Rh4CG426300

Belongs to the class-I aminoacyl-tRNA synthetase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0018032
Physical Location & Seq
Reverse (-)
66897714 .. 66900796
3083 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG426300.1

Sequence Viewer

Length: 2154 bp
ATGGAAGATTCTCTCTCCATACTTTACATTGCCGCTGGTGCATTGAATAACATGAAAAGCCTACAGAAAACCAAGATTGCAGATCTAATGGCAGCTGAAGGTGAGACCAGCTCATCCACACTGCGCAATAGAGAGTTTCTCCTGGAAATTGAGGCTAAAGTTCGAGAATGGTGGGAAAACAAGAAAGTTTTCAGTGCTGAATGTGAAAAGCCTGGTTACAAATTCTTTGGAAAATTCCCCTTTGATAGCTTTATGGGAAATCCATTCTCACTCTCCAAGCTAGACCAGTCTGCATATCTACCAGCTTTTCCTGTTGATGTCATGCGATTTGCTTTGGCGTATGTTTGTGATGGTACTGTTGATGAGGCGAAAATCAACTTTCTACATAGCATTGCAGATTCTGTATTTGATACTGCAACTACTGCCATCCTAAAATTCACTGAAGAGATATCATGGCATGAAGAATTTTTGGCTGCAGATTTTGATTCTTGTTTGAGATGTGGTCCCCCTTCTACTTTCGCAGACATGGTGTTTGCCAATGAGATAAACATTGCTTTGAACAGGACCAAGCAGCAATACGAGGCTGACCAGTTTCGAGAAGCCCTGGATTCTATTTTTGAGCTTCAATATGCCAGAAATTGGTACAAGAGTTCATGTGGTGGTACAAATGCAATGAACCGTGACTTAGTGTGGCGTTTTATGGATGTGCAGACATGTCTTATAACTCCAATCTGTCCACACTATGCGGAATATGTCTGGAGGGATCTTTTGTACAAGATAGACTTTGTGGTGAATGCAGACTGGCCTGTGGCTGATGCTCCAGATGATTCAACCCTCCAGAGTGCCAATAAGTATTTGAAAGACTTAATTGATTCAATGAAGAAGCAGACTGAAATTGAGAGAAATAAGAAGGGTACTGCTCCAGCTACATCTAGTTTGATAGAAGAAAGCCAAAACTTAGAAGCTCTTATATACGTTAATGAGGCATGTGATACTCTTACTTTTGCTACAGAGGGATTGCATACAGATTATGGACAAAACGAAGATGAGTTGAAGCAGAATGAGGGGGTTAAATTTGGGGCTCAAGCCTTAGACTTGAAGCTGCCATTTAGAGAGATTAGAGTACTTCTACAGAATTTGGACTTTATTAAGAGGGAAGTCGGTCTTGACAAGGTGCAAGTTTTATCAGCTACCAACCCTGAAGATCTTGCTAAAGCTGGTTCTCCGGTTAAAATAATAGAAGCTGAATCTTCCTCACCTGGAAATCCAGCTATTCTCTTCTTGACATGTCCAAAAAGTGATTGTGGATCTTTTGGTACTTCTAAGACTACACCAATAATGGCCGCTCTATCCTCATCTGGTTGTGCGCGAACGCACATCAACCCTTTAACCAAGTTCATGTCGAAGCCAAAGTGTAATGATGAGAAGAGTCGGGGTCCAGAATGGACTGATGAGCAAAGGGAAGAAAAACATCTTGCATGGGAAACATCTGACCACCATGATACATCCACTATAGATGAGAAGTCTCGAGATAATCCTGCTTCCTTGTATCTCCCTCCCTCTAAGCTACTCTTCCAGAGTACCTTTGATGAAGCATTGGATTCTGCTTGTAATCAAGACAAATGGCTCCTGGTGAACATGCAATGTGTGGATAATTTCAGCTCACATATGCTTAATCAACACATCTGGGCTGAAGAAGCTGTCTCTGAGATCATTAGTACCAATTTTATCTTTTGGCACGAGTATTTTGATACACCTGAAGGTAAGATGGTTGCCAGAAAGTACTGGTTGGACTCAAGAACCATAGTACTCCTCATTGACCCCATGACTGGTGAAGCAATGTGTTCATGGAATGGAATGGTTCATCGGAATGATTTTGTGGAGGATCTAGTACCATACCTGGAGAGAAGCCCCAAGAATAATTTCGTAACTAAAGAAGAAGAGAAGGAACTACTCGCATTGGCAGCTTCCATGGAAAGCATGGAGTCGGAGACAGGTAGCGGAAGTACGTCCAAAGAGGATCTAGTACCATTCTGGAATAGTAGCCCGTGGAGTACTTCTCCAACTCAAGAAGACGAGGAATTGGCAGTTTTCACGGAAAGCATGAAGTGGGAAACAAGTAGTCCAACTAGTTCCAAAGCAAAAGTCGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0001101 