Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003591

Physical Location & Seq

Genomic Coordinates Forward (+)

53613389 .. 53624548

Gene Structure 11160 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGCCCACCTCAGCCTCGGCCTCCGCCTCCGCCTCTTCAACCACCGCCACCGGCCCCAATTCCGATCTTCTCATCCGCCTTAACTCTCCCGACTCCCAAGTCCAGCTCAAGGCTCTCAGGGAGCTCAAGAACCGCATCATCGGCAATCGCACCAAGAAGCTTTCCTTCGTCAAGCTCGGCCTCGTCCCTGCCGTCGCCGCCATCCTCGCCTCTAAAGCCCAGGCCCACTCCCACTCCGATCACGATTGTAATCTCCTTGTTCAGTCCGCCGCTGCCCTCGGAAGCTTCGCCTGCGGTTTCGATGCCGGCGTCCGAGCCGTTCTCGATGCCGGCGCCTGCCCTAACCTCTTGTTGCTTTTATCTCATCCTGATGACAAGGTTGTGGACGCTGGTGCACGTTCTTTAAGAATGATTTATCAATCAAACCTGGCTCCAAAGTGTGATTTCCTTCAAGACAAAAACATGGAATTTCTTCTTTCATTATTGAATAGTGAGAATGAAAATGTTACAGGACTTGGTGCAAGTATAGTTATACATTCTTGTGAGACTATAACAGAAAAGAAGGCACTATGTCATGCTGGTGTTTTGAAGAAGCTGGTTAGCCTTCTTCAAGGTTCTCCAAGTCAGAGAGATAATAGTTTAGAATCTCTAGCCACAATTATGAAGGACAATGATGAAGCTGTTTCAGAGTTTGTGGGATGTGAAAGTGGAAGAGCTTTGAGTTCTGTTATAGAATTAACAAAGGATAGACATCTCCGCACAAGATTTTTGGCTTCGAGATGCTTGATTGCTATAAGGAACACTTCTTCTTGCTATTTGCAAGATATGGGCATTAAAACCAAGCTGGTTCATCTCTTGCTTGAACTTCATGATGATCCCGGTCAAGTTGGAGACGAAGCTCCCTTTGCATTTTCTAGTTTAATTTCTCAAAAAGTCGATCTACAGAAAATAGCACTTGAGGCAAATGCTATTGATAAACTCTACAACCACTTGCAAAAGAATCATTTACATCCGAAACGTTTCCAAGGACTATTACTGGCACTGGCTGATCTATGCTCAAAGTTGGAGAGCTGTAGGTCTAGATTCCTGTCGTTGCAGGCATTGAACTTGGTATCTGAAGCCCTGACTCATGATAGTTCTGACGTACGTACTGCAGCTTGCATTTGCTTAAGATGCGTCTCTCGCTCTATCAAGAATTTGTGTGCAGGTAATTTTATGAATGAAATGATTGTCCCTCCCTTGGTTCGGCTGTTGGATGACCCTTCTATTTCAGTCCAGGTTGCAGCTCTGAGTGCTGTTGGAAACATTGTTGTTGATTTTACTACACATAGGTCATTATTTCTACAGTGTGGAGGCGTGAAACAGCTTGTTCAGTTATCAAGATCAATGGATTCAACTTTGAGATTAAATGCTTTATGGGCTTTAAGGAACCTGATGTGCCTTGCAGACTACATATGTAAACAAGGGATATTCATGGAGCTCACAGCTTCCTCATTAGCAAGTCTTATCTGTGACCCTGAGCCTTTTGTCCAAGAGCAGGCTCTAGCACTCATCCGCAATCTTGTTGATGGATGTATGAACTCAGTTGAGCTTGTATTCGCTGAAGATGGTATAATATTAGATGCTGTTGGAAGGCAGTTGCAGAGTGCTTCAAGAGATGAAATTTGGATACAGGGATTGTATGTGCTTAGCAATGTTGCAAGTGGAAATGAAGTTCACAAGGAAGCTGTTATGCATCAACTAGTACCACAGGCAGACAATGGGGCCCAATCTCTTATTCTGAAGTTTCTGCAGAGTAATGAAAGCCAGTTACGTATAGCTGCTGTCTGGACGATTGTTAATCTTACTTTTCCATCCACTCCTAATGCATTTAGCCGTTTTGTAAAACTACACAATGCTGGCATAGTTTCTCAAGTGAAGAGCATGGCCAGTGATCCTTGCCTAGACGTTAAGCTTCGGGTAAAATCAGCACTCGGGCAATTTAAGACCTTCAGTGATGGCTCAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm DUF4220

