Domain of unknown function (DUF383)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0047461 RchiOBHm_Chr7g0222231 RchiOBHm_Chr7g0231891 |
| rosa_multiflora | Rmu_sc0002919.1_g000001 |
| rosa_samantha | Rh2AG452900 Rh2CG439900 Rh3DG250100 Rh5DG415600 Rh7AG231700 Rh7DG237300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 47 |
| AcsI | RAATTY | 1 cut(s) | 60 |
| AcuI | CTGAAG | 1 cut(s) | 90 |
| AjnI | CCWGG | 1 cut(s) | 75 |
| AluBI | AGCT | 1 cut(s) | 13 |
| AluI | AGCT | 1 cut(s) | 13 |
| Alw21I | GWGCWC | 1 cut(s) | 25 |
| AlwI | GGATC | 1 cut(s) | 47 |
| AoxI | GGCC | 1 cut(s) | 149 |
| ApoI | RAATTY | 1 cut(s) | 60 |
| AsuHPI | GGTGA | 1 cut(s) | 118 |
| Bbv12I | GWGCWC | 1 cut(s) | 25 |
| BciT130I | CCWGG | 1 cut(s) | 77 |
| BclI | TGATCA | 1 cut(s) | 93 |
| Bme1390I | CCNGG | 1 cut(s) | 77 |
| BmrFI | CCNGG | 1 cut(s) | 77 |
| BmsI | GCATC | 1 cut(s) | 106 |
| BpmI | CTGGAG | 1 cut(s) | 98 |
| BpuEI | CTTGAG | 1 cut(s) | 29 |
| Bse1I | ACTGG | 2 cut(s) | 44, 152 |
| BseBI | CCWGG | 1 cut(s) | 77 |
| BseNI | ACTGG | 2 cut(s) | 44, 152 |
| BshFI | GGCC | 1 cut(s) | 151 |
| BsiHKAI | GWGCWC | 1 cut(s) | 25 |
| BsnI | GGCC | 1 cut(s) | 151 |
| Bsp1286I | GDGCHC | 1 cut(s) | 25 |
| Bsp143I | GATC | 2 cut(s) | 52, 93 |
| BspANI | GGCC | 1 cut(s) | 151 |
| BspPI | GGATC | 1 cut(s) | 47 |
| BsrI | ACTGG | 2 cut(s) | 44, 152 |
| BssMI | GATC | 2 cut(s) | 52, 93 |
| Bst2UI | CCWGG | 1 cut(s) | 77 |
| BstC8I | GCNNGC | 1 cut(s) | 121 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstKTI | GATC | 2 cut(s) | 55, 96 |
| BstMBI | GATC | 2 cut(s) | 52, 93 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstNI | CCWGG | 1 cut(s) | 77 |
| BstSCI | CCNGG | 1 cut(s) | 75 |
| BsuRI | GGCC | 1 cut(s) | 151 |
| Cac8I | GCNNGC | 1 cut(s) | 121 |
| CviAII | CATG | 1 cut(s) | 91 |
| CviJI | RGCY | 2 cut(s) | 13, 151 |
| CviKI_1 | RGCY | 2 cut(s) | 13, 151 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| DpnI | GATC | 2 cut(s) | 54, 95 |
| DpnII | GATC | 2 cut(s) | 52, 93 |
| Eco57I | CTGAAG | 1 cut(s) | 90 |
| EcoRII | CCWGG | 1 cut(s) | 75 |
| FaeI | CATG | 1 cut(s) | 94 |
| FaiI | YATR | 2 cut(s) | 88, 92 |
| FatI | CATG | 1 cut(s) | 90 |
| FbaI | TGATCA | 1 cut(s) | 93 |
| FspEI | CC | 9 cut(s) | 18, 57, 62, 65, 69, 89, 89, 114, 133 |
| GsuI | CTGGAG | 1 cut(s) | 98 |
| HaeIII | GGCC | 1 cut(s) | 151 |
| Hin1II | CATG | 1 cut(s) | 94 |
| HphI | GGTGA | 1 cut(s) | 118 |
| Hpy166II | GTNNAC | 1 cut(s) | 41 |
| Hpy188III | TCNNGA | 1 cut(s) | 56 |
| Hpy8I | GTNNAC | 1 cut(s) | 41 |
| HpyCH4V | TGCA | 1 cut(s) | 119 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| Hsp92II | CATG | 1 cut(s) | 94 |
| Ksp22I | TGATCA | 1 cut(s) | 93 |
| Kzo9I | GATC | 2 cut(s) | 52, 93 |
| LpnPI | CCDG | 6 cut(s) | 57, 62, 69, 89, 89, 133 |
| LweI | GCATC | 1 cut(s) | 106 |
| MaeIII | GTNAC | 1 cut(s) | 143 |
| MalI | GATC | 2 cut(s) | 54, 95 |
| MboI | GATC | 2 cut(s) | 52, 93 |
| MfeI | CAATTG | 1 cut(s) | 30 |
| MhlI | GDGCHC | 1 cut(s) | 25 |
| MluCI | AATT | 2 cut(s) | 30, 60 |
| MnlI | CCTC | 1 cut(s) | 73 |
| MspR9I | CCNGG | 1 cut(s) | 77 |
| MunI | CAATTG | 1 cut(s) | 30 |
| MvaI | CCWGG | 1 cut(s) | 77 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NdeII | GATC | 2 cut(s) | 52, 93 |
| NlaIII | CATG | 1 cut(s) | 94 |
| PfoI | TCCNGGA | 1 cut(s) | 75 |
| Psp6I | CCWGG | 1 cut(s) | 75 |
| PspGI | CCWGG | 1 cut(s) | 75 |
| Sau3AI | GATC | 2 cut(s) | 52, 93 |
| ScrFI | CCNGG | 1 cut(s) | 77 |
| SduI | GDGCHC | 1 cut(s) | 25 |
| SetI | ASST | 2 cut(s) | 15, 108 |
| SfaNI | GCATC | 1 cut(s) | 106 |
| SmlI | CTYRAG | 1 cut(s) | 8 |
| SmoI | CTYRAG | 1 cut(s) | 8 |
| Sse9I | AATT | 2 cut(s) | 30, 60 |
| StyD4I | CCNGG | 1 cut(s) | 75 |
| TasI | AATT | 2 cut(s) | 30, 60 |
| XapI | RAATTY | 1 cut(s) | 60 |