG 1 cut(s) 766
BstMWI GCNNNNNNNGC 4 cut(s) 209, 958, 1101, 1232
BstNI CCWGG 2 cut(s) 238, 873
BstNSI RCATGY 2 cut(s) 1015, 1104
BstSCI CCNGG 2 cut(s) 236, 871
BstSFI CTRYAG 4 cut(s) 40, 473, 594, 1319
BstSLI GKGCMC 1 cut(s) 963
BstUI CGCG 2 cut(s) 667, 768
BstV1I GCAGC 3 cut(s) 843, 913, 1219
BstV2I GAAGAC 3 cut(s) 151, 722, 1008
Bsu15I ATCGAT 2 cut(s) 485, 762
BsuRI GGCC 1 cut(s) 168
BsuTUI ATCGAT 2 cut(s) 485, 762
BtgI CCRYGG 2 cut(s) 163, 412
BtgZI GCGATG 1 cut(s) 127
BtsCI GGATG 5 cut(s) 77, 218, 799, 1203, 1209
BtsIMutI CAGTG 4 cut(s) 548, 587, 1079, 1088
BveI ACCTGC 1 cut(s) 1312
Cac8I GCNNGC 2 cut(s) 623, 1102
CfoI GCGC 2 cut(s) 669, 1213
Cfr13I GGNCC 3 cut(s) 119, 851, 982
ClaI ATCGAT 2 cut(s) 485, 762
Csp6I GTAC 5 cut(s) 470, 696, 998, 1084, 1350
CviAII CATG 6 cut(s) 355, 413, 670, 1012, 1101, 1411
CviQI GTAC 5 cut(s) 470, 696, 998, 1084, 1350
DdeI CTNAG 4 cut(s) 115, 637, 1091, 1249
DpnI GATC 2 cut(s) 765, 1130
DpnII GATC 2 cut(s) 763, 1128
Eam1104I CTCTTC 2 cut(s) 33, 380
EarI CTCTTC 2 cut(s) 33, 380
Eco130I CCWWGG 2 cut(s) 82, 412
Eco31I GGTCTC 1 cut(s) 638
Eco32I GATATC 2 cut(s) 483, 494
Eco47I GGWCC 3 cut(s) 119, 851, 982
Eco57I CTGAAG 1 cut(s) 1329
EcoO109I RGGNCCY 1 cut(s) 119
EcoRII CCWGG 2 cut(s) 236, 871
EcoRV GATATC 2 cut(s) 483, 494
EcoT14I CCWWGG 2 cut(s) 82, 412
EcoT22I ATGCAT 2 cut(s) 1102, 1106
ErhI CCWWGG 2 cut(s) 82, 412
Esp3I CGTCTC 2 cut(s) 45, 51
FaeI CATG 6 cut(s) 358, 416, 673, 1015, 1104, 1414
FalI AAGNNNNNCTT 2 cut(s) 342, 374
FaqI GGGAC 1 cut(s) 1264
FatI CATG 6 cut(s) 354, 412, 669, 1011, 1100, 1410
FauNDI CATATG 1 cut(s) 433
FblI GTMKAC 1 cut(s) 543
Fnu4HI GCNGC 3 cut(s) 857, 927, 1233
FokI GGATG 5 cut(s) 64, 205, 786, 1210, 1216
Fsp4HI GCNGC 3 cut(s) 857, 927, 1233
FspBI CTAG 5 cut(s) 308, 464, 564, 1058, 1355
GlaI GCGC 2 cut(s) 668, 1212
GluI GCNGC 3 cut(s) 857, 927, 1233
GsuI CTGGAG 1 cut(s) 225
HaeIII GGCC 1 cut(s) 168
HapII CCGG 1 cut(s) 8
HhaI GCGC 2 cut(s) 669, 1213
Hin1I GRCGYC 2 cut(s) 18, 156
Hin1II CATG 6 cut(s) 358, 416, 673, 1015, 1104, 1414