Protein Analysis

669

Amino Acids

72.5

Weight (kDa)

7.21

Isoelectric Point (pI)

43.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Arm	PF00514	410 - 437	9.1e-06	Armadillo/beta-catenin-like repeat
Arm	PF00514	448 - 478	1e-07	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003591)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51350
fragaria_vesca	FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860 FvH4_3g28860
malus_domestica	MD03G1175100.v1.1 MD11G1193200.v1.1
prunus_persica	Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1 Prupe.4G249300_v2.0.a1
pyrus_communis	pycom03g13260
rosa_chinensis	RchiOBHm_Chr5g0052041
rosa_laevigata	RLG00000034847
rosa_multiflora	Rmu_sc0012304.1_g000003 Rmu_sc0012304.1_g000004
rosa_roxburghii	Rroxscaffold_1G00027840
rosa_rugosa	Rorug05G0275300 Rorug05G0275400 Rorug05G0275500
rosa_samantha	Rh5AG347300 Rh5BG358200 Rh5CG383700 Rh5DG373500
rosa_wichuraiana	Rw5G032820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	98
Acc36I	ACCTGC	1 cut(s)	1196
AccB1I	GGYRCC	1 cut(s)	332
AclI	AACGTT	1 cut(s)	1018
AclWI	GGATC	2 cut(s)	869, 1928
AcoI	YGGCCR	1 cut(s)	1926
AcsI	RAATTY	3 cut(s)	467, 1195, 1662
AcuI	CTGAAG	4 cut(s)	1137, 1623, 1802, 1975
AcyI	GRCGYC	2 cut(s)	309, 333
AfaI	GTAC	3 cut(s)	1146, 1150, 1746
AfiI	CCNNNNNNNGG	4 cut(s)	109, 1240, 1245, 1537
AflII	CTTAAG	1 cut(s)	1168
AgsI	TTSAA	9 cut(s)	39, 452, 487, 589, 611, 863, 1105, 1395, 1653
AhlI	ACTAGT	1 cut(s)	1741
AjnI	CCWGG	3 cut(s)	219, 426, 1275
AjuI	GAANNNNNNNTTGG	2 cut(s)	1761, 1793
AloI	GAACNNNNNNTCC	2 cut(s)	1698, 1730
Alw21I	GWGCWC	3 cut(s)	126, 397, 1482
Alw26I	GTCTC	3 cut(s)	539, 885, 1183
Alw44I	GTGCAC	1 cut(s)	393
AlwI	GGATC	2 cut(s)	869, 1928
Ama87I	CYCGRG	1 cut(s)	1973
AoxI	GGCC	6 cut(s)	18, 52, 178, 222, 1764, 1926
ApaI	GGGCCC	1 cut(s)	1768
ApaLI	GTGCAC	1 cut(s)	393
ApeKI	GCWGC	4 cut(s)	272, 1154, 1283, 1820
ApoI	RAATTY	3 cut(s)	467, 1195, 1662
Asp700I	GAANNNNTTC	2 cut(s)	471, 1019
AspLEI	GCGC	1 cut(s)	335
AspS9I	GGNCC	4 cut(s)	53, 223, 1764, 1765
AsuC2I	CCSGG	1 cut(s)	879
AvaI	CYCGRG	1 cut(s)	1973
BaeGI	GKGCMC	2 cut(s)	397, 1768
BalI	TGGCCA	1 cut(s)	1928
BanI	GGYRCC	1 cut(s)	332
BanII	GRGCYC	3 cut(s)	126, 1482, 1768
Bbv12I	GWGCWC	3 cut(s)	126, 397, 1482
BbvCI	CCTCAGC	1 cut(s)	10
