Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0014342

Physical Location & Seq

Genomic Coordinates Reverse (-)

52695133 .. 52697232

Gene Structure 2100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGCTGAGCCTCAGACCTCAACGTTTGTTTCCAAACCCGGTTTCTCACCGTCTCCTTTCTCTCTCAGCTCACAGACACAAGCCCACCAATTGGAACACCACCACCCACAAATTTGTTCAAGCAAACCCACTTCTCTCCCTATTAGAAACCTGCAAATCCATGCCCCAGTTGAAGCAAATCCAAACCCAAATGATCATTACCGGCTTCATCTCAGACGGGTTCGCTTCTAGTCGCCTCATTGCCTTCTGTGCGCTTTCGGAGTGCCGAAATCTTCACTATGCCACCAAGATCCTGCACAATGTGCACGACCAAAATGCCTTCTCTTGGAATGTGGTCATCCGAGGGTTTTCGGAGACCGAAAATCCGAGAGGAGCAGTTGTAATGTATAGGGAAATGTTGAGAAATGGTGGGTCGAGACCGGATAATTATACTTACCCATTACTGCTAGGAATCTGCTCTAATTTGTCATTCAATTTGATGGGGCGTGTGGTTCTTGGCCATGTGTTCCAAGTGGGATTGGATTCTGATAGATTTGTTCGCAATGCGGCGATTCATATGTTTGTTTCATGCAGAGAATTAGGGGATGCACGTAAGGTGTTCGACGAAAGTTCTGTGAGAGACTTGGTGTCTTGGAATTCTCTGATTCATGGTTATGTGCGAAGTGGGTTGGCACGTGAGGCATTGCGGGTTTATGAGGAAATGGAGGTGGAGAGAGTTGAGCCGGATCAAGTGACAATGATTGGGGTGGTTTCTTCGTGTGCCCAACTTGAGGACTTGAGTCTCGGGAGGAAATTTCATGGGTTGATACGAGAGATTGGGCTAGGCTTGACTCCTCCTCTTGCCAATGCACTTATGGACATGTACGCCAAGTGTGGGAATCTTGAGGCAGCTCGAGCAGTATTTGACAACATGAAACAGAAAACCATCGTCTCATGGACTACAATGATAGTGGGATATGCCAAACATGGGTTTTTGGAGATTGCTCACCGCCTTTTGTACGAGGTGCCAGAGAGTAATGTTGTGCCGTGGAATGCAATGATCGGTGCCTACGTGCAAGCTAGACGTAGCAAGGAGGCTTTGGCGCTGTTTCATGAAATGCAATCTAGGAACATAAGTCCTGATGAAATAACCATGGTTTGCTGCTTATCTGCATGCTCACAACTTGGAGCAGTTGATGTTGGAATATGGATTCACCATTATATTGAAAAACATGATCTTTCTCTCAATGTTGCTTTGGGGACTGCCCTTGTTGACATGTATGCTAAGTGTGGGAACATCACAAAAGCTCTCAATATTTTCTCGGACATGCCAGGAAAGAATTGTTTCACTTGGACATCTATCATTTGTGGTTTAGCCCTTAATGGACATGCACATGATGCTATATCTTACTTTGAAGAGATGATAGATACGGGACTGAAGCCCGATGAGATCACGTTTCTTGGAGTATTATCAGCATGTTGCCATGGAGGTTTGGTTGAAGAAGGCCGAAAGTATTTTTCCTTAATGAACACTAAATTCAATATCTGCCCGAAACTTAAACATTACTCTTGCATGGTGGACCTTCTAGGTAGGGCTGGTCTTTTGCAAGAAGCAGCGGATCTTATTAATAGCATGCCAATCGAGGCAGATGCCGTGGTGTGGGGTGCATTATTCTTTGCTTGTTATATTCACAAAAGTGTTTTGATGGGAGAAAGAGCAGCTACCAAGCTTCTTGAGTTGGAATCCCATGATAGTGGAATTTATGTTTTGCTTGCAAAAATGTATAGGGAATCGAATATGTGGGAGAAGGCAGAGCAGGCAAAGAAGATGATGAAGGAGAGAGGACTGGAGAAGACTCCTGGTTGTAGCTCAATTGAGGTGAGTGGCAGCGTGTGCGAGTTCATTGTCAGAGACAAATCACATCCTCATTCGAAACAGATATATGATTGCTTATTTCAGTTAACAAAACAAATGGATCCGATGGGTGGTATGTCTGAAGTTCCTGCACTTTGGGATGACTCTCTCCTTGGTGATGAATTTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1 DYW_deaminase PPR PPR_2

