RchiOBHm_Chr2g0132931

ABC transporter C family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0002799
Physical Location & Seq
Forward (+)
49492132 .. 49513896
21765 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 4323 bp
ATGGACTTTCCAACTTTTGGTCCTAATATAGTCACTCTTGCTGTGATTTTCGTACTCGGAATCACTCCAAGGACCGGCAGAAGAACCTGGAGGATGAACTTTTCCGAGAGGTTTTTCTTGCACGTGCTTCCTGCCGTCGGAGCTTGTTCAGCATTTTTCGACATTGCTTTACTTTTAAAGAAAGGTCGTGGTGGTGTCTTGGTTGCAAAACATGAATGGTTGTTCAGATGTTCCCAGTTTGCTGTCTGGACAGTTGTCATACTCTTCTCAAGGTGTTTCAATGCTTGCCATATTTTTGGCAATCGCATCTTGTGTTTCTGGTGGCTTGTAAAAATACTTTTGGCAACACTTCATTTGTTCACAACATATCCTTCATTCAAGGTCTTGTTATCTCTTAAGGAGATTGGTACTGTTTCATTGGACGTCGTTTTTGGTATATCAATTAACATCATCAGAATGAAGAGGGCATCATCCAACAGAAGTTCAATGGAAGATTCACTACTTTCTGCTGACATGGACCTCGAGGAAGGTTCTCTCAAGGACTCTGGCGACAATCAGAGCTATTTCAATCTTATGACATTCAGATCGATCACTTCTGTGATGAGTCATGGTGTCACAAAGCAGCTTGAATTTGAAGATTTGCTTCAACTTCCCACTGATATGGACCCTTGTTCCTGTCATGATGCATTATTTAGCTGTTGGAAATCCCAACAGAGTAGTTGCCCTGATCCATCCCTGTTTAGGGCAATCTGTTCTGCATATGGATGGCCATACGTTCGTCTCGGCTTGTTAAAGGTACTTAATGATTCTGTTGGTTTTGCTGGACCGTTGCTTCTCAATAAGCTAATTCGCTTCCTTCAACAAGGTTCGCAGAATTTGGATGGCTATGTTCTTGCTGTATCCTTGGGCCTCATATCTATCTTTAAATCGTTTTTGGATACACAATATACTTTTCATCTTTCAAAATTGAAGTTAAAGCTACGATCTAGTATCATGACAGTTATATATCAGAAGTGCCTCTGTGTCAACCTAGCAGAGCGATCAAAGTTTACCGAGGGGGAAATTCAGACATTCATGGCCATAGACTCTGATCGCATTGTCAACTTAAGTAACACTCTCCATGATATGTGGAGCTTGCCTTTACAAATTGGGGTGGCTTTGTTCCTTTTGTATACACAAGTCAAATTTGCATTTGTTTCTGGGCTTGCAATTACCATCGCATTAATACCAGTGAATAAATGGATATCTACATTGATTGCAAGAGCTACAGTGAAAATGATGAAGCAGAAGGATGAGAGGATCAGAAGGACGGGGGAACTTTTGACATATATCCGCACTTTGAAAATGTATGGTTGGGAGCTCTTGTTTTCTAGCTGGTTGATGGAGACAAGATTATCAGAAGTTATGCACTTAACTACACGGAAGTACTTGGATGCCTGGTGTGTATTTTTTTGGGCCACAACACCAACTCTTTTTTCTCTTTGTACATTTGGACTTTTCACATTGATGGGGCATCAACTTGATGCTGCAACGGTCTTCACTTGTGTTGCTCTGTTTAATACTTTGATATCTCCTCTAAACTCATTTCCGTGGGTCATTAATGGGTTAATTGATGCTGTCATATCTGTCAGACGGTTGAGCAGGTTCCTGTCTTGCTCTGAGCGCAAGTCAAAGCTGGAAAAGACAGCTGATGCATCTTCACCATATTTCTCCAATGATCAGTGTGAATTTACCTTTGAAGATATGGCTGTTGTGTTTGATGATTCATCTTGTTCCTGGTCAAGCAGCGATGAAAAGGAATTGAATTTGGTGCTGAATCATGTAACTCTAGGTATTCCAAAGGGTTCCTTCATTGCAGTAATTGGAGAGGTTGGTTCAGGTAAATCATCATTGTTGAATTCCATATTGGGGGAAATGCAACTTGTCCATGGATCAGTATATTCTTGTGGATCTATAGCATATGTACCACAGGTCCCATGGATTCTGTCTGGAACAATCCGTGACAATATACTGTTTGGAAAGCAATATGATCCCAAAAGATACACAGATACTTTAGAGGCAAGTGCTTTAGACGTTGATATTTCAATAATGGTTGGAGGTGACATGGCTTATATTGGAGAAAAAGGAGTCAACTTGTCAGGTGGACAGAGAGCTCGAATTGCTCTGGCAAGGGCTATTTATAATGGCTCCGATATGTTTATTCTTGATGATGTCCTCAGTGCAGTTGATGCAAGAGTTGCTCGTTGTATTTTATACAATGCAATTTTGGGTCCACTAATGAAAAAGCAAACTCGTGTGCTTTGTACGCATAACGTTCAGGCAATATCTTCTGCTGATACAATTGTGGTTATGGAAAAAGGACATGTAAAGTGGGTGGGACCTTCTGCTTGTTTGCCAGCTTCTTCATATTCAGCATTCTCTCCACTGAATGAATTTGATAAATTCTTACTGAATGAAGGAAAAGAGTGCAATGTACCTGCAGATTCTCTCACAAAAGACCAACAAAACCTTCCCTTAGAGAAAGATATTGTGCCTGCTTCAGAGGGAAGACAAGATATTATTGAAGTTGAGGCACGGAAAGAGGGAAAAGTAGAACTTTCTGTCTACAAGAATTATGCCACGTTTACTGGTTGGTTCATTTCGGTTGTAATATTTCTGTCAGCAATCCTAATGCAAGCTTCTCGTAATGGAAATGATCTGTGGCTGTCATATTGGGTTGATACAACAGGAAAGAGTCAGAAAGGATACTCTACATCCTTTTATCTGGTAATACTGTGCATCTTTTGTACTGCAAATTCAGTTCTTACATTAGTGAGGGCCTTCTCATTTGCATATGGCGGCGTACGAGCTGCAGTTAAGGTGCATGATACACTGCTGAAAAGGCTTATCAATGCACCTGTTCAATTCTTTGATCAGACACCAGGTGGAAGGATACTAAACAGGCTATCTTCAGATCTATACACAATTGATGATTCTCTTCCCTTCATTCTCAACATTCTCCTAGCTAATTTCGTTGGTCTTCTGGGAATTGCAATAGTTTTGTCATATGTTCAGGTCTTCTTCTTGCTTTTGCTATTACCGTTTTGGTATATCTACACCAAACTTCAGTTCTTCTACAGGTCAACATCTCGAGAATTGCGAAGGCTGGACAGTGTGTCTCGGTCTCCCATATATACATCCTTCACAGAGACACTTGATGGATCATCAACTATACGGGCATTTAAGTCTGAGGACTTCTTTTTGGCCAGATTCACTGACCAGGTGAAATTGTATCAACAAACTTCCTACACAGAGTTAAATGCAAGTTTGTGGCTTTCCCTACGTCTTCAGTTGTCAGCAGCATTTATCATCTCATTTGTTGCTATTATGGCTGTTCTTGGATCTCATGGTGGATTACCAATCGGTTTCAGTACCCCAGGGCTGGTTGGTTTGGCTCTATCTTATGCAGCTCCGGTTGTAAATTTACTGGGAAGCTTTTTGACAAGTTTCACTGAAACAGAGAAGGAAATGGTTTCCATTGAAAGAGCTCTTGAGTATATGGAGGTTCCTCAAGAAGAAGTTGATGGACTTCAATCTTTAAACTGCAATTGGCCATTTCAAGGACGGATTGAATTCCAAAATGTTACCTTGAGATACAAGCCATCTTTTCCAGCTGCACTTTGTGATATTAGTTTTACTATTGACGGAGGGATGCAGGTTGGTATTGTTGGAAGGACAGGAGCTGGAAAATCTAGTGTTTTGAATGCCCTTTTCCGCCTCACACCAATATGCACAGGATGTATTCTTGTGGATGATATAAACATAGCTAATGCTCCTATCAGGGATCTTCGTGGGCATTTCTCTGTTGTTCCTCAGACTCCATTTTTATTTGAAGGATCATTAAGGGACAATCTGGATCCATTCAGGCTGAGTGATGACTATAAAATTTGGAAGGCTTTGGAGAGGTGCCATGTCAAAGAGGAAGTAGAAGCAGCAGGAGGTTTAGATATTCACCTAAGCGAATCTAGGATGTCCTTTTCTGTAGGGCAACGGCAGCTTCTTTGCCTTGTACGTGCACTGCTCAAATCTTCAAAGGTGCTTTGTTTGGATGAATGCACAGCTAATGTGGACACTCAAACAGCATCTACCTTACAAAAAACCATATCTAGTGAATGCAGTGGCATGACAGTTATCACAATTGCTCATCGTATTTCCACCATTCTGAATATGGATAATGTCCTGATCCTCGACCATGGTATCCTGGTTGAACAAGGAAATCCGCAGGCTCTCCTACAAAATGAGTTCTCCAGATTTTCCAGTTTTGCTAAAGCATCTACAATGTGA

Protein Analysis

1440

Amino Acids

160.63

Weight (kDa)

7.41

Isoelectric Point (pI)