BbvI	GCAGC	4 cut(s)	259, 1166, 1295, 1807
BccI	CCATC	5 cut(s)	209, 1562, 1601, 1861, 1991
BceAI	ACGGC	3 cut(s)	176, 302, 1860
BciT130I	CCWGG	3 cut(s)	221, 428, 1277
BciVI	GTATCC	1 cut(s)	1662
BcnI	CCSGG	1 cut(s)	879
BcoDI	GTCTC	3 cut(s)	539, 885, 1183
BcuI	ACTAGT	1 cut(s)	1741
BfaI	CTAG	6 cut(s)	650, 915, 1080, 1544, 1742, 1943
BfmI	CTRYAG	5 cut(s)	941, 1072, 1152, 1343, 1790
BfoI	RGCGCY	1 cut(s)	336
BfrI	CTTAAG	1 cut(s)	1168
BfuAI	ACCTGC	1 cut(s)	1196
BfuI	GTATCC	1 cut(s)	1662
BisI	GCNGC	6 cut(s)	198, 270, 273, 1155, 1284, 1821
BlpI	GCTNAGC	1 cut(s)	1688
BlsI	GCNGC	6 cut(s)	199, 271, 274, 1156, 1285, 1822
Bme1390I	CCNGG	4 cut(s)	221, 428, 879, 1277
BmeT110I	CYCGRG	1 cut(s)	1973
BmgT120I	GGNCC	4 cut(s)	53, 223, 1764, 1765
BmiI	GGNNCC	6 cut(s)	55, 334, 432, 1430, 1765, 1766
BmrFI	CCNGG	4 cut(s)	221, 428, 879, 1277
BmsI	GCATC	7 cut(s)	144, 292, 316, 770, 1163, 1612, 1744
BplI	GAGNNNNNCTC	2 cut(s)	306, 338
Bpu10I	CCTNAGC	2 cut(s)	10, 1518
Bpu1102I	GCTNAGC	1 cut(s)	1688
BpuEI	CTTGAG	4 cut(s)	92, 110, 977, 1896
BpuMI	CCSGG	1 cut(s)	879
BsaAI	YACGTR	2 cut(s)	1148, 1814
BsaBI	GATNNNNATC	2 cut(s)	249, 750
BsaHI	GRCGYC	2 cut(s)	309, 333
BsaJI	CCNNGG	5 cut(s)	15, 219, 277, 1024, 1239
BsaXI	ACNNNNNCTCC	2 cut(s)	218, 248
Bsc4I	CCNNNNNNNGG	4 cut(s)	109, 1240, 1245, 1537
Bse118I	RCCGGY	3 cut(s)	50, 305, 329
Bse1I	ACTGG	4 cut(s)	1041, 1047, 1807, 1929
Bse3DI	GCAATG	1 cut(s)	1699
Bse8I	GATNNNNATC	2 cut(s)	249, 750
BseBI	CCWGG	3 cut(s)	221, 428, 1277
BseDI	CCNNGG	5 cut(s)	15, 219, 277, 1024, 1239
BseGI	GGATG	9 cut(s)	72, 201, 364, 704, 1009, 1261, 1551, 1577, 1853
BseJI	GATNNNNATC	2 cut(s)	249, 750
BseLI	CCNNNNNNNGG	4 cut(s)	109, 1240, 1245, 1537
BseMI	GCAATG	1 cut(s)	1699
BseMII	CTCAG	5 cut(s)	24, 130, 1280, 1509, 1596
BseNI	ACTGG	4 cut(s)	1041, 1047, 1807, 1929
BseSI	GKGCMC	2 cut(s)	397, 1768
BseXI	GCAGC	4 cut(s)	259, 1166, 1295, 1807
BsgI	GTGCAG	1 cut(s)	1224
BshFI	GGCC	6 cut(s)	20, 54, 180, 224, 1766, 1928
BshNI	GGYRCC	1 cut(s)	332
BsiHKAI	GWGCWC	3 cut(s)	126, 397, 1482
BsiHKCI	CYCGRG	1 cut(s)	1973
BsiSI	CCGG	4 cut(s)	51, 306, 330, 879
BsiWI	CGTACG	1 cut(s)	1144
BslFI	GGGAC	2 cut(s)	170, 1217
BslI	CCNNNNNNNGG	4 cut(s)	109, 1240, 1245, 1537
BsmAI	GTCTC	3 cut(s)	539, 885, 1183
BsmBI	CGTCTC	2 cut(s)	885, 1183
BsmFI	GGGAC	2 cut(s)	170, 1217
