RchiOBHm_Chr5g0029261

Phosphoethanolamine N-methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
22924228 .. 22925138
911 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 228 bp
ATGCATTCATTAAAATTTCTGCAGCGGGAATTAAATGCCGTTGAGAAGGACAAGGATGCATTCATTGAGGACTTTTATAAGGAGGACTACAATGACATGGTGGATGGAAGGCAAAGATGGTTAGGACTAACTCTGGAGAGCAGAAGTGGGGCCTCTTCATTGCCAAGAATAAATGGTTATTATACGTCAAGTTTTGCATATGCAGATGCAAAATTGTACTCGAGTTAG

Protein Analysis

75

Amino Acids

8.71

Weight (kDa)

5.23

Isoelectric Point (pI)

61.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 78
AciI CCGC 1 cut(s) 25
AcsI RAATTY 1 cut(s) 14
AfaI GTAC 1 cut(s) 218
Ama87I CYCGRG 1 cut(s) 220
AoxI GGCC 1 cut(s) 150
ApeKI GCWGC 1 cut(s) 22
ApoI RAATTY 1 cut(s) 14
AspS9I GGNCC 1 cut(s) 150
AvaI CYCGRG 1 cut(s) 220
BbvI GCAGC 1 cut(s) 34
BccI CCATC 2 cut(s) 98, 111
BceAI ACGGC 1 cut(s) 23
BfmI CTRYAG 1 cut(s) 20
BisI GCNGC 1 cut(s) 23
BlsI GCNGC 1 cut(s) 24
BmeT110I CYCGRG 1 cut(s) 220
BmgT120I GGNCC 1 cut(s) 150
BmiI GGNNCC 1 cut(s) 151
BmsI GCATC 2 cut(s) 46, 196
BpmI CTGGAG 1 cut(s) 155
Bse3DI GCAATG 1 cut(s) 158
BseGI GGATG 2 cut(s) 61, 109
BseMI GCAATG 1 cut(s) 158
BseXI GCAGC 1 cut(s) 34
BshFI GGCC 1 cut(s) 152
BsiHKCI CYCGRG 1 cut(s) 220
BsmI GAATGC 2 cut(s) 4, 59
BsnI GGCC 1 cut(s) 152
BsoBI CYCGRG 1 cut(s) 220
BspACI CCGC 1 cut(s) 25
BspANI GGCC 1 cut(s) 152
BspLI GGNNCC 1 cut(s) 151
BspMAI CTGCAG 1 cut(s) 24
BsrDI GCAATG 1 cut(s) 158
Bst6I CTCTTC 1 cut(s) 160
BstF5I GGATG 2 cut(s) 61, 109
BstSFI CTRYAG 1 cut(s) 20
BstV1I GCAGC 1 cut(s) 34
BsuRI GGCC 1 cut(s) 152
BtsCI GGATG 2 cut(s) 61, 109
Cfr13I GGNCC 1 cut(s) 150
Csp6I GTAC 1 cut(s) 217
CviAII CATG 1 cut(s) 97
CviJI RGCY 1 cut(s) 152
CviKI_1 RGCY 1 cut(s) 152
CviQI GTAC 1 cut(s) 217
Eam1104I CTCTTC 1 cut(s) 160
EarI CTCTTC 1 cut(s) 160
Eco88I CYCGRG 1 cut(s) 220
EcoO109I RGGNCCY 1 cut(s) 150
EcoT22I ATGCAT 2 cut(s) 6, 61
FaeI CATG 1 cut(s) 100
FaiI YATR 5 cut(s) 78, 98, 183, 199, 201
FatI CATG 1 cut(s) 96
FauI CCCGC 1 cut(s) 18
FauNDI CATATG 1 cut(s) 199
Fnu4HI GCNGC 1 cut(s) 23
FokI GGATG 2 cut(s) 68, 116
Fsp4HI GCNGC 1 cut(s) 23
GluI GCNGC 1 cut(s) 23
GsuI CTGGAG 1 cut(s) 155
HaeIII GGCC 1 cut(s) 152
Hin1II CATG 1 cut(s) 100
Hpy188III TCNNGA 1 cut(s) 134
HpyAV CCTTC 2 cut(s) 40, 102
HpyCH4IV ACGT 1 cut(s) 185
HpyCH4V TGCA 6 cut(s) 4, 22, 59, 197, 203, 209
HpySE526I ACGT 1 cut(s) 185
Hsp92II CATG 1 cut(s) 100
LpnPI CCDG 1 cut(s) 119
Lsp1109I GCAGC 1 cut(s) 34
LweI GCATC 2 cut(s) 46, 196
MaeII ACGT 1 cut(s) 185
MboII GAAGA 1 cut(s) 147
MluCI AATT 3 cut(s) 14, 29, 212
MnlI CCTC 3 cut(s) 61, 76, 163
Mph1103I ATGCAT 2 cut(s) 6, 61
MseI TTAA 2 cut(s) 11, 32
MspA1I CMGCKG 1 cut(s) 25
Mva1269I GAATGC 2 cut(s) 4, 59
NdeI CATATG 1 cut(s) 199
NlaIII CATG 1 cut(s) 100
NlaIV GGNNCC 1 cut(s) 151
NsiI ATGCAT 2 cut(s) 6, 61
PaeR7I CTCGAG 1 cut(s) 220
PctI GAATGC 2 cut(s) 4, 59
PkrI GCNGC 1 cut(s) 24
PsiI TTATAA 1 cut(s) 78
PspN4I GGNNCC 1 cut(s) 151
PspPI GGNCC 1 cut(s) 150
PspXI VCTCGAGB 1 cut(s) 220
PstI CTGCAG 1 cut(s) 24
RsaI GTAC 1 cut(s) 218
RsaNI GTAC 1 cut(s) 217
SaqAI TTAA 2 cut(s) 11, 32
SatI GCNGC 1 cut(s) 23
Sau96I GGNCC 1 cut(s) 150
SetI ASST 1 cut(s) 188
SfaNI GCATC 2 cut(s) 46, 196
SfcI CTRYAG 1 cut(s) 20
Sfr274I CTCGAG 1 cut(s) 220
SgeI CNNG 6 cut(s) 38, 64, 109, 146, 177, 201
SlaI CTCGAG 1 cut(s) 220
SmlI CTYRAG 1 cut(s) 220
SmoI CTYRAG 1 cut(s) 220
Sse9I AATT 3 cut(s) 14, 29, 212
SsiI CCGC 1 cut(s) 25
TaiI ACGT 1 cut(s) 188
TaqI TCGA 1 cut(s) 221
TasI AATT 3 cut(s) 14, 29, 212
TatI WGTACW 1 cut(s) 216
Tru1I TTAA 2 cut(s) 11, 32
Tru9I TTAA 2 cut(s) 11, 32
TseI GCWGC 1 cut(s) 22
TspDTI ATGAA 2 cut(s) 52, 147
XapI RAATTY 1 cut(s) 14
XhoI CTCGAG 1 cut(s) 220
Zsp2I ATGCAT 2 cut(s) 6, 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.