40.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 262 - 526 3e-20 ABC transporter transmembrane region
ABC_tran PF00005 605 - 738 4.8e-16 ABC transporter
ABC_membrane PF00664 883 - 1131 6.4e-43 ABC transporter transmembrane region
ABC_tran PF00005 1222 - 1367 1e-23 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2181
AatII GACGTC 1 cut(s) 426
AbsI CCTCGAGG 1 cut(s) 521
Acc36I ACCTGC 3 cut(s) 1632, 2485, 3685
AccB1I GGYRCC 1 cut(s) 3945
AccB7I CCANNNNNTGG 1 cut(s) 17
AccI GTMKAC 2 cut(s) 1172, 2604
AciI CCGC 4 cut(s) 1333, 2838, 3754, 4259
AclI AACGTT 1 cut(s) 2313
AcoI YGGCCR 4 cut(s) 767, 1077, 3243, 3590
AcuI CTGAAG 4 cut(s) 2523, 2934, 3089, 3311
AcvI CACGTG 1 cut(s) 124
AcyI GRCGYC 1 cut(s) 423
AdeI CACNNNGTG 2 cut(s) 2924, 3662
AfiI CCNNNNNNNGG 8 cut(s) 17, 74, 137, 741, 742, 1908, 3421, 3599
AflII CTTAAG 2 cut(s) 395, 1105
AflIII ACRYGT 1 cut(s) 2362
AhdI GACNNNNNGTC 1 cut(s) 3154
AjnI CCWGG 7 cut(s) 86, 1436, 1775, 2920, 3258, 3415, 4239
AjuI GAANNNNNNNTTGG 8 cut(s) 1459, 1491, 1889, 1921, 2493, 2525, 3092, 3124
AleI CACNNNNGTG 1 cut(s) 596
Alw21I GWGCWC 4 cut(s) 1362, 2155, 3529, 4057
Alw26I GTCTC 5 cut(s) 785, 1379, 3162, 3168, 3182
Alw44I GTGCAC 1 cut(s) 4053
AlwNI CAGNNNCTG 1 cut(s) 3722
Ama87I CYCGRG 2 cut(s) 521, 3129
AoxI GGCC 7 cut(s) 767, 907, 1077, 1455, 2817, 3243, 3590
ApaLI GTGCAC 1 cut(s) 4053
ApeKI GCWGC 9 cut(s) 622, 1526, 1785, 2849, 3338, 3446, 3653, 3971, 4033
ArsI GACNNNNNNTTYG 2 cut(s) 413, 445
AseI ATTAAT 2 cut(s) 1223, 1599
AspLEI GCGC 1 cut(s) 1665
AsuHPI GGTGA 4 cut(s) 1692, 2111, 3274, 3983
AvaI CYCGRG 2 cut(s) 521, 3129
AvaII GGWCC 8 cut(s) 20, 72, 517, 664, 824, 1972, 2270, 2378
BaeGI GKGCMC 1 cut(s) 4057
BaeI ACNNNNGTAYC 4 cut(s) 2328, 2361, 4219, 4252
BalI TGGCCA 4 cut(s) 769, 1079, 3245, 3592
BamHI GGATCC 1 cut(s) 3895
BanI GGYRCC 1 cut(s) 3945
BanII GRGCYC 3 cut(s) 1362, 2155, 3529
BarI GAAGNNNNNNTAC 2 cut(s) 483, 515
BauI CACGAG 1 cut(s) 2292
BbrPI CACGTG 1 cut(s) 124
BbsI GAAGAC 5 cut(s) 1528, 2554, 3011, 3049, 3317
Bbv12I GWGCWC 4 cut(s) 1362, 2155, 3529, 4057
BbvI GCAGC 9 cut(s) 634, 1513, 1797, 2836, 3350, 3458, 3640, 3983, 4045
BccI CCATC 9 cut(s) 739, 759, 875, 1223, 1375, 1501, 3191, 3557, 3649
BceAI ACGGC 2 cut(s) 119, 4046
BcgI CGANNNNNNTGC 2 cut(s) 2663, 2697
BciT130I CCWGG 7 cut(s) 88, 1438, 1777, 2922, 3260, 3417, 4241
BciVI GTATCC 5 cut(s) 910, 931, 2738, 2925, 4247
