Belongs to the class-I aminoacyl-tRNA synthetase family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g33690 FvH4_4g33700 |
| rosa_chinensis | RchiOBHm_Chr4g0443171 |
| rosa_laevigata | RLG00000005950 |
| rosa_multiflora | Rmu_sc0007968.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00383770 |
| rosa_rugosa | Rorug04G0344700 |
| rosa_samantha | Rh4BG410800 Rh4CG426300 Rh4DG405900 |
| rosa_wichuraiana | Rw4G034420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 635 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 552 |
| AccBSI | CCGCTC | 1 cut(s) | 1259 |
| AccII | CGCG | 2 cut(s) | 39, 1282 |
| AciI | CCGC | 2 cut(s) | 659, 1257 |
| AclWI | GGATC | 2 cut(s) | 684, 1228 |
| AcoI | YGGCCR | 1 cut(s) | 1254 |
| AcsI | RAATTY | 6 cut(s) | 134, 146, 347, 377, 986, 1048 |
| AcuI | CTGAAG | 6 cut(s) | 30, 375, 1134, 1555, 1626, 1692 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 552, 1742 |
| AflIII | ACRYGT | 2 cut(s) | 626, 1199 |
| AgsI | TTSAA | 6 cut(s) | 539, 744, 772, 789, 967, 1012 |
| AjnI | CCWGG | 5 cut(s) | 54, 124, 516, 1171, 1542 |
| Alw21I | GWGCWC | 1 cut(s) | 26 |
| Alw26I | GTCTC | 3 cut(s) | 11, 1443, 1621 |
| AlwI | GGATC | 2 cut(s) | 684, 1228 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 314 |
| Ama87I | CYCGRG | 1 cut(s) | 1440 |
| AoxI | GGCC | 2 cut(s) | 716, 1254 |
| ApeKI | GCWGC | 4 cut(s) | 5, 386, 484, 1015 |
| ApoI | RAATTY | 6 cut(s) | 134, 146, 347, 377, 986, 1048 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 428, 460 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 101 |
| AspLEI | GCGC | 2 cut(s) | 39, 1282 |
| AspS9I | GGNCC | 3 cut(s) | 416, 477, 1349 |
| AsuHPI | GGTGA | 5 cut(s) | 26, 715, 1161, 1558, 1757 |
| AvaI | CYCGRG | 1 cut(s) | 1440 |
| AvaII | GGWCC | 3 cut(s) | 416, 477, 1349 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 547, 580 |
| BanII | GRGCYC | 2 cut(s) | 26, 997 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 1791 |
| Bbv12I | GWGCWC | 1 cut(s) | 26 |
| BbvI | GCAGC | 4 cut(s) | 17, 373, 496, 1002 |
| BccI | CCATC | 3 cut(s) | 257, 347, 1675 |
| BciT130I | CCWGG | 5 cut(s) | 56, 126, 518, 1173, 1544 |
| BciVI | GTATCC | 1 cut(s) | 1507 |
| BcoDI | GTCTC | 3 cut(s) | 11, 1443, 1621 |
| BfaI | CTAG | 2 cut(s) | 194, 846 |
| BfmI | CTRYAG | 4 cut(s) | 387, 921, 1043, 1425 |
| BfuI | GTATCC | 1 cut(s) | 1507 |
| BglII | AGATCT | 1 cut(s) | 1117 |
| BisI | GCNGC | 5 cut(s) | 6, 387, 485, 1016, 1257 |
| BlsI | GCNGC | 5 cut(s) | 7, 388, 486, 1017, 1258 |
| BmcAI | AGTACT | 3 cut(s) | 1038, 1697, 1722 |
| Bme1390I | CCNGG | 5 cut(s) | 56, 126, 518, 1173, 1544 |
| Bme18I | GGWCC | 3 cut(s) | 416, 477, 1349 |
| BmeT110I | CYCGRG | 1 cut(s) | 1440 |
| BmgT120I | GGNCC | 3 cut(s) | 416, 477, 1349 |
| BmiI | GGNNCC | 3 cut(s) | 418, 1350, 1541 |
| BmrFI | CCNGG | 5 cut(s) | 56, 126, 518, 1173, 1544 |
| BmsI | GCATC | 1 cut(s) | 718 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 8, 40, 36, 68 |
| BpmI | CTGGAG | 4 cut(s) | 691, 717, 734, 819 |
| BpuEI | CTTGAG | 2 cut(s) | 981, 1693 |
| BsaJI | CCNNGG | 1 cut(s) | 516 |
| BsaWI | WCCGGW | 1 cut(s) | 1138 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 552, 1742 |
| Bse1I | ACTGG | 5 cut(s) | 199, 502, 719, 1703, 1747 |
| Bse3DI | GCAATG | 5 cut(s) | 303, 462, 591, 1562, 1758 |
| BseBI | CCWGG | 5 cut(s) | 56, 126, 518, 1173, 1544 |
| BseDI | CCNNGG | 1 cut(s) | 516 |
| BseGI | GGATG | 4 cut(s) | 26, 339, 622, 1418 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 552, 1742 |
| BseMI | GCAATG | 5 cut(s) | 303, 462, 591, 1562, 1758 |
| BseMII | CTCAG | 1 cut(s) | 1611 |
| BseNI | ACTGG | 5 cut(s) | 199, 502, 719, 1703, 1747 |
| BseRI | GAGGAG | 1 cut(s) | 1715 |
| BseXI | GCAGC | 4 cut(s) | 17, 373, 496, 1002 |
| BsgI | GTGCAG | 1 cut(s) | 641 |
| Bsh1236I | CGCG | 2 cut(s) | 39, 1282 |
| BshFI | GGCC | 2 cut(s) | 718, 1256 |
| BsiHKAI | GWGCWC | 1 cut(s) | 26 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1440 |
| BsiSI | CCGG | 1 cut(s) | 1139 |
| BslFI | GGGAC | 1 cut(s) | 402 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 552, 1742 |
| BsmAI | GTCTC | 3 cut(s) | 11, 1443, 1621 |
| BsmBI | CGTCTC | 1 cut(s) | 11 |
| BsmFI | GGGAC | 1 cut(s) | 402 |
| BsmI | GAATGC | 1 cut(s) | 712 |
| BsnI | GGCC | 2 cut(s) | 718, 1256 |
| BsoBI | CYCGRG | 1 cut(s) | 1440 |
| Bsp1286I | GDGCHC | 2 cut(s) | 26, 997 |
| Bsp1407I | TGTACA | 1 cut(s) | 684 |
| Bsp143I | GATC | 4 cut(s) | 676, 1117, 1220, 1623 |
| BspACI | CCGC | 2 cut(s) | 659, 1257 |
| BspANI | GGCC | 2 cut(s) | 718, 1256 |
| BspCNI | CTCAG | 1 cut(s) | 1612 |
| BspFNI | CGCG | 2 cut(s) | 39, 1282 |
| BspLI | GGNNCC | 3 cut(s) | 418, 1350, 1541 |
| BspMAI | CTGCAG | 1 cut(s) | 391 |
| BspPI | GGATC | 2 cut(s) | 684, 1228 |
| BsrBI | CCGCTC | 1 cut(s) | 1259 |
| BsrDI | GCAATG | 5 cut(s) | 303, 462, 591, 1562, 1758 |
| BsrGI | TGTACA | 1 cut(s) | 684 |
| BsrI | ACTGG | 5 cut(s) | 199, 502, 719, 1703, 1747 |
| BssECI | CCNNGG | 1 cut(s) | 516 |
| BssMI | GATC | 4 cut(s) | 676, 1117, 1220, 1623 |
| Bst2UI | CCWGG | 5 cut(s) | 56, 126, 518, 1173, 1544 |
| Bst4CI | ACNGT | 2 cut(s) | 271, 593 |
| Bst6I | CTCTTC | 4 cut(s) | 351, 1196, 1334, 1490 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 335 |
