RchiOBHm_Chr2g0105971

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0009363
Physical Location & Seq
Reverse (-)
17260943 .. 17269255
8313 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2730 bp
ATGGCGTCGAAGGCCTCGCCTTCCGCTTCCGCCAACAGATCGGAGCCTCACCAGGATCCTCCGGTGACGGGAACAGAAGAAAATGCTCTGGCCCTGAACCTAAAGGAGATTTCATTGATTATAGATTCTCTACAGAAGCAAGTTATTTCTAACCGTGGTGTCTCTATAAAGAAACGAATGGAAGAAAACAGACAGAAATTGGCTGGTGTCACTAACAATTTTTATAACTTGTCAATGGAAAGAAGAAGTAGTAGCTTATTGTATCCTGGTAAAAGTGTTGACCTATTGACGAAGAGGCAACAAGATGCATTTAAGCTGCAAAATGGTGATGAAAGTAATGGGAGCAATGATAGCTCTCAAGAAGATGGGCATGGTTCCACAGCAGTTCTTCTAGAATCTAATGTTGCTGTTAAGAATGCTGTTCGTCCTATTAAGCTTCCGGAAGTTAAAAGACTACCGCCTTATACTACATGGGTATTTTTGGACAGAAATCAAAGAATGACAGAGGATCAGTCGGTTGTGGGTCGAAGAAGAATTTATTATGATCAAAATGGAGGTGAAGCTCTTATATGTAGTGATAGTGAGGAGGAAGCAATTGACGAAGAAGAGGAAAAGAGGGAGTTTGTTGAATCTGAAGACTATATACTTCGCATGACTATTAAAGAAGCTGGTGTCTCCGATCCTGTGCTGGAGTCATTGGCACAGTATTTCTCTAGAAGCCCTGCTGAAGTCAAGGCAAGATATGAAGCTCTTATAAAAGAAGAGGAGTCTGTGGGGATTTCTAAGAATACGGATAAAGAAGACCTTTCAAAAAATGACAATTCTTTTCTTGATAAAGATCTGGATGCAGCTCTGGATTCATTTGATAACCTATTTTGTCGGCGATGCCTTGTATTTGATTGCAGATTGCATGGATGTTCGCAGGATCTTGTCTTTCCTGCTGAGAAACAAACTCCACGGAGTCCTCCAGATGATGAAAATGTACCATGTGGTCCAAATTGCTATCGATCAGTACGGAAGTCCGAAGGAATTGCTACAATAAGCTGTCCGGTGAATGATGATCTGGAAGAAAAAGATATAAAGAAATCTTCTGGTTTATCTAGAAAGAAGGGAAAGTCCTTCCAAAGTGAAAGTGCTTCATCAAATGCAAAAAACATTTCAGAAAGCAGTGATTCAGATAATGAAACCAGGCAGGATGATACTTGTAGCCATGATCCAATATCTTCAAAGACTAAGGTAGCAGGGAAAAGTGGAATCCCTAAGAGGAACAGCAAGAGAGTTGCAGAGCGTGTTCTGGTGTGTATGCAGAAGAGGCAGAAGAAAACAATGGCTTCTGATTCTGATTCAATAGTTGATGGTGGTCTTTGTGCAAGTGATATGAAGCTTAGATCTAATTCATGCAAAGATAATGAAGACACTAGTTCTTCTTCGCAAAAGAATCTGAAATCTTCTTCCAGTGGAAGGTCCAGGAGGGAATCACCTCTGAAGGACAGTAACAAAGTAGTTCAGGGTGAAGTTCTTGATGGCTCATCAAATGAGATGATCACTGATCCACCTGCCACTAGTAGTGATGACAATTTGAGGAAAGAAGAGTATGTAGATGAAAACATATACAAACAAGAATGCAGTGATGACAAAACTTGGAAAACTATTGAAACGAGTCTTTTCGAGAAAGGCATAGAGATATTTGGCAAGAACAGCTGTTTAATAGCAAGGAACCTGCTAAACGGTATGAAAACTTGTTGGGAGGTCTTTCAGTATATGAATTACTCAGACAGTAAGATTTCCTGCCAAGCGGGTGATGCTGCGAACTCCCTTGTTGAAGGGTATTCCAAGGGTAATAATGAAGCAAGAAGAAGATCAAGATTTTTACGTAGGAAAGGTAGAGTTCGTCGCTTGAAGTATACTTGGAAGTCTGCTGCTTACCATTCAATCAGGAAACGAATTACTGAGAAAAAAGATCAACCATGCAGGCAGTATAATCCATGTACTTGCCAAACAGCTTGTGGAAAGCAGTGTAGTTGTCTTCTAAATGGGACATGTTGTGAGAAGTACTGTGGGTGTCCTAAGAGTTGCAAGAATAGATTTAGAGGCTGCCATTGTGCTAAAAGTCAATGCCGAAGTCGTCAATGCCCATGCTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGCTGGGTTAGTTGTGGTGATGGTAGTCTTGGGGTTCCAAACCAAAGAGGTGATAATTATGAGTGTAGAAATATGAAGCTTCTTCTGAAACAACAACAAAGGGTCTTACTTGGAAGATCTGATGTTTCTGGCTGGGGTGCTTTCTTAAAGAATAGCGTCAGCAAGCATGAATACCTTGGTGAGTATACTGGGGAGTTGATCTCACACCGCGAAGCAGATAAGCGTGGAAAAATATACGACCGGGAAAATTCATCATTTCTCTTCAATCTGAATGATCAGTTTGTTCTTGATGCCTATCGGAAGGGTGATAAATTGAAGTTCGCCAACCACTCTCCAGATCCAAATTGCTACGCGAAGGTCATTATGGTTGCTGGAGATCACAGGGTGGGTATATTTGCCAAGGAACGAATTGCTTCGGGAGAAGAACTTTTCTATGATTACCGTTATGAGCCAGATAGAGCTCCTGCTTGGGCTCGGAAGCCTGAGGCATCCGGGTCAAAAAGGGACGATGGTGCCCCCTCAAGTGGTCGCGCAAAGAAGCTTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003700 GO:0003723 GO:0003727 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006139 GO:0006325 GO:0006342 GO:0006349 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009292 GO:0009294 GO:0009653 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009965 GO:0009987 GO:0010016 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016278 GO:0016279 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0017053 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031519 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0040030 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044764 GO:0045814 GO:0045857 GO:0045892 GO:0045934 GO:0046483 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048586 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0070013 GO:0070734 GO:0071514 GO:0071704 GO:0071840 GO:0080090 GO:0090568 GO:0097159 GO:0099402 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00310 ko05206 map00310 map05206
Pfam Domains
Protein Families
SET

Protein Analysis

909

Amino Acids

101.97

Weight (kDa)

8.39

Isoelectric Point (pI)

56.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HTH_CLF_N PF25996 208 - 251 6.3e-20 Histone-lysine N-methyltransferase CLF, N-terminal HTH domain
preSET_CXC PF18264 698 - 729 8.6e-08 CXC domain
SET PF00856 771 - 874 2.7e-19 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 225, 755
AarI CACCTGC 1 cut(s) 1564
Acc36I ACCTGC 2 cut(s) 1564, 1728
AccB1I GGYRCC 1 cut(s) 2693
AccI GTMKAC 2 cut(s) 1904, 2366
AccII CGCG 3 cut(s) 2391, 2534, 2712
AccIII TCCGGA 1 cut(s) 439
AciI CCGC 5 cut(s) 24, 30, 458, 1796, 2389
AclWI GGATC 9 cut(s) 50, 63, 516, 674, 933, 1208, 1544, 2156, 2513