BclI TGATCA 2 cut(s) 1717, 2911
BcoDI GTCTC 5 cut(s) 785, 1379, 3162, 3168, 3182
BfaI CTAG 8 cut(s) 987, 1031, 1371, 1829, 3002, 3732, 4005, 4146
BfmI CTRYAG 6 cut(s) 1266, 1953, 2478, 2850, 3115, 4020
BfrI CTTAAG 2 cut(s) 395, 1105
BfuAI ACCTGC 3 cut(s) 1632, 2485, 3685
BfuI GTATCC 5 cut(s) 910, 931, 2738, 2925, 4247
BglII AGATCT 1 cut(s) 2953
BmcAI AGTACT 1 cut(s) 1427
Bme1390I CCNGG 7 cut(s) 88, 1438, 1777, 2922, 3260, 3417, 4241
Bme18I GGWCC 8 cut(s) 20, 72, 517, 664, 824, 1972, 2270, 2378
BmeRI GACNNNNNGTC 1 cut(s) 3154
BmeT110I CYCGRG 2 cut(s) 521, 3129
BmrFI CCNGG 7 cut(s) 88, 1438, 1777, 2922, 3260, 3417, 4241
BmrI ACTGGG 2 cut(s) 229, 3476
BmuI ACTGGG 2 cut(s) 229, 3476
BoxI GACNNNNGTC 1 cut(s) 254
BpiI GAAGAC 5 cut(s) 1528, 2554, 3011, 3049, 3317
BpmI CTGGAG 2 cut(s) 109, 4270
Bpu10I CCTNAGC 1 cut(s) 3995
BpuEI CTTGAG 5 cut(s) 253, 521, 3534, 3551, 3649
Bsa29I ATCGAT 1 cut(s) 587
BsaAI YACGTR 2 cut(s) 124, 4052
BsaHI GRCGYC 1 cut(s) 423
BsaI GGTCTC 1 cut(s) 3168
BsaJI CCNNGG 9 cut(s) 68, 903, 1053, 1589, 1927, 1976, 3415, 3416, 4231
BsaWI WCCGGW 1 cut(s) 3451
BsaXI ACNNNNNCTCC 2 cut(s) 1349, 1379
Bsc4I CCNNNNNNNGG 8 cut(s) 17, 74, 137, 741, 742, 1908, 3421, 3599
Bse118I RCCGGY 1 cut(s) 74
Bse1I ACTGG 5 cut(s) 235, 1229, 2632, 3471, 4296
Bse3DI GCAATG 3 cut(s) 162, 1851, 2476
BseBI CCWGG 7 cut(s) 88, 1438, 1777, 2922, 3260, 3417, 4241
BseCI ATCGAT 1 cut(s) 587
BseDI CCNNGG 9 cut(s) 68, 903, 1053, 1589, 1927, 1976, 3415, 3416, 4231
BseLI CCNNNNNNNGG 8 cut(s) 17, 74, 137, 741, 742, 1908, 3421, 3599
BseMI GCAATG 3 cut(s) 162, 1851, 2476
BseMII CTCAG 5 cut(s) 1650, 2230, 3219, 3866, 3899
BseNI ACTGG 5 cut(s) 235, 1229, 2632, 3471, 4296
BseRI GAGGAG 1 cut(s) 1563
BseSI GKGCMC 1 cut(s) 4057
BseXI GCAGC 9 cut(s) 634, 1513, 1797, 2836, 3350, 3458, 3640, 3983, 4045
BsgI GTGCAG 2 cut(s) 2241, 3639
BshFI GGCC 7 cut(s) 769, 909, 1079, 1457, 2819, 3245, 3592
BshNI GGYRCC 1 cut(s) 3945
BshVI ATCGAT 1 cut(s) 587
BsiHKAI GWGCWC 4 cut(s) 1362, 2155, 3529, 4057
BsiHKCI CYCGRG 2 cut(s) 521, 3129
BsiSI CCGG 2 cut(s) 75, 3452
BsiWI CGTACG 1 cut(s) 2842
BslFI GGGAC 3 cut(s) 1958, 2391, 3899
BslI CCNNNNNNNGG 8 cut(s) 17, 74, 137, 741, 742, 1908, 3421, 3599
BsmAI GTCTC 5 cut(s) 785, 1379, 3162, 3168, 3182
BsmBI CGTCTC 1 cut(s) 785
BsmFI GGGAC 3 cut(s) 1958, 2391, 3899
BsmI GAATGC 4 cut(s) 2414, 3748, 4097, 4157
