RLG00000005950

Belongs to the class-I aminoacyl-tRNA synthetase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0018032
Physical Location & Seq
Forward (+)
3001234 .. 3004243
3010 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005950

Sequence Viewer

Length: 1938 bp
ATGGCAGCTGAAGGTGAGACGAGCTCATCCACACTGCGCAATAAAGAGTGTCTCCTGGAAATTGAGGCTAAAGTTCGAGAATGGTGGGAAAACAAGAAAGTTTTCAGTGCTGAATGTGAAAAGCCTGGGGACAAATTCTTTGGAAAATTCCCCTTTGATAGCTTTATGGGAAATCCATTCTCACTCTCCAAGCTAGACCAGTCTGCATATCTACCAGCTTTTCCTGTTGATGTCATGCGATTTGCTTTGGCGTATGTTTGTGATGAATCTGTATTTGATACTGCAACTACTGCCATCCTAAAATTCACTGAAGAGATATCATGGCATGAAGAATTTTTGGCTGCAGATTTTGATTCTTGTTTGAGATGTGGTCCCCCTTCTACTTTCGCAGACAAGGTGTTTGCCAATGAGATAAACATTGCTTTGAACAGGACCAAGCAGCAATACGAGGCTGACCAGTTTCGAGAAGCCCTGAATTCTATTTTTGAGCTTCAAGATGCCAGAAATTGGTACAAGAGTTCATGTGGTGGTACCAATGCAATGAACCGTGACTTAGTGTGGCAATATGTCTGGAGGGATCTTTTGTACAAGATAGACTTTGTGGTGAATGCAGACTGGCCTGTGGCTGATGCTCCAGATGATTCAACCCTCCAGAGTGCCAATAAGTATTTGAAAGACTTCATTGATTCAATGAAGAAGCAGATTGAAATTGAGAGAAACAAGAAGGGTACTGCCCCAGCTACATCTAGTTTGAAAGAAGAAAGCCAAAACTTAGAAGCTCTTATATACGTTAATGAGGCATGTGGTACTCTTACTTTTGCTACAGAGGGATTGCATACAGATTATGGACAAAACGAAGATGAGTTGAAGCAGAATGAGGGGGTTAAATTTGAGGCTCAAGCCTTAGACTTGAAGCTGCCATTTAGAGAGATTAGAGTGCTTCTACAGAATTTGGACTTTATTAACAGGGAAATCGGTCTTGACAAGGTGCAAGTTTTATCAGCTACCAACCCTGATGATCTTGCTAAAGCTGGTTCTCCTGTTAAAATAATAGAAGCTGAATCTTCCTCACTTGGAAATCCAGCTATTCTCTTCTTGACATGTCCAAAAAGTGATTGTGGATCGTTTGGTACTTCTAAGACTACACCAATAATGGCCGCTCTATCCTCATCTGGTTGTGCGCGAACGCACATCAACCCTTTAACCAAGTTCATGTCGAAGCCAAAGTGTAATGATGAGAAGAGTCGGGAAAAACATCTTGCATGGGAAACATCTGACCACCATGATACATCCACTATAGATGAGAAGTCTCGAGATAATCCTGCTTCCTTGTATCTCCCTCCCTCTAAGCTACTCTTCCAGAGTACCTTTGATGAGGCATTGGATACTGCTTGTAATCAAGACAAATGGCTCCTGGTGAACATGCAATGTGTGGATAATTTCAGCTTACATATGCTTAATCAACACATCTGGGCTGAAGAAGCTGTCTCTGAGATCATTAGTACCAATTTTATCTTTTGGCACGAGTATTTTGATACACCTGAAGGTAAGATGGTTGCCAGAAAGTACTGGTTGGACTCAAGAACCATAGTACTCCTCATTGACCCCATGACTGGTGAAGCAATGTGTTCATGGAATGGAATGGTTCATCGGAATGATTTTGTGGAGGATCTGGTACCATACCTGGAGAGAAGCCCCAAGAATAATTTCATAACTAAAGAAGAAGAGAACGAACTACTCGCATTTGCAGCTTCCATGGAAAGCATGGAGTCGGAGACAGGTAGTGGAAGTACGTCCAAAGAGGATCTAGTACCATTCTGGAATAGTAGCCCGTGGAGTACTTCTCCAACTCAAGAAGACGAGGAATTGGCAGTTTTCACGGAAAGCATGAAGTTGGAAACAAGTAGTCCAACTAGTTCCAAAGCAAAAGTCGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0001101 GO:0003674 GO:0003824 GO:0004812 GO:0004819 GO:0004823 GO:0004832 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0005829 GO:0005911 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006425 GO:0006429 GO:0006438 GO:0006518 GO:0006520 GO:0006605 GO:0006622 GO:0006623 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0007034 GO:0007041 GO:0007154 GO:0008047 GO:0008104 GO:0008150 GO:0008152 GO:0008361 GO:0009058 GO:0009059 GO:0009267 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009719 GO:0009892 GO:0009894 GO:0009895 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010467 GO:0010506 GO:0010507 GO:0010646 GO:0010647 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016070 GO:0016604 GO:0016874 GO:0016875 GO:0017101 GO:0019222 GO:0019538 GO:0019752 GO:0023051 GO:0023056 GO:0030054 GO:0030234 GO:0030695 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032006 GO:0032008 GO:0032535 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034198 GO:0034613 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0042594 GO:0042886 GO:0043038 GO:0043039 GO:0043043 GO:0043085 GO:0043087 GO:0043170 GO:0043200 GO:0043201 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043547 GO:0043603 GO:0043604 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0060589 GO:0061462 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071233 GO:0071310 GO:0071417 GO:0071495 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0090066 GO:0090304 GO:0098772 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1903432 GO:1904263 GO:1990253 GO:1990928
KEGG Pathways
Metabolic & Signaling
ko00970 map00970
Pfam Domains
Protein Families
Anticodon_1 tRNA-synt_1