BsnI	GGCC	6 cut(s)	20, 54, 180, 224, 1766, 1928
BsoBI	CYCGRG	1 cut(s)	1973
Bsp120I	GGGCCC	1 cut(s)	1764
Bsp1286I	GDGCHC	4 cut(s)	126, 397, 1482, 1768
Bsp143I	GATC	7 cut(s)	64, 238, 874, 937, 1048, 1382, 1933
Bsp1720I	GCTNAGC	1 cut(s)	1688
BspANI	GGCC	6 cut(s)	20, 54, 180, 224, 1766, 1928
BspCNI	CTCAG	5 cut(s)	23, 129, 1281, 1510, 1595
BspHI	TCATGA	2 cut(s)	868, 1129
BspLI	GGNNCC	6 cut(s)	55, 334, 432, 1430, 1765, 1766
BspMAI	CTGCAG	2 cut(s)	1156, 1794
BspMI	ACCTGC	1 cut(s)	1196
BspPI	GGATC	2 cut(s)	869, 1928
BspQI	GCTCTTC	2 cut(s)	706, 1913
BspT107I	GGYRCC	1 cut(s)	332
BspTI	CTTAAG	1 cut(s)	1168
BsrDI	GCAATG	1 cut(s)	1699
BsrFI	RCCGGY	3 cut(s)	50, 305, 329
BsrI	ACTGG	4 cut(s)	1041, 1047, 1807, 1929
BssAI	RCCGGY	3 cut(s)	50, 305, 329
BssECI	CCNNGG	5 cut(s)	15, 219, 277, 1024, 1239
BssMI	GATC	7 cut(s)	64, 238, 874, 937, 1048, 1382, 1933
BssNI	GRCGYC	2 cut(s)	309, 333
BssT1I	CCWWGG	2 cut(s)	1024, 1239
Bst2UI	CCWGG	3 cut(s)	221, 428, 1277
Bst4CI	ACNGT	1 cut(s)	1347
Bst6I	CTCTTC	3 cut(s)	40, 706, 1913
BstACI	GRCGYC	2 cut(s)	309, 333
BstAFI	CTTAAG	1 cut(s)	1168
BstBAI	YACGTR	2 cut(s)	1148, 1814
BstC8I	GCNNGC	8 cut(s)	292, 307, 331, 337, 1098, 1159, 1539, 1900
BstDEI	CTNAG	6 cut(s)	10, 116, 1289, 1518, 1582, 1688
BstF5I	GGATG	9 cut(s)	72, 201, 364, 704, 1009, 1261, 1551, 1577, 1853
BstH2I	RGCGCY	1 cut(s)	336
BstHHI	GCGC	1 cut(s)	335
BstKTI	GATC	7 cut(s)	67, 241, 877, 940, 1051, 1385, 1936
BstMAI	GTCTC	3 cut(s)	539, 885, 1183
BstMBI	GATC	7 cut(s)	64, 238, 874, 937, 1048, 1382, 1933
BstNI	CCWGG	3 cut(s)	221, 428, 1277
BstSCI	CCNGG	4 cut(s)	219, 426, 877, 1275
BstSFI	CTRYAG	5 cut(s)	941, 1072, 1152, 1343, 1790
BstSLI	GKGCMC	2 cut(s)	397, 1768
BstSNI	TACGTA	2 cut(s)	1148, 1814
BstV1I	GCAGC	4 cut(s)	259, 1166, 1295, 1807
BsuI	GTATCC	1 cut(s)	1662
BsuRI	GGCC	6 cut(s)	20, 54, 180, 224, 1766, 1928
BtsCI	GGATG	9 cut(s)	72, 201, 364, 704, 1009, 1261, 1551, 1577, 1853
BtsIMutI	CAGTG	4 cut(s)	1040, 1352, 1936, 1999
BveI	ACCTGC	1 cut(s)	1196
Cac8I	GCNNGC	8 cut(s)	292, 307, 331, 337, 1098, 1159, 1539, 1900
CciI	TCATGA	2 cut(s)	868, 1129
CfoI	GCGC	1 cut(s)	335
Cfr10I	RCCGGY	3 cut(s)	50, 305, 329
Cfr13I	GGNCC	4 cut(s)	53, 223, 1764, 1765
CseI	GACGC	3 cut(s)	298, 395, 1165
Csp6I	GTAC	3 cut(s)	1145, 1149, 1745