AcsI RAATTY 2 cut(s) 534, 2428
AcuI CTGAAG 3 cut(s) 654, 747, 1505
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 2566
AfaI GTAC 4 cut(s) 984, 1014, 1990, 2054
AfiI CCNNNNNNNGG 3 cut(s) 68, 1461, 2705
AflIII ACRYGT 1 cut(s) 2039
AhlI ACTAGT 2 cut(s) 1418, 1562
AjnI CCWGG 4 cut(s) 51, 265, 1187, 1466
Alw21I GWGCWC 1 cut(s) 2644
Alw26I GTCTC 2 cut(s) 166, 679
AlwI GGATC 9 cut(s) 50, 63, 516, 674, 933, 1208, 1544, 2156, 2513
Aor13HI TCCGGA 1 cut(s) 439
AoxI GGCC 2 cut(s) 12, 90
ApeKI GCWGC 6 cut(s) 316, 848, 1805, 1919, 2094, 2144
ApoI RAATTY 2 cut(s) 534, 2428
Asp700I GAANNNNTTC 1 cut(s) 2593
AspLEI GCGC 1 cut(s) 2714
AspS9I GGNCC 3 cut(s) 91, 992, 1464
AsuC2I CCSGG 2 cut(s) 2423, 2674
AvaII GGWCC 2 cut(s) 992, 1464
AxyI CCTNAGG 1 cut(s) 2664
BaeGI GKGCMC 1 cut(s) 2698
BamHI GGATCC 1 cut(s) 55
BanI GGYRCC 1 cut(s) 2693
BanII GRGCYC 2 cut(s) 2644, 2656
BarI GAAGNNNNNNTAC 2 cut(s) 627, 659
BbsI GAAGAC 4 cut(s) 642, 807, 1419, 2018
Bbv12I GWGCWC 1 cut(s) 2644
BbvI GCAGC 6 cut(s) 303, 860, 1792, 1906, 2081, 2131
BccI CCATC 5 cut(s) 359, 1349, 1517, 2195, 2684
BcgI CGANNNNNNTGC 2 cut(s) 1013, 1047
BciT130I CCWGG 4 cut(s) 53, 267, 1189, 1468
BciVI GTATCC 1 cut(s) 273
BclI TGATCA 3 cut(s) 544, 1542, 2455
BcnI CCSGG 2 cut(s) 2423, 2674
BcoDI GTCTC 2 cut(s) 166, 679
BcuI ACTAGT 2 cut(s) 1418, 1562
BfaI CTAG 5 cut(s) 392, 714, 1101, 1419, 1563
BfmI CTRYAG 2 cut(s) 131, 2145
BfuAI ACCTGC 2 cut(s) 1564, 1728
BfuI GTATCC 1 cut(s) 273
BglII AGATCT 3 cut(s) 838, 1388, 2297
BisI GCNGC 6 cut(s) 317, 849, 1806, 1920, 2095, 2145
BlsI GCNGC 6 cut(s) 318, 850, 1807, 1921, 2096, 2146
BmcAI AGTACT 1 cut(s) 2054
Bme1390I CCNGG 6 cut(s) 53, 267, 1189, 1468, 2423, 2674
Bme18I GGWCC 2 cut(s) 992, 1464
BmgT120I GGNCC 3 cut(s) 91, 992, 1464
BmiI GGNNCC 6 cut(s) 45, 57, 376, 1718, 2217, 2695
BmrFI CCNGG 6 cut(s) 53, 267, 1189, 1468, 2423, 2674
BmrI ACTGGG 1 cut(s) 2379
BmsI GCATC 6 cut(s) 295, 835, 875, 1792, 2461, 2678
BmuI ACTGGG 1 cut(s) 2379
BpiI GAAGAC 4 cut(s) 642, 807, 1419, 2018
BplI GAGNNNNNCTC 2 cut(s) 2366, 2398
BpmI CTGGAG 4 cut(s) 710, 951, 2499, 2574
BpuEI CTTGAG 2 cut(s) 342, 2686
BpuMI CCSGG 2 cut(s) 2423, 2674
Bsa29I ATCGAT 1 cut(s) 1006
BsaAI YACGTR 1 cut(s) 1874
BsaBI GATNNNNATC 2 cut(s) 837, 2475
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 5 cut(s) 154, 956, 1833, 2356, 2580