Protein Analysis

646

Amino Acids

72.88

Weight (kDa)

4.69

Isoelectric Point (pI)

48.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thioredoxin_7 PF13899 454 - 518 8.3e-07 Thioredoxin-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0018032)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g33690 FvH4_4g33700
rosa_chinensis RchiOBHm_Chr4g0443171
rosa_laevigata RLG00000005950
rosa_multiflora Rmu_sc0007968.1_g000006
rosa_roxburghii Rroxscaffold_5G00383770
rosa_rugosa Rorug04G0344700
rosa_samantha Rh4BG410800 Rh4CG426300 Rh4DG405900
rosa_wichuraiana Rw4G034420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 38
Acc65I GGTACC 2 cut(s) 530, 1675
AccB1I GGYRCC 2 cut(s) 530, 1675
AccB7I CCANNNNNTGG 1 cut(s) 507
AccBSI CCGCTC 1 cut(s) 1160
AccI GTMKAC 1 cut(s) 1932
AccII CGCG 1 cut(s) 1183
AciI CCGC 1 cut(s) 1158
AclWI GGATC 4 cut(s) 585, 1129, 1677, 1812
AcoI YGGCCR 1 cut(s) 1155
AcsI RAATTY 7 cut(s) 134, 146, 302, 332, 475, 887, 949
AcuI CTGAAG 4 cut(s) 30, 330, 1497, 1563
AfiI CCNNNNNNNGG 2 cut(s) 507, 1613
AflIII ACRYGT 1 cut(s) 1100
AgsI TTSAA 9 cut(s) 427, 494, 645, 673, 690, 707, 754, 868, 913
AhlI ACTAGT 1 cut(s) 1913
AjnI CCWGG 4 cut(s) 54, 124, 1413, 1683
AjuI GAANNNNNNNTTGG 2 cut(s) 1691, 1723
Alw21I GWGCWC 1 cut(s) 26
Alw26I GTCTC 5 cut(s) 11, 56, 1314, 1492, 1769
AlwI GGATC 4 cut(s) 585, 1129, 1677, 1812
Ama87I CYCGRG 1 cut(s) 1311
AoxI GGCC 2 cut(s) 617, 1155
ApeKI GCWGC 5 cut(s) 5, 341, 439, 916, 1748
ApoI RAATTY 7 cut(s) 134, 146, 302, 332, 475, 887, 949
ArsI GACNNNNNNTTYG 5 cut(s) 122, 154, 383, 415, 1914
Asp700I GAANNNNTTC 3 cut(s) 101, 677, 1706
Asp718I GGTACC 2 cut(s) 530, 1675
AspLEI GCGC 2 cut(s) 39, 1183
AspS9I GGNCC 2 cut(s) 371, 432
AsuHPI GGTGA 4 cut(s) 26, 616, 1429, 1628
AvaI CYCGRG 1 cut(s) 1311
AvaII GGWCC 2 cut(s) 371, 432
BaeI ACNNNNGTAYC 2 cut(s) 502, 535
BanI GGYRCC 2 cut(s) 530, 1675
BanII GRGCYC 1 cut(s) 26
BauI CACGAG 1 cut(s) 1523
BbsI GAAGAC 1 cut(s) 1863
Bbv12I GWGCWC 1 cut(s) 26
BbvI GCAGC 5 cut(s) 17, 328, 451, 903, 1760
BccI CCATC 2 cut(s) 302, 1546
BciT130I CCWGG 4 cut(s) 56, 126, 1415, 1685
BciVI GTATCC 1 cut(s) 1378
BcoDI GTCTC 5 cut(s) 11, 56, 1314, 1492, 1769
BcuI ACTAGT 1 cut(s) 1913
BfaI CTAG 5 cut(s) 194, 747, 1808, 1914, 1936
