RchiOBHm_Chr6g0256171

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
11495259 .. 11495450
192 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 192 bp
ATGCTTTCTTTCATTTTGCTAGTTGCTACCGATGTTGCTGCTAAGTTTGGAATTCCAAGGCTATATTTTCATGGAACTGGTTTCTTCCCCTTGTGTGCTTCATTGAGTGTGATGATATATCAACCTCACAGGAAGTTGTCAACTGACTCAGAATCTTTCGTGATTCCTAATCCCCAGATGAAATCAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

63

Amino Acids

7.08

Weight (kDa)

9.51

Isoelectric Point (pI)

24.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 51
ApeKI GCWGC 1 cut(s) 38
ApoI RAATTY 1 cut(s) 51
BbvI GCAGC 1 cut(s) 25
BcgI CGANNNNNNTGC 2 cut(s) 20, 54
BfaI CTAG 1 cut(s) 20
BisI GCNGC 1 cut(s) 39
BlsI GCNGC 1 cut(s) 40
BsaJI CCNNGG 1 cut(s) 56
Bse1I ACTGG 1 cut(s) 82
BseDI CCNNGG 1 cut(s) 56
BseMII CTCAG 1 cut(s) 162
BseNI ACTGG 1 cut(s) 82
BseXI GCAGC 1 cut(s) 25
BspCNI CTCAG 1 cut(s) 161
BsrI ACTGG 1 cut(s) 82
BssECI CCNNGG 1 cut(s) 56
BssT1I CCWWGG 1 cut(s) 56
BstDEI CTNAG 2 cut(s) 42, 148
BstV1I GCAGC 1 cut(s) 25
CviAII CATG 1 cut(s) 71
CviJI RGCY 1 cut(s) 61
CviKI_1 RGCY 1 cut(s) 61
DdeI CTNAG 2 cut(s) 42, 148
Eco130I CCWWGG 1 cut(s) 56
EcoRI GAATTC 1 cut(s) 51
EcoT14I CCWWGG 1 cut(s) 56
ErhI CCWWGG 1 cut(s) 56
FaeI CATG 1 cut(s) 74
FaiI YATR 3 cut(s) 64, 72, 118
FatI CATG 1 cut(s) 70
Fnu4HI GCNGC 1 cut(s) 39
Fsp4HI GCNGC 1 cut(s) 39
FspBI CTAG 1 cut(s) 20
GluI GCNGC 1 cut(s) 39
Hin1II CATG 1 cut(s) 74
HincII GTYRAC 1 cut(s) 141
HindII GTYRAC 1 cut(s) 141
HinfI GANTC 3 cut(s) 146, 152, 163
Hpy166II GTNNAC 1 cut(s) 141
Hpy188I TCNGA 1 cut(s) 151
Hpy188III TCNNGA 2 cut(s) 160, 186
Hpy8I GTNNAC 1 cut(s) 141
HpyF3I CTNAG 2 cut(s) 42, 148
Hsp92II CATG 1 cut(s) 74
LpnPI CCDG 3 cut(s) 63, 115, 188
Lsp1109I GCAGC 1 cut(s) 25
MaeI CTAG 1 cut(s) 20
MboII GAAGA 1 cut(s) 76
MluCI AATT 1 cut(s) 51
MlyI GAGTC 1 cut(s) 140
MnlI CCTC 1 cut(s) 135
NlaIII CATG 1 cut(s) 74
PfeI GAWTC 2 cut(s) 152, 163
PkrI GCNGC 1 cut(s) 40
PleI GAGTC 1 cut(s) 140
PpsI GAGTC 1 cut(s) 140
SatI GCNGC 1 cut(s) 39
SchI GAGTC 1 cut(s) 140
SetI ASST 1 cut(s) 127
SgeI CNNG 8 cut(s) 32, 69, 83, 90, 103, 142, 172, 187
Sse9I AATT 1 cut(s) 51
SspMI CTAG 1 cut(s) 20
StyI CCWWGG 1 cut(s) 56
TasI AATT 1 cut(s) 51
TfiI GAWTC 2 cut(s) 152, 163
TseI GCWGC 1 cut(s) 38
TspDTI ATGAA 2 cut(s) 59, 90
XapI RAATTY 1 cut(s) 51
XspI CTAG 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.