BsaWI WCCGGW 3 cut(s) 61, 439, 1048
Bsc4I CCNNNNNNNGG 3 cut(s) 68, 1461, 2705
Bse1I ACTGG 2 cut(s) 1455, 2374
Bse21I CCTNAGG 1 cut(s) 2664
Bse3DI GCAATG 1 cut(s) 352
Bse8I GATNNNNATC 2 cut(s) 837, 2475
BseAI TCCGGA 1 cut(s) 439
BseBI CCWGG 4 cut(s) 53, 267, 1189, 1468
BseCI ATCGAT 1 cut(s) 1006
BseDI CCNNGG 5 cut(s) 154, 956, 1833, 2356, 2580
BseGI GGATG 4 cut(s) 850, 920, 1201, 2669
BseJI GATNNNNATC 2 cut(s) 837, 2475
BseLI CCNNNNNNNGG 3 cut(s) 68, 1461, 2705
BseMI GCAATG 1 cut(s) 352
BseMII CTCAG 4 cut(s) 933, 1785, 1941, 2655
BseNI ACTGG 2 cut(s) 1455, 2374
BseRI GAGGAG 2 cut(s) 599, 779
BseSI GKGCMC 1 cut(s) 2698
BseXI GCAGC 6 cut(s) 303, 860, 1792, 1906, 2081, 2131
BseYI CCCAGC 2 cut(s) 2184, 2313
Bsh1236I CGCG 3 cut(s) 2391, 2534, 2712
Bsh1285I CGRYCG 1 cut(s) 2422
BshFI GGCC 2 cut(s) 14, 92
BshNI GGYRCC 1 cut(s) 2693
BshVI ATCGAT 1 cut(s) 1006
BsiEI CGRYCG 1 cut(s) 2422
BsiHKAI GWGCWC 1 cut(s) 2644
BsiSI CCGG 5 cut(s) 62, 440, 1049, 2422, 2673
BslFI GGGAC 2 cut(s) 2050, 2699
BslI CCNNNNNNNGG 3 cut(s) 68, 1461, 2705
BsmAI GTCTC 2 cut(s) 166, 679
BsmFI GGGAC 2 cut(s) 2050, 2699
BsmI GAATGC 2 cut(s) 421, 1628
BsnI GGCC 2 cut(s) 14, 92
Bsp1286I GDGCHC 3 cut(s) 2644, 2656, 2698
Bsp13I TCCGGA 1 cut(s) 439
BspACI CCGC 5 cut(s) 24, 30, 458, 1796, 2389
BspANI GGCC 2 cut(s) 14, 92
BspCNI CTCAG 4 cut(s) 934, 1784, 1942, 2656
BspDI ATCGAT 1 cut(s) 1006
BspEI TCCGGA 1 cut(s) 439
BspFNI CGCG 3 cut(s) 2391, 2534, 2712
BspLI GGNNCC 6 cut(s) 45, 57, 376, 1718, 2217, 2695
BspMAI CTGCAG 1 cut(s) 2149
BspMI ACCTGC 2 cut(s) 1564, 1728
BspPI GGATC 9 cut(s) 50, 63, 516, 674, 933, 1208, 1544, 2156, 2513
BspT107I GGYRCC 1 cut(s) 2693
BsrDI GCAATG 1 cut(s) 352
BsrI ACTGG 2 cut(s) 1455, 2374
BssECI CCNNGG 5 cut(s) 154, 956, 1833, 2356, 2580
BssNAI GTATAC 2 cut(s) 1905, 2367
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 3 cut(s) 1833, 2356, 2580
Bst1107I GTATAC 2 cut(s) 1905, 2367
Bst2UI CCWGG 4 cut(s) 53, 267, 1189, 1468
Bst4CI ACNGT 7 cut(s) 155, 705, 1493, 1730, 1778, 2057, 2624
Bst6I CTCTTC 6 cut(s) 287, 600, 756, 1304, 1584, 2447
BstACI GRCGYC 1 cut(s) 5
BstBAI YACGTR 1 cut(s) 1874
BstC8I GCNNGC 3 cut(s) 1973, 2345, 2724
BstDEI CTNAG 9 cut(s) 783, 942, 1233, 1260, 1385, 1771, 1950, 2067, 2664
BstDSI CCRYGG 2 cut(s) 154, 956
BstF5I GGATG 4 cut(s) 850, 920, 1201, 2669
