RchiOBHm_Chr7g0222231

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
43454942 .. 43457145
2204 bp
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UTR
Exon/CDS
Intron
PRQ19888

Sequence Viewer

Length: 129 bp
ATGCTTTTGCAGGTGAAAAATGATGCAACCACTAATGGTTTTTGTTTTTGTTACTGGCCTTTGCTAACTCTGTTGATAGATTACGGTTCAGCAGCAATGGGACAGAACCCAACGGAGGCTGAGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

42

Amino Acids

4.65

Weight (kDa)

4.05

Isoelectric Point (pI)

7.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 115
AluBI AGCT 1 cut(s) 124
AluI AGCT 1 cut(s) 124
Alw21I GWGCWC 1 cut(s) 126
AoxI GGCC 1 cut(s) 56
ApeKI GCWGC 1 cut(s) 92
AsuHPI GGTGA 1 cut(s) 25
BanII GRGCYC 1 cut(s) 126
Bbv12I GWGCWC 1 cut(s) 126
BbvI GCAGC 1 cut(s) 104
BisI GCNGC 1 cut(s) 93
BlpI GCTNAGC 1 cut(s) 120
BlsI GCNGC 1 cut(s) 94
BmsI GCATC 1 cut(s) 13
Bpu1102I GCTNAGC 1 cut(s) 120
Bsc4I CCNNNNNNNGG 1 cut(s) 115
Bse1I ACTGG 1 cut(s) 59
Bse3DI GCAATG 1 cut(s) 102
BseLI CCNNNNNNNGG 1 cut(s) 115
BseMI GCAATG 1 cut(s) 102
BseMII CTCAG 1 cut(s) 111
BseNI ACTGG 1 cut(s) 59
BseXI GCAGC 1 cut(s) 104
BshFI GGCC 1 cut(s) 58
BsiHKAI GWGCWC 1 cut(s) 126
BslFI GGGAC 1 cut(s) 114
BslI CCNNNNNNNGG 1 cut(s) 115
BsmFI GGGAC 1 cut(s) 114
BsnI GGCC 1 cut(s) 58
Bsp1286I GDGCHC 1 cut(s) 126
Bsp1720I GCTNAGC 1 cut(s) 120
BspANI GGCC 1 cut(s) 58
BspCNI CTCAG 1 cut(s) 112
BsrDI GCAATG 1 cut(s) 102
BsrI ACTGG 1 cut(s) 59
Bst4CI ACNGT 1 cut(s) 86
BstDEI CTNAG 1 cut(s) 120
BstV1I GCAGC 1 cut(s) 104
BsuRI GGCC 1 cut(s) 58
CviJI RGCY 3 cut(s) 58, 119, 124
CviKI_1 RGCY 3 cut(s) 58, 119, 124
DdeI CTNAG 1 cut(s) 120
Ecl136II GAGCTC 1 cut(s) 124
Eco24I GRGCYC 1 cut(s) 126
Eco53kI GAGCTC 1 cut(s) 124
EcoICRI GAGCTC 1 cut(s) 124
EcoT38I GRGCYC 1 cut(s) 126
FaqI GGGAC 1 cut(s) 114
Fnu4HI GCNGC 1 cut(s) 93
FriOI GRGCYC 1 cut(s) 126
Fsp4HI GCNGC 1 cut(s) 93
GluI GCNGC 1 cut(s) 93
HaeIII GGCC 1 cut(s) 58
HphI GGTGA 1 cut(s) 25
HpyCH4III ACNGT 1 cut(s) 86
HpyCH4V TGCA 2 cut(s) 10, 26
HpyF3I CTNAG 1 cut(s) 120
LpnPI CCDG 1 cut(s) 40
Lsp1109I GCAGC 1 cut(s) 104
LweI GCATC 1 cut(s) 13
MaeIII GTNAC 1 cut(s) 50
MhlI GDGCHC 1 cut(s) 126
MnlI CCTC 1 cut(s) 109
PkrI GCNGC 1 cut(s) 94
Psp124BI GAGCTC 1 cut(s) 126
SacI GAGCTC 1 cut(s) 126
SatI GCNGC 1 cut(s) 93
SduI GDGCHC 1 cut(s) 126
SetI ASST 2 cut(s) 15, 126
SfaNI GCATC 1 cut(s) 13
SgeI CNNG 2 cut(s) 23, 67
SstI GAGCTC 1 cut(s) 126
TaaI ACNGT 1 cut(s) 86
TseI GCWGC 1 cut(s) 92
TspGWI ACGGA 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.