Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002799

Physical Location & Seq

Genomic Coordinates Reverse (-)

36238116 .. 36260599

Gene Structure 22484 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00111610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2892 bp

ATGCCTGGTGTGTATTTTTTTGGGCCACAACACCAACTCTTTTTTTCTCTTTGTACGTTTGGACTTTTCACATTGATGGGGCATCAACTTGATGCTGCAACGGTCTTCACTTGTGTTGCTCTGTTTAATACTTTGATATCTCCTCTAAACTCATTTCCGTGGGTCATTAATGGGTTAATTGATGCTGTCATATCTGTCAGACGGTTGAGCAGGTTCCTGTCTTGCTCTGAGCGCAAGTCAAAGCTGGAAAAGACAGCTGATGCATCTTCACCATATTTCTCCAATGATCAGTGTGAATTTACCTCTGAAGATATGGCTGTTGTGTTTGATGATTCATCTTGTTCCTGGTCAAGCAGCGACGAAAAGGAATTGAATTTGGTGCTGAATCATGTAACTCTAGGTATTCCAAAGGGTTCCTTCATTGCAGTAATTGGAGAGGTTGGTTCAGGTAAATCATCATTGTTGAATTCCATATTGGGGGAAATGCAACTTGTCCATGGATCAGTATATTCTTGTGGATCTATAGCATATGTACCACAGGTCCCATGGATTCTGTCTGGAACAATCCGTGACAATATACTGTTTGGAAAGCAATATGATCCCAAAAGGTACACAGATACTTTAGAGGCAAGTGCTTTAGACGTTGATATTTCAATAATGGTTGGAGGTGACATGGCTTATATTGGAGAAAAAGGAGTCAACTTGTCAGGTGGACAGAGAGCTCGAATTGCTCTGGCAAGGGCTATTTATAATGGCTCCGATATGTTTATTCTTGATGATGTCCTCAGCGCAGTTGATGCAAGAGTTGCTCGTTGTATTTTATACAATGCAATTTTGGGTCCACTAATGAAAAAGCAAACTCGTGTGCTTTGTACGCATAACGTTCAGGCAATATCTTCTGCTGATACAATTGTGGTTATGGAAAAAGGACATGTAAAGTGGGTGGGACCTTCTGCTTGTTTGCCAGCTTCTTCATATTCAGCATTCTCTCCACTGAATGAATTTGATAAACTCTTACTGAATGAAGGAAAAGAGTGCAATGTAGCTGCAGATTCTCTCACAAAAGACCAACAAAACCTTCCCTTAGAGAAAGATATTGTGCCTGCTTCAGAGGGAAGACAAGATATTATTGAAGTTGAGGCGCGGAAAGAGGGAAAAGTAGAACTTTCTGTCTACAAGAATTATGCCACGTTTACTGGTTGGTTCATTTCGGTTGTAATATTTCTATCAGCAATCCTAATGCAAGCTTCTCGTAATGGAAATGATCTGTGGCTGTCATATTGGGTTGATACAACAAGAAATAGTCAGAAAGGATACTCTACATCCTTTTATCTGGTTATACTGTGCATCTTTTGTACTGCAAATTCAGTTCTTACATTAGTGAGGGCCTTCTCATTTGCATATGGCGGCTTACGAGCTGCAGTTAAGGTGCACGATACACTGCTGAAAAGGCTTATCAATGCACCTGTTCAATTCTTTGATCAGACACCAGGTGGAAGGATACTAAACAGGCTATCTTCAGATCTATACACAATTGATGATTCTCTTCCCTTCATTCTCAACATTCTCCTAGCCAATTTCGTTGGCCTTCTGGGAATTGCAATAGTTTTGTCATATGCTCAGGTCTTCTTCTTGCTTTTGCTATTGCCGTTTTGGTATATCTACACCAAACTTCAGTTCTTCTACAGGTCAACATCTCGAGAATTGCGAAGGCTGGACAGTGTGTCTCGGTCTCCCATATATACATCCTTCACAGAGACACTTGATGGATCATCAACTATACGGGCATTCAAGGCTGAGGACTTCTTTTTGGCCAGATTCACTGACCAGGTGAAATTGTATCAACAAACTTCCTACACAGAGTTAAATGCAAGTTTGTGGCTTTCCCTACGTCTTCAGTTGTTAGCAGCATTTATCATCTCATTTGTTGCTATTATGGCTGTTCTTGGATCTCATGGTGGATTACCAATTGGTTTCAGTACCCCAGGGCTGGTTGGTTTGGCTCTATCTTATGCAGCTCCGGTTGTAAATTTACTGGGAAGCTTTTTGACAAGTTTCACTGAAACAGAGAAGGAAATGGTTTCCATTGAAAGAGCTCTTGAGTATATGGAGGTTCCTCAAGAAGAAGTTGATGGACTTCAATCTTTAAACTGCAATTGGCCATTTCAAGGACGGATTGAATTCCAAAATGTTACCTTGAGATACAAGCCATCTTTTCCAGCTGCACTTTGTGATATTAGTTTTACTATTGATGGAGGGATGCAGGTTGGTATTGTTGGAAGAACAGGAGCTGGAAAATCTAGTGTTTTGAATGCCCTTTTCCGCCTCACACCAATATGCACAGGATGTATTCTTGTGGATGATATAAACATAGCTAATGCTCCTATCAGGGATCTTCGTGGGCATTTCTCTGTTGTTCCTCAGACTCCATTTTTATTTGAAGGATCATTAAGGGACAATCTGGATCCATTCAGGCTGAGTGATGACTATAAAATTTGGAAGGCTTTGGAGAGGTGCCATGTCAAAGAGGAAGTAGAAGCAGCAGGAGGTTTAGATATTCACCTAAGCGAATCTAGGATGTCATTTTCTGTAGGGCAACGGCAGCTTCTTTGCCTTGCACGTGCACTGCTCAAATCTTCAAAGGTGCTTTGTTTGGATGAATGCACAGCTAATGTGGACACTCAAACAGCATCTACCTTACAAAAAACCATATCTAGTGAATGCAGTGGCATGACAGTAATCACAATTGCTCATCGTATTTCCACCGTTTTGAATATGGATAATGTCCTGATCCTCGACCATGGTATCCTGGTTGAACAAGGAAATCCGCAGGCTCTCCTACAAAATGAGTTCTCCAGATTTTCCAGTTTTGCTAAAGCATCTACAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0055085