Hin6I GCGC 2 cut(s) 667, 1211
HinP1I GCGC 2 cut(s) 667, 1211
HincII GTYRAC 3 cut(s) 196, 529, 544
HindII GTYRAC 3 cut(s) 196, 529, 544
HinfI GANTC 3 cut(s) 71, 545, 906
HpaI GTTAAC 1 cut(s) 529
HpaII CCGG 1 cut(s) 8
HphI GGTGA 5 cut(s) 26, 93, 163, 791, 1336
Hpy188I TCNGA 4 cut(s) 126, 449, 514, 921
Hpy188III TCNNGA 2 cut(s) 316, 842
Hpy99I CGWCG 2 cut(s) 23, 158
HpyAV CCTTC 2 cut(s) 105, 114
HpyCH4III ACNGT 5 cut(s) 175, 1002, 1083, 1183, 1434
HpyCH4IV ACGT 3 cut(s) 18, 156, 457
HpyF10VI GCNNNNNNNGC 4 cut(s) 209, 958, 1101, 1232
HpyF3I CTNAG 4 cut(s) 115, 637, 1091, 1249
HpySE526I ACGT 3 cut(s) 18, 156, 457
Hsp92I GRCGYC 2 cut(s) 18, 156
Hsp92II CATG 6 cut(s) 358, 416, 673, 1015, 1104, 1414
HspAI GCGC 2 cut(s) 667, 1211
KpnI GGTACC 1 cut(s) 1353
KspAI GTTAAC 1 cut(s) 529
Kzo9I GATC 2 cut(s) 763, 1128
LmnI GCTCC 6 cut(s) 28, 209, 667, 1115, 1218, 1304
Lsp1109I GCAGC 3 cut(s) 843, 913, 1219
LweI GCATC 4 cut(s) 150, 190, 1044, 1127
MaeI CTAG 5 cut(s) 308, 464, 564, 1058, 1355
MaeII ACGT 3 cut(s) 18, 156, 457
MaeIII GTNAC 4 cut(s) 247, 390, 931, 1238
MalI GATC 2 cut(s) 765, 1130
MboI GATC 2 cut(s) 763, 1128
MboII GAAGA 8 cut(s) 20, 23, 151, 367, 722, 825, 1008, 1135
MhlI GDGCHC 2 cut(s) 608, 963
MluCI AATT 4 cut(s) 87, 835, 865, 1342
MlyI GAGTC 1 cut(s) 539
MmeI TCCRAC 3 cut(s) 132, 149, 492
Mph1103I ATGCAT 2 cut(s) 1102, 1106
MseI TTAA 6 cut(s) 428, 528, 834, 911, 978, 1133
MspA1I CMGCKG 1 cut(s) 856
MspCI CTTAAG 2 cut(s) 910, 1132
MspI CCGG 1 cut(s) 8
MspR9I CCNGG 2 cut(s) 238, 873
Mva1269I GAATGC 3 cut(s) 311, 830, 1213
MvaI CCWGG 2 cut(s) 238, 873
MvnI CGCG 2 cut(s) 667, 768
MwoI GCNNNNNNNGC 4 cut(s) 209, 958, 1101, 1232
NcoI CCATGG 1 cut(s) 412
NdeI CATATG 1 cut(s) 433
NdeII GATC 2 cut(s) 763, 1128
NlaIII CATG 6 cut(s) 358, 416, 673, 1015, 1104, 1414
NlaIV GGNNCC 2 cut(s) 881, 1351
NmuCI GTSAC 1 cut(s) 1238
NsiI ATGCAT 2 cut(s) 1102, 1106
NspI RCATGY 2 cut(s) 1015, 1104
PaeI GCATGC 1 cut(s) 1104
PaqCI CACCTGC 1 cut(s) 1312
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PctI GAATGC 3 cut(s) 311, 830, 1213
