Rh7DG488700

Heparan-alpha-glucosaminide N-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0005188
Physical Location & Seq
Reverse (-)
69342193 .. 69346547
4355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG488700.1

Sequence Viewer

Length: 1449 bp
ATGTCTCCGGTCATTGACGTCGCTCCTCTTCTTCACCCCTACAGAGACAGAGACGGAGACGGAGACGGAGACGGAGAGAGAGATTCGTCATCCCAAGGAATTGTTCCTTCATCACCTTCCAACGGCTCAGGTCCTCCGACACCTAATCAACGCATCGCCTCACTCGACGTCTTCCGTGGCCTCACCGTTGCGTTGATGATTTTGGTTGACGATGCTGGAGGAGCTTTCCCATCCATAAATCACTCTCCCTGGTTCGGTGTTACACTTGCAGATTTTGTAATGCCATTTTTCCTGTTTCTTGTTGGTGTCTCCGTTGGTCTAGCATTCAAGAAAATATCAAACAAGACAACTGCCACCAAGAAAGTCATGCTTCGTGCAGTAAATCTCTTCCTCTTGGGGTTGTTACTGCAAGGTGGGTATTTCCATGGGCGTAAACACTTAACATATGGAGTTGATGTCAGAAACATACGTTGGCTAGGTGTACTACAGAGGATATCGATTGGATATCTGTTGGCTTCAATGTCGGAAATCTGGCTTGTTAACAACATAATGGTCGACTCACTGGTTGGTTTCGCTAGGAAATACTACATTCAGTGGTTGTTAGCTATAGGATTGTGCTCATTTTATATGAGCTTGCTGTATGGTCTCTTAGTTCCAAGTTGGGAATATGAAGCTCCACGCATGGATTTGTCTGCTCTTACCTCTGGTACTCAAACTATTTATTGTGATGTGAGAAGCAGTCTTCAACCTCCTTGCAATGCTGTTGGTTTTATCGATCGCGTTATTTTGGGTGAACATCATCTTTACCAACATCCCGTTTACAGAAGAACAAAGGAATGCAGTATTAATTCTCCCGACTATGGACCGCTGCCACCTAATTCTCCTGGCTGGTGCCTTGCACCATTTGACCCAGAGGGAATCTTAAGCTCTCTGATGGCTGCTGTTACTTGTTTTGTGGGATTGCATTTTGGGCACATATTATTGCATTTTAAGGACCAAAACCAGAGGGTACTGTTATGGTGCATGTCTTCCTTTCCTATTCTAATCTTTGGTTTTGTTTTGGAGATGCTAGGTATTCCTTTCTGTAAACCACTGTACACACTGAGCTATGCATGCATTACAGCAGGAGCATCAGGCTTGATCTTAAGTATTATCTTCTACATAGTTGATGTCAAACATTGCAGAAAGCCCACAGTATTGTTGCAATGGATGGGGATGAATGCACTCCTTATATATGCTTTTGCTGCTTGTGACCTTCTCTCAGTAGGATTGCAAGGTTTCTATTGGCAGTCCCCTGAAAACAACTTGGTTGATGGAGCTGAAGCATTACTGCAGGTGATAGTCCACTCAAAGAATTGGGGTACCCTAGTGTTTGTAATACTTGAGATTTTATTTTGGGGTCTTATTTCTGGTATTTTACACATGAAAGGCGTATATATAAAACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00531 ko01100 ko04142 map00531 map01100 map04142
Pfam Domains
Protein Families
DUF1624

Protein Analysis

482

Amino Acids

53.38

Weight (kDa)

7.18

Isoelectric Point (pI)