Protein Analysis

674

Amino Acids

75.53

Weight (kDa)

6.58

Isoelectric Point (pI)

42.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	105 - 151	4e-07	PPR repeat family
PPR_2	PF13041	207 - 254	8.4e-11	PPR repeat family
PPR	PF01535	209 - 237	2.5e-08	PPR repeat
PPR_2	PF13041	339 - 386	3.1e-12	PPR repeat family
PPR	PF01535	342 - 371	1.4e-07	PPR repeat
PPR_2	PF13041	440 - 488	1.1e-09	PPR repeat family
E_motif	PF20431	558 - 619	6e-16	E motif
Eplus_motif	PF20430	625 - 651	4.2e-09	E+ motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22410
fragaria_vesca	FvH4_3g29070
malus_domestica	MD03G1178400.v1.1
prunus_persica	Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0051471
rosa_laevigata	RLG00000034874
rosa_multiflora	Rmu_sc0023383.1_g000001
rosa_roxburghii	Rroxscaffold_1G00027080
rosa_rugosa	Rorug05G0279100
rosa_samantha	Rh5CG387100
rosa_wichuraiana	Rw5G033140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	158
AccB1I	GGYRCC	2 cut(s)	1003, 1043
AccB7I	CCANNNNNTGG	1 cut(s)	90
AciI	CCGC	4 cut(s)	545, 685, 988, 1595
AclI	AACGTT	1 cut(s)	22
AclWI	GGATC	5 cut(s)	283, 732, 1605, 1949, 1962
AcoI	YGGCCR	1 cut(s)	496
AcsI	RAATTY	6 cut(s)	110, 634, 791, 1514, 1737, 2015
AcuI	CTGAAG	2 cut(s)	1436, 1995
AcvI	CACGTG	1 cut(s)	674
AdeI	CACNNNGTG	1 cut(s)	301
AfaI	GTAC	2 cut(s)	863, 998
AfiI	CCNNNNNNNGG	7 cut(s)	90, 324, 769, 873, 966, 1638, 1964
AflIII	ACRYGT	2 cut(s)	858, 1254
AgsI	TTSAA	7 cut(s)	119, 172, 472, 1205, 1394, 1478, 1519
AhdI	GACNNNNNGTC	1 cut(s)	625
AjnI	CCWGG	2 cut(s)	1309, 1837
AjuI	GAANNNNNNNTTGG	2 cut(s)	25, 57
AleI	CACNNNNGTG	1 cut(s)	1674
AluBI	AGCT	7 cut(s)	68, 890, 1058, 1286, 1700, 1708, 1848
AluI	AGCT	7 cut(s)	68, 890, 1058, 1286, 1700, 1708, 1848
Alw21I	GWGCWC	1 cut(s)	306
Alw26I	GTCTC	7 cut(s)	56, 347, 409, 612, 785, 934, 1884
Alw44I	GTGCAC	1 cut(s)	302
AlwI	GGATC	5 cut(s)	283, 732, 1605, 1949, 1962
Ama87I	CYCGRG	2 cut(s)	782, 891
AoxI	GGCC	2 cut(s)	496, 1483
ApaLI	GTGCAC	1 cut(s)	302
ApeKI	GCWGC	5 cut(s)	887, 1140, 1592, 1697, 1866
ApoI	RAATTY	6 cut(s)	110, 634, 791, 1514, 1737, 2015
AseI	ATTAAT	1 cut(s)	1605
Asp700I	GAANNNNTTC	1 cut(s)	1322
AspLEI	GCGC	2 cut(s)	253, 1084
AspS9I	GGNCC	1 cut(s)	1558
AsuC2I	CCSGG	1 cut(s)	38
AsuHPI	GGTGA	5 cut(s)	38, 977, 1184, 1870, 2021