BstFNI CGCG 3 cut(s) 2391, 2534, 2712
BstHHI GCGC 1 cut(s) 2714
BstMAI GTCTC 2 cut(s) 166, 679
BstMCI CGRYCG 1 cut(s) 2422
BstMWI GCNNNNNNNGC 5 cut(s) 11, 351, 1312, 1698, 1802
BstNI CCWGG 4 cut(s) 53, 267, 1189, 1468
BstNSI RCATGY 1 cut(s) 2043
BstSCI CCNGG 6 cut(s) 51, 265, 1187, 1466, 2421, 2672
BstSFI CTRYAG 2 cut(s) 131, 2145
BstSLI GKGCMC 1 cut(s) 2698
BstSNI TACGTA 1 cut(s) 1874
BstUI CGCG 3 cut(s) 2391, 2534, 2712
BstV1I GCAGC 6 cut(s) 303, 860, 1792, 1906, 2081, 2131
BstV2I GAAGAC 4 cut(s) 642, 807, 1419, 2018
BstX2I RGATCY 6 cut(s) 55, 838, 925, 1388, 2297, 2518
BstYI RGATCY 6 cut(s) 55, 838, 925, 1388, 2297, 2518
BstZ17I GTATAC 2 cut(s) 1905, 2367
Bsu15I ATCGAT 1 cut(s) 1006
Bsu36I CCTNAGG 1 cut(s) 2664
BsuI GTATCC 1 cut(s) 273
BsuRI GGCC 2 cut(s) 14, 92
BsuTUI ATCGAT 1 cut(s) 1006
BtgI CCRYGG 2 cut(s) 154, 956
BtgZI GCGATG 1 cut(s) 898
BtsCI GGATG 4 cut(s) 850, 920, 1201, 2669
BtsI GCAGTG 3 cut(s) 1174, 1633, 2021
BtsIMutI CAGTG 5 cut(s) 1174, 1462, 1545, 1633, 2021
BveI ACCTGC 2 cut(s) 1564, 1728
Cac8I GCNNGC 3 cut(s) 1973, 2345, 2724
CfoI GCGC 1 cut(s) 2714
Cfr13I GGNCC 3 cut(s) 91, 992, 1464
ClaI ATCGAT 1 cut(s) 1006
CseI GACGC 1 cut(s) 2326
Csp6I GTAC 4 cut(s) 983, 1013, 1989, 2053
CviQI GTAC 4 cut(s) 983, 1013, 1989, 2053
DdeI CTNAG 9 cut(s) 783, 942, 1233, 1260, 1385, 1771, 1950, 2067, 2664
DraIII CACNNNGTG 1 cut(s) 2566
Eam1104I CTCTTC 6 cut(s) 287, 600, 756, 1304, 1584, 2447
EarI CTCTTC 6 cut(s) 287, 600, 756, 1304, 1584, 2447
EciI GGCGGA 1 cut(s) 19
Ecl136II GAGCTC 1 cut(s) 2642
Eco105I TACGTA 1 cut(s) 1874
Eco130I CCWWGG 3 cut(s) 1833, 2356, 2580
Eco147I AGGCCT 1 cut(s) 14
Eco24I GRGCYC 2 cut(s) 2644, 2656
Eco47I GGWCC 2 cut(s) 992, 1464
Eco53kI GAGCTC 1 cut(s) 2642
Eco57I CTGAAG 3 cut(s) 654, 747, 1505
Eco81I CCTNAGG 1 cut(s) 2664
EcoICRI GAGCTC 1 cut(s) 2642
EcoRII CCWGG 4 cut(s) 51, 265, 1187, 1466
EcoT14I CCWWGG 3 cut(s) 1833, 2356, 2580
EcoT22I ATGCAT 1 cut(s) 310
EcoT38I GRGCYC 2 cut(s) 2644, 2656
ErhI CCWWGG 3 cut(s) 1833, 2356, 2580
FalI AAGNNNNNCTT 2 cut(s) 789, 821
FaqI GGGAC 2 cut(s) 2050, 2699
FauI CCCGC 1 cut(s) 1789
FbaI TGATCA 3 cut(s) 544, 1542, 2455
FblI GTMKAC 2 cut(s) 1904, 2366
Fnu4HI GCNGC 6 cut(s) 317, 849, 1806, 1920, 2095, 2145
FokI GGATG 4 cut(s) 857, 927, 1208, 2656
FriOI GRGCYC 2 cut(s) 2644, 2656
Fsp4HI GCNGC 6 cut(s) 317, 849, 1806, 1920, 2095, 2145