BsnI GGCC 7 cut(s) 769, 909, 1079, 1457, 2819, 3245, 3592
Bso31I GGTCTC 1 cut(s) 3168
BsoBI CYCGRG 2 cut(s) 521, 3129
Bsp1286I GDGCHC 4 cut(s) 1362, 2155, 3529, 4057
Bsp1407I TGTACA 1 cut(s) 1484
Bsp19I CCATGG 3 cut(s) 1927, 1976, 4231
BspACI CCGC 4 cut(s) 1333, 2838, 3754, 4259
BspANI GGCC 7 cut(s) 769, 909, 1079, 1457, 2819, 3245, 3592
BspCNI CTCAG 5 cut(s) 1651, 2229, 3220, 3865, 3900
BspDI ATCGAT 1 cut(s) 587
BspHI TCATGA 2 cut(s) 679, 993
BspMAI CTGCAG 2 cut(s) 2482, 2854
BspMI ACCTGC 3 cut(s) 1632, 2485, 3685
BspT107I GGYRCC 1 cut(s) 3945
BspTI CTTAAG 2 cut(s) 395, 1105
BspTNI GGTCTC 1 cut(s) 3168
BsrDI GCAATG 3 cut(s) 162, 1851, 2476
BsrFI RCCGGY 1 cut(s) 74
BsrGI TGTACA 1 cut(s) 1484
BsrI ACTGG 5 cut(s) 235, 1229, 2632, 3471, 4296
BssAI RCCGGY 1 cut(s) 74
BssECI CCNNGG 9 cut(s) 68, 903, 1053, 1589, 1927, 1976, 3415, 3416, 4231
BssNAI GTATAC 1 cut(s) 1173
BssNI GRCGYC 1 cut(s) 423
BssSI CACGAG 1 cut(s) 2292
BssT1I CCWWGG 5 cut(s) 68, 903, 1927, 1976, 4231
Bst1107I GTATAC 1 cut(s) 1173
Bst2BI CACGAG 1 cut(s) 2292
Bst2UI CCWGG 7 cut(s) 88, 1438, 1777, 2922, 3260, 3417, 4241
Bst6I CTCTTC 3 cut(s) 269, 455, 2982
BstACI GRCGYC 1 cut(s) 423
BstAFI CTTAAG 2 cut(s) 395, 1105
BstAPI GCANNNNNTGC 2 cut(s) 2228, 2237
BstAUI TGTACA 1 cut(s) 1484
BstBAI YACGTR 2 cut(s) 124, 4052
BstC8I GCNNGC 7 cut(s) 286, 1136, 1206, 2397, 2535, 2676, 4263
BstDEI CTNAG 7 cut(s) 1659, 2216, 2515, 3228, 3852, 3908, 3995
BstDSI CCRYGG 4 cut(s) 1589, 1927, 1976, 4231
BstHHI GCGC 1 cut(s) 1665
BstMAI GTCTC 5 cut(s) 785, 1379, 3162, 3168, 3182
BstNI CCWGG 7 cut(s) 88, 1438, 1777, 2922, 3260, 3417, 4241
BstNSI RCATGY 1 cut(s) 2366
BstPAI GACNNNNGTC 1 cut(s) 254
BstSCI CCNGG 7 cut(s) 86, 1436, 1775, 2920, 3258, 3415, 4239
BstSFI CTRYAG 6 cut(s) 1266, 1953, 2478, 2850, 3115, 4020
BstSLI GKGCMC 1 cut(s) 4057
BstV1I GCAGC 9 cut(s) 634, 1513, 1797, 2836, 3350, 3458, 3640, 3983, 4045
BstV2I GAAGAC 5 cut(s) 1528, 2554, 3011, 3049, 3317
BstX2I RGATCY 5 cut(s) 1949, 2953, 3380, 3823, 3895
BstXI CCANNNNNNTGG 2 cut(s) 296, 661
BstYI RGATCY 5 cut(s) 1949, 2953, 3380, 3823, 3895
BstZ17I GTATAC 1 cut(s) 1173
Bsu15I ATCGAT 1 cut(s) 587
BsuI GTATCC 5 cut(s) 910, 931, 2738, 2925, 4247
BsuRI GGCC 7 cut(s) 769, 909, 1079, 1457, 2819, 3245, 3592
BsuTUI ATCGAT 1 cut(s) 587
BtgI CCRYGG 4 cut(s) 1589, 1927, 1976, 4231