GO:0003674 GO:0003824 GO:0004812 GO:0004819 GO:0004823 GO:0004832 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0005829 GO:0005911 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006425 GO:0006429 GO:0006438 GO:0006518 GO:0006520 GO:0006605 GO:0006622 GO:0006623 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0007034 GO:0007041 GO:0007154 GO:0008047 GO:0008104 GO:0008150 GO:0008152 GO:0008361 GO:0009058 GO:0009059 GO:0009267 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009719 GO:0009892 GO:0009894 GO:0009895 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010467 GO:0010506 GO:0010507 GO:0010646 GO:0010647 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016070 GO:0016604 GO:0016874 GO:0016875 GO:0017101 GO:0019222 GO:0019538 GO:0019752 GO:0023051 GO:0023056 GO:0030054 GO:0030234 GO:0030695 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032006 GO:0032008 GO:0032535 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034198 GO:0034613 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0042594 GO:0042886 GO:0043038 GO:0043039 GO:0043043 GO:0043085 GO:0043087 GO:0043170 GO:0043200 GO:0043201 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043547 GO:0043603 GO:0043604 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0060589 GO:0061462 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071233 GO:0071310 GO:0071417 GO:0071495 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0090066 GO:0090304 GO:0098772 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1903432 GO:1904263 GO:1990253 GO:1990928
KEGG Pathways
Metabolic & Signaling
ko00970 map00970
Pfam Domains
Protein Families
Anticodon_1 tRNA-synt_1

Protein Analysis

717

Amino Acids

81.01

Weight (kDa)

4.7

Isoelectric Point (pI)

48.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Anticodon_1 PF08264 178 - 304 8.6e-13 Anticodon-binding domain of tRNA ligase
Thioredoxin_7 PF13899 526 - 590 9.2e-09 Thioredoxin-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018032)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g33690 FvH4_4g33700
