RchiOBHm_Chr7g0231891

Domain of unknown function (DUF383)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
55721999 .. 55724492
2494 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20782

Sequence Viewer

Length: 156 bp
ATGCCACTTGAGCTTAGTGCTCTCTCAATTGAGCGTGAACCAGTTGATGATCCTGAAATTCGTGCTGAAGTCCTGGAGGCAATATACATGATCACATTACAGGTGAAAAATGATGCAAGCACTAATGGTTTTCGTTTTTGTTACTGGCCTTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

51

Amino Acids

5.88

Weight (kDa)

4.25

Isoelectric Point (pI)

42.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 44
AcsI RAATTY 1 cut(s) 57
AcuI CTGAAG 1 cut(s) 87
AjnI CCWGG 1 cut(s) 72
AluBI AGCT 1 cut(s) 13
AluI AGCT 1 cut(s) 13
Alw21I GWGCWC 1 cut(s) 22
AlwI GGATC 1 cut(s) 44
AoxI GGCC 1 cut(s) 146
ApoI RAATTY 1 cut(s) 57
AsuHPI GGTGA 1 cut(s) 115
Bbv12I GWGCWC 1 cut(s) 22
BciT130I CCWGG 1 cut(s) 74
BclI TGATCA 1 cut(s) 90
Bme1390I CCNGG 1 cut(s) 74
BmrFI CCNGG 1 cut(s) 74
BmsI GCATC 1 cut(s) 103
BpmI CTGGAG 1 cut(s) 95
BpuEI CTTGAG 1 cut(s) 29
Bse1I ACTGG 2 cut(s) 41, 149
BseBI CCWGG 1 cut(s) 74
BseNI ACTGG 2 cut(s) 41, 149
BshFI GGCC 1 cut(s) 148
BsiHKAI GWGCWC 1 cut(s) 22
BsnI GGCC 1 cut(s) 148
Bsp1286I GDGCHC 1 cut(s) 22
Bsp143I GATC 2 cut(s) 49, 90
BspANI GGCC 1 cut(s) 148
BspPI GGATC 1 cut(s) 44
BsrI ACTGG 2 cut(s) 41, 149
BssMI GATC 2 cut(s) 49, 90
Bst2UI CCWGG 1 cut(s) 74
BstC8I GCNNGC 1 cut(s) 118
BstDEI CTNAG 1 cut(s) 14
BstKTI GATC 2 cut(s) 52, 93
BstMBI GATC 2 cut(s) 49, 90
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstNI CCWGG 1 cut(s) 74
BstSCI CCNGG 1 cut(s) 72
BsuRI GGCC 1 cut(s) 148
Cac8I GCNNGC 1 cut(s) 118
CviAII CATG 1 cut(s) 88
CviJI RGCY 2 cut(s) 13, 148
CviKI_1 RGCY 2 cut(s) 13, 148
DdeI CTNAG 1 cut(s) 14
DpnI GATC 2 cut(s) 51, 92
DpnII GATC 2 cut(s) 49, 90
Eco57I CTGAAG 1 cut(s) 87
EcoRII CCWGG 1 cut(s) 72
FaeI CATG 1 cut(s) 91
FaiI YATR 2 cut(s) 85, 89
FatI CATG 1 cut(s) 87
FbaI TGATCA 1 cut(s) 90
FspEI CC 9 cut(s) 18, 54, 59, 62, 66, 86, 86, 111, 130
GsuI CTGGAG 1 cut(s) 95
HaeIII GGCC 1 cut(s) 148
Hin1II CATG 1 cut(s) 91
HphI GGTGA 1 cut(s) 115
Hpy166II GTNNAC 1 cut(s) 38
Hpy188III TCNNGA 1 cut(s) 53
Hpy8I GTNNAC 1 cut(s) 38
HpyCH4V TGCA 1 cut(s) 116
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
HpyF3I CTNAG 1 cut(s) 14
Hsp92II CATG 1 cut(s) 91
Ksp22I TGATCA 1 cut(s) 90
Kzo9I GATC 2 cut(s) 49, 90
LpnPI CCDG 6 cut(s) 54, 59, 66, 86, 86, 130
LweI GCATC 1 cut(s) 103
MaeIII GTNAC 1 cut(s) 140
MalI GATC 2 cut(s) 51, 92
MboI GATC 2 cut(s) 49, 90
MfeI CAATTG 1 cut(s) 27
MhlI GDGCHC 1 cut(s) 22
MluCI AATT 2 cut(s) 27, 57
MnlI CCTC 1 cut(s) 70
MspR9I CCNGG 1 cut(s) 74
MunI CAATTG 1 cut(s) 27
MvaI CCWGG 1 cut(s) 74
MwoI GCNNNNNNNGC 1 cut(s) 10
NdeII GATC 2 cut(s) 49, 90
NlaIII CATG 1 cut(s) 91
PfoI TCCNGGA 1 cut(s) 72
Psp6I CCWGG 1 cut(s) 72
PspGI CCWGG 1 cut(s) 72
Sau3AI GATC 2 cut(s) 49, 90
ScrFI CCNGG 1 cut(s) 74
SduI GDGCHC 1 cut(s) 22
SetI ASST 2 cut(s) 15, 105
SfaNI GCATC 1 cut(s) 103
SmlI CTYRAG 1 cut(s) 8
SmoI CTYRAG 1 cut(s) 8
Sse9I AATT 2 cut(s) 27, 57
StyD4I CCNGG 1 cut(s) 72
TasI AATT 2 cut(s) 27, 57
XapI RAATTY 1 cut(s) 57
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.