| BstAUI | TGTACA | 1 cut(s) | 684 |
| BstDEI | CTNAG | 6 cut(s) | 598, 871, 1003, 1236, 1476, 1620 |
| BstF5I | GGATG | 4 cut(s) | 26, 339, 622, 1418 |
| BstFNI | CGCG | 2 cut(s) | 39, 1282 |
| BstHHI | GCGC | 2 cut(s) | 39, 1282 |
| BstKTI | GATC | 4 cut(s) | 679, 1120, 1223, 1626 |
| BstMAI | GTCTC | 3 cut(s) | 11, 1443, 1621 |
| BstMBI | GATC | 4 cut(s) | 676, 1117, 1220, 1623 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 335, 1610 |
| BstNI | CCWGG | 5 cut(s) | 56, 126, 518, 1173, 1544 |
| BstNSI | RCATGY | 4 cut(s) | 630, 903, 1203, 1555 |
| BstSCI | CCNGG | 5 cut(s) | 54, 124, 516, 1171, 1542 |
| BstSFI | CTRYAG | 4 cut(s) | 387, 921, 1043, 1425 |
| BstUI | CGCG | 2 cut(s) | 39, 1282 |
| BstV1I | GCAGC | 4 cut(s) | 17, 373, 496, 1002 |
| BstX2I | RGATCY | 3 cut(s) | 676, 1117, 1220 |
| BstYI | RGATCY | 3 cut(s) | 676, 1117, 1220 |
| BsuI | GTATCC | 1 cut(s) | 1507 |
| BsuRI | GGCC | 2 cut(s) | 718, 1256 |
| BtsCI | GGATG | 4 cut(s) | 26, 339, 622, 1418 |
| BtsI | GCAGTG | 1 cut(s) | 32 |
| BtsIMutI | CAGTG | 3 cut(s) | 32, 112, 351 |
| CaiI | CAGNNNCTG | 1 cut(s) | 314 |
| CfoI | GCGC | 2 cut(s) | 39, 1282 |
| Cfr13I | GGNCC | 3 cut(s) | 416, 477, 1349 |
| DdeI | CTNAG | 6 cut(s) | 598, 871, 1003, 1236, 1476, 1620 |
| DpnI | GATC | 4 cut(s) | 678, 1119, 1222, 1625 |
| DpnII | GATC | 4 cut(s) | 676, 1117, 1220, 1623 |
| EaeI | YGGCCR | 1 cut(s) | 1254 |
| Eam1104I | CTCTTC | 4 cut(s) | 351, 1196, 1334, 1490 |
| EarI | CTCTTC | 4 cut(s) | 351, 1196, 1334, 1490 |
| Ecl136II | GAGCTC | 1 cut(s) | 24 |
| Eco24I | GRGCYC | 2 cut(s) | 26, 997 |
| Eco32I | GATATC | 1 cut(s) | 363 |
| Eco47I | GGWCC | 3 cut(s) | 416, 477, 1349 |
| Eco53kI | GAGCTC | 1 cut(s) | 24 |
| Eco57I | CTGAAG | 6 cut(s) | 30, 375, 1134, 1555, 1626, 1692 |
| Eco88I | CYCGRG | 1 cut(s) | 1440 |
| EcoICRI | GAGCTC | 1 cut(s) | 24 |
| EcoRII | CCWGG | 5 cut(s) | 54, 124, 516, 1171, 1542 |
| EcoRV | GATATC | 1 cut(s) | 363 |
| EcoT38I | GRGCYC | 2 cut(s) | 26, 997 |
| Esp3I | CGTCTC | 1 cut(s) | 11 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 680, 712, 1062, 1094, 1469, 1501 |
| FaqI | GGGAC | 1 cut(s) | 402 |
| FauNDI | CATATG | 1 cut(s) | 1581 |
| Fnu4HI | GCNGC | 5 cut(s) | 6, 387, 485, 1016, 1257 |
| FokI | GGATG | 4 cut(s) | 13, 326, 629, 1405 |
| FriOI | GRGCYC | 2 cut(s) | 26, 997 |
| Fsp4HI | GCNGC | 5 cut(s) | 6, 387, 485, 1016, 1257 |
| FspBI | CTAG | 2 cut(s) | 194, 846 |
| GlaI | GCGC | 2 cut(s) | 38, 1281 |
| GluI | GCNGC | 5 cut(s) | 6, 387, 485, 1016, 1257 |
| GsuI | CTGGAG | 4 cut(s) | 691, 717, 734, 819 |
| HaeIII | GGCC | 2 cut(s) | 718, 1256 |