BtgZI GCGATG 2 cut(s) 1201, 1803
BtsI GCAGTG 3 cut(s) 2870, 4055, 4162
BveI ACCTGC 3 cut(s) 1632, 2485, 3685
Cac8I GCNNGC 7 cut(s) 286, 1136, 1206, 2397, 2535, 2676, 4263
CaiI CAGNNNCTG 1 cut(s) 3722
CciI TCATGA 2 cut(s) 679, 993
CfoI GCGC 1 cut(s) 1665
Cfr10I RCCGGY 1 cut(s) 74
ClaI ATCGAT 1 cut(s) 587
CsiI ACCWGGT 2 cut(s) 2920, 3258
DdeI CTNAG 7 cut(s) 1659, 2216, 2515, 3228, 3852, 3908, 3995
DraI TTTAAA 3 cut(s) 177, 925, 3579
DraIII CACNNNGTG 2 cut(s) 2924, 3662
DriI GACNNNNNGTC 1 cut(s) 3154
EaeI YGGCCR 4 cut(s) 767, 1077, 3243, 3590
Eam1104I CTCTTC 3 cut(s) 269, 455, 2982
Eam1105I GACNNNNNGTC 1 cut(s) 3154
EarI CTCTTC 3 cut(s) 269, 455, 2982
EciI GGCGGA 1 cut(s) 3743
Ecl136II GAGCTC 3 cut(s) 1360, 2153, 3527
Eco130I CCWWGG 5 cut(s) 68, 903, 1927, 1976, 4231
Eco24I GRGCYC 3 cut(s) 1362, 2155, 3529
Eco31I GGTCTC 1 cut(s) 3168
Eco32I GATATC 2 cut(s) 1245, 1569
Eco47I GGWCC 8 cut(s) 20, 72, 517, 664, 824, 1972, 2270, 2378
Eco53kI GAGCTC 3 cut(s) 1360, 2153, 3527
Eco57I CTGAAG 4 cut(s) 2523, 2934, 3089, 3311
Eco72I CACGTG 1 cut(s) 124
Eco88I CYCGRG 2 cut(s) 521, 3129
EcoICRI GAGCTC 3 cut(s) 1360, 2153, 3527
EcoO109I RGGNCCY 3 cut(s) 1972, 2378, 2817
EcoRI GAATTC 2 cut(s) 1897, 3611
EcoRII CCWGG 7 cut(s) 86, 1436, 1775, 2920, 3258, 3415, 4239
EcoRV GATATC 2 cut(s) 1245, 1569
EcoT14I CCWWGG 5 cut(s) 68, 903, 1927, 1976, 4231
EcoT22I ATGCAT 2 cut(s) 688, 1696
EcoT38I GRGCYC 3 cut(s) 1362, 2155, 3529
ErhI CCWWGG 5 cut(s) 68, 903, 1927, 1976, 4231
Esp3I CGTCTC 1 cut(s) 785
FalI AAGNNNNNCTT 6 cut(s) 627, 659, 1832, 1864, 2580, 2612
FaqI GGGAC 3 cut(s) 1958, 2391, 3899
FauNDI CATATG 4 cut(s) 760, 1960, 2833, 3046
FbaI TGATCA 2 cut(s) 1717, 2911
FblI GTMKAC 2 cut(s) 1172, 2604
FriOI GRGCYC 3 cut(s) 1362, 2155, 3529
FspBI CTAG 8 cut(s) 987, 1031, 1371, 1829, 3002, 3732, 4005, 4146
GlaI GCGC 1 cut(s) 1664
GsuI CTGGAG 2 cut(s) 109, 4270
HaeIII GGCC 7 cut(s) 769, 909, 1079, 1457, 2819, 3245, 3592
HapII CCGG 2 cut(s) 75, 3452
HhaI GCGC 1 cut(s) 1665
Hin1I GRCGYC 1 cut(s) 423
Hin6I GCGC 1 cut(s) 1663
HinP1I GCGC 1 cut(s) 1663
HincII GTYRAC 4 cut(s) 1027, 1102, 2131, 3123
HindII GTYRAC 4 cut(s) 1027, 1102, 2131, 3123
HindIII AAGCTT 2 cut(s) 2676, 3472
HpaII CCGG 2 cut(s) 75, 3452
HphI GGTGA 4 cut(s) 1692, 2111, 3274, 3983
Hpy99I CGWCG 2 cut(s) 140, 428
HpyCH4IV ACGT 8 cut(s) 123, 423, 774, 2073, 2313, 2621, 3322, 4051