BfmI CTRYAG 4 cut(s) 342, 822, 944, 1296
BfuI GTATCC 1 cut(s) 1378
BisI GCNGC 6 cut(s) 6, 342, 440, 917, 1158, 1749
BlsI GCNGC 6 cut(s) 7, 343, 441, 918, 1159, 1750
BmcAI AGTACT 3 cut(s) 1568, 1593, 1840
Bme1390I CCNGG 4 cut(s) 56, 126, 1415, 1685
Bme18I GGWCC 2 cut(s) 371, 432
BmeT110I CYCGRG 1 cut(s) 1311
BmgT120I GGNCC 2 cut(s) 371, 432
BmiI GGNNCC 4 cut(s) 373, 532, 1412, 1677
BmrFI CCNGG 4 cut(s) 56, 126, 1415, 1685
BmsI GCATC 2 cut(s) 487, 619
BpiI GAAGAC 1 cut(s) 1863
BplI GAGNNNNNCTC 4 cut(s) 8, 40, 1828, 1860
BpmI CTGGAG 4 cut(s) 592, 618, 635, 1706
BpuEI CTTGAG 3 cut(s) 882, 1564, 1836
BsaJI CCNNGG 3 cut(s) 125, 1755, 1832
Bsc4I CCNNNNNNNGG 2 cut(s) 507, 1613
Bse1I ACTGG 5 cut(s) 199, 457, 620, 1574, 1618
Bse3DI GCAATG 4 cut(s) 417, 546, 1433, 1629
BseBI CCWGG 4 cut(s) 56, 126, 1415, 1685
BseDI CCNNGG 3 cut(s) 125, 1755, 1832
BseGI GGATG 3 cut(s) 26, 294, 1289
BseLI CCNNNNNNNGG 2 cut(s) 507, 1613
BseMI GCAATG 4 cut(s) 417, 546, 1433, 1629
BseMII CTCAG 1 cut(s) 1482
BseNI ACTGG 5 cut(s) 199, 457, 620, 1574, 1618
BseRI GAGGAG 1 cut(s) 1586
BseXI GCAGC 5 cut(s) 17, 328, 451, 903, 1760
BseYI CCCAGC 1 cut(s) 736
Bsh1236I CGCG 1 cut(s) 1183
BshFI GGCC 2 cut(s) 619, 1157
BshNI GGYRCC 2 cut(s) 530, 1675
BsiHKAI GWGCWC 1 cut(s) 26
BsiHKCI CYCGRG 1 cut(s) 1311
BslFI GGGAC 2 cut(s) 143, 357
BslI CCNNNNNNNGG 2 cut(s) 507, 1613
BsmAI GTCTC 5 cut(s) 11, 56, 1314, 1492, 1769
BsmBI CGTCTC 1 cut(s) 11
BsmFI GGGAC 2 cut(s) 143, 357
BsmI GAATGC 1 cut(s) 613
BsnI GGCC 2 cut(s) 619, 1157
BsoBI CYCGRG 1 cut(s) 1311
Bsp1286I GDGCHC 1 cut(s) 26
Bsp1407I TGTACA 1 cut(s) 585
Bsp143I GATC 6 cut(s) 577, 1018, 1121, 1494, 1669, 1804
Bsp19I CCATGG 1 cut(s) 1755
BspACI CCGC 1 cut(s) 1158
BspANI GGCC 2 cut(s) 619, 1157
BspCNI CTCAG 1 cut(s) 1483
BspFNI CGCG 1 cut(s) 1183
BspLI GGNNCC 4 cut(s) 373, 532, 1412, 1677
BspMAI CTGCAG 1 cut(s) 346
BspPI GGATC 4 cut(s) 585, 1129, 1677, 1812
BspT107I GGYRCC 2 cut(s) 530, 1675
BsrBI CCGCTC 1 cut(s) 1160
BsrDI GCAATG 4 cut(s) 417, 546, 1433, 1629
BsrGI TGTACA 1 cut(s) 585
BsrI ACTGG 5 cut(s) 199, 457, 620, 1574, 1618
BssECI CCNNGG 3 cut(s) 125, 1755, 1832
BssMI GATC 6 cut(s) 577, 1018, 1121, 1494, 1669, 1804
BssSI CACGAG 1 cut(s) 1523
BssT1I CCWWGG 1 cut(s) 1755