FspBI CTAG 5 cut(s) 392, 714, 1101, 1419, 1563
GlaI GCGC 1 cut(s) 2713
GluI GCNGC 6 cut(s) 317, 849, 1806, 1920, 2095, 2145
GsaI CCCAGC 2 cut(s) 2188, 2317
GsuI CTGGAG 4 cut(s) 710, 951, 2499, 2574
HaeIII GGCC 2 cut(s) 14, 92
HapII CCGG 5 cut(s) 62, 440, 1049, 2422, 2673
HgaI GACGC 1 cut(s) 2326
HhaI GCGC 1 cut(s) 2714
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 1 cut(s) 2712
HinP1I GCGC 1 cut(s) 2712
HincII GTYRAC 1 cut(s) 280
HindII GTYRAC 1 cut(s) 280
HindIII AAGCTT 4 cut(s) 434, 1382, 2258, 2720
HpaII CCGG 5 cut(s) 62, 440, 1049, 2422, 2673
Hpy166II GTNNAC 3 cut(s) 280, 1905, 2367
Hpy8I GTNNAC 3 cut(s) 280, 1905, 2367
Hpy99I CGWCG 2 cut(s) 10, 1896
HpyCH4III ACNGT 7 cut(s) 155, 705, 1493, 1730, 1778, 2057, 2624
HpyCH4IV ACGT 1 cut(s) 1873
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 351, 1312, 1698, 1802
HpyF3I CTNAG 9 cut(s) 783, 942, 1233, 1260, 1385, 1771, 1950, 2067, 2664
HpySE526I ACGT 1 cut(s) 1873
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 1 cut(s) 2712
Kpn2I TCCGGA 1 cut(s) 439
Ksp22I TGATCA 3 cut(s) 544, 1542, 2455
LmnI GCTCC 3 cut(s) 43, 342, 2647
Lsp1109I GCAGC 6 cut(s) 303, 860, 1792, 1906, 2081, 2131
LweI GCATC 6 cut(s) 295, 835, 875, 1792, 2461, 2678
MaeI CTAG 5 cut(s) 392, 714, 1101, 1419, 1563
MaeII ACGT 1 cut(s) 1873
MaeIII GTNAC 3 cut(s) 64, 208, 1493
MfeI CAATTG 1 cut(s) 594
MflI RGATCY 6 cut(s) 55, 838, 925, 1388, 2297, 2518
MhlI GDGCHC 3 cut(s) 2644, 2656, 2698
MlyI GAGTC 4 cut(s) 701, 776, 970, 1669
Mph1103I ATGCAT 1 cut(s) 310
MroI TCCGGA 1 cut(s) 439
MroXI GAANNNNTTC 1 cut(s) 2593
MseI TTAA 8 cut(s) 312, 411, 432, 447, 660, 1706, 2327, 2728
MspA1I CMGCKG 1 cut(s) 1701
MspI CCGG 5 cut(s) 62, 440, 1049, 2422, 2673
MspR9I CCNGG 6 cut(s) 53, 267, 1189, 1468, 2423, 2674
MunI CAATTG 1 cut(s) 594
Mva1269I GAATGC 2 cut(s) 421, 1628
MvaI CCWGG 4 cut(s) 53, 267, 1189, 1468
MvnI CGCG 3 cut(s) 2391, 2534, 2712
MwoI GCNNNNNNNGC 5 cut(s) 11, 351, 1312, 1698, 1802
NciI CCSGG 2 cut(s) 2423, 2674
NlaIV GGNNCC 6 cut(s) 45, 57, 376, 1718, 2217, 2695
NmuCI GTSAC 2 cut(s) 64, 208
NsiI ATGCAT 1 cut(s) 310
NspI RCATGY 1 cut(s) 2043
PaqCI CACCTGC 1 cut(s) 1564
PceI AGGCCT 1 cut(s) 14
PciI ACATGT 1 cut(s) 2039
PctI GAATGC 2 cut(s) 421, 1628
PdmI GAANNNNTTC 1 cut(s) 2593
PfoI TCCNGGA 1 cut(s) 1466
PkrI GCNGC 6 cut(s) 318, 850, 1807, 1921, 2096, 2146