rosa_chinensis RchiOBHm_Chr4g0443171
rosa_laevigata RLG00000005950
rosa_multiflora Rmu_sc0007968.1_g000006
rosa_roxburghii Rroxscaffold_5G00383770
rosa_rugosa Rorug04G0344700
rosa_samantha Rh4BG410800 Rh4CG426300 Rh4DG405900
rosa_wichuraiana Rw4G034420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 722
Acc16I TGCGCA 1 cut(s) 125
AccB7I CCANNNNNTGG 1 cut(s) 639
AccBSI CCGCTC 1 cut(s) 1346
AccI GTMKAC 1 cut(s) 2148
AccII CGCG 1 cut(s) 1369
AciI CCGC 4 cut(s) 33, 746, 1344, 2001
AclWI GGATC 4 cut(s) 771, 1315, 1893, 2028
AcoI YGGCCR 1 cut(s) 1341
AcsI RAATTY 6 cut(s) 221, 233, 434, 464, 1073, 1135
AcuI CTGAAG 5 cut(s) 117, 462, 1221, 1713, 1779
AfiI CCNNNNNNNGG 2 cut(s) 639, 1829
AflIII ACRYGT 2 cut(s) 713, 1286
AgsI TTSAA 8 cut(s) 46, 559, 626, 831, 859, 876, 1054, 1099
AhlI ACTAGT 1 cut(s) 2129
AjnI CCWGG 6 cut(s) 141, 211, 603, 1258, 1629, 1899
AjuI GAANNNNNNNTTGG 2 cut(s) 1907, 1939
Alw26I GTCTC 4 cut(s) 98, 1530, 1708, 1985
AlwI GGATC 4 cut(s) 771, 1315, 1893, 2028
AlwNI CAGNNNCTG 1 cut(s) 401
Ama87I CYCGRG 1 cut(s) 1527
AoxI GGCC 2 cut(s) 803, 1341
ApeKI GCWGC 5 cut(s) 92, 473, 571, 1102, 1964
ApoI RAATTY 6 cut(s) 221, 233, 434, 464, 1073, 1135
ArsI GACNNNNNNTTYG 3 cut(s) 515, 547, 2130
Asp700I GAANNNNTTC 2 cut(s) 188, 1922
AspLEI GCGC 2 cut(s) 126, 1369
AspS9I GGNCC 3 cut(s) 503, 564, 1436
AsuHPI GGTGA 5 cut(s) 113, 802, 1248, 1645, 1844
AvaI CYCGRG 1 cut(s) 1527
AvaII GGWCC 3 cut(s) 503, 564, 1436
BaeI ACNNNNGTAYC 2 cut(s) 634, 667
BanII GRGCYC 1 cut(s) 1084
BauI CACGAG 1 cut(s) 1739
BbsI GAAGAC 1 cut(s) 2079
BbvI GCAGC 5 cut(s) 104, 460, 583, 1089, 1976
BccI CCATC 3 cut(s) 344, 434, 1762
BciT130I CCWGG 6 cut(s) 143, 213, 605, 1260, 1631, 1901
BcoDI GTCTC 4 cut(s) 98, 1530, 1708, 1985
BcuI ACTAGT 1 cut(s) 2129
BfaI CTAG 6 cut(s) 281, 933, 1889, 2024, 2130, 2152
BfmI CTRYAG 5 cut(s) 62, 474, 1008, 1130, 1512
BglII AGATCT 2 cut(s) 82, 1204
BisI GCNGC 7 cut(s) 33, 93, 474, 572, 1103, 1344, 1965
BlsI GCNGC 7 cut(s) 34, 94, 475, 573, 1104, 1345, 1966
BmcAI AGTACT 4 cut(s) 1125, 1784, 1809, 2056
Bme1390I CCNGG 6 cut(s) 143, 213, 605, 1260, 1631, 1901
Bme18I GGWCC 3 cut(s) 503, 564, 1436
BmeT110I CYCGRG 1 cut(s) 1527
BmgT120I GGNCC 3 cut(s) 503, 564, 1436
