AT-hook motif nuclear-localized protein
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom01g19740 |
| rosa_chinensis | RchiOBHm_Chr2g0111991 |
| rosa_roxburghii | Rroxscaffold_5G00349060 |
| rosa_samantha | Rh3BG144600 Rh3CG146000 Rh3DG145800 Rh5AG181200 Rh6AG351100 Rh7BG241500 |
| rosa_wichuraiana | Rw3G020720 Rw5G016440 Rw6G014630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 157 |
| AcsI | RAATTY | 2 cut(s) | 64, 100 |
| AcuI | CTGAAG | 1 cut(s) | 220 |
| AfaI | GTAC | 2 cut(s) | 143, 220 |
| AgsI | TTSAA | 3 cut(s) | 63, 105, 148 |
| Alw26I | GTCTC | 1 cut(s) | 205 |
| AoxI | GGCC | 1 cut(s) | 157 |
| ApoI | RAATTY | 2 cut(s) | 64, 100 |
| BalI | TGGCCA | 1 cut(s) | 159 |
| BclI | TGATCA | 1 cut(s) | 184 |
| BcoDI | GTCTC | 1 cut(s) | 205 |
| BfaI | CTAG | 1 cut(s) | 253 |
| BmcAI | AGTACT | 1 cut(s) | 143 |
| BmsI | GCATC | 2 cut(s) | 72, 94 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 104, 136 |
| BsaI | GGTCTC | 1 cut(s) | 205 |
| BsaJI | CCNNGG | 1 cut(s) | 195 |
| BseDI | CCNNGG | 1 cut(s) | 195 |
| BseMII | CTCAG | 1 cut(s) | 62 |
| BshFI | GGCC | 1 cut(s) | 159 |
| BsmAI | GTCTC | 1 cut(s) | 205 |
| BsnI | GGCC | 1 cut(s) | 159 |
| Bso31I | GGTCTC | 1 cut(s) | 205 |
| Bsp143I | GATC | 1 cut(s) | 184 |
| BspANI | GGCC | 1 cut(s) | 159 |
| BspCNI | CTCAG | 1 cut(s) | 63 |
| BspHI | TCATGA | 2 cut(s) | 30, 187 |
| BspTNI | GGTCTC | 1 cut(s) | 205 |
| BssECI | CCNNGG | 1 cut(s) | 195 |
| BssMI | GATC | 1 cut(s) | 184 |
| Bst4CI | ACNGT | 1 cut(s) | 199 |
| Bst6I | CTCTTC | 1 cut(s) | 132 |
| BstDEI | CTNAG | 1 cut(s) | 71 |
| BstDSI | CCRYGG | 1 cut(s) | 195 |
| BstKTI | GATC | 1 cut(s) | 187 |
| BstMAI | GTCTC | 1 cut(s) | 205 |
| BstMBI | GATC | 1 cut(s) | 184 |
| BsuRI | GGCC | 1 cut(s) | 159 |
| BtgI | CCRYGG | 1 cut(s) | 195 |
| CciI | TCATGA | 2 cut(s) | 30, 187 |
| Csp6I | GTAC | 2 cut(s) | 142, 219 |
| CviAII | CATG | 2 cut(s) | 31, 188 |
| CviJI | RGCY | 4 cut(s) | 9, 75, 153, 159 |
| CviKI_1 | RGCY | 4 cut(s) | 9, 75, 153, 159 |
| CviQI | GTAC | 2 cut(s) | 142, 219 |
| DdeI | CTNAG | 1 cut(s) | 71 |
| DpnI | GATC | 1 cut(s) | 186 |
| DpnII | GATC | 1 cut(s) | 184 |
| DraI | TTTAAA | 1 cut(s) | 97 |
| EaeI | YGGCCR | 1 cut(s) | 157 |
| Eam1104I | CTCTTC | 1 cut(s) | 132 |
| EarI | CTCTTC | 1 cut(s) | 132 |
| Eco31I | GGTCTC | 1 cut(s) | 205 |