CviAII	CATG	7 cut(s)	463, 575, 869, 1130, 1474, 1924, 2007
CviQI	GTAC	3 cut(s)	1145, 1149, 1745
DdeI	CTNAG	6 cut(s)	10, 116, 1289, 1518, 1582, 1688
DinI	GGCGCC	1 cut(s)	334
DpnI	GATC	7 cut(s)	66, 240, 876, 939, 1050, 1384, 1935
DpnII	GATC	7 cut(s)	64, 238, 874, 937, 1048, 1382, 1933
DrdI	GACNNNNNNGTC	1 cut(s)	98
DseDI	GACNNNNNNGTC	1 cut(s)	98
EaeI	YGGCCR	1 cut(s)	1926
Eam1104I	CTCTTC	3 cut(s)	40, 706, 1913
EarI	CTCTTC	3 cut(s)	40, 706, 1913
EciI	GGCGGA	4 cut(s)	13, 19, 65, 256
Ecl136II	GAGCTC	2 cut(s)	124, 1480
Eco105I	TACGTA	2 cut(s)	1148, 1814
Eco130I	CCWWGG	2 cut(s)	1024, 1239
Eco24I	GRGCYC	3 cut(s)	126, 1482, 1768
Eco53kI	GAGCTC	2 cut(s)	124, 1480
Eco57I	CTGAAG	4 cut(s)	1137, 1623, 1802, 1975
Eco88I	CYCGRG	1 cut(s)	1973
EcoICRI	GAGCTC	2 cut(s)	124, 1480
EcoO109I	RGGNCCY	1 cut(s)	1764
EcoRII	CCWGG	3 cut(s)	219, 426, 1275
EcoT14I	CCWWGG	2 cut(s)	1024, 1239
EcoT22I	ATGCAT	2 cut(s)	1737, 1870
EcoT38I	GRGCYC	3 cut(s)	126, 1482, 1768
EgeI	GGCGCC	1 cut(s)	334
EheI	GGCGCC	1 cut(s)	334
ErhI	CCWWGG	2 cut(s)	1024, 1239
Esp3I	CGTCTC	2 cut(s)	885, 1183
FaeI	CATG	7 cut(s)	466, 578, 872, 1133, 1477, 1927, 2010
FalI	AAGNNNNNCTT	4 cut(s)	149, 181, 787, 819
FaqI	GGGAC	2 cut(s)	170, 1217
FatI	CATG	7 cut(s)	462, 574, 868, 1129, 1473, 1923, 2006
FauNDI	CATATG	1 cut(s)	1454
Fnu4HI	GCNGC	6 cut(s)	198, 270, 273, 1155, 1284, 1821
FokI	GGATG	9 cut(s)	59, 188, 351, 711, 996, 1268, 1538, 1584, 1840
FriOI	GRGCYC	3 cut(s)	126, 1482, 1768
Fsp4HI	GCNGC	6 cut(s)	198, 270, 273, 1155, 1284, 1821
FspBI	CTAG	6 cut(s)	650, 915, 1080, 1544, 1742, 1943
GlaI	GCGC	1 cut(s)	334
GluI	GCNGC	6 cut(s)	198, 270, 273, 1155, 1284, 1821
HaeII	RGCGCY	1 cut(s)	336
HaeIII	GGCC	6 cut(s)	20, 54, 180, 224, 1766, 1928
HapII	CCGG	4 cut(s)	51, 306, 330, 879
HgaI	GACGC	3 cut(s)	298, 395, 1165
HhaI	GCGC	1 cut(s)	335
Hin1I	GRCGYC	2 cut(s)	309, 333
Hin1II	CATG	7 cut(s)	466, 578, 872, 1133, 1477, 1927, 2010
Hin6I	GCGC	1 cut(s)	333
HinP1I	GCGC	1 cut(s)	333
HindIII	AAGCTT	3 cut(s)	158, 283, 1952
HinfI	GANTC	6 cut(s)	92, 644, 1000, 1083, 1126, 1391
HpaII	CCGG	4 cut(s)	51, 306, 330, 879
Hpy166II	GTNNAC	4 cut(s)	385, 395, 1460, 1717
Hpy8I	GTNNAC	4 cut(s)	385, 395, 1460, 1717
Hpy99I	CGWCG	1 cut(s)	197
HpyAV	CCTTC	8 cut(s)	175, 458, 556, 614, 658, 1272, 1626, 1999
HpyCH4III	ACNGT	1 cut(s)	1347