HpyF3I CTNAG 7 cut(s) 1659, 2216, 2515, 3228, 3852, 3908, 3995
HpySE526I ACGT 8 cut(s) 123, 423, 774, 2073, 2313, 2621, 3322, 4051
Hsp92I GRCGYC 1 cut(s) 423
HspAI GCGC 1 cut(s) 1663
Ksp22I TGATCA 2 cut(s) 1717, 2911
LmnI GCTCC 7 cut(s) 140, 1131, 1357, 2192, 3454, 3719, 3817
Lsp1109I GCAGC 9 cut(s) 634, 1513, 1797, 2836, 3350, 3458, 3640, 3983, 4045
MabI ACCWGGT 2 cut(s) 2920, 3258
MaeI CTAG 8 cut(s) 987, 1031, 1371, 1829, 3002, 3732, 4005, 4146
MaeII ACGT 8 cut(s) 123, 423, 774, 2073, 2313, 2621, 3322, 4051
MaeIII GTNAC 7 cut(s) 31, 613, 1109, 1822, 2000, 2099, 3622
MfeI CAATTG 4 cut(s) 2340, 2964, 3586, 4176
MflI RGATCY 5 cut(s) 1949, 2953, 3380, 3823, 3895
MhlI GDGCHC 4 cut(s) 1362, 2155, 3529, 4057
MlsI TGGCCA 4 cut(s) 769, 1079, 3245, 3592
MluNI TGGCCA 4 cut(s) 769, 1079, 3245, 3592
MlyI GAGTC 6 cut(s) 536, 613, 1079, 2136, 2743, 3850
MmeI TCCRAC 6 cut(s) 35, 118, 498, 680, 2074, 3688
Mox20I TGGCCA 4 cut(s) 769, 1079, 3245, 3592
Mph1103I ATGCAT 2 cut(s) 688, 1696
MscI TGGCCA 4 cut(s) 769, 1079, 3245, 3592
MslI CAYNNNNRTG 7 cut(s) 455, 596, 659, 763, 1505, 1588, 3766
Msp20I TGGCCA 4 cut(s) 769, 1079, 3245, 3592
MspA1I CMGCKG 2 cut(s) 1688, 3653
MspCI CTTAAG 2 cut(s) 395, 1105
MspI CCGG 2 cut(s) 75, 3452
MspR9I CCNGG 7 cut(s) 88, 1438, 1777, 2922, 3260, 3417, 4241
MunI CAATTG 4 cut(s) 2340, 2964, 3586, 4176
Mva1269I GAATGC 4 cut(s) 2414, 3748, 4097, 4157
MvaI CCWGG 7 cut(s) 88, 1438, 1777, 2922, 3260, 3417, 4241
NcoI CCATGG 3 cut(s) 1927, 1976, 4231
NdeI CATATG 4 cut(s) 760, 1960, 2833, 3046
NmeAIII GCCGAG 1 cut(s) 762
NmuCI GTSAC 4 cut(s) 31, 613, 2000, 2099
NsiI ATGCAT 2 cut(s) 688, 1696
NspI RCATGY 1 cut(s) 2366
OliI CACNNNNGTG 1 cut(s) 596
PaeR7I CTCGAG 2 cut(s) 521, 3129
PagI TCATGA 2 cut(s) 679, 993
PasI CCCWGGG 1 cut(s) 3416
PciI ACATGT 1 cut(s) 2362
PcsI WCGNNNNNNNCGW 1 cut(s) 3136
PctI GAATGC 4 cut(s) 2414, 3748, 4097, 4157
Pfl23II CGTACG 1 cut(s) 2842
PflMI CCANNNNNTGG 1 cut(s) 17
PleI GAGTC 6 cut(s) 536, 612, 1079, 2135, 2742, 3850
PmaCI CACGTG 1 cut(s) 124
PmlI CACGTG 1 cut(s) 124
PpsI GAGTC 6 cut(s) 536, 612, 1079, 2135, 2742, 3850
Ppu21I YACGTR 2 cut(s) 124, 4052
PpuMI RGGWCCY 2 cut(s) 1972, 2378
PscI ACATGT 1 cut(s) 2362
PshAI GACNNNNGTC 1 cut(s) 254
PshBI ATTAAT 2 cut(s) 1223, 1599
PsiI TTATAA 1 cut(s) 2181
Psp124BI GAGCTC 3 cut(s) 1362, 2155, 3529
Psp1406I AACGTT 1 cut(s) 2313