| HapII | CCGG | 1 cut(s) | 1139 |
| HhaI | GCGC | 2 cut(s) | 39, 1282 |
| Hin6I | GCGC | 2 cut(s) | 37, 1280 |
| HinP1I | GCGC | 2 cut(s) | 37, 1280 |
| HinfI | GANTC | 9 cut(s) | 311, 398, 512, 521, 740, 785, 1160, 1342, 1706 |
| HpaII | CCGG | 1 cut(s) | 1139 |
| HphI | GGTGA | 5 cut(s) | 26, 715, 1161, 1558, 1757 |
| Hpy166II | GTNNAC | 2 cut(s) | 650, 1549 |
| Hpy188I | TCNGA | 4 cut(s) | 471, 1405, 1621, 1782 |
| Hpy8I | GTNNAC | 2 cut(s) | 650, 1549 |
| HpyAV | CCTTC | 4 cut(s) | 5, 432, 817, 1667 |
| HpyCH4III | ACNGT | 2 cut(s) | 271, 593 |
| HpyCH4IV | ACGT | 1 cut(s) | 888 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 335, 1610 |
| HpyF3I | CTNAG | 6 cut(s) | 598, 871, 1003, 1236, 1476, 1620 |
| HpySE526I | ACGT | 1 cut(s) | 888 |
| HspAI | GCGC | 2 cut(s) | 37, 1280 |
| Kzo9I | GATC | 4 cut(s) | 676, 1117, 1220, 1623 |
| LmnI | GCTCC | 3 cut(s) | 736, 838, 1545 |
| Lsp1109I | GCAGC | 4 cut(s) | 17, 373, 496, 1002 |
| LweI | GCATC | 1 cut(s) | 718 |
| MaeI | CTAG | 2 cut(s) | 194, 846 |
| MaeII | ACGT | 1 cut(s) | 888 |
| MaeIII | GTNAC | 3 cut(s) | 128, 593, 1798 |
| MalI | GATC | 4 cut(s) | 678, 1119, 1222, 1625 |
| MbiI | CCGCTC | 1 cut(s) | 1259 |
| MboI | GATC | 4 cut(s) | 676, 1117, 1220, 1623 |
| MflI | RGATCY | 3 cut(s) | 676, 1117, 1220 |
| MhlI | GDGCHC | 2 cut(s) | 26, 997 |
| MlyI | GAGTC | 2 cut(s) | 1351, 1700 |
| MmeI | TCCRAC | 1 cut(s) | 1683 |
| MroXI | GAANNNNTTC | 1 cut(s) | 101 |
| MseI | TTAA | 7 cut(s) | 779, 891, 984, 1062, 1143, 1301, 1587 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1782 |
| MspA1I | CMGCKG | 1 cut(s) | 8 |
| MspI | CCGG | 1 cut(s) | 1139 |
| MspR9I | CCNGG | 5 cut(s) | 56, 126, 518, 1173, 1544 |
| Mva1269I | GAATGC | 1 cut(s) | 712 |
| MvaI | CCWGG | 5 cut(s) | 56, 126, 518, 1173, 1544 |
| MvnI | CGCG | 2 cut(s) | 39, 1282 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 335, 1610 |
| NdeI | CATATG | 1 cut(s) | 1581 |
| NdeII | GATC | 4 cut(s) | 676, 1117, 1220, 1623 |
| NlaIV | GGNNCC | 3 cut(s) | 418, 1350, 1541 |
| NmuCI | GTSAC | 1 cut(s) | 593 |
| NspI | RCATGY | 4 cut(s) | 630, 903, 1203, 1555 |
| PaeR7I | CTCGAG | 1 cut(s) | 1440 |
| PciI | ACATGT | 2 cut(s) | 626, 1199 |
| PctI | GAATGC | 1 cut(s) | 712 |
| PdmI | GAANNNNTTC | 1 cut(s) | 101 |
| PfeI | GAWTC | 7 cut(s) | 311, 398, 512, 521, 740, 785, 1160 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 552 |
| PfoI | TCCNGGA | 1 cut(s) | 54 |
| PkrI | GCNGC | 5 cut(s) | 7, 388, 486, 1017, 1258 |
| PleI | GAGTC | 2 cut(s) | 1350, 1700 |
| PpsI | GAGTC | 2 cut(s) | 1350, 1700 |
| PscI | ACATGT | 2 cut(s) | 626, 1199 |