HpyCH4IV	ACGT	6 cut(s)	397, 1018, 1143, 1147, 1813, 1947
HpyF3I	CTNAG	6 cut(s)	10, 116, 1289, 1518, 1582, 1688
HpySE526I	ACGT	6 cut(s)	397, 1018, 1143, 1147, 1813, 1947
Hsp92I	GRCGYC	2 cut(s)	309, 333
Hsp92II	CATG	7 cut(s)	466, 578, 872, 1133, 1477, 1927, 2010
HspAI	GCGC	1 cut(s)	333
KasI	GGCGCC	1 cut(s)	332
KroI	GCCGGC	2 cut(s)	305, 329
KroNI	GCCGGC	2 cut(s)	307, 331
Kzo9I	GATC	7 cut(s)	64, 238, 874, 937, 1048, 1382, 1933
LguI	GCTCTTC	2 cut(s)	706, 1913
LmnI	GCTCC	4 cut(s)	121, 436, 904, 1477
Lsp1109I	GCAGC	4 cut(s)	259, 1166, 1295, 1807
LweI	GCATC	7 cut(s)	144, 292, 316, 770, 1163, 1612, 1744
MaeI	CTAG	6 cut(s)	650, 915, 1080, 1544, 1742, 1943
MaeII	ACGT	6 cut(s)	397, 1018, 1143, 1147, 1813, 1947
MaeIII	GTNAC	3 cut(s)	505, 1511, 1809
MalI	GATC	7 cut(s)	66, 240, 876, 939, 1050, 1384, 1935
MboI	GATC	7 cut(s)	64, 238, 874, 937, 1048, 1382, 1933
MboII	GAAGA	9 cut(s)	27, 59, 464, 599, 601, 723, 798, 1616, 1930
MhlI	GDGCHC	4 cut(s)	126, 397, 1482, 1768
MlsI	TGGCCA	1 cut(s)	1928
MluCI	AATT	9 cut(s)	58, 467, 657, 734, 921, 1195, 1210, 1662, 1979
MluNI	TGGCCA	1 cut(s)	1928
Mly113I	GGCGCC	1 cut(s)	333
MlyI	GAGTC	2 cut(s)	86, 1120
MmeI	TCCRAC	5 cut(s)	868, 1044, 1233, 1279, 1609
Mox20I	TGGCCA	1 cut(s)	1928
Mph1103I	ATGCAT	2 cut(s)	1737, 1870
MroNI	GCCGGC	2 cut(s)	305, 329
MroXI	GAANNNNTTC	2 cut(s)	471, 1019
MscI	TGGCCA	1 cut(s)	1928
MslI	CAYNNNNRTG	4 cut(s)	369, 540, 579, 659
Msp20I	TGGCCA	1 cut(s)	1928
MspA1I	CMGCKG	1 cut(s)	272
MspCI	CTTAAG	1 cut(s)	1168
MspI	CCGG	4 cut(s)	51, 306, 330, 879
MspR9I	CCNGG	4 cut(s)	221, 428, 879, 1277
MvaI	CCWGG	3 cut(s)	221, 428, 1277
NaeI	GCCGGC	2 cut(s)	307, 331
NarI	GGCGCC	1 cut(s)	333
NciI	CCSGG	1 cut(s)	879
NdeI	CATATG	1 cut(s)	1454
NdeII	GATC	7 cut(s)	64, 238, 874, 937, 1048, 1382, 1933
NgoMIV	GCCGGC	2 cut(s)	305, 329
NlaIII	CATG	7 cut(s)	466, 578, 872, 1133, 1477, 1927, 2010
NlaIV	GGNNCC	6 cut(s)	55, 334, 432, 1430, 1765, 1766
NmeAIII	GCCGAG	1 cut(s)	156
NmuCI	GTSAC	1 cut(s)	1511
NsiI	ATGCAT	2 cut(s)	1737, 1870
PagI	TCATGA	2 cut(s)	868, 1129
PciSI	GCTCTTC	2 cut(s)	706, 1913
PcsI	WCGNNNNNNNCGW	2 cut(s)	189, 306
PdiI	GCCGGC	2 cut(s)	307, 331
PdmI	GAANNNNTTC	2 cut(s)	471, 1019
PfeI	GAWTC	4 cut(s)	644, 1000, 1083, 1391
Pfl23II	CGTACG	1 cut(s)	1144