Psp5II RGGWCCY 2 cut(s) 1972, 2378
Psp6I CCWGG 7 cut(s) 86, 1436, 1775, 2920, 3258, 3415, 4239
PspCI CACGTG 1 cut(s) 124
PspGI CCWGG 7 cut(s) 86, 1436, 1775, 2920, 3258, 3415, 4239
PspLI CGTACG 1 cut(s) 2842
PspPPI RGGWCCY 2 cut(s) 1972, 2378
PspXI VCTCGAGB 1 cut(s) 521
PstI CTGCAG 2 cut(s) 2482, 2854
PstNI CAGNNNCTG 1 cut(s) 3722
PsuI RGATCY 5 cut(s) 1949, 2953, 3380, 3823, 3895
PvuII CAGCTG 2 cut(s) 1688, 3653
RseI CAYNNNNRTG 7 cut(s) 455, 596, 659, 763, 1505, 1588, 3766
SacI GAGCTC 3 cut(s) 1362, 2155, 3529
ScaI AGTACT 1 cut(s) 1427
SchI GAGTC 6 cut(s) 536, 613, 1079, 2136, 2743, 3850
ScrFI CCNGG 7 cut(s) 88, 1438, 1777, 2922, 3260, 3417, 4241
SduI GDGCHC 4 cut(s) 1362, 2155, 3529, 4057
SexAI ACCWGGT 2 cut(s) 2920, 3258
SfcI CTRYAG 6 cut(s) 1266, 1953, 2478, 2850, 3115, 4020
Sfr274I CTCGAG 2 cut(s) 521, 3129
SinI GGWCC 8 cut(s) 20, 72, 517, 664, 824, 1972, 2270, 2378
SlaI CTCGAG 2 cut(s) 521, 3129
SmiMI CAYNNNNRTG 7 cut(s) 455, 596, 659, 763, 1505, 1588, 3766
SmlI CTYRAG 9 cut(s) 268, 395, 521, 536, 1105, 3129, 3530, 3549, 3628
SmoI CTYRAG 9 cut(s) 268, 395, 521, 536, 1105, 3129, 3530, 3549, 3628
SsiI CCGC 4 cut(s) 1333, 2838, 3754, 4259
SspI AATATT 1 cut(s) 2652
SspMI CTAG 8 cut(s) 987, 1031, 1371, 1829, 3002, 3732, 4005, 4146
SstI GAGCTC 3 cut(s) 1362, 2155, 3529
StyD4I CCNGG 7 cut(s) 86, 1436, 1775, 2920, 3258, 3415, 4239
StyI CCWWGG 5 cut(s) 68, 903, 1927, 1976, 4231
TaiI ACGT 8 cut(s) 126, 426, 777, 2076, 2316, 2624, 3325, 4054
TaqI TCGA 6 cut(s) 159, 522, 587, 2155, 3130, 4227
TaqII GACCGA 1 cut(s) 3150
TatI WGTACW 3 cut(s) 1425, 1484, 2786
TauI GCSGC 1 cut(s) 2841
TseFI GTSAC 4 cut(s) 31, 613, 2000, 2099
TseI GCWGC 9 cut(s) 622, 1526, 1785, 2849, 3338, 3446, 3653, 3971, 4033
Tsp45I GTSAC 4 cut(s) 31, 613, 2000, 2099
TspGWI ACGGA 6 cut(s) 1435, 1578, 1988, 2590, 3619, 3699
Van91I CCANNNNNTGG 1 cut(s) 17
Vha464I CTTAAG 2 cut(s) 395, 1105
VneI GTGCAC 1 cut(s) 4053
VpaK11BI GGWCC 8 cut(s) 20, 72, 517, 664, 824, 1972, 2270, 2378
VspI ATTAAT 2 cut(s) 1223, 1599
XceI RCATGY 1 cut(s) 2366
XcmI CCANNNNNNNNNTGG 3 cut(s) 1236, 1974, 4204
XhoI CTCGAG 2 cut(s) 521, 3129
XmiI GTMKAC 2 cut(s) 1172, 2604
XspI CTAG 8 cut(s) 987, 1031, 1371, 1829, 3002, 3732, 4005, 4146
ZraI GACGTC 1 cut(s) 424
ZrmI AGTACT 1 cut(s) 1427
Zsp2I ATGCAT 2 cut(s) 688, 1696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.