Rh7CG520000

Heparan-alpha-glucosaminide N-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0005188
Physical Location & Seq
Reverse (-)
69858257 .. 69860977
2721 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG520000.1

Sequence Viewer

Length: 834 bp
ATGTCTCCGGTCATTGACGTCGCTCCTCTTCTTCACCCCTACAGAGACAGAGACAGAGACAGAGACGGAGACAGAGATACGTCATCACCTTCCAACGGCGCAGGTCCTCCGACACCTAATCAACGCATCGCCTCACTCGACGTCTTCCGTGGCCTCACCGTTGCGTTGATGATTTTGGTTGACGATGCTGGAGGAGCTTTCCCATCCATAAATCACTCTCCCTGGTTCGGTGTTACACTAGCAGATTTTGTAATGCCATTTTTCCTGTTTCTTGTTGGTGTCTCCGTTGGTCTAGCATTCAAGAAAATATCAAACAAGTCAACTGCCACCAAGAAAGTCATGCTTCGTGCAATAAATCTCTTCCTCTTGGGGTTGTTACTGCAAGGTGGGTATTTCCATGGGCGTAAACACTTAACATATGGAGTTGATGTTAGAAAGATACGTTGGCTAGGTGTACTACAGAGGATATCGATTGGATATCTGTTGGCTTCAATGTCGGAAATCTGGCTTGTTAACAACATAATGGTCGACTCACTGGTTGATTTCGCTAGGAAATACTACATTCAGTGGTTGTTTGCTATTGGATTGTGCTCATTTTATATGAGCTTGCTGTATGGTCTCTTAGTTCCAAGTTGGGAATATGAAGCTCCGCGCATGGATTTGTCTGCTCTTACCTCTGGTACTCAAACTATTTATTGTGATGTGAGAAGCAGTCTTCAACCTCCTTGCAATGCTGTTGGTTTTATCGATCGCGTTATTTTGGGTGAACATCATCTTTATCAACATCCCATTTACCGAAGAACAAAGGTCATTCTCCTAGGTCTTTACTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00531 ko01100 ko04142 map00531 map01100 map04142
Pfam Domains
Protein Families
DUF1624

Protein Analysis

277

Amino Acids

31.12

Weight (kDa)