KEGG Pathways

Metabolic & Signaling

ko02010 map02010

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

963

Amino Acids

106.26

Weight (kDa)

5.62

Isoelectric Point (pI)

40.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	128 - 261	2.8e-16	ABC transporter
ABC_membrane	PF00664	406 - 654	4.6e-42	ABC transporter transmembrane region
ABC_tran	PF00005	745 - 890	1.1e-24	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002799)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07680 AT2G07680 AT2G07680 AT2G07680 AT2G07680 AT2G07680
fragaria_vesca	FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590
malus_domestica	MD09G1225000.v1.1
prunus_persica	Prupe.3G098500_v2.0.a1 Prupe.3G098500_v2.0.a1 Prupe.3G098500_v2.0.a1 Prupe.3G098500_v2.0.a1
pyrus_communis	pycom09g14470 pycom09g14480 pycom09g14490
rosa_chinensis	RchiOBHm_Chr2g0132931
rosa_laevigata	RLG00000019292
rosa_multiflora	Rmu_sc0001314.1_g000005
rosa_roxburghii	Rroxscaffold_2G00111610
rosa_rugosa	Rorug02G0308600
rosa_samantha	Rh2AG360900 Rh2BG366800 Rh2CG344200 Rh2DG383800
rosa_wichuraiana	Rw2G029350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	750
Acc36I	ACCTGC	2 cut(s)	201, 2254
AccB1I	GGYRCC	1 cut(s)	2514
AccI	GTMKAC	1 cut(s)	1173
AccII	CGCG	1 cut(s)	1144
AciI	CCGC	4 cut(s)	1144, 1407, 2323, 2828
AclI	AACGTT	1 cut(s)	882
AcoI	YGGCCR	2 cut(s)	1812, 2159
AcsI	RAATTY	8 cut(s)	296, 373, 466, 1001, 1363, 2029, 2180, 2493
AcuI	CTGAAG	5 cut(s)	327, 1092, 1503, 1658, 1880
AcvI	CACGTG	1 cut(s)	2621
AdeI	CACNNNGTG	2 cut(s)	1493, 2231
AfaI	GTAC	6 cut(s)	55, 534, 611, 874, 1357, 1981
AfiI	CCNNNNNNNGG	3 cut(s)	477, 1990, 2168
AflIII	ACRYGT	1 cut(s)	931
AhdI	GACNNNNNGTC	1 cut(s)	1723
AjnI	CCWGG	6 cut(s)	4, 344, 1489, 1827, 1984, 2808
AjuI	GAANNNNNNNTTGG	6 cut(s)	458, 490, 1062, 1094, 1661, 1693
Alw21I	GWGCWC	4 cut(s)	724, 1434, 2098, 2626
Alw26I	GTCTC	3 cut(s)	1731, 1737, 1751
Alw44I	GTGCAC	2 cut(s)	1430, 2622
AlwNI	CAGNNNCTG	1 cut(s)	2291
Ama87I	CYCGRG	1 cut(s)	1698
AoxI	GGCC	5 cut(s)	23, 1386, 1585, 1812, 2159
ApaLI	GTGCAC	2 cut(s)	1430, 2622
ApeKI	GCWGC	9 cut(s)	95, 354, 1046, 1418, 1907, 2015, 2222, 2540, 2602
ApoI	RAATTY	8 cut(s)	296, 373, 466, 1001, 1363, 2029, 2180, 2493
AseI	ATTAAT	1 cut(s)	168
AspLEI	GCGC	3 cut(s)	234, 791, 1144
AspS9I	GGNCC	5 cut(s)	23, 541, 839, 947, 1386
AsuHPI	GGTGA	4 cut(s)	261, 680, 1843, 2552
AvaI	CYCGRG	1 cut(s)	1698
AvaII	GGWCC	3 cut(s)	541, 839, 947
BaeGI	GKGCMC	2 cut(s)	1434, 2626
BaeI	ACNNNNGTAYC	4 cut(s)	897, 930, 2788, 2821
BalI	TGGCCA	2 cut(s)	1814, 2161
BamHI	GGATCC	1 cut(s)	2464
BanI	GGYRCC	1 cut(s)	2514
BanII	GRGCYC	2 cut(s)	724, 2098
BauI	CACGAG	1 cut(s)	861
BbrPI	CACGTG	1 cut(s)	2621
BbsI	GAAGAC	4 cut(s)	97, 1123, 1618, 1886
Bbv12I	GWGCWC	4 cut(s)	724, 1434, 2098, 2626
BbvCI	CCTCAGC	2 cut(s)	785, 1797
BbvI	GCAGC	9 cut(s)	82, 366, 1033, 1405, 1919, 2027, 2209, 2552, 2614
BccI	CCATC	5 cut(s)	70, 1760, 2126, 2218, 2246
BceAI	ACGGC	2 cut(s)	1633, 2615
