RchiOBHm_Chr6g0256101

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
11449013 .. 11449192
180 bp
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UTR
Exon/CDS
Intron
PRQ22971

Sequence Viewer

Length: 180 bp
ATGTGTGCTTCACTAAACCTGTTATTGTATCAACCTCACAAGAAGGTTTCATCTGATTCAGAATCTTTTGTAATTCCTAATTTACCAAATAAGATCAAGATGACAAGAAACCAATTACCGGCTTTCTTCAATCAAAATGTTGAGACAGAATTCACCAAATTGAACAAAGCATCCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

59

Amino Acids

6.74

Weight (kDa)

9.36

Isoelectric Point (pI)

49.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 149
AfiI CCNNNNNNNGG 1 cut(s) 118
AgsI TTSAA 2 cut(s) 130, 163
AloI GAACNNNNNNTCC 1 cut(s) 155
Alw26I GTCTC 1 cut(s) 137
ApoI RAATTY 1 cut(s) 149
AsuHPI GGTGA 1 cut(s) 145
BcoDI GTCTC 1 cut(s) 137
Bsc4I CCNNNNNNNGG 1 cut(s) 118
Bse118I RCCGGY 1 cut(s) 118
BseGI GGATG 1 cut(s) 170
BseLI CCNNNNNNNGG 1 cut(s) 118
BsiSI CCGG 1 cut(s) 119
BslI CCNNNNNNNGG 1 cut(s) 118
BsmAI GTCTC 1 cut(s) 137
Bsp143I GATC 1 cut(s) 93
BsrFI RCCGGY 1 cut(s) 118
BssAI RCCGGY 1 cut(s) 118
BssMI GATC 1 cut(s) 93
BstF5I GGATG 1 cut(s) 170
BstKTI GATC 1 cut(s) 96
BstMAI GTCTC 1 cut(s) 137
BstMBI GATC 1 cut(s) 93
BtsCI GGATG 1 cut(s) 170
Cfr10I RCCGGY 1 cut(s) 118
CviJI RGCY 1 cut(s) 122
CviKI_1 RGCY 1 cut(s) 122
DpnI GATC 1 cut(s) 95
DpnII GATC 1 cut(s) 93
EcoRI GAATTC 1 cut(s) 149
FaiI YATR 2 cut(s) 176, 178
FokI GGATG 1 cut(s) 157
FspEI CC 9 cut(s) 29, 32, 48, 90, 99, 104, 125, 132, 169
HapII CCGG 1 cut(s) 119
HinfI GANTC 2 cut(s) 56, 62
HpaII CCGG 1 cut(s) 119
HphI GGTGA 1 cut(s) 145
Hpy188I TCNGA 2 cut(s) 55, 61
Hpy188III TCNNGA 1 cut(s) 97
HpyAV CCTTC 1 cut(s) 37
Kzo9I GATC 1 cut(s) 93
LpnPI CCDG 2 cut(s) 32, 132
MalI GATC 1 cut(s) 95
MboI GATC 1 cut(s) 93
MboII GAAGA 1 cut(s) 118
MluCI AATT 5 cut(s) 72, 79, 113, 149, 158
MnlI CCTC 1 cut(s) 45
MspI CCGG 1 cut(s) 119
NdeII GATC 1 cut(s) 93
PfeI GAWTC 2 cut(s) 56, 62
Sau3AI GATC 1 cut(s) 93
SetI ASST 3 cut(s) 21, 37, 48
SgeI CNNG 5 cut(s) 31, 52, 109, 117, 131
Sse9I AATT 5 cut(s) 72, 79, 113, 149, 158
TasI AATT 5 cut(s) 72, 79, 113, 149, 158
TfiI GAWTC 2 cut(s) 56, 62
TspDTI ATGAA 1 cut(s) 39
XapI RAATTY 1 cut(s) 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.