9.22

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HGSNAT_cat PF07786 42 - 188 1.7e-07 Heparan-alpha-glucosaminide N-acetyltransferase, catalytic
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 21, 144
Acc36I ACCTGC 1 cut(s) 92
AccI GTMKAC 1 cut(s) 528
AccII CGCG 2 cut(s) 652, 753
AciI CCGC 1 cut(s) 650
AcyI GRCGYC 2 cut(s) 18, 141
AfaI GTAC 2 cut(s) 456, 682
AfiI CCNNNNNNNGG 2 cut(s) 95, 227
AgsI TTSAA 3 cut(s) 301, 492, 719
AjnI CCWGG 1 cut(s) 221
AjuI GAANNNNNNNTTGG 2 cut(s) 427, 459
AluBI AGCT 3 cut(s) 197, 606, 647
AluI AGCT 3 cut(s) 197, 606, 647
Alw21I GWGCWC 1 cut(s) 593
Alw26I GTCTC 8 cut(s) 9, 39, 45, 51, 57, 63, 286, 623
AoxI GGCC 1 cut(s) 151
AspA2I CCTAGG 1 cut(s) 817
AspLEI GCGC 2 cut(s) 101, 654
AspS9I GGNCC 1 cut(s) 104
AsuHPI GGTGA 4 cut(s) 26, 78, 148, 776
AvaII GGWCC 1 cut(s) 104
AvrII CCTAGG 1 cut(s) 817
BbsI GAAGAC 2 cut(s) 136, 707
Bbv12I GWGCWC 1 cut(s) 593
BccI CCATC 1 cut(s) 211
BceAI ACGGC 1 cut(s) 112
BciT130I CCWGG 1 cut(s) 223
BcoDI GTCTC 8 cut(s) 9, 39, 45, 51, 57, 63, 286, 623
BfaI CTAG 5 cut(s) 239, 293, 449, 549, 818
BfmI CTRYAG 2 cut(s) 40, 458
BfuAI ACCTGC 1 cut(s) 92
BlnI CCTAGG 1 cut(s) 817
Bme1390I CCNGG 1 cut(s) 223
Bme18I GGWCC 1 cut(s) 104
BmgT120I GGNCC 1 cut(s) 104
BmrFI CCNGG 1 cut(s) 223
BmsI GCATC 2 cut(s) 135, 175
BpiI GAAGAC 2 cut(s) 136, 707
BpmI CTGGAG 1 cut(s) 210
Bsa29I ATCGAT 2 cut(s) 470, 747
BsaHI GRCGYC 2 cut(s) 18, 141
BsaI GGTCTC 1 cut(s) 623
BsaJI CCNNGG 4 cut(s) 148, 221, 397, 817
BsaWI WCCGGW 1 cut(s) 7
BsaXI ACNNNNNCTCC 2 cut(s) 414, 444
Bsc4I CCNNNNNNNGG 2 cut(s) 95, 227
Bse1I ACTGG 1 cut(s) 540
Bse3DI GCAATG 1 cut(s) 736
BseBI CCWGG 1 cut(s) 223
BseCI ATCGAT 2 cut(s) 470, 747
BseDI CCNNGG 4 cut(s) 148, 221, 397, 817
BseGI GGATG 2 cut(s) 203, 784
BseLI CCNNNNNNNGG 2 cut(s) 95, 227
BseMI GCAATG 1 cut(s) 736
BseNI ACTGG 1 cut(s) 540
BseRI GAGGAG 2 cut(s) 15, 207
Bsh1236I CGCG 2 cut(s) 652, 753
Bsh1285I CGRYCG 1 cut(s) 751
BshFI GGCC 1 cut(s) 153
BshVI ATCGAT 2 cut(s) 470, 747
BsiEI CGRYCG 1 cut(s) 751
BsiHKAI GWGCWC 1 cut(s) 593
BsiSI CCGG 1 cut(s) 8
BslI CCNNNNNNNGG 2 cut(s) 95, 227
BsmAI GTCTC 8 cut(s) 9, 39, 45, 51, 57, 63, 286, 623
BsmBI CGTCTC 1 cut(s) 57
BsmI GAATGC 1 cut(s) 296
BsnI GGCC 1 cut(s) 153
Bso31I GGTCTC 1 cut(s) 623
Bsp1286I GDGCHC 1 cut(s) 593
Bsp143I GATC 1 cut(s) 748
Bsp19I CCATGG 1 cut(s) 397
BspACI CCGC 1 cut(s) 650
BspANI GGCC 1 cut(s) 153
BspDI ATCGAT 2 cut(s) 470, 747
BspFNI CGCG 2 cut(s) 652, 753
BspMI ACCTGC 1 cut(s) 92
BspTNI GGTCTC 1 cut(s) 623
BsrDI GCAATG 1 cut(s) 736