BmiI GGNNCC 3 cut(s) 505, 1437, 1628
BmrFI CCNGG 6 cut(s) 143, 213, 605, 1260, 1631, 1901
BmsI GCATC 1 cut(s) 805
BpiI GAAGAC 1 cut(s) 2079
BplI GAGNNNNNCTC 6 cut(s) 95, 127, 123, 155, 2044, 2076
BpmI CTGGAG 5 cut(s) 778, 804, 821, 906, 1922
BpuEI CTTGAG 3 cut(s) 1068, 1780, 2052
BsaI GGTCTC 1 cut(s) 98
BsaJI CCNNGG 3 cut(s) 603, 1971, 2048
BsaWI WCCGGW 1 cut(s) 1225
Bsc4I CCNNNNNNNGG 2 cut(s) 639, 1829
Bse1I ACTGG 5 cut(s) 286, 589, 806, 1790, 1834
Bse3DI GCAATG 6 cut(s) 27, 390, 549, 678, 1649, 1845
BseBI CCWGG 6 cut(s) 143, 213, 605, 1260, 1631, 1901
BseDI CCNNGG 3 cut(s) 603, 1971, 2048
BseGI GGATG 4 cut(s) 113, 426, 709, 1505
BseLI CCNNNNNNNGG 2 cut(s) 639, 1829
BseMI GCAATG 6 cut(s) 27, 390, 549, 678, 1649, 1845
BseMII CTCAG 1 cut(s) 1698
BseNI ACTGG 5 cut(s) 286, 589, 806, 1790, 1834
BseRI GAGGAG 1 cut(s) 1802
BseXI GCAGC 5 cut(s) 104, 460, 583, 1089, 1976
BsgI GTGCAG 1 cut(s) 728
Bsh1236I CGCG 1 cut(s) 1369
BshFI GGCC 2 cut(s) 805, 1343
BsiHKCI CYCGRG 1 cut(s) 1527
BsiSI CCGG 1 cut(s) 1226
BslFI GGGAC 1 cut(s) 489
BslI CCNNNNNNNGG 2 cut(s) 639, 1829
BsmAI GTCTC 4 cut(s) 98, 1530, 1708, 1985
BsmFI GGGAC 1 cut(s) 489
BsmI GAATGC 1 cut(s) 799
BsnI GGCC 2 cut(s) 805, 1343
Bso31I GGTCTC 1 cut(s) 98
BsoBI CYCGRG 1 cut(s) 1527
Bsp1286I GDGCHC 1 cut(s) 1084
Bsp1407I TGTACA 1 cut(s) 771
Bsp143I GATC 7 cut(s) 82, 763, 1204, 1307, 1710, 1885, 2020
Bsp19I CCATGG 1 cut(s) 1971
BspACI CCGC 4 cut(s) 33, 746, 1344, 2001
BspANI GGCC 2 cut(s) 805, 1343
BspCNI CTCAG 1 cut(s) 1699
BspFNI CGCG 1 cut(s) 1369
BspLI GGNNCC 3 cut(s) 505, 1437, 1628
BspMAI CTGCAG 1 cut(s) 478
BspPI GGATC 4 cut(s) 771, 1315, 1893, 2028
BspTNI GGTCTC 1 cut(s) 98
BsrBI CCGCTC 1 cut(s) 1346
BsrDI GCAATG 6 cut(s) 27, 390, 549, 678, 1649, 1845
BsrGI TGTACA 1 cut(s) 771
BsrI ACTGG 5 cut(s) 286, 589, 806, 1790, 1834
BssECI CCNNGG 3 cut(s) 603, 1971, 2048
BssMI GATC 7 cut(s) 82, 763, 1204, 1307, 1710, 1885, 2020
BssSI CACGAG 1 cut(s) 1739
BssT1I CCWWGG 1 cut(s) 1971
Bst2BI CACGAG 1 cut(s) 1739
Bst2UI CCWGG 6 cut(s) 143, 213, 605, 1260, 1631, 1901
Bst4CI ACNGT 2 cut(s) 358, 680
Bst6I CTCTTC 5 cut(s) 438, 1283, 1421, 1577, 1935
BstAPI GCANNNNNTGC 1 cut(s) 422
BstAUI TGTACA 1 cut(s) 771
BstDEI CTNAG 6 cut(s) 685, 958, 1090, 1323, 1563, 1707
BstDSI CCRYGG 2 cut(s) 1971, 2048
