Domain of unknown function (DUF383)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0047461 RchiOBHm_Chr7g0222231 RchiOBHm_Chr7g0231891 |
| rosa_multiflora | Rmu_sc0002919.1_g000001 |
| rosa_samantha | Rh2AG452900 Rh2CG439900 Rh3DG250100 Rh5DG415600 Rh7AG231700 Rh7DG237300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 119 |
| AcsI | RAATTY | 1 cut(s) | 132 |
| AcuI | CTGAAG | 1 cut(s) | 162 |
| AgsI | TTSAA | 1 cut(s) | 33 |
| AjnI | CCWGG | 1 cut(s) | 147 |
| Alw21I | GWGCWC | 1 cut(s) | 97 |
| AlwI | GGATC | 1 cut(s) | 119 |
| ApoI | RAATTY | 1 cut(s) | 132 |
| Bbv12I | GWGCWC | 1 cut(s) | 97 |
| BccI | CCATC | 1 cut(s) | 172 |
| BciT130I | CCWGG | 1 cut(s) | 149 |
| BclI | TGATCA | 1 cut(s) | 165 |
| Bme1390I | CCNGG | 1 cut(s) | 149 |
| BmrFI | CCNGG | 1 cut(s) | 149 |
| BmsI | GCATC | 1 cut(s) | 47 |
| BpmI | CTGGAG | 1 cut(s) | 170 |
| BpuEI | CTTGAG | 2 cut(s) | 31, 101 |
| Bse1I | ACTGG | 1 cut(s) | 116 |
| BseBI | CCWGG | 1 cut(s) | 149 |
| BseNI | ACTGG | 1 cut(s) | 116 |
| BsiHKAI | GWGCWC | 1 cut(s) | 97 |
| Bsp1286I | GDGCHC | 1 cut(s) | 97 |
| Bsp143I | GATC | 3 cut(s) | 65, 124, 165 |
| BspPI | GGATC | 1 cut(s) | 119 |
| BsrI | ACTGG | 1 cut(s) | 116 |
| BssMI | GATC | 3 cut(s) | 65, 124, 165 |
| Bst2UI | CCWGG | 1 cut(s) | 149 |
| Bst4CI | ACNGT | 1 cut(s) | 53 |
| BstKTI | GATC | 3 cut(s) | 68, 127, 168 |
| BstMBI | GATC | 3 cut(s) | 65, 124, 165 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 82 |
| BstNI | CCWGG | 1 cut(s) | 149 |
| BstSCI | CCNGG | 1 cut(s) | 147 |
| CviAII | CATG | 1 cut(s) | 163 |
| DpnI | GATC | 3 cut(s) | 67, 126, 167 |
| DpnII | GATC | 3 cut(s) | 65, 124, 165 |
| Eco57I | CTGAAG | 1 cut(s) | 162 |
| EcoRII | CCWGG | 1 cut(s) | 147 |
| FaeI | CATG | 1 cut(s) | 166 |
| FaiI | YATR | 1 cut(s) | 164 |
| FatI | CATG | 1 cut(s) | 162 |
| FbaI | TGATCA | 1 cut(s) | 165 |
| FspEI | CC | 8 cut(s) | 90, 129, 134, 137, 141, 161, 164, 175 |
| GsuI | CTGGAG | 1 cut(s) | 170 |
| Hin1II | CATG | 1 cut(s) | 166 |
| HinfI | GANTC | 1 cut(s) | 13 |
| Hpy166II | GTNNAC | 1 cut(s) | 113 |
| Hpy188I | TCNGA | 1 cut(s) | 45 |
| Hpy188III | TCNNGA | 1 cut(s) | 128 |
| Hpy8I | GTNNAC | 1 cut(s) | 113 |
| HpyCH4III | ACNGT | 1 cut(s) | 53 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 82 |
| Hsp92II | CATG | 1 cut(s) | 166 |
| Ksp22I | TGATCA | 1 cut(s) | 165 |
| Kzo9I | GATC | 3 cut(s) | 65, 124, 165 |
| LpnPI | CCDG | 4 cut(s) | 129, 134, 141, 161 |
| LweI | GCATC | 1 cut(s) | 47 |
| MalI | GATC | 3 cut(s) | 67, 126, 167 |
| MboI | GATC | 3 cut(s) | 65, 124, 165 |
| MfeI | CAATTG | 1 cut(s) | 102 |
| MhlI | GDGCHC | 1 cut(s) | 97 |
| MluCI | AATT | 2 cut(s) | 102, 132 |
| MlyI | GAGTC | 1 cut(s) | 22 |
| MnlI | CCTC | 1 cut(s) | 145 |
| MspR9I | CCNGG | 1 cut(s) | 149 |
| MunI | CAATTG | 1 cut(s) | 102 |
| MvaI | CCWGG | 1 cut(s) | 149 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 82 |
| NdeII | GATC | 3 cut(s) | 65, 124, 165 |
| NlaIII | CATG | 1 cut(s) | 166 |
| PfoI | TCCNGGA | 1 cut(s) | 147 |
| PleI | GAGTC | 1 cut(s) | 21 |
| PpsI | GAGTC | 1 cut(s) | 21 |
| Psp6I | CCWGG | 1 cut(s) | 147 |
| PspGI | CCWGG | 1 cut(s) | 147 |
| Sau3AI | GATC | 3 cut(s) | 65, 124, 165 |
| SchI | GAGTC | 1 cut(s) | 22 |
| ScrFI | CCNGG | 1 cut(s) | 149 |
| SduI | GDGCHC | 1 cut(s) | 97 |
| SfaNI | GCATC | 1 cut(s) | 47 |
| SmlI | CTYRAG | 2 cut(s) | 10, 80 |
| SmoI | CTYRAG | 2 cut(s) | 10, 80 |
| Sse9I | AATT | 2 cut(s) | 102, 132 |
| StyD4I | CCNGG | 1 cut(s) | 147 |
| TaaI | ACNGT | 1 cut(s) | 53 |
| TasI | AATT | 2 cut(s) | 102, 132 |
| TspDTI | ATGAA | 1 cut(s) | 20 |
| XapI | RAATTY | 1 cut(s) | 132 |