BsrI ACTGG 1 cut(s) 540
BssECI CCNNGG 4 cut(s) 148, 221, 397, 817
BssMI GATC 1 cut(s) 748
BssNI GRCGYC 2 cut(s) 18, 141
BssT1I CCWWGG 2 cut(s) 397, 817
Bst2UI CCWGG 1 cut(s) 223
Bst4CI ACNGT 1 cut(s) 160
Bst6I CTCTTC 2 cut(s) 33, 365
BstACI GRCGYC 2 cut(s) 18, 141
BstC8I GCNNGC 1 cut(s) 608
BstDEI CTNAG 1 cut(s) 622
BstDSI CCRYGG 2 cut(s) 148, 397
BstF5I GGATG 2 cut(s) 203, 784
BstFNI CGCG 2 cut(s) 652, 753
BstHHI GCGC 2 cut(s) 101, 654
BstKTI GATC 1 cut(s) 751
BstMAI GTCTC 8 cut(s) 9, 39, 45, 51, 57, 63, 286, 623
BstMBI GATC 1 cut(s) 748
BstMCI CGRYCG 1 cut(s) 751
BstMWI GCNNNNNNNGC 1 cut(s) 194
BstNI CCWGG 1 cut(s) 223
BstSCI CCNGG 1 cut(s) 221
BstSFI CTRYAG 2 cut(s) 40, 458
BstUI CGCG 2 cut(s) 652, 753
BstV2I GAAGAC 2 cut(s) 136, 707
Bsu15I ATCGAT 2 cut(s) 470, 747
BsuRI GGCC 1 cut(s) 153
BsuTUI ATCGAT 2 cut(s) 470, 747
BtgI CCRYGG 2 cut(s) 148, 397
BtgZI GCGATG 1 cut(s) 112
BtsCI GGATG 2 cut(s) 203, 784
BtsIMutI CAGTG 2 cut(s) 533, 572
BveI ACCTGC 1 cut(s) 92
Cac8I GCNNGC 1 cut(s) 608
CfoI GCGC 2 cut(s) 101, 654
Cfr13I GGNCC 1 cut(s) 104
ClaI ATCGAT 2 cut(s) 470, 747
Csp6I GTAC 2 cut(s) 455, 681
CviAII CATG 3 cut(s) 340, 398, 655
CviJI RGCY 7 cut(s) 153, 197, 448, 488, 508, 606, 647
CviKI_1 RGCY 7 cut(s) 153, 197, 448, 488, 508, 606, 647
CviQI GTAC 2 cut(s) 455, 681
DdeI CTNAG 1 cut(s) 622
DpnI GATC 1 cut(s) 750
DpnII GATC 1 cut(s) 748
Eam1104I CTCTTC 2 cut(s) 33, 365
EarI CTCTTC 2 cut(s) 33, 365
Eco130I CCWWGG 2 cut(s) 397, 817
Eco31I GGTCTC 1 cut(s) 623
Eco32I GATATC 2 cut(s) 468, 479
Eco47I GGWCC 1 cut(s) 104
EcoO109I RGGNCCY 1 cut(s) 104
EcoRII CCWGG 1 cut(s) 221
EcoRV GATATC 2 cut(s) 468, 479
EcoT14I CCWWGG 2 cut(s) 397, 817
ErhI CCWWGG 2 cut(s) 397, 817
Esp3I CGTCTC 1 cut(s) 57
FaeI CATG 3 cut(s) 343, 401, 658
FalI AAGNNNNNCTT 2 cut(s) 327, 359
FatI CATG 3 cut(s) 339, 397, 654
FauNDI CATATG 1 cut(s) 418
FblI GTMKAC 1 cut(s) 528
FokI GGATG 2 cut(s) 190, 771
FspBI CTAG 5 cut(s) 239, 293, 449, 549, 818
GlaI GCGC 2 cut(s) 100, 653
GsuI CTGGAG 1 cut(s) 210
HaeIII GGCC 1 cut(s) 153
HapII CCGG 1 cut(s) 8
HhaI GCGC 2 cut(s) 101, 654
Hin1I GRCGYC 2 cut(s) 18, 141
Hin1II CATG 3 cut(s) 343, 401, 658
Hin6I GCGC 2 cut(s) 99, 652
HinP1I GCGC 2 cut(s) 99, 652
HincII GTYRAC 4 cut(s) 181, 321, 514, 529
HindII GTYRAC 4 cut(s) 181, 321, 514, 529
HinfI GANTC 1 cut(s) 530
HpaI GTTAAC 1 cut(s) 514
HpaII CCGG 1 cut(s) 8
HphI GGTGA 4 cut(s) 26, 78, 148, 776
Hpy166II GTNNAC 7 cut(s) 181, 321, 407, 455, 514, 529, 767
Hpy188I TCNGA 2 cut(s) 111, 499
Hpy188III TCNNGA 1 cut(s) 301