47.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HGSNAT_cat PF07786 51 - 197 3.9e-07 Heparan-alpha-glucosaminide N-acetyltransferase, catalytic
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1324
AatII GACGTC 2 cut(s) 21, 171
Acc36I ACCTGC 1 cut(s) 1324
Acc65I GGTACC 1 cut(s) 1361
AccB1I GGYRCC 2 cut(s) 891, 1361
AccI GTMKAC 1 cut(s) 555
AccII CGCG 1 cut(s) 780
AciI CCGC 1 cut(s) 866
AcuI CTGAAG 1 cut(s) 1341
AcyI GRCGYC 2 cut(s) 18, 168
AfaI GTAC 5 cut(s) 483, 709, 1011, 1097, 1363
AfiI CCNNNNNNNGG 3 cut(s) 122, 254, 860
AflII CTTAAG 2 cut(s) 922, 1144
AgsI TTSAA 3 cut(s) 328, 519, 746
AjnI CCWGG 2 cut(s) 248, 883
AjuI GAANNNNNNNTTGG 4 cut(s) 87, 119, 454, 486
AluBI AGCT 7 cut(s) 224, 605, 633, 674, 927, 1107, 1319
AluI AGCT 7 cut(s) 224, 605, 633, 674, 927, 1107, 1319
Alw21I GWGCWC 1 cut(s) 620
Alw26I GTCTC 8 cut(s) 9, 39, 45, 51, 57, 63, 313, 650
AoxI GGCC 1 cut(s) 178
ApeKI GCWGC 3 cut(s) 868, 938, 1244
AseI ATTAAT 1 cut(s) 846
Asp718I GGTACC 1 cut(s) 1361
AspS9I GGNCC 3 cut(s) 131, 863, 994
AsuHPI GGTGA 5 cut(s) 26, 105, 175, 803, 1348
AvaII GGWCC 3 cut(s) 131, 863, 994
BaeGI GKGCMC 1 cut(s) 975
BaeI ACNNNNGTAYC 2 cut(s) 1353, 1386
BanI GGYRCC 2 cut(s) 891, 1361
BbsI GAAGAC 3 cut(s) 163, 734, 1020
Bbv12I GWGCWC 1 cut(s) 620
BbvI GCAGC 3 cut(s) 855, 925, 1231
BccI CCATC 4 cut(s) 238, 928, 1204, 1307
BceAI ACGGC 1 cut(s) 139
BciT130I CCWGG 2 cut(s) 250, 885
BcoDI GTCTC 8 cut(s) 9, 39, 45, 51, 57, 63, 313, 650
BfaI CTAG 5 cut(s) 320, 476, 576, 1070, 1367
BfmI CTRYAG 4 cut(s) 40, 485, 606, 1331
BfrI CTTAAG 2 cut(s) 922, 1144
BfuAI ACCTGC 1 cut(s) 1324
BisI GCNGC 3 cut(s) 869, 939, 1245
BlsI GCNGC 3 cut(s) 870, 940, 1246
Bme1390I CCNGG 2 cut(s) 250, 885
Bme18I GGWCC 3 cut(s) 131, 863, 994
BmgT120I GGNCC 3 cut(s) 131, 863, 994
BmiI GGNNCC 2 cut(s) 893, 1363
BmrFI CCNGG 2 cut(s) 250, 885
BmsI GCATC 4 cut(s) 162, 202, 1056, 1139
BpiI GAAGAC 3 cut(s) 163, 734, 1020
BpmI CTGGAG 1 cut(s) 237
Bpu10I CCTNAGC 1 cut(s) 127
BpuEI CTTGAG 1 cut(s) 1403
Bsa29I ATCGAT 2 cut(s) 497, 774
BsaHI GRCGYC 2 cut(s) 18, 168