AsuII	TTCGAA	1 cut(s)	1910
AvaI	CYCGRG	2 cut(s)	782, 891
AvaII	GGWCC	1 cut(s)	1558
BaeGI	GKGCMC	2 cut(s)	306, 763
BalI	TGGCCA	1 cut(s)	498
BamHI	GGATCC	1 cut(s)	1954
BanI	GGYRCC	2 cut(s)	1003, 1043
BbrPI	CACGTG	1 cut(s)	674
BbsI	GAAGAC	1 cut(s)	1838
Bbv12I	GWGCWC	1 cut(s)	306
BbvI	GCAGC	5 cut(s)	899, 1127, 1604, 1709, 1878
BccI	CCATC	4 cut(s)	472, 932, 1678, 1954
BceAI	ACGGC	2 cut(s)	1009, 1616
BcgI	CGANNNNNNTGC	6 cut(s)	296, 330, 1600, 1610, 1634, 1644
BciT130I	CCWGG	2 cut(s)	1311, 1839
BclI	TGATCA	1 cut(s)	192
BcnI	CCSGG	1 cut(s)	38
BcoDI	GTCTC	7 cut(s)	56, 347, 409, 612, 785, 934, 1884
BfaI	CTAG	6 cut(s)	228, 446, 821, 1059, 1104, 1565
BfoI	RGCGCY	1 cut(s)	1085
BfuAI	ACCTGC	1 cut(s)	158
BisI	GCNGC	6 cut(s)	546, 888, 1141, 1593, 1698, 1867
BlpI	GCTNAGC	1 cut(s)	5
BlsI	GCNGC	6 cut(s)	547, 889, 1142, 1594, 1699, 1868
Bme1390I	CCNGG	3 cut(s)	38, 1311, 1839
Bme18I	GGWCC	1 cut(s)	1558
BmeRI	GACNNNNNGTC	1 cut(s)	625
BmeT110I	CYCGRG	2 cut(s)	782, 891
BmgT120I	GGNCC	1 cut(s)	1558
BmiI	GGNNCC	3 cut(s)	1005, 1045, 1956
BmrFI	CCNGG	3 cut(s)	38, 1311, 1839
BmrI	ACTGGG	1 cut(s)	160
BmsI	GCATC	3 cut(s)	574, 1366, 1618
BmuI	ACTGGG	1 cut(s)	160
BoxI	GACNNNNGTC	1 cut(s)	777
BpiI	GAAGAC	1 cut(s)	1838
BpmI	CTGGAG	1 cut(s)	1847
Bpu1102I	GCTNAGC	1 cut(s)	5
Bpu14I	TTCGAA	1 cut(s)	1910
BpuEI	CTTGAG	4 cut(s)	788, 796, 902, 1733
BpuMI	CCSGG	1 cut(s)	38
BsaAI	YACGTR	3 cut(s)	590, 674, 1051
BsaI	GGTCTC	2 cut(s)	347, 409
BsaJI	CCNNGG	6 cut(s)	340, 1025, 1131, 1462, 1632, 2005
BsaWI	WCCGGW	1 cut(s)	418
BsaXI	ACNNNNNCTCC	4 cut(s)	363, 393, 1458, 1488
Bsc4I	CCNNNNNNNGG	7 cut(s)	90, 324, 769, 873, 966, 1638, 1964
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	2 cut(s)	166, 1830
Bse3DI	GCAATG	4 cut(s)	237, 547, 680, 1041
BseBI	CCWGG	2 cut(s)	1311, 1839
BseDI	CCNNGG	6 cut(s)	340, 1025, 1131, 1462, 1632, 2005
BseGI	GGATG	4 cut(s)	336, 589, 1900, 1999
BseLI	CCNNNNNNNGG	7 cut(s)	90, 324, 769, 873, 966, 1638, 1964
BseMI	GCAATG	4 cut(s)	237, 547, 680, 1041
BseMII	CTCAG	3 cut(s)	25, 78, 225
BseNI	ACTGG	2 cut(s)	166, 1830
BseRI	GAGGAG	3 cut(s)	384, 822, 825
BseSI	GKGCMC	2 cut(s)	306, 763
BseXI	GCAGC	5 cut(s)	899, 1127, 1604, 1709, 1878
BsgI	GTGCAG	2 cut(s)	278, 1968
BshFI	GGCC	2 cut(s)	498, 1485
BshNI	GGYRCC	2 cut(s)	1003, 1043