PkrI	GCNGC	6 cut(s)	199, 271, 274, 1156, 1285, 1822
PleI	GAGTC	2 cut(s)	86, 1120
PluTI	GGCGCC	1 cut(s)	336
PpsI	GAGTC	2 cut(s)	86, 1120
Ppu21I	YACGTR	2 cut(s)	1148, 1814
Psp124BI	GAGCTC	2 cut(s)	126, 1482
Psp1406I	AACGTT	1 cut(s)	1018
Psp6I	CCWGG	3 cut(s)	219, 426, 1275
PspGI	CCWGG	3 cut(s)	219, 426, 1275
PspLI	CGTACG	1 cut(s)	1144
PspN4I	GGNNCC	6 cut(s)	55, 334, 432, 1430, 1765, 1766
PspOMI	GGGCCC	1 cut(s)	1764
PspPI	GGNCC	4 cut(s)	53, 223, 1764, 1765
PstI	CTGCAG	2 cut(s)	1156, 1794
RsaI	GTAC	3 cut(s)	1146, 1150, 1746
RsaNI	GTAC	3 cut(s)	1145, 1149, 1745
RseI	CAYNNNNRTG	4 cut(s)	369, 540, 579, 659
SacI	GAGCTC	2 cut(s)	126, 1482
SapI	GCTCTTC	2 cut(s)	706, 1913
SatI	GCNGC	6 cut(s)	198, 270, 273, 1155, 1284, 1821
Sau3AI	GATC	7 cut(s)	64, 238, 874, 937, 1048, 1382, 1933
Sau96I	GGNCC	4 cut(s)	53, 223, 1764, 1765
SchI	GAGTC	2 cut(s)	86, 1120
ScrFI	CCNGG	4 cut(s)	221, 428, 879, 1277
SduI	GDGCHC	4 cut(s)	126, 397, 1482, 1768
SfaNI	GCATC	7 cut(s)	144, 292, 316, 770, 1163, 1612, 1744
SfcI	CTRYAG	5 cut(s)	941, 1072, 1152, 1343, 1790
SfoI	GGCGCC	1 cut(s)	334
SmiMI	CAYNNNNRTG	4 cut(s)	369, 540, 579, 659
SmlI	CTYRAG	5 cut(s)	107, 125, 956, 1168, 1911
SmoI	CTYRAG	5 cut(s)	107, 125, 956, 1168, 1911
SnaBI	TACGTA	2 cut(s)	1148, 1814
SpeI	ACTAGT	1 cut(s)	1741
Sse9I	AATT	9 cut(s)	58, 467, 657, 734, 921, 1195, 1210, 1662, 1979
SspDI	GGCGCC	1 cut(s)	332
SspI	AATATT	1 cut(s)	1617
SspMI	CTAG	6 cut(s)	650, 915, 1080, 1544, 1742, 1943
SstI	GAGCTC	2 cut(s)	126, 1482
StyD4I	CCNGG	4 cut(s)	219, 426, 877, 1275
StyI	CCWWGG	2 cut(s)	1024, 1239
TaaI	ACNGT	1 cut(s)	1347
TaiI	ACGT	6 cut(s)	400, 1021, 1146, 1150, 1816, 1950
TaqI	TCGA	4 cut(s)	300, 324, 776, 936
TasI	AATT	9 cut(s)	58, 467, 657, 734, 921, 1195, 1210, 1662, 1979
TauI	GCSGC	2 cut(s)	200, 272
TfiI	GAWTC	4 cut(s)	644, 1000, 1083, 1391
TscAI	CASTG	4 cut(s)	1047, 1352, 1936, 1999
TseFI	GTSAC	1 cut(s)	1511
TseI	GCWGC	4 cut(s)	272, 1154, 1283, 1820
Tsp45I	GTSAC	1 cut(s)	1511
TspRI	CASTG	4 cut(s)	1047, 1352, 1936, 1999
Vha464I	CTTAAG	1 cut(s)	1168
VneI	GTGCAC	1 cut(s)	393
XapI	RAATTY	3 cut(s)	467, 1195, 1662
XbaI	TCTAGA	1 cut(s)	1079
XmnI	GAANNNNTTC	2 cut(s)	471, 1019
XspI	CTAG	6 cut(s)	650, 915, 1080, 1544, 1742, 1943
Zsp2I	ATGCAT	2 cut(s)	1737, 1870

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.