PfeI GAWTC 2 cut(s) 71, 906
PkrI GCNGC 3 cut(s) 858, 928, 1234
Ple19I CGATCG 1 cut(s) 766
PleI GAGTC 1 cut(s) 539
PpsI GAGTC 1 cut(s) 539
PpuMI RGGWCCY 1 cut(s) 119
PshBI ATTAAT 1 cut(s) 834
Psp5II RGGWCCY 1 cut(s) 119
Psp6I CCWGG 2 cut(s) 236, 871
PspGI CCWGG 2 cut(s) 236, 871
PspN4I GGNNCC 2 cut(s) 881, 1351
PspPI GGNCC 3 cut(s) 119, 851, 982
PspPPI RGGWCCY 1 cut(s) 119
PstI CTGCAG 1 cut(s) 1323
PvuI CGATCG 1 cut(s) 766
RsaI GTAC 5 cut(s) 471, 697, 999, 1085, 1351
RsaNI GTAC 5 cut(s) 470, 696, 998, 1084, 1350
SalI GTCGAC 1 cut(s) 542
SaqAI TTAA 6 cut(s) 428, 528, 834, 911, 978, 1133
SatI GCNGC 3 cut(s) 857, 927, 1233
Sau3AI GATC 2 cut(s) 763, 1128
Sau96I GGNCC 3 cut(s) 119, 851, 982
SchI GAGTC 1 cut(s) 539
ScrFI CCNGG 2 cut(s) 238, 873
SduI GDGCHC 2 cut(s) 608, 963
SfaNI GCATC 4 cut(s) 150, 190, 1044, 1127
SfcI CTRYAG 4 cut(s) 40, 473, 594, 1319
SinI GGWCC 3 cut(s) 119, 851, 982
SmlI CTYRAG 3 cut(s) 910, 1132, 1370
SmoI CTYRAG 3 cut(s) 910, 1132, 1370
SphI GCATGC 1 cut(s) 1104
Sse9I AATT 4 cut(s) 87, 835, 865, 1342
SsiI CCGC 2 cut(s) 665, 854
SspMI CTAG 5 cut(s) 308, 464, 564, 1058, 1355
StyD4I CCNGG 2 cut(s) 236, 871
StyI CCWWGG 2 cut(s) 82, 412
TaaI ACNGT 5 cut(s) 175, 1002, 1083, 1183, 1434
TaiI ACGT 3 cut(s) 21, 159, 460
TaqI TCGA 4 cut(s) 153, 485, 543, 762
TasI AATT 4 cut(s) 87, 835, 865, 1342
TatI WGTACW 2 cut(s) 469, 1083
TfiI GAWTC 2 cut(s) 71, 906
Tru1I TTAA 6 cut(s) 428, 528, 834, 911, 978, 1133
Tru9I TTAA 6 cut(s) 428, 528, 834, 911, 978, 1133
TscAI CASTG 4 cut(s) 555, 587, 1086, 1095
TseFI GTSAC 1 cut(s) 1238
TseI GCWGC 3 cut(s) 856, 926, 1232
Tsp45I GTSAC 1 cut(s) 1238
TspDTI ATGAA 4 cut(s) 87, 672, 1220, 1427
TspGWI ACGGA 4 cut(s) 69, 75, 152, 289
TspRI CASTG 4 cut(s) 555, 587, 1086, 1095
Vha464I CTTAAG 2 cut(s) 910, 1132
VpaK11BI GGWCC 3 cut(s) 119, 851, 982
VspI ATTAAT 1 cut(s) 834
XceI RCATGY 2 cut(s) 1015, 1104
XmiI GTMKAC 1 cut(s) 543
XspI CTAG 5 cut(s) 308, 464, 564, 1058, 1355
ZraI GACGTC 2 cut(s) 19, 157
Zsp2I ATGCAT 2 cut(s) 1102, 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.