Rh7AG231700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
22323264 .. 22325013
1750 bp
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UTR
Exon/CDS
Intron
Rh7AG231700.1

Sequence Viewer

Length: 240 bp
ATGGACGAATCCATTTATGATATTAGACATGATGATTTGCTTTTGAGTAAAGAGCAAGACCCAAATAAGGGTTTGAGATTCTCTCAATTGGCAAGTTCTTGGGTTTTGCTCCGAGCTGCAGTCAAAATCAAAGATATGAAGATAATGAAGTTCTCTCTGCATCCACATCCATTGAGAAAGAAGGGCATGCCTAGTGTTGAAATGTTGGATATCTGGACTGAACTTGAAAGGAAGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

79

Amino Acids

9.36

Weight (kDa)

9.4

Isoelectric Point (pI)

42.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 2 cut(s) 67, 68
AgsI TTSAA 2 cut(s) 200, 227
AluBI AGCT 1 cut(s) 116
AluI AGCT 1 cut(s) 116
ApeKI GCWGC 1 cut(s) 116
BbvI GCAGC 1 cut(s) 103
BfaI CTAG 1 cut(s) 192
BfmI CTRYAG 1 cut(s) 117
BisI GCNGC 1 cut(s) 117
BlsI GCNGC 1 cut(s) 118
BmsI GCATC 1 cut(s) 169
BplI GAGNNNNNCTC 2 cut(s) 67, 99
Bsc4I CCNNNNNNNGG 2 cut(s) 67, 68
BseGI GGATG 2 cut(s) 160, 166
BseLI CCNNNNNNNGG 2 cut(s) 67, 68
BseXI GCAGC 1 cut(s) 103
BslI CCNNNNNNNGG 2 cut(s) 67, 68
BspMAI CTGCAG 1 cut(s) 121
Bst6I CTCTTC 1 cut(s) 227
BstC8I GCNNGC 1 cut(s) 188
BstF5I GGATG 2 cut(s) 160, 166
BstNSI RCATGY 1 cut(s) 190
BstSFI CTRYAG 1 cut(s) 117
BstV1I GCAGC 1 cut(s) 103
BtsCI GGATG 2 cut(s) 160, 166
Cac8I GCNNGC 1 cut(s) 188
CspCI CAANNNNNGTGG 2 cut(s) 153, 188
CviAII CATG 2 cut(s) 29, 187
CviJI RGCY 1 cut(s) 116
CviKI_1 RGCY 1 cut(s) 116
Eam1104I CTCTTC 1 cut(s) 227
EarI CTCTTC 1 cut(s) 227
Eco32I GATATC 1 cut(s) 211
EcoRV GATATC 1 cut(s) 211
FaeI CATG 2 cut(s) 32, 190
FaiI YATR 4 cut(s) 18, 30, 137, 188
FatI CATG 2 cut(s) 28, 186
Fnu4HI GCNGC 1 cut(s) 117
FokI GGATG 2 cut(s) 147, 153
Fsp4HI GCNGC 1 cut(s) 117
FspBI CTAG 1 cut(s) 192
GluI GCNGC 1 cut(s) 117
Hin1II CATG 2 cut(s) 32, 190
HinfI GANTC 2 cut(s) 8, 78
Hpy188I TCNGA 1 cut(s) 113
Hpy188III TCNNGA 1 cut(s) 214
HpyAV CCTTC 1 cut(s) 175
HpyCH4V TGCA 2 cut(s) 119, 160
Hsp92II CATG 2 cut(s) 32, 190
LmnI GCTCC 1 cut(s) 114
LpnPI CCDG 1 cut(s) 199
Lsp1109I GCAGC 1 cut(s) 103
LweI GCATC 1 cut(s) 169
MaeI CTAG 1 cut(s) 192
MboII GAAGA 1 cut(s) 151
MfeI CAATTG 1 cut(s) 86
MluCI AATT 1 cut(s) 86
MmeI TCCRAC 1 cut(s) 186
MunI CAATTG 1 cut(s) 86
NlaIII CATG 2 cut(s) 32, 190
NspI RCATGY 1 cut(s) 190
PaeI GCATGC 1 cut(s) 190
PfeI GAWTC 2 cut(s) 8, 78
PkrI GCNGC 1 cut(s) 118
PstI CTGCAG 1 cut(s) 121
SatI GCNGC 1 cut(s) 117
SetI ASST 1 cut(s) 118
SfaNI GCATC 1 cut(s) 169
SfcI CTRYAG 1 cut(s) 117
SgeI CNNG 9 cut(s) 41, 68, 105, 111, 125, 199, 204, 226, 236
SphI GCATGC 1 cut(s) 190
Sse9I AATT 1 cut(s) 86
SspMI CTAG 1 cut(s) 192
TasI AATT 1 cut(s) 86
TfiI GAWTC 2 cut(s) 8, 78
TseI GCWGC 1 cut(s) 116
TspDTI ATGAA 2 cut(s) 152, 161
XceI RCATGY 1 cut(s) 190
XspI CTAG 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.