| Eco57I | CTGAAG | 1 cut(s) | 220 |
| EcoT22I | ATGCAT | 1 cut(s) | 87 |
| FaeI | CATG | 2 cut(s) | 34, 191 |
| FaiI | YATR | 2 cut(s) | 32, 189 |
| FatI | CATG | 2 cut(s) | 30, 187 |
| FbaI | TGATCA | 1 cut(s) | 184 |
| FspBI | CTAG | 1 cut(s) | 253 |
| HaeIII | GGCC | 1 cut(s) | 159 |
| Hin1II | CATG | 2 cut(s) | 34, 191 |
| HinfI | GANTC | 1 cut(s) | 191 |
| Hpy188I | TCNGA | 3 cut(s) | 72, 90, 239 |
| Hpy188III | TCNNGA | 2 cut(s) | 31, 188 |
| HpyAV | CCTTC | 1 cut(s) | 37 |
| HpyCH4III | ACNGT | 1 cut(s) | 199 |
| HpyCH4V | TGCA | 1 cut(s) | 85 |
| HpyF3I | CTNAG | 1 cut(s) | 71 |
| Hsp92II | CATG | 2 cut(s) | 34, 191 |
| Ksp22I | TGATCA | 1 cut(s) | 184 |
| Kzo9I | GATC | 1 cut(s) | 184 |
| LpnPI | CCDG | 2 cut(s) | 92, 141 |
| LweI | GCATC | 2 cut(s) | 72, 94 |
| MaeI | CTAG | 1 cut(s) | 253 |
| MaeIII | GTNAC | 2 cut(s) | 116, 245 |
| MalI | GATC | 1 cut(s) | 186 |
| MboI | GATC | 1 cut(s) | 184 |
| MboII | GAAGA | 3 cut(s) | 146, 149, 226 |
| MlsI | TGGCCA | 1 cut(s) | 159 |
| MluCI | AATT | 4 cut(s) | 58, 64, 100, 166 |
| MluNI | TGGCCA | 1 cut(s) | 159 |
| Mox20I | TGGCCA | 1 cut(s) | 159 |
| Mph1103I | ATGCAT | 1 cut(s) | 87 |
| MscI | TGGCCA | 1 cut(s) | 159 |
| MseI | TTAA | 2 cut(s) | 20, 96 |
| Msp20I | TGGCCA | 1 cut(s) | 159 |
| NdeII | GATC | 1 cut(s) | 184 |
| NlaIII | CATG | 2 cut(s) | 34, 191 |
| NmuCI | GTSAC | 1 cut(s) | 245 |
| NsiI | ATGCAT | 1 cut(s) | 87 |
| PagI | TCATGA | 2 cut(s) | 30, 187 |
| PfeI | GAWTC | 1 cut(s) | 191 |
| RsaI | GTAC | 2 cut(s) | 143, 220 |
| RsaNI | GTAC | 2 cut(s) | 142, 219 |
| SaqAI | TTAA | 2 cut(s) | 20, 96 |
| Sau3AI | GATC | 1 cut(s) | 184 |
| ScaI | AGTACT | 1 cut(s) | 143 |
| SetI | ASST | 1 cut(s) | 81 |
| SfaNI | GCATC | 2 cut(s) | 72, 94 |
| SgeI | CNNG | 7 cut(s) | 43, 91, 168, 200, 208, 217, 234 |
| Sse9I | AATT | 4 cut(s) | 58, 64, 100, 166 |
| SspMI | CTAG | 1 cut(s) | 253 |
| TaaI | ACNGT | 1 cut(s) | 199 |
| TasI | AATT | 4 cut(s) | 58, 64, 100, 166 |
| TatI | WGTACW | 1 cut(s) | 141 |
| TfiI | GAWTC | 1 cut(s) | 191 |
| Tru1I | TTAA | 2 cut(s) | 20, 96 |
| Tru9I | TTAA | 2 cut(s) | 20, 96 |
| TseFI | GTSAC | 1 cut(s) | 245 |
| Tsp45I | GTSAC | 1 cut(s) | 245 |
| TspDTI | ATGAA | 2 cut(s) | 17, 19 |
| XapI | RAATTY | 2 cut(s) | 64, 100 |
| XspI | CTAG | 1 cut(s) | 253 |
| ZrmI | AGTACT | 1 cut(s) | 143 |
| Zsp2I | ATGCAT | 1 cut(s) | 87 |