BsaI GGTCTC 1 cut(s) 650
BsaJI CCNNGG 4 cut(s) 94, 175, 248, 424
BsaWI WCCGGW 1 cut(s) 7
BsaXI ACNNNNNCTCC 2 cut(s) 441, 471
Bsc4I CCNNNNNNNGG 3 cut(s) 122, 254, 860
Bse1I ACTGG 1 cut(s) 567
Bse3DI GCAATG 3 cut(s) 763, 1177, 1211
BseBI CCWGG 2 cut(s) 250, 885
BseCI ATCGAT 2 cut(s) 497, 774
BseDI CCNNGG 4 cut(s) 94, 175, 248, 424
BseGI GGATG 5 cut(s) 89, 230, 811, 1215, 1221
BseLI CCNNNNNNNGG 3 cut(s) 122, 254, 860
BseMI GCAATG 3 cut(s) 763, 1177, 1211
BseMII CTCAG 3 cut(s) 141, 1094, 1275
BseNI ACTGG 1 cut(s) 567
BseRI GAGGAG 2 cut(s) 15, 234
BseSI GKGCMC 1 cut(s) 975
BseXI GCAGC 3 cut(s) 855, 925, 1231
BsgI GTGCAG 1 cut(s) 396
Bsh1236I CGCG 1 cut(s) 780
Bsh1285I CGRYCG 1 cut(s) 778
BshFI GGCC 1 cut(s) 180
BshNI GGYRCC 2 cut(s) 891, 1361
BshVI ATCGAT 2 cut(s) 497, 774
BsiEI CGRYCG 1 cut(s) 778
BsiHKAI GWGCWC 1 cut(s) 620
BsiSI CCGG 1 cut(s) 8
BslFI GGGAC 1 cut(s) 1276
BslI CCNNNNNNNGG 3 cut(s) 122, 254, 860
BsmAI GTCTC 8 cut(s) 9, 39, 45, 51, 57, 63, 313, 650
BsmBI CGTCTC 4 cut(s) 45, 51, 57, 63
BsmFI GGGAC 1 cut(s) 1276
BsmI GAATGC 3 cut(s) 323, 842, 1225
BsnI GGCC 1 cut(s) 180
Bso31I GGTCTC 1 cut(s) 650
Bsp1286I GDGCHC 2 cut(s) 620, 975
Bsp1407I TGTACA 1 cut(s) 1095
Bsp143I GATC 2 cut(s) 775, 1140
Bsp19I CCATGG 1 cut(s) 424
BspACI CCGC 1 cut(s) 866
BspANI GGCC 1 cut(s) 180
BspCNI CTCAG 3 cut(s) 140, 1095, 1274
BspDI ATCGAT 2 cut(s) 497, 774
BspFNI CGCG 1 cut(s) 780
BspLI GGNNCC 2 cut(s) 893, 1363
BspMAI CTGCAG 1 cut(s) 1335
BspMI ACCTGC 1 cut(s) 1324
BspT107I GGYRCC 2 cut(s) 891, 1361
BspTI CTTAAG 2 cut(s) 922, 1144
BspTNI GGTCTC 1 cut(s) 650
BsrDI GCAATG 3 cut(s) 763, 1177, 1211
BsrGI TGTACA 1 cut(s) 1095
BsrI ACTGG 1 cut(s) 567
BssECI CCNNGG 4 cut(s) 94, 175, 248, 424
BssMI GATC 2 cut(s) 775, 1140
BssNI GRCGYC 2 cut(s) 18, 168
BssT1I CCWWGG 2 cut(s) 94, 424
Bst2UI CCWGG 2 cut(s) 250, 885
Bst4CI ACNGT 5 cut(s) 187, 1014, 1095, 1195, 1446
Bst6I CTCTTC 2 cut(s) 33, 392
BstACI GRCGYC 2 cut(s) 18, 168
BstAFI CTTAAG 2 cut(s) 922, 1144
BstAUI TGTACA 1 cut(s) 1095
BstC8I GCNNGC 2 cut(s) 635, 1114
BstDEI CTNAG 4 cut(s) 127, 649, 1103, 1261