BsiHKAI	GWGCWC	1 cut(s)	306
BsiHKCI	CYCGRG	2 cut(s)	782, 891
BsiSI	CCGG	4 cut(s)	38, 201, 419, 722
BslFI	GGGAC	2 cut(s)	1252, 1425
BslI	CCNNNNNNNGG	7 cut(s)	90, 324, 769, 873, 966, 1638, 1964
BsmAI	GTCTC	7 cut(s)	56, 347, 409, 612, 785, 934, 1884
BsmBI	CGTCTC	2 cut(s)	56, 934
BsmFI	GGGAC	2 cut(s)	1252, 1425
BsmI	GAATGC	1 cut(s)	1036
BsnI	GGCC	2 cut(s)	498, 1485
Bso31I	GGTCTC	2 cut(s)	347, 409
BsoBI	CYCGRG	2 cut(s)	782, 891
Bsp119I	TTCGAA	1 cut(s)	1910
Bsp1286I	GDGCHC	2 cut(s)	306, 763
Bsp143I	GATC	8 cut(s)	192, 288, 724, 1038, 1213, 1428, 1597, 1954
Bsp1720I	GCTNAGC	1 cut(s)	5
Bsp19I	CCATGG	2 cut(s)	1131, 1462
BspACI	CCGC	4 cut(s)	545, 685, 988, 1595
BspANI	GGCC	2 cut(s)	498, 1485
BspCNI	CTCAG	3 cut(s)	24, 77, 224
BspHI	TCATGA	1 cut(s)	1090
BspLI	GGNNCC	3 cut(s)	1005, 1045, 1956
BspMI	ACCTGC	1 cut(s)	158
BspPI	GGATC	5 cut(s)	283, 732, 1605, 1949, 1962
BspT104I	TTCGAA	1 cut(s)	1910
BspT107I	GGYRCC	2 cut(s)	1003, 1043
BspTNI	GGTCTC	2 cut(s)	347, 409
BsrDI	GCAATG	4 cut(s)	237, 547, 680, 1041
BsrFI	RCCGGY	1 cut(s)	200
BsrI	ACTGG	2 cut(s)	166, 1830
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	6 cut(s)	340, 1025, 1131, 1462, 1632, 2005
BssMI	GATC	8 cut(s)	192, 288, 724, 1038, 1213, 1428, 1597, 1954
BssT1I	CCWWGG	3 cut(s)	1131, 1462, 2005
Bst2UI	CCWGG	2 cut(s)	1311, 1839
Bst4CI	ACNGT	1 cut(s)	50
Bst6I	CTCTTC	1 cut(s)	1389
BstAPI	GCANNNNNTGC	3 cut(s)	301, 1376, 1872
BstBAI	YACGTR	3 cut(s)	590, 674, 1051
BstBI	TTCGAA	1 cut(s)	1910
BstC8I	GCNNGC	5 cut(s)	1056, 1153, 1613, 1752, 1797
BstDEI	CTNAG	5 cut(s)	5, 11, 64, 211, 1263
BstDSI	CCRYGG	4 cut(s)	1025, 1131, 1462, 1632
BstF5I	GGATG	4 cut(s)	336, 589, 1900, 1999
BstH2I	RGCGCY	1 cut(s)	1085
BstHHI	GCGC	2 cut(s)	253, 1084
BstKTI	GATC	8 cut(s)	195, 291, 727, 1041, 1216, 1431, 1600, 1957
BstMAI	GTCTC	7 cut(s)	56, 347, 409, 612, 785, 934, 1884
BstMBI	GATC	8 cut(s)	192, 288, 724, 1038, 1213, 1428, 1597, 1954
BstMWI	GCNNNNNNNGC	7 cut(s)	248, 301, 677, 893, 1376, 1796, 1872
BstNI	CCWGG	2 cut(s)	1311, 1839
BstNSI	RCATGY	7 cut(s)	862, 1155, 1258, 1309, 1370, 1458, 1615
BstPAI	GACNNNNGTC	1 cut(s)	777
BstSCI	CCNGG	3 cut(s)	36, 1309, 1837
BstSLI	GKGCMC	2 cut(s)	306, 763
BstV1I	GCAGC	5 cut(s)	899, 1127, 1604, 1709, 1878
BstV2I	GAAGAC	1 cut(s)	1838