BstF5I GGATG 4 cut(s) 113, 426, 709, 1505
BstFNI CGCG 1 cut(s) 1369
BstHHI GCGC 2 cut(s) 126, 1369
BstKTI GATC 7 cut(s) 85, 766, 1207, 1310, 1713, 1888, 2023
BstMAI GTCTC 4 cut(s) 98, 1530, 1708, 1985
BstMBI GATC 7 cut(s) 82, 763, 1204, 1307, 1710, 1885, 2020
BstMWI GCNNNNNNNGC 4 cut(s) 38, 422, 1697, 1964
BstNI CCWGG 6 cut(s) 143, 213, 605, 1260, 1631, 1901
BstNSI RCATGY 4 cut(s) 717, 990, 1290, 1642
BstSCI CCNGG 6 cut(s) 141, 211, 603, 1258, 1629, 1899
BstSFI CTRYAG 5 cut(s) 62, 474, 1008, 1130, 1512
BstUI CGCG 1 cut(s) 1369
BstV1I GCAGC 5 cut(s) 104, 460, 583, 1089, 1976
BstV2I GAAGAC 1 cut(s) 2079
BstX2I RGATCY 6 cut(s) 82, 763, 1204, 1307, 1885, 2020
BstYI RGATCY 6 cut(s) 82, 763, 1204, 1307, 1885, 2020
BsuRI GGCC 2 cut(s) 805, 1343
BtgI CCRYGG 2 cut(s) 1971, 2048
BtsCI GGATG 4 cut(s) 113, 426, 709, 1505
BtsI GCAGTG 1 cut(s) 119
BtsIMutI CAGTG 3 cut(s) 119, 199, 438
CaiI CAGNNNCTG 1 cut(s) 401
CfoI GCGC 2 cut(s) 126, 1369
Cfr13I GGNCC 3 cut(s) 503, 564, 1436
DdeI CTNAG 6 cut(s) 685, 958, 1090, 1323, 1563, 1707
DpnI GATC 7 cut(s) 84, 765, 1206, 1309, 1712, 1887, 2022
DpnII GATC 7 cut(s) 82, 763, 1204, 1307, 1710, 1885, 2020
EaeI YGGCCR 1 cut(s) 1341
Eam1104I CTCTTC 5 cut(s) 438, 1283, 1421, 1577, 1935
EarI CTCTTC 5 cut(s) 438, 1283, 1421, 1577, 1935
Eco130I CCWWGG 1 cut(s) 1971
Eco24I GRGCYC 1 cut(s) 1084
Eco31I GGTCTC 1 cut(s) 98
Eco32I GATATC 1 cut(s) 450
Eco47I GGWCC 3 cut(s) 503, 564, 1436
Eco57I CTGAAG 5 cut(s) 117, 462, 1221, 1713, 1779
Eco88I CYCGRG 1 cut(s) 1527
EcoRII CCWGG 6 cut(s) 141, 211, 603, 1258, 1629, 1899
EcoRV GATATC 1 cut(s) 450
EcoT14I CCWWGG 1 cut(s) 1971
EcoT38I GRGCYC 1 cut(s) 1084
ErhI CCWWGG 1 cut(s) 1971
FalI AAGNNNNNCTT 6 cut(s) 767, 799, 1149, 1181, 1556, 1588
FaqI GGGAC 1 cut(s) 489
FauNDI CATATG 1 cut(s) 1668
FblI GTMKAC 1 cut(s) 2148
Fnu4HI GCNGC 7 cut(s) 33, 93, 474, 572, 1103, 1344, 1965
FokI GGATG 4 cut(s) 100, 413, 716, 1492
FriOI GRGCYC 1 cut(s) 1084
Fsp4HI GCNGC 7 cut(s) 33, 93, 474, 572, 1103, 1344, 1965
FspBI CTAG 6 cut(s) 281, 933, 1889, 2024, 2130, 2152
FspI TGCGCA 1 cut(s) 125
GlaI GCGC 2 cut(s) 125, 1368
GluI GCNGC 7 cut(s) 33, 93, 474, 572, 1103, 1344, 1965
GsuI CTGGAG 5 cut(s) 778, 804, 821, 906, 1922
HaeIII GGCC 2 cut(s) 805, 1343
HapII CCGG 1 cut(s) 1226