BstDSI CCRYGG 2 cut(s) 175, 424
BstF5I GGATG 5 cut(s) 89, 230, 811, 1215, 1221
BstFNI CGCG 1 cut(s) 780
BstKTI GATC 2 cut(s) 778, 1143
BstMAI GTCTC 8 cut(s) 9, 39, 45, 51, 57, 63, 313, 650
BstMBI GATC 2 cut(s) 775, 1140
BstMCI CGRYCG 1 cut(s) 778
BstMWI GCNNNNNNNGC 4 cut(s) 221, 970, 1113, 1244
BstNI CCWGG 2 cut(s) 250, 885
BstNSI RCATGY 2 cut(s) 1027, 1116
BstSCI CCNGG 2 cut(s) 248, 883
BstSFI CTRYAG 4 cut(s) 40, 485, 606, 1331
BstSLI GKGCMC 1 cut(s) 975
BstUI CGCG 1 cut(s) 780
BstV1I GCAGC 3 cut(s) 855, 925, 1231
BstV2I GAAGAC 3 cut(s) 163, 734, 1020
Bsu15I ATCGAT 2 cut(s) 497, 774
BsuRI GGCC 1 cut(s) 180
BsuTUI ATCGAT 2 cut(s) 497, 774
BtgI CCRYGG 2 cut(s) 175, 424
BtgZI GCGATG 1 cut(s) 139
BtsCI GGATG 5 cut(s) 89, 230, 811, 1215, 1221
BtsIMutI CAGTG 4 cut(s) 560, 599, 1091, 1100
BveI ACCTGC 1 cut(s) 1324
Cac8I GCNNGC 2 cut(s) 635, 1114
Cfr13I GGNCC 3 cut(s) 131, 863, 994
ClaI ATCGAT 2 cut(s) 497, 774
Csp6I GTAC 5 cut(s) 482, 708, 1010, 1096, 1362
CviAII CATG 6 cut(s) 367, 425, 682, 1024, 1113, 1423
CviQI GTAC 5 cut(s) 482, 708, 1010, 1096, 1362
DdeI CTNAG 4 cut(s) 127, 649, 1103, 1261
DpnI GATC 2 cut(s) 777, 1142
DpnII GATC 2 cut(s) 775, 1140
Eam1104I CTCTTC 2 cut(s) 33, 392
EarI CTCTTC 2 cut(s) 33, 392
Eco130I CCWWGG 2 cut(s) 94, 424
Eco31I GGTCTC 1 cut(s) 650
Eco32I GATATC 2 cut(s) 495, 506
Eco47I GGWCC 3 cut(s) 131, 863, 994
Eco57I CTGAAG 1 cut(s) 1341
EcoO109I RGGNCCY 1 cut(s) 131
EcoRII CCWGG 2 cut(s) 248, 883
EcoRV GATATC 2 cut(s) 495, 506
EcoT14I CCWWGG 2 cut(s) 94, 424
EcoT22I ATGCAT 2 cut(s) 1114, 1118
ErhI CCWWGG 2 cut(s) 94, 424
Esp3I CGTCTC 4 cut(s) 45, 51, 57, 63
FaeI CATG 6 cut(s) 370, 428, 685, 1027, 1116, 1426
FalI AAGNNNNNCTT 2 cut(s) 354, 386
FaqI GGGAC 1 cut(s) 1276
FatI CATG 6 cut(s) 366, 424, 681, 1023, 1112, 1422
FauNDI CATATG 1 cut(s) 445
FblI GTMKAC 1 cut(s) 555
Fnu4HI GCNGC 3 cut(s) 869, 939, 1245
FokI GGATG 5 cut(s) 76, 217, 798, 1222, 1228
Fsp4HI GCNGC 3 cut(s) 869, 939, 1245
FspBI CTAG 5 cut(s) 320, 476, 576, 1070, 1367
GluI GCNGC 3 cut(s) 869, 939, 1245
GsuI CTGGAG 1 cut(s) 237
HaeIII GGCC 1 cut(s) 180