Hpy8I GTNNAC 7 cut(s) 181, 321, 407, 455, 514, 529, 767
Hpy99I CGWCG 2 cut(s) 23, 143
HpyAV CCTTC 1 cut(s) 99
HpyCH4III ACNGT 1 cut(s) 160
HpyCH4IV ACGT 4 cut(s) 18, 80, 141, 442
HpyCH4V TGCA 3 cut(s) 350, 382, 729
HpyF10VI GCNNNNNNNGC 1 cut(s) 194
HpyF3I CTNAG 1 cut(s) 622
HpySE526I ACGT 4 cut(s) 18, 80, 141, 442
Hsp92I GRCGYC 2 cut(s) 18, 141
Hsp92II CATG 3 cut(s) 343, 401, 658
HspAI GCGC 2 cut(s) 99, 652
KspAI GTTAAC 1 cut(s) 514
Kzo9I GATC 1 cut(s) 748
LmnI GCTCC 3 cut(s) 28, 194, 652
LpnPI CCDG 9 cut(s) 21, 87, 174, 208, 235, 278, 490, 521, 663
LweI GCATC 2 cut(s) 135, 175
MaeI CTAG 5 cut(s) 239, 293, 449, 549, 818
MaeII ACGT 4 cut(s) 18, 80, 141, 442
MaeIII GTNAC 2 cut(s) 232, 375
MalI GATC 1 cut(s) 750
MboI GATC 1 cut(s) 748
MboII GAAGA 6 cut(s) 20, 23, 136, 352, 707, 810
MhlI GDGCHC 1 cut(s) 593
MlyI GAGTC 1 cut(s) 524
MmeI TCCRAC 3 cut(s) 117, 134, 477
MnlI CCTC 9 cut(s) 36, 117, 142, 164, 185, 374, 456, 685, 732
MseI TTAA 2 cut(s) 413, 513
MspI CCGG 1 cut(s) 8
MspR9I CCNGG 1 cut(s) 223
Mva1269I GAATGC 1 cut(s) 296
MvaI CCWGG 1 cut(s) 223
MvnI CGCG 2 cut(s) 652, 753
MwoI GCNNNNNNNGC 1 cut(s) 194
NcoI CCATGG 1 cut(s) 397
NdeI CATATG 1 cut(s) 418
NdeII GATC 1 cut(s) 748
NlaIII CATG 3 cut(s) 343, 401, 658
PcsI WCGNNNNNNNCGW 1 cut(s) 135
PctI GAATGC 1 cut(s) 296
Ple19I CGATCG 1 cut(s) 751
PleI GAGTC 1 cut(s) 524
PpsI GAGTC 1 cut(s) 524
PpuMI RGGWCCY 1 cut(s) 104
Psp5II RGGWCCY 1 cut(s) 104
Psp6I CCWGG 1 cut(s) 221
PspGI CCWGG 1 cut(s) 221
PspPI GGNCC 1 cut(s) 104
PspPPI RGGWCCY 1 cut(s) 104
PvuI CGATCG 1 cut(s) 751
RsaI GTAC 2 cut(s) 456, 682
RsaNI GTAC 2 cut(s) 455, 681
SalI GTCGAC 1 cut(s) 527
SaqAI TTAA 2 cut(s) 413, 513
Sau3AI GATC 1 cut(s) 748
Sau96I GGNCC 1 cut(s) 104
SchI GAGTC 1 cut(s) 524
ScrFI CCNGG 1 cut(s) 223
SduI GDGCHC 1 cut(s) 593
SfaNI GCATC 2 cut(s) 135, 175
SfcI CTRYAG 2 cut(s) 40, 458
SinI GGWCC 1 cut(s) 104
SsiI CCGC 1 cut(s) 650
SspMI CTAG 5 cut(s) 239, 293, 449, 549, 818
StyD4I CCNGG 1 cut(s) 221
StyI CCWWGG 2 cut(s) 397, 817
TaaI ACNGT 1 cut(s) 160
TaiI ACGT 4 cut(s) 21, 83, 144, 445
TaqI TCGA 4 cut(s) 138, 470, 528, 747
TatI WGTACW 1 cut(s) 454
Tru1I TTAA 2 cut(s) 413, 513
Tru9I TTAA 2 cut(s) 413, 513
TscAI CASTG 2 cut(s) 540, 572
TspDTI ATGAA 1 cut(s) 657
TspGWI ACGGA 3 cut(s) 81, 137, 274
TspRI CASTG 2 cut(s) 540, 572
VpaK11BI GGWCC 1 cut(s) 104
XmaJI CCTAGG 1 cut(s) 817
XmiI GTMKAC 1 cut(s) 528
XspI CTAG 5 cut(s) 239, 293, 449, 549, 818
ZraI GACGTC 2 cut(s) 19, 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.