Bst2BI CACGAG 1 cut(s) 1523
Bst2UI CCWGG 4 cut(s) 56, 126, 1415, 1685
Bst4CI ACNGT 1 cut(s) 548
Bst6I CTCTTC 5 cut(s) 306, 1097, 1235, 1361, 1719
BstAPI GCANNNNNTGC 1 cut(s) 290
BstAUI TGTACA 1 cut(s) 585
BstDEI CTNAG 6 cut(s) 553, 772, 904, 1137, 1347, 1491
BstDSI CCRYGG 2 cut(s) 1755, 1832
BstF5I GGATG 3 cut(s) 26, 294, 1289
BstFNI CGCG 1 cut(s) 1183
BstHHI GCGC 2 cut(s) 39, 1183
BstKTI GATC 6 cut(s) 580, 1021, 1124, 1497, 1672, 1807
BstMAI GTCTC 5 cut(s) 11, 56, 1314, 1492, 1769
BstMBI GATC 6 cut(s) 577, 1018, 1121, 1494, 1669, 1804
BstMWI GCNNNNNNNGC 3 cut(s) 290, 1481, 1748
BstNI CCWGG 4 cut(s) 56, 126, 1415, 1685
BstNSI RCATGY 3 cut(s) 804, 1104, 1426
BstSCI CCNGG 4 cut(s) 54, 124, 1413, 1683
BstSFI CTRYAG 4 cut(s) 342, 822, 944, 1296
BstUI CGCG 1 cut(s) 1183
BstV1I GCAGC 5 cut(s) 17, 328, 451, 903, 1760
BstV2I GAAGAC 1 cut(s) 1863
BstX2I RGATCY 3 cut(s) 577, 1669, 1804
BstYI RGATCY 3 cut(s) 577, 1669, 1804
BsuI GTATCC 1 cut(s) 1378
BsuRI GGCC 2 cut(s) 619, 1157
BtgI CCRYGG 2 cut(s) 1755, 1832
BtsCI GGATG 3 cut(s) 26, 294, 1289
BtsI GCAGTG 1 cut(s) 32
BtsIMutI CAGTG 3 cut(s) 32, 112, 306
CfoI GCGC 2 cut(s) 39, 1183
Cfr13I GGNCC 2 cut(s) 371, 432
DdeI CTNAG 6 cut(s) 553, 772, 904, 1137, 1347, 1491
DpnI GATC 6 cut(s) 579, 1020, 1123, 1496, 1671, 1806
DpnII GATC 6 cut(s) 577, 1018, 1121, 1494, 1669, 1804
EaeI YGGCCR 1 cut(s) 1155
Eam1104I CTCTTC 5 cut(s) 306, 1097, 1235, 1361, 1719
EarI CTCTTC 5 cut(s) 306, 1097, 1235, 1361, 1719
Ecl136II GAGCTC 1 cut(s) 24
Eco130I CCWWGG 1 cut(s) 1755
Eco24I GRGCYC 1 cut(s) 26
Eco32I GATATC 1 cut(s) 318
Eco47I GGWCC 2 cut(s) 371, 432
Eco53kI GAGCTC 1 cut(s) 24
Eco57I CTGAAG 4 cut(s) 30, 330, 1497, 1563
Eco88I CYCGRG 1 cut(s) 1311
EcoICRI GAGCTC 1 cut(s) 24
EcoRI GAATTC 1 cut(s) 475
EcoRII CCWGG 4 cut(s) 54, 124, 1413, 1683
EcoRV GATATC 1 cut(s) 318
EcoT14I CCWWGG 1 cut(s) 1755
EcoT38I GRGCYC 1 cut(s) 26
ErhI CCWWGG 1 cut(s) 1755
Esp3I CGTCTC 1 cut(s) 11
FalI AAGNNNNNCTT 4 cut(s) 581, 613, 1340, 1372
FaqI GGGAC 2 cut(s) 143, 357
FauNDI CATATG 1 cut(s) 1452
FblI GTMKAC 1 cut(s) 1932
Fnu4HI GCNGC 6 cut(s) 6, 342, 440, 917, 1158, 1749
FokI GGATG 3 cut(s) 13, 281, 1276
FriOI GRGCYC 1 cut(s) 26
Fsp4HI GCNGC 6 cut(s) 6, 342, 440, 917, 1158, 1749
FspBI CTAG 5 cut(s) 194, 747, 1808, 1914, 1936