HapII CCGG 1 cut(s) 8
Hin1I GRCGYC 2 cut(s) 18, 168
Hin1II CATG 6 cut(s) 370, 428, 685, 1027, 1116, 1426
HincII GTYRAC 3 cut(s) 208, 541, 556
HindII GTYRAC 3 cut(s) 208, 541, 556
HinfI GANTC 3 cut(s) 83, 557, 918
HpaI GTTAAC 1 cut(s) 541
HpaII CCGG 1 cut(s) 8
HphI GGTGA 5 cut(s) 26, 105, 175, 803, 1348
Hpy188I TCNGA 4 cut(s) 138, 461, 526, 933
Hpy188III TCNNGA 2 cut(s) 328, 854
Hpy99I CGWCG 2 cut(s) 23, 170
HpyAV CCTTC 3 cut(s) 117, 126, 1265
HpyCH4III ACNGT 5 cut(s) 187, 1014, 1095, 1195, 1446
HpyCH4IV ACGT 3 cut(s) 18, 168, 469
HpyF10VI GCNNNNNNNGC 4 cut(s) 221, 970, 1113, 1244
HpyF3I CTNAG 4 cut(s) 127, 649, 1103, 1261
HpySE526I ACGT 3 cut(s) 18, 168, 469
Hsp92I GRCGYC 2 cut(s) 18, 168
Hsp92II CATG 6 cut(s) 370, 428, 685, 1027, 1116, 1426
KpnI GGTACC 1 cut(s) 1365
KspAI GTTAAC 1 cut(s) 541
Kzo9I GATC 2 cut(s) 775, 1140
LmnI GCTCC 5 cut(s) 28, 221, 679, 1127, 1316
Lsp1109I GCAGC 3 cut(s) 855, 925, 1231
LweI GCATC 4 cut(s) 162, 202, 1056, 1139
MaeI CTAG 5 cut(s) 320, 476, 576, 1070, 1367
MaeII ACGT 3 cut(s) 18, 168, 469
MaeIII GTNAC 4 cut(s) 259, 402, 943, 1250
MalI GATC 2 cut(s) 777, 1142
MboI GATC 2 cut(s) 775, 1140
MboII GAAGA 8 cut(s) 20, 23, 163, 379, 734, 837, 1020, 1147
MhlI GDGCHC 2 cut(s) 620, 975
MluCI AATT 4 cut(s) 99, 847, 877, 1354
MlyI GAGTC 1 cut(s) 551
MmeI TCCRAC 3 cut(s) 144, 161, 504
Mph1103I ATGCAT 2 cut(s) 1114, 1118
MseI TTAA 6 cut(s) 440, 540, 846, 923, 990, 1145
MspA1I CMGCKG 1 cut(s) 868
MspCI CTTAAG 2 cut(s) 922, 1144
MspI CCGG 1 cut(s) 8
MspR9I CCNGG 2 cut(s) 250, 885
Mva1269I GAATGC 3 cut(s) 323, 842, 1225
MvaI CCWGG 2 cut(s) 250, 885
MvnI CGCG 1 cut(s) 780
MwoI GCNNNNNNNGC 4 cut(s) 221, 970, 1113, 1244
NcoI CCATGG 1 cut(s) 424
NdeI CATATG 1 cut(s) 445
NdeII GATC 2 cut(s) 775, 1140
NlaIII CATG 6 cut(s) 370, 428, 685, 1027, 1116, 1426
NlaIV GGNNCC 2 cut(s) 893, 1363
NmuCI GTSAC 1 cut(s) 1250
NsiI ATGCAT 2 cut(s) 1114, 1118
NspI RCATGY 2 cut(s) 1027, 1116
PaeI GCATGC 1 cut(s) 1116
PaqCI CACCTGC 1 cut(s) 1324
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PctI GAATGC 3 cut(s) 323, 842, 1225