BcgI	CGANNNNNNTGC	2 cut(s)	1232, 1266
BciT130I	CCWGG	6 cut(s)	6, 346, 1491, 1829, 1986, 2810
BciVI	GTATCC	3 cut(s)	1307, 1494, 2816
BclI	TGATCA	2 cut(s)	286, 1480
BcoDI	GTCTC	3 cut(s)	1731, 1737, 1751
BfaI	CTAG	5 cut(s)	398, 1571, 2301, 2574, 2715
BfmI	CTRYAG	5 cut(s)	522, 1047, 1419, 1684, 2589
BfuAI	ACCTGC	2 cut(s)	201, 2254
BfuI	GTATCC	3 cut(s)	1307, 1494, 2816
BglII	AGATCT	1 cut(s)	1522
Bme1390I	CCNGG	6 cut(s)	6, 346, 1491, 1829, 1986, 2810
Bme18I	GGWCC	3 cut(s)	541, 839, 947
BmeRI	GACNNNNNGTC	1 cut(s)	1723
BmeT110I	CYCGRG	1 cut(s)	1698
BmgT120I	GGNCC	5 cut(s)	23, 541, 839, 947, 1386
BmiI	GGNNCC	9 cut(s)	215, 415, 543, 757, 840, 948, 2115, 2466, 2516
BmrFI	CCNGG	6 cut(s)	6, 346, 1491, 1829, 1986, 2810
BmrI	ACTGGG	1 cut(s)	2045
BmuI	ACTGGG	1 cut(s)	2045
BpiI	GAAGAC	4 cut(s)	97, 1123, 1618, 1886
BpmI	CTGGAG	1 cut(s)	2839
Bpu10I	CCTNAGC	4 cut(s)	785, 1620, 1797, 2564
BpuEI	CTTGAG	3 cut(s)	2103, 2120, 2218
BsaAI	YACGTR	1 cut(s)	2621
BsaI	GGTCTC	1 cut(s)	1737
BsaJI	CCNNGG	6 cut(s)	158, 496, 545, 1984, 1985, 2800
BsaWI	WCCGGW	1 cut(s)	2020
Bsc4I	CCNNNNNNNGG	3 cut(s)	477, 1990, 2168
Bse1I	ACTGG	3 cut(s)	1201, 2040, 2865
Bse3DI	GCAATG	2 cut(s)	420, 1045
BseBI	CCWGG	6 cut(s)	6, 346, 1491, 1829, 1986, 2810
BseDI	CCNNGG	6 cut(s)	158, 496, 545, 1984, 1985, 2800
BseGI	GGATG	7 cut(s)	1322, 1745, 2265, 2351, 2365, 2583, 2662
BseLI	CCNNNNNNNGG	3 cut(s)	477, 1990, 2168
BseMI	GCAATG	2 cut(s)	420, 1045
BseMII	CTCAG	6 cut(s)	219, 799, 1634, 1788, 2435, 2468
BseNI	ACTGG	3 cut(s)	1201, 2040, 2865
BseRI	GAGGAG	1 cut(s)	132
BseSI	GKGCMC	2 cut(s)	1434, 2626
BseXI	GCAGC	9 cut(s)	82, 366, 1033, 1405, 1919, 2027, 2209, 2552, 2614
BsgI	GTGCAG	1 cut(s)	2208
Bsh1236I	CGCG	1 cut(s)	1144
BshFI	GGCC	5 cut(s)	25, 1388, 1587, 1814, 2161
BshNI	GGYRCC	1 cut(s)	2514
BsiHKAI	GWGCWC	4 cut(s)	724, 1434, 2098, 2626
BsiHKCI	CYCGRG	1 cut(s)	1698
BsiSI	CCGG	1 cut(s)	2021
BslFI	GGGAC	3 cut(s)	527, 960, 2468
BslI	CCNNNNNNNGG	3 cut(s)	477, 1990, 2168
BsmAI	GTCTC	3 cut(s)	1731, 1737, 1751
BsmFI	GGGAC	3 cut(s)	527, 960, 2468
BsmI	GAATGC	5 cut(s)	983, 1787, 2317, 2666, 2726
BsnI	GGCC	5 cut(s)	25, 1388, 1587, 1814, 2161
Bso31I	GGTCTC	1 cut(s)	1737
BsoBI	CYCGRG	1 cut(s)	1698
Bsp1286I	GDGCHC	4 cut(s)	724, 1434, 2098, 2626
Bsp19I	CCATGG	3 cut(s)	496, 545, 2800
BspACI	CCGC	4 cut(s)	1144, 1407, 2323, 2828
BspANI	GGCC	5 cut(s)	25, 1388, 1587, 1814, 2161
BspCNI	CTCAG	6 cut(s)	220, 798, 1633, 1789, 2434, 2469
BspFNI	CGCG	1 cut(s)	1144
BspLI	GGNNCC	9 cut(s)	215, 415, 543, 757, 840, 948, 2115, 2466, 2516
BspMAI	CTGCAG	2 cut(s)	1051, 1423
BspMI	ACCTGC	2 cut(s)	201, 2254
BspT107I	GGYRCC	1 cut(s)	2514
BspTNI	GGTCTC	1 cut(s)	1737
BsrDI	GCAATG	2 cut(s)	420, 1045
BsrI	ACTGG	3 cut(s)	1201, 2040, 2865
BssECI	CCNNGG	6 cut(s)	158, 496, 545, 1984, 1985, 2800
BssSI	CACGAG	1 cut(s)	861
BssT1I	CCWWGG	3 cut(s)	496, 545, 2800
Bst2BI	CACGAG	1 cut(s)	861
Bst2UI	CCWGG	6 cut(s)	6, 346, 1491, 1829, 1986, 2810