BstX2I	RGATCY	3 cut(s)	288, 1597, 1954
BstXI	CCANNNNNNTGG	1 cut(s)	1733
BstYI	RGATCY	3 cut(s)	288, 1597, 1954
BsuRI	GGCC	2 cut(s)	498, 1485
BtgI	CCRYGG	4 cut(s)	1025, 1131, 1462, 1632
BtsCI	GGATG	4 cut(s)	336, 589, 1900, 1999
BveI	ACCTGC	1 cut(s)	158
Cac8I	GCNNGC	5 cut(s)	1056, 1153, 1613, 1752, 1797
CciI	TCATGA	1 cut(s)	1090
CfoI	GCGC	2 cut(s)	253, 1084
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	1 cut(s)	1558
Csp6I	GTAC	2 cut(s)	862, 997
CspCI	CAANNNNNGTGG	2 cut(s)	930, 965
CviQI	GTAC	2 cut(s)	862, 997
DdeI	CTNAG	5 cut(s)	5, 11, 64, 211, 1263
DpnI	GATC	8 cut(s)	194, 290, 726, 1040, 1215, 1430, 1599, 1956
DpnII	GATC	8 cut(s)	192, 288, 724, 1038, 1213, 1428, 1597, 1954
DraIII	CACNNNGTG	1 cut(s)	301
DriI	GACNNNNNGTC	1 cut(s)	625
EaeI	YGGCCR	1 cut(s)	496
Eam1104I	CTCTTC	1 cut(s)	1389
Eam1105I	GACNNNNNGTC	1 cut(s)	625
EarI	CTCTTC	1 cut(s)	1389
Eco130I	CCWWGG	3 cut(s)	1131, 1462, 2005
Eco31I	GGTCTC	2 cut(s)	347, 409
Eco47I	GGWCC	1 cut(s)	1558
Eco57I	CTGAAG	2 cut(s)	1436, 1995
Eco72I	CACGTG	1 cut(s)	674
Eco88I	CYCGRG	2 cut(s)	782, 891
EcoRI	GAATTC	1 cut(s)	634
EcoRII	CCWGG	2 cut(s)	1309, 1837
EcoT14I	CCWWGG	3 cut(s)	1131, 1462, 2005
ErhI	CCWWGG	3 cut(s)	1131, 1462, 2005
Esp3I	CGTCTC	2 cut(s)	56, 934
FaqI	GGGAC	2 cut(s)	1252, 1425
FauI	CCCGC	1 cut(s)	678
FauNDI	CATATG	1 cut(s)	555
FbaI	TGATCA	1 cut(s)	192
Fnu4HI	GCNGC	6 cut(s)	546, 888, 1141, 1593, 1698, 1867
FokI	GGATG	4 cut(s)	323, 596, 1887, 2006
Fsp4HI	GCNGC	6 cut(s)	546, 888, 1141, 1593, 1698, 1867
FspBI	CTAG	6 cut(s)	228, 446, 821, 1059, 1104, 1565
GlaI	GCGC	2 cut(s)	252, 1083
GluI	GCNGC	6 cut(s)	546, 888, 1141, 1593, 1698, 1867
GsuI	CTGGAG	1 cut(s)	1847
HaeII	RGCGCY	1 cut(s)	1085
HaeIII	GGCC	2 cut(s)	498, 1485
HapII	CCGG	4 cut(s)	38, 201, 419, 722
HhaI	GCGC	2 cut(s)	253, 1084
Hin6I	GCGC	2 cut(s)	251, 1082
HinP1I	GCGC	2 cut(s)	251, 1082
HincII	GTYRAC	2 cut(s)	1252, 1941
HindII	GTYRAC	2 cut(s)	1252, 1941
HindIII	AAGCTT	1 cut(s)	1706
HpaI	GTTAAC	1 cut(s)	1941
HpaII	CCGG	4 cut(s)	38, 201, 419, 722
HphI	GGTGA	5 cut(s)	38, 977, 1184, 1870, 2021
Hpy166II	GTNNAC	4 cut(s)	304, 1252, 1558, 1941
Hpy188III	TCNNGA	6 cut(s)	414, 784, 881, 1091, 1118, 1712
Hpy8I	GTNNAC	4 cut(s)	304, 1252, 1558, 1941
Hpy99I	CGWCG	1 cut(s)	605
HpyAV	CCTTC	6 cut(s)	253, 328, 1475, 1571, 1780, 1807