PleI GAGTC 4 cut(s) 700, 775, 969, 1668
PpsI GAGTC 4 cut(s) 700, 775, 969, 1668
Ppu21I YACGTR 1 cut(s) 1874
PscI ACATGT 1 cut(s) 2039
PsiI TTATAA 2 cut(s) 225, 755
Psp124BI GAGCTC 1 cut(s) 2644
Psp6I CCWGG 4 cut(s) 51, 265, 1187, 1466
PspFI CCCAGC 2 cut(s) 2184, 2313
PspGI CCWGG 4 cut(s) 51, 265, 1187, 1466
PspN4I GGNNCC 6 cut(s) 45, 57, 376, 1718, 2217, 2695
PspPI GGNCC 3 cut(s) 91, 992, 1464
PstI CTGCAG 1 cut(s) 2149
PsuI RGATCY 6 cut(s) 55, 838, 925, 1388, 2297, 2518
PvuII CAGCTG 1 cut(s) 1701
RsaI GTAC 4 cut(s) 984, 1014, 1990, 2054
RsaNI GTAC 4 cut(s) 983, 1013, 1989, 2053
SacI GAGCTC 1 cut(s) 2644
SaqAI TTAA 8 cut(s) 312, 411, 432, 447, 660, 1706, 2327, 2728
SatI GCNGC 6 cut(s) 317, 849, 1806, 1920, 2095, 2145
Sau96I GGNCC 3 cut(s) 91, 992, 1464
ScaI AGTACT 1 cut(s) 2054
SchI GAGTC 4 cut(s) 701, 776, 970, 1669
ScrFI CCNGG 6 cut(s) 53, 267, 1189, 1468, 2423, 2674
SduI GDGCHC 3 cut(s) 2644, 2656, 2698
SfaNI GCATC 6 cut(s) 295, 835, 875, 1792, 2461, 2678
SfcI CTRYAG 2 cut(s) 131, 2145
SinI GGWCC 2 cut(s) 992, 1464
SmlI CTYRAG 2 cut(s) 357, 2701
SmoI CTYRAG 2 cut(s) 357, 2701
SnaBI TACGTA 1 cut(s) 1874
SpeI ACTAGT 2 cut(s) 1418, 1562
SseBI AGGCCT 1 cut(s) 14
SsiI CCGC 5 cut(s) 24, 30, 458, 1796, 2389
SspMI CTAG 5 cut(s) 392, 714, 1101, 1419, 1563
SstI GAGCTC 1 cut(s) 2644
StuI AGGCCT 1 cut(s) 14
StyD4I CCNGG 6 cut(s) 51, 265, 1187, 1466, 2421, 2672
StyI CCWWGG 3 cut(s) 1833, 2356, 2580
TaaI ACNGT 7 cut(s) 155, 705, 1493, 1730, 1778, 2057, 2624
TaiI ACGT 1 cut(s) 1876
TaqI TCGA 4 cut(s) 8, 526, 1006, 1668
TatI WGTACW 2 cut(s) 1988, 2052
Tru1I TTAA 8 cut(s) 312, 411, 432, 447, 660, 1706, 2327, 2728
Tru9I TTAA 8 cut(s) 312, 411, 432, 447, 660, 1706, 2327, 2728
TscAI CASTG 5 cut(s) 1174, 1462, 1552, 1633, 2021
TseFI GTSAC 2 cut(s) 64, 208
TseI GCWGC 6 cut(s) 316, 848, 1805, 1919, 2094, 2144
Tsp45I GTSAC 2 cut(s) 64, 208
TspGWI ACGGA 3 cut(s) 806, 973, 1030
TspRI CASTG 5 cut(s) 1174, 1462, 1552, 1633, 2021
VpaK11BI GGWCC 2 cut(s) 992, 1464
XapI RAATTY 2 cut(s) 534, 2428
XbaI TCTAGA 3 cut(s) 391, 713, 1100
XceI RCATGY 1 cut(s) 2043
XcmI CCANNNNNNNNNTGG 1 cut(s) 2003
XmiI GTMKAC 2 cut(s) 1904, 2366
XmnI GAANNNNTTC 1 cut(s) 2593
XspI CTAG 5 cut(s) 392, 714, 1101, 1419, 1563
ZrmI AGTACT 1 cut(s) 2054
Zsp2I ATGCAT 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.