Rorug07G0348900

Heparan-alpha-glucosaminide N-acetyltransferase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
38584406 .. 38584612
207 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0348900.1

Sequence Viewer

Length: 207 bp
ATGAAGGATCTGCAAGACCTCAATTTTATCATCCAACTCAACCTCATGGAGGTTGAAATCAAGCAGCTAGCTGCCAATGAGCAAAAGCATGAGGAAAACCAGGAGAACCAGCTCAAGCAGGTGCAAGCTGACCCAACTGCTGTTGAACTCGGCCTGACGACATGGAGTGCATTTGGGGAGGAAACCAACAAAGGTGTGGAGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

68

Amino Acids

7.77

Weight (kDa)

4.31

Isoelectric Point (pI)

32.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 109
Acc36I ACCTGC 1 cut(s) 109
AclWI GGATC 1 cut(s) 15
AfiI CCNNNNNNNGG 1 cut(s) 49
AgsI TTSAA 2 cut(s) 56, 146
AjnI CCWGG 1 cut(s) 99
AluBI AGCT 4 cut(s) 67, 71, 112, 128
AluI AGCT 4 cut(s) 67, 71, 112, 128
AlwI GGATC 1 cut(s) 15
AoxI GGCC 1 cut(s) 151
ApeKI GCWGC 2 cut(s) 64, 71
AsuNHI GCTAGC 1 cut(s) 67
BbvI GCAGC 2 cut(s) 58, 76
BciT130I CCWGG 1 cut(s) 101
BfaI CTAG 1 cut(s) 68
BfuAI ACCTGC 1 cut(s) 109
BisI GCNGC 2 cut(s) 65, 72
BlsI GCNGC 2 cut(s) 66, 73
Bme1390I CCNGG 1 cut(s) 101
BmrFI CCNGG 1 cut(s) 101
BmtI GCTAGC 1 cut(s) 71
BpuEI CTTGAG 1 cut(s) 98
Bsc4I CCNNNNNNNGG 1 cut(s) 49
BseBI CCWGG 1 cut(s) 101
BseGI GGATG 1 cut(s) 30
BseLI CCNNNNNNNGG 1 cut(s) 49
BseXI GCAGC 2 cut(s) 58, 76
BshFI GGCC 1 cut(s) 153
BslI CCNNNNNNNGG 1 cut(s) 49
BsnI GGCC 1 cut(s) 153
Bsp143I GATC 1 cut(s) 7
BspANI GGCC 1 cut(s) 153
BspMI ACCTGC 1 cut(s) 109
BspOI GCTAGC 1 cut(s) 71
BspPI GGATC 1 cut(s) 15
BssMI GATC 1 cut(s) 7
Bst2UI CCWGG 1 cut(s) 101
BstC8I GCNNGC 2 cut(s) 69, 126
BstENI CCTNNNNNAGG 1 cut(s) 47
BstF5I GGATG 1 cut(s) 30
BstKTI GATC 1 cut(s) 10
BstMBI GATC 1 cut(s) 7
BstNI CCWGG 1 cut(s) 101
BstSCI CCNGG 1 cut(s) 99
BstV1I GCAGC 2 cut(s) 58, 76
BstX2I RGATCY 1 cut(s) 7
BstYI RGATCY 1 cut(s) 7
BsuRI GGCC 1 cut(s) 153
BtsCI GGATG 1 cut(s) 30
BveI ACCTGC 1 cut(s) 109
Cac8I GCNNGC 2 cut(s) 69, 126
CviAII CATG 3 cut(s) 46, 89, 162
CviJI RGCY 5 cut(s) 67, 71, 112, 128, 153
CviKI_1 RGCY 5 cut(s) 67, 71, 112, 128, 153
DpnI GATC 1 cut(s) 9
DpnII GATC 1 cut(s) 7
EcoNI CCTNNNNNAGG 1 cut(s) 47
EcoRII CCWGG 1 cut(s) 99
FaeI CATG 3 cut(s) 49, 92, 165
FaiI YATR 3 cut(s) 47, 90, 163
FatI CATG 3 cut(s) 45, 88, 161
Fnu4HI GCNGC 2 cut(s) 65, 72
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 2 cut(s) 65, 72
FspBI CTAG 1 cut(s) 68
GluI GCNGC 2 cut(s) 65, 72
HaeIII GGCC 1 cut(s) 153
Hin1II CATG 3 cut(s) 49, 92, 165
HpyCH4V TGCA 3 cut(s) 13, 124, 170
Hsp92II CATG 3 cut(s) 49, 92, 165
Kzo9I GATC 1 cut(s) 7
LmnI GCTCC 1 cut(s) 199
LpnPI CCDG 5 cut(s) 86, 104, 113, 122, 167
Lsp1109I GCAGC 2 cut(s) 58, 76
MaeI CTAG 1 cut(s) 68
MalI GATC 1 cut(s) 9
MboI GATC 1 cut(s) 7
MflI RGATCY 1 cut(s) 7
MluCI AATT 1 cut(s) 22
MmeI TCCRAC 1 cut(s) 58
MnlI CCTC 5 cut(s) 29, 43, 53, 85, 172
MspR9I CCNGG 1 cut(s) 101
MvaI CCWGG 1 cut(s) 101
NdeII GATC 1 cut(s) 7
NheI GCTAGC 1 cut(s) 67
NlaIII CATG 3 cut(s) 49, 92, 165
NmeAIII GCCGAG 1 cut(s) 129
PaqCI CACCTGC 1 cut(s) 109
PkrI GCNGC 2 cut(s) 66, 73
Psp6I CCWGG 1 cut(s) 99
PspGI CCWGG 1 cut(s) 99
PsuI RGATCY 1 cut(s) 7
SatI GCNGC 2 cut(s) 65, 72
Sau3AI GATC 1 cut(s) 7
ScrFI CCNGG 1 cut(s) 101
SetI ASST 9 cut(s) 21, 45, 54, 69, 73, 114, 123, 130, 196
SmlI CTYRAG 1 cut(s) 113
SmoI CTYRAG 1 cut(s) 113
Sse9I AATT 1 cut(s) 22
SspMI CTAG 1 cut(s) 68
StyD4I CCNGG 1 cut(s) 99
TasI AATT 1 cut(s) 22
TseI GCWGC 2 cut(s) 64, 71
TspDTI ATGAA 1 cut(s) 17
XagI CCTNNNNNAGG 1 cut(s) 47
XcmI CCANNNNNNNNNTGG 1 cut(s) 193
XspI CTAG 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.