HhaI GCGC 2 cut(s) 126, 1369
Hin6I GCGC 2 cut(s) 124, 1367
HinP1I GCGC 2 cut(s) 124, 1367
HincII GTYRAC 1 cut(s) 2149
HindII GTYRAC 1 cut(s) 2149
HpaII CCGG 1 cut(s) 1226
HphI GGTGA 5 cut(s) 113, 802, 1248, 1645, 1844
Hpy166II GTNNAC 3 cut(s) 737, 1636, 2149
Hpy188I TCNGA 4 cut(s) 1492, 1708, 1869, 1990
Hpy8I GTNNAC 3 cut(s) 737, 1636, 2149
HpyAV CCTTC 5 cut(s) 92, 519, 904, 1754, 1939
HpyCH4III ACNGT 2 cut(s) 358, 680
HpyCH4IV ACGT 2 cut(s) 975, 2009
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 422, 1697, 1964
HpyF3I CTNAG 6 cut(s) 685, 958, 1090, 1323, 1563, 1707
HpySE526I ACGT 2 cut(s) 975, 2009
HspAI GCGC 2 cut(s) 124, 1367
Kzo9I GATC 7 cut(s) 82, 763, 1204, 1307, 1710, 1885, 2020
LmnI GCTCC 3 cut(s) 823, 925, 1632
Lsp1109I GCAGC 5 cut(s) 104, 460, 583, 1089, 1976
LweI GCATC 1 cut(s) 805
MaeI CTAG 6 cut(s) 281, 933, 1889, 2024, 2130, 2152
MaeII ACGT 2 cut(s) 975, 2009
MaeIII GTNAC 3 cut(s) 215, 680, 1927
MalI GATC 7 cut(s) 84, 765, 1206, 1309, 1712, 1887, 2022
MbiI CCGCTC 1 cut(s) 1346
MboI GATC 7 cut(s) 82, 763, 1204, 1307, 1710, 1885, 2020
MflI RGATCY 6 cut(s) 82, 763, 1204, 1307, 1885, 2020
MhlI GDGCHC 1 cut(s) 1084
MlyI GAGTC 3 cut(s) 1438, 1787, 1994
MmeI TCCRAC 4 cut(s) 1770, 1968, 2087, 2150
MroXI GAANNNNTTC 2 cut(s) 188, 1922
MseI TTAA 7 cut(s) 866, 978, 1071, 1149, 1230, 1388, 1674
MslI CAYNNNNRTG 1 cut(s) 1869
MspA1I CMGCKG 2 cut(s) 35, 95
MspI CCGG 1 cut(s) 1226
MspR9I CCNGG 6 cut(s) 143, 213, 605, 1260, 1631, 1901
Mva1269I GAATGC 1 cut(s) 799
MvaI CCWGG 6 cut(s) 143, 213, 605, 1260, 1631, 1901
MvnI CGCG 1 cut(s) 1369
MwoI GCNNNNNNNGC 4 cut(s) 38, 422, 1697, 1964
NcoI CCATGG 1 cut(s) 1971
NdeI CATATG 1 cut(s) 1668
NdeII GATC 7 cut(s) 82, 763, 1204, 1307, 1710, 1885, 2020
NlaIV GGNNCC 3 cut(s) 505, 1437, 1628
NmuCI GTSAC 1 cut(s) 680
NsbI TGCGCA 1 cut(s) 125
NspI RCATGY 4 cut(s) 717, 990, 1290, 1642
PaeR7I CTCGAG 1 cut(s) 1527
PciI ACATGT 2 cut(s) 713, 1286
PctI GAATGC 1 cut(s) 799
PdmI GAANNNNTTC 2 cut(s) 188, 1922
PfeI GAWTC 8 cut(s) 8, 398, 485, 608, 827, 872, 1247, 1601
PflMI CCANNNNNTGG 1 cut(s) 639
PfoI TCCNGGA 1 cut(s) 141
PkrI GCNGC 7 cut(s) 34, 94, 475, 573, 1104, 1345, 1966
PleI GAGTC 3 cut(s) 1437, 1787, 1993
PpsI GAGTC 3 cut(s) 1437, 1787, 1993
PscI ACATGT 2 cut(s) 713, 1286