PfeI GAWTC 2 cut(s) 83, 918
PkrI GCNGC 3 cut(s) 870, 940, 1246
Ple19I CGATCG 1 cut(s) 778
PleI GAGTC 1 cut(s) 551
PpsI GAGTC 1 cut(s) 551
PpuMI RGGWCCY 1 cut(s) 131
PshBI ATTAAT 1 cut(s) 846
Psp5II RGGWCCY 1 cut(s) 131
Psp6I CCWGG 2 cut(s) 248, 883
PspGI CCWGG 2 cut(s) 248, 883
PspN4I GGNNCC 2 cut(s) 893, 1363
PspPI GGNCC 3 cut(s) 131, 863, 994
PspPPI RGGWCCY 1 cut(s) 131
PstI CTGCAG 1 cut(s) 1335
PvuI CGATCG 1 cut(s) 778
RsaI GTAC 5 cut(s) 483, 709, 1011, 1097, 1363
RsaNI GTAC 5 cut(s) 482, 708, 1010, 1096, 1362
SalI GTCGAC 1 cut(s) 554
SaqAI TTAA 6 cut(s) 440, 540, 846, 923, 990, 1145
SatI GCNGC 3 cut(s) 869, 939, 1245
Sau3AI GATC 2 cut(s) 775, 1140
Sau96I GGNCC 3 cut(s) 131, 863, 994
SchI GAGTC 1 cut(s) 551
ScrFI CCNGG 2 cut(s) 250, 885
SduI GDGCHC 2 cut(s) 620, 975
SfaNI GCATC 4 cut(s) 162, 202, 1056, 1139
SfcI CTRYAG 4 cut(s) 40, 485, 606, 1331
SinI GGWCC 3 cut(s) 131, 863, 994
SmlI CTYRAG 3 cut(s) 922, 1144, 1382
SmoI CTYRAG 3 cut(s) 922, 1144, 1382
SphI GCATGC 1 cut(s) 1116
Sse9I AATT 4 cut(s) 99, 847, 877, 1354
SsiI CCGC 1 cut(s) 866
SspMI CTAG 5 cut(s) 320, 476, 576, 1070, 1367
StyD4I CCNGG 2 cut(s) 248, 883
StyI CCWWGG 2 cut(s) 94, 424
TaaI ACNGT 5 cut(s) 187, 1014, 1095, 1195, 1446
TaiI ACGT 3 cut(s) 21, 171, 472
TaqI TCGA 4 cut(s) 165, 497, 555, 774
TasI AATT 4 cut(s) 99, 847, 877, 1354
TatI WGTACW 2 cut(s) 481, 1095
TfiI GAWTC 2 cut(s) 83, 918
Tru1I TTAA 6 cut(s) 440, 540, 846, 923, 990, 1145
Tru9I TTAA 6 cut(s) 440, 540, 846, 923, 990, 1145
TscAI CASTG 4 cut(s) 567, 599, 1098, 1107
TseFI GTSAC 1 cut(s) 1250
TseI GCWGC 3 cut(s) 868, 938, 1244
Tsp45I GTSAC 1 cut(s) 1250
TspDTI ATGAA 4 cut(s) 99, 684, 1232, 1439
TspGWI ACGGA 6 cut(s) 69, 75, 81, 87, 164, 301
TspRI CASTG 4 cut(s) 567, 599, 1098, 1107
Vha464I CTTAAG 2 cut(s) 922, 1144
VpaK11BI GGWCC 3 cut(s) 131, 863, 994
VspI ATTAAT 1 cut(s) 846
XceI RCATGY 2 cut(s) 1027, 1116
XmiI GTMKAC 1 cut(s) 555
XspI CTAG 5 cut(s) 320, 476, 576, 1070, 1367
ZraI GACGTC 2 cut(s) 19, 169
Zsp2I ATGCAT 2 cut(s) 1114, 1118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.