HpyCH4III	ACNGT	1 cut(s)	50
HpyCH4IV	ACGT	6 cut(s)	22, 589, 673, 1050, 1063, 1433
HpyF10VI	GCNNNNNNNGC	7 cut(s)	248, 301, 677, 893, 1376, 1796, 1872
HpyF3I	CTNAG	5 cut(s)	5, 11, 64, 211, 1263
HpySE526I	ACGT	6 cut(s)	22, 589, 673, 1050, 1063, 1433
HspAI	GCGC	2 cut(s)	251, 1082
Ksp22I	TGATCA	1 cut(s)	192
KspAI	GTTAAC	1 cut(s)	1941
Kzo9I	GATC	8 cut(s)	192, 288, 724, 1038, 1213, 1428, 1597, 1954
LmnI	GCTCC	2 cut(s)	371, 1166
Lsp1109I	GCAGC	5 cut(s)	899, 1127, 1604, 1709, 1878
LweI	GCATC	3 cut(s)	574, 1366, 1618
MaeI	CTAG	6 cut(s)	228, 446, 821, 1059, 1104, 1565
MaeII	ACGT	6 cut(s)	22, 589, 673, 1050, 1063, 1433
MaeIII	GTNAC	1 cut(s)	730
MalI	GATC	8 cut(s)	194, 290, 726, 1040, 1215, 1430, 1599, 1956
MboI	GATC	8 cut(s)	192, 288, 724, 1038, 1213, 1428, 1597, 1954
MboII	GAAGA	6 cut(s)	263, 744, 1406, 1490, 1816, 1843
MfeI	CAATTG	2 cut(s)	88, 1851
MflI	RGATCY	3 cut(s)	288, 1597, 1954
MhlI	GDGCHC	2 cut(s)	306, 763
MlsI	TGGCCA	1 cut(s)	498
MluNI	TGGCCA	1 cut(s)	498
MlyI	GAGTC	4 cut(s)	787, 823, 1828, 1991
MmeI	TCCRAC	2 cut(s)	1159, 1698
Mox20I	TGGCCA	1 cut(s)	498
MroXI	GAANNNNTTC	1 cut(s)	1322
MscI	TGGCCA	1 cut(s)	498
MseI	TTAA	5 cut(s)	1359, 1502, 1536, 1605, 1940
MslI	CAYNNNNRTG	4 cut(s)	651, 1371, 1674, 1731
Msp20I	TGGCCA	1 cut(s)	498
MspA1I	CMGCKG	1 cut(s)	1595
MspI	CCGG	4 cut(s)	38, 201, 419, 722
MspR9I	CCNGG	3 cut(s)	38, 1311, 1839
MunI	CAATTG	2 cut(s)	88, 1851
Mva1269I	GAATGC	1 cut(s)	1036
MvaI	CCWGG	2 cut(s)	1311, 1839
MwoI	GCNNNNNNNGC	7 cut(s)	248, 301, 677, 893, 1376, 1796, 1872
NciI	CCSGG	1 cut(s)	38
NcoI	CCATGG	2 cut(s)	1131, 1462
NdeI	CATATG	1 cut(s)	555
NdeII	GATC	8 cut(s)	192, 288, 724, 1038, 1213, 1428, 1597, 1954
NlaIV	GGNNCC	3 cut(s)	1005, 1045, 1956
NmuCI	GTSAC	1 cut(s)	730
NspI	RCATGY	7 cut(s)	862, 1155, 1258, 1309, 1370, 1458, 1615
NspV	TTCGAA	1 cut(s)	1910
OliI	CACNNNNGTG	1 cut(s)	1674
PaeI	GCATGC	2 cut(s)	1155, 1615
PaeR7I	CTCGAG	1 cut(s)	891
PagI	TCATGA	1 cut(s)	1090
PciI	ACATGT	2 cut(s)	858, 1254
PcsI	WCGNNNNNNNCGW	1 cut(s)	1047
PctI	GAATGC	1 cut(s)	1036
PdmI	GAANNNNTTC	1 cut(s)	1322
PfeI	GAWTC	8 cut(s)	450, 521, 550, 643, 877, 1189, 1721, 1769
PflMI	CCANNNNNTGG	1 cut(s)	90
PkrI	GCNGC	6 cut(s)	547, 889, 1142, 1594, 1699, 1868
PleI	GAGTC	4 cut(s)	786, 823, 1828, 1991