PsiI TTATAA 1 cut(s) 722
Psp6I CCWGG 6 cut(s) 141, 211, 603, 1258, 1629, 1899
PspGI CCWGG 6 cut(s) 141, 211, 603, 1258, 1629, 1899
PspN4I GGNNCC 3 cut(s) 505, 1437, 1628
PspPI GGNCC 3 cut(s) 503, 564, 1436
PstI CTGCAG 1 cut(s) 478
PstNI CAGNNNCTG 1 cut(s) 401
PsuI RGATCY 6 cut(s) 82, 763, 1204, 1307, 1885, 2020
PvuII CAGCTG 1 cut(s) 95
RseI CAYNNNNRTG 1 cut(s) 1869
SalI GTCGAC 1 cut(s) 2147
SaqAI TTAA 7 cut(s) 866, 978, 1071, 1149, 1230, 1388, 1674
SatI GCNGC 7 cut(s) 33, 93, 474, 572, 1103, 1344, 1965
Sau3AI GATC 7 cut(s) 82, 763, 1204, 1307, 1710, 1885, 2020
Sau96I GGNCC 3 cut(s) 503, 564, 1436
ScaI AGTACT 4 cut(s) 1125, 1784, 1809, 2056
SchI GAGTC 3 cut(s) 1438, 1787, 1994
ScrFI CCNGG 6 cut(s) 143, 213, 605, 1260, 1631, 1901
SduI GDGCHC 1 cut(s) 1084
SfaNI GCATC 1 cut(s) 805
SfcI CTRYAG 5 cut(s) 62, 474, 1008, 1130, 1512
Sfr274I CTCGAG 1 cut(s) 1527
SinI GGWCC 3 cut(s) 503, 564, 1436
SlaI CTCGAG 1 cut(s) 1527
SmiMI CAYNNNNRTG 1 cut(s) 1869
SmlI CTYRAG 4 cut(s) 1083, 1527, 1795, 2067
SmoI CTYRAG 4 cut(s) 1083, 1527, 1795, 2067
SpeI ACTAGT 1 cut(s) 2129
SsiI CCGC 4 cut(s) 33, 746, 1344, 2001
SspMI CTAG 6 cut(s) 281, 933, 1889, 2024, 2130, 2152
StyD4I CCNGG 6 cut(s) 141, 211, 603, 1258, 1629, 1899
StyI CCWWGG 1 cut(s) 1971
TaaI ACNGT 2 cut(s) 358, 680
TaiI ACGT 2 cut(s) 978, 2012
TaqI TCGA 5 cut(s) 163, 595, 1403, 1528, 2148
TaqII GACCGA 1 cut(s) 1151
TatI WGTACW 5 cut(s) 771, 1123, 1782, 1807, 2054
TauI GCSGC 2 cut(s) 35, 1346
TfiI GAWTC 8 cut(s) 8, 398, 485, 608, 827, 872, 1247, 1601
Tru1I TTAA 7 cut(s) 866, 978, 1071, 1149, 1230, 1388, 1674
Tru9I TTAA 7 cut(s) 866, 978, 1071, 1149, 1230, 1388, 1674
TscAI CASTG 3 cut(s) 126, 199, 445
TseFI GTSAC 1 cut(s) 680
TseI GCWGC 5 cut(s) 92, 473, 571, 1102, 1964
Tsp45I GTSAC 1 cut(s) 680
TspGWI ACGGA 1 cut(s) 2111
TspRI CASTG 3 cut(s) 126, 199, 445
Van91I CCANNNNNTGG 1 cut(s) 639
VpaK11BI GGWCC 3 cut(s) 503, 564, 1436
XapI RAATTY 6 cut(s) 221, 233, 434, 464, 1073, 1135
XceI RCATGY 4 cut(s) 717, 990, 1290, 1642
XcmI CCANNNNNNNNNTGG 1 cut(s) 1978
XhoI CTCGAG 1 cut(s) 1527
XmiI GTMKAC 1 cut(s) 2148
XmnI GAANNNNTTC 2 cut(s) 188, 1922
XspI CTAG 6 cut(s) 281, 933, 1889, 2024, 2130, 2152
ZrmI AGTACT 4 cut(s) 1125, 1784, 1809, 2056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.