FspI TGCGCA 1 cut(s) 38
GlaI GCGC 2 cut(s) 38, 1182
GluI GCNGC 6 cut(s) 6, 342, 440, 917, 1158, 1749
GsaI CCCAGC 1 cut(s) 740
GsuI CTGGAG 4 cut(s) 592, 618, 635, 1706
HaeIII GGCC 2 cut(s) 619, 1157
HhaI GCGC 2 cut(s) 39, 1183
Hin6I GCGC 2 cut(s) 37, 1181
HinP1I GCGC 2 cut(s) 37, 1181
HincII GTYRAC 1 cut(s) 1933
HindII GTYRAC 1 cut(s) 1933
HinfI GANTC 8 cut(s) 266, 353, 641, 686, 1061, 1243, 1577, 1769
HphI GGTGA 4 cut(s) 26, 616, 1429, 1628
Hpy166II GTNNAC 2 cut(s) 1420, 1933
Hpy188I TCNGA 4 cut(s) 1276, 1492, 1653, 1774
Hpy8I GTNNAC 2 cut(s) 1420, 1933
HpyAV CCTTC 4 cut(s) 5, 387, 718, 1538
HpyCH4III ACNGT 1 cut(s) 548
HpyCH4IV ACGT 2 cut(s) 789, 1793
HpyF10VI GCNNNNNNNGC 3 cut(s) 290, 1481, 1748
HpyF3I CTNAG 6 cut(s) 553, 772, 904, 1137, 1347, 1491
HpySE526I ACGT 2 cut(s) 789, 1793
HspAI GCGC 2 cut(s) 37, 1181
KpnI GGTACC 2 cut(s) 534, 1679
Kzo9I GATC 6 cut(s) 577, 1018, 1121, 1494, 1669, 1804
LmnI GCTCC 2 cut(s) 637, 1416
Lsp1109I GCAGC 5 cut(s) 17, 328, 451, 903, 1760
LweI GCATC 2 cut(s) 487, 619
MaeI CTAG 5 cut(s) 194, 747, 1808, 1914, 1936
MaeII ACGT 2 cut(s) 789, 1793
MaeIII GTNAC 1 cut(s) 548
MalI GATC 6 cut(s) 579, 1020, 1123, 1496, 1671, 1806
MbiI CCGCTC 1 cut(s) 1160
MboI GATC 6 cut(s) 577, 1018, 1121, 1494, 1669, 1804
MflI RGATCY 3 cut(s) 577, 1669, 1804
MhlI GDGCHC 1 cut(s) 26
MlyI GAGTC 3 cut(s) 1252, 1571, 1778
MmeI TCCRAC 5 cut(s) 1554, 1752, 1871, 1875, 1934
MroXI GAANNNNTTC 3 cut(s) 101, 677, 1706
MseI TTAA 6 cut(s) 792, 885, 963, 1044, 1202, 1458
MslI CAYNNNNRTG 1 cut(s) 1653
MspA1I CMGCKG 1 cut(s) 8
MspR9I CCNGG 4 cut(s) 56, 126, 1415, 1685
Mva1269I GAATGC 1 cut(s) 613
MvaI CCWGG 4 cut(s) 56, 126, 1415, 1685
MvnI CGCG 1 cut(s) 1183
MwoI GCNNNNNNNGC 3 cut(s) 290, 1481, 1748
NcoI CCATGG 1 cut(s) 1755
NdeI CATATG 1 cut(s) 1452
NdeII GATC 6 cut(s) 577, 1018, 1121, 1494, 1669, 1804
NlaIV GGNNCC 4 cut(s) 373, 532, 1412, 1677
NmuCI GTSAC 1 cut(s) 548
NsbI TGCGCA 1 cut(s) 38
NspI RCATGY 3 cut(s) 804, 1104, 1426
PaeR7I CTCGAG 1 cut(s) 1311
PciI ACATGT 1 cut(s) 1100
PctI GAATGC 1 cut(s) 613
PdmI GAANNNNTTC 3 cut(s) 101, 677, 1706
PfeI GAWTC 5 cut(s) 266, 353, 641, 686, 1061
PflMI CCANNNNNTGG 1 cut(s) 507
PfoI TCCNGGA 1 cut(s) 54
PkrI GCNGC 6 cut(s) 7, 343, 441, 918, 1159, 1750