| PsiI | TTATAA | 1 cut(s) | 635 |
| Psp124BI | GAGCTC | 1 cut(s) | 26 |
| Psp6I | CCWGG | 5 cut(s) | 54, 124, 516, 1171, 1542 |
| PspGI | CCWGG | 5 cut(s) | 54, 124, 516, 1171, 1542 |
| PspN4I | GGNNCC | 3 cut(s) | 418, 1350, 1541 |
| PspPI | GGNCC | 3 cut(s) | 416, 477, 1349 |
| PstI | CTGCAG | 1 cut(s) | 391 |
| PstNI | CAGNNNCTG | 1 cut(s) | 314 |
| PsuI | RGATCY | 3 cut(s) | 676, 1117, 1220 |
| PvuII | CAGCTG | 1 cut(s) | 8 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1782 |
| SacI | GAGCTC | 1 cut(s) | 26 |
| SaqAI | TTAA | 7 cut(s) | 779, 891, 984, 1062, 1143, 1301, 1587 |
| SatI | GCNGC | 5 cut(s) | 6, 387, 485, 1016, 1257 |
| Sau3AI | GATC | 4 cut(s) | 676, 1117, 1220, 1623 |
| Sau96I | GGNCC | 3 cut(s) | 416, 477, 1349 |
| ScaI | AGTACT | 3 cut(s) | 1038, 1697, 1722 |
| SchI | GAGTC | 2 cut(s) | 1351, 1700 |
| ScrFI | CCNGG | 5 cut(s) | 56, 126, 518, 1173, 1544 |
| SduI | GDGCHC | 2 cut(s) | 26, 997 |
| SfaNI | GCATC | 1 cut(s) | 718 |
| SfcI | CTRYAG | 4 cut(s) | 387, 921, 1043, 1425 |
| Sfr274I | CTCGAG | 1 cut(s) | 1440 |
| SinI | GGWCC | 3 cut(s) | 416, 477, 1349 |
| SlaI | CTCGAG | 1 cut(s) | 1440 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1782 |
| SmlI | CTYRAG | 3 cut(s) | 996, 1440, 1708 |
| SmoI | CTYRAG | 3 cut(s) | 996, 1440, 1708 |
| SsiI | CCGC | 2 cut(s) | 659, 1257 |
| SspMI | CTAG | 2 cut(s) | 194, 846 |
| SstI | GAGCTC | 1 cut(s) | 26 |
| StyD4I | CCNGG | 5 cut(s) | 54, 124, 516, 1171, 1542 |
| TaaI | ACNGT | 2 cut(s) | 271, 593 |
| TaiI | ACGT | 1 cut(s) | 891 |
| TaqI | TCGA | 4 cut(s) | 76, 508, 1316, 1441 |
| TaqII | GACCGA | 1 cut(s) | 1064 |
| TatI | WGTACW | 4 cut(s) | 684, 1036, 1695, 1720 |
| TauI | GCSGC | 1 cut(s) | 1259 |
| TfiI | GAWTC | 7 cut(s) | 311, 398, 512, 521, 740, 785, 1160 |
| Tru1I | TTAA | 7 cut(s) | 779, 891, 984, 1062, 1143, 1301, 1587 |
| Tru9I | TTAA | 7 cut(s) | 779, 891, 984, 1062, 1143, 1301, 1587 |
| TscAI | CASTG | 3 cut(s) | 39, 112, 358 |
| TseFI | GTSAC | 1 cut(s) | 593 |
| TseI | GCWGC | 4 cut(s) | 5, 386, 484, 1015 |
| Tsp45I | GTSAC | 1 cut(s) | 593 |
| TspDTI | ATGAA | 7 cut(s) | 387, 555, 602, 806, 1300, 1749, 1766 |
| TspGWI | ACGGA | 1 cut(s) | 1800 |
| TspRI | CASTG | 3 cut(s) | 39, 112, 358 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 552 |
| VpaK11BI | GGWCC | 3 cut(s) | 416, 477, 1349 |
| XapI | RAATTY | 6 cut(s) | 134, 146, 347, 377, 986, 1048 |
| XceI | RCATGY | 4 cut(s) | 630, 903, 1203, 1555 |
| XhoI | CTCGAG | 1 cut(s) | 1440 |
| XmnI | GAANNNNTTC | 1 cut(s) | 101 |
| XspI | CTAG | 2 cut(s) | 194, 846 |
| ZrmI | AGTACT | 3 cut(s) | 1038, 1697, 1722 |