PmaCI	CACGTG	1 cut(s)	674
PmlI	CACGTG	1 cut(s)	674
PpsI	GAGTC	4 cut(s)	786, 823, 1828, 1991
Ppu21I	YACGTR	3 cut(s)	590, 674, 1051
PscI	ACATGT	2 cut(s)	858, 1254
PshAI	GACNNNNGTC	1 cut(s)	777
PshBI	ATTAAT	1 cut(s)	1605
Psp1406I	AACGTT	1 cut(s)	22
Psp6I	CCWGG	2 cut(s)	1309, 1837
PspCI	CACGTG	1 cut(s)	674
PspGI	CCWGG	2 cut(s)	1309, 1837
PspN4I	GGNNCC	3 cut(s)	1005, 1045, 1956
PspPI	GGNCC	1 cut(s)	1558
PspXI	VCTCGAGB	1 cut(s)	891
PsuI	RGATCY	3 cut(s)	288, 1597, 1954
RsaI	GTAC	2 cut(s)	863, 998
RsaNI	GTAC	2 cut(s)	862, 997
RseI	CAYNNNNRTG	4 cut(s)	651, 1371, 1674, 1731
SaqAI	TTAA	5 cut(s)	1359, 1502, 1536, 1605, 1940
SatI	GCNGC	6 cut(s)	546, 888, 1141, 1593, 1698, 1867
Sau3AI	GATC	8 cut(s)	192, 288, 724, 1038, 1213, 1428, 1597, 1954
Sau96I	GGNCC	1 cut(s)	1558
SchI	GAGTC	4 cut(s)	787, 823, 1828, 1991
ScrFI	CCNGG	3 cut(s)	38, 1311, 1839
SduI	GDGCHC	2 cut(s)	306, 763
SfaNI	GCATC	3 cut(s)	574, 1366, 1618
Sfr274I	CTCGAG	1 cut(s)	891
SfuI	TTCGAA	1 cut(s)	1910
SinI	GGWCC	1 cut(s)	1558
SlaI	CTCGAG	1 cut(s)	891
SmiMI	CAYNNNNRTG	4 cut(s)	651, 1371, 1674, 1731
SmlI	CTYRAG	5 cut(s)	767, 775, 881, 891, 1712
SmoI	CTYRAG	5 cut(s)	767, 775, 881, 891, 1712
SphI	GCATGC	2 cut(s)	1155, 1615
SsiI	CCGC	4 cut(s)	545, 685, 988, 1595
SspI	AATATT	1 cut(s)	1294
SspMI	CTAG	6 cut(s)	228, 446, 821, 1059, 1104, 1565
StyD4I	CCNGG	3 cut(s)	36, 1309, 1837
StyI	CCWWGG	3 cut(s)	1131, 1462, 2005
TaaI	ACNGT	1 cut(s)	50
TaiI	ACGT	6 cut(s)	25, 592, 676, 1053, 1066, 1436
TaqI	TCGA	6 cut(s)	413, 600, 892, 1620, 1772, 1910
TaqII	GACCGA	1 cut(s)	371
TauI	GCSGC	1 cut(s)	548
TfiI	GAWTC	8 cut(s)	450, 521, 550, 643, 877, 1189, 1721, 1769
Tru1I	TTAA	5 cut(s)	1359, 1502, 1536, 1605, 1940
Tru9I	TTAA	5 cut(s)	1359, 1502, 1536, 1605, 1940
TseFI	GTSAC	1 cut(s)	730
TseI	GCWGC	5 cut(s)	887, 1140, 1592, 1697, 1866
Tsp45I	GTSAC	1 cut(s)	730
Van91I	CCANNNNNTGG	1 cut(s)	90
VneI	GTGCAC	1 cut(s)	302
VpaK11BI	GGWCC	1 cut(s)	1558
VspI	ATTAAT	1 cut(s)	1605
XapI	RAATTY	6 cut(s)	110, 634, 791, 1514, 1737, 2015
XceI	RCATGY	7 cut(s)	862, 1155, 1258, 1309, 1370, 1458, 1615
XcmI	CCANNNNNNNNNTGG	1 cut(s)	850
XhoI	CTCGAG	1 cut(s)	891
XmnI	GAANNNNTTC	1 cut(s)	1322
XspI	CTAG	6 cut(s)	228, 446, 821, 1059, 1104, 1565

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.