PleI GAGTC 3 cut(s) 1251, 1571, 1777
PpsI GAGTC 3 cut(s) 1251, 1571, 1777
PscI ACATGT 1 cut(s) 1100
Psp124BI GAGCTC 1 cut(s) 26
Psp6I CCWGG 4 cut(s) 54, 124, 1413, 1683
PspFI CCCAGC 1 cut(s) 736
PspGI CCWGG 4 cut(s) 54, 124, 1413, 1683
PspN4I GGNNCC 4 cut(s) 373, 532, 1412, 1677
PspPI GGNCC 2 cut(s) 371, 432
PstI CTGCAG 1 cut(s) 346
PsuI RGATCY 3 cut(s) 577, 1669, 1804
PvuII CAGCTG 1 cut(s) 8
RseI CAYNNNNRTG 1 cut(s) 1653
SacI GAGCTC 1 cut(s) 26
SalI GTCGAC 1 cut(s) 1931
SaqAI TTAA 6 cut(s) 792, 885, 963, 1044, 1202, 1458
SatI GCNGC 6 cut(s) 6, 342, 440, 917, 1158, 1749
Sau3AI GATC 6 cut(s) 577, 1018, 1121, 1494, 1669, 1804
Sau96I GGNCC 2 cut(s) 371, 432
ScaI AGTACT 3 cut(s) 1568, 1593, 1840
SchI GAGTC 3 cut(s) 1252, 1571, 1778
ScrFI CCNGG 4 cut(s) 56, 126, 1415, 1685
SduI GDGCHC 1 cut(s) 26
SfaNI GCATC 2 cut(s) 487, 619
SfcI CTRYAG 4 cut(s) 342, 822, 944, 1296
Sfr274I CTCGAG 1 cut(s) 1311
SinI GGWCC 2 cut(s) 371, 432
SlaI CTCGAG 1 cut(s) 1311
SmiMI CAYNNNNRTG 1 cut(s) 1653
SmlI CTYRAG 4 cut(s) 897, 1311, 1579, 1851
SmoI CTYRAG 4 cut(s) 897, 1311, 1579, 1851
SpeI ACTAGT 1 cut(s) 1913
SsiI CCGC 1 cut(s) 1158
SspMI CTAG 5 cut(s) 194, 747, 1808, 1914, 1936
SstI GAGCTC 1 cut(s) 26
StyD4I CCNGG 4 cut(s) 54, 124, 1413, 1683
StyI CCWWGG 1 cut(s) 1755
TaaI ACNGT 1 cut(s) 548
TaiI ACGT 2 cut(s) 792, 1796
TaqI TCGA 5 cut(s) 76, 463, 1217, 1312, 1932
TaqII GACCGA 1 cut(s) 965
TatI WGTACW 4 cut(s) 585, 1566, 1591, 1838
TauI GCSGC 1 cut(s) 1160
TfiI GAWTC 5 cut(s) 266, 353, 641, 686, 1061
Tru1I TTAA 6 cut(s) 792, 885, 963, 1044, 1202, 1458
Tru9I TTAA 6 cut(s) 792, 885, 963, 1044, 1202, 1458
TscAI CASTG 3 cut(s) 39, 112, 313
TseFI GTSAC 1 cut(s) 548
TseI GCWGC 5 cut(s) 5, 341, 439, 916, 1748
Tsp45I GTSAC 1 cut(s) 548
TspGWI ACGGA 1 cut(s) 1895
TspRI CASTG 3 cut(s) 39, 112, 313
Van91I CCANNNNNTGG 1 cut(s) 507
VpaK11BI GGWCC 2 cut(s) 371, 432
XapI RAATTY 7 cut(s) 134, 146, 302, 332, 475, 887, 949
XceI RCATGY 3 cut(s) 804, 1104, 1426
XcmI CCANNNNNNNNNTGG 1 cut(s) 1762
XhoI CTCGAG 1 cut(s) 1311
XmiI GTMKAC 1 cut(s) 1932
XmnI GAANNNNTTC 3 cut(s) 101, 677, 1706
XspI CTAG 5 cut(s) 194, 747, 1808, 1914, 1936
ZrmI AGTACT 3 cut(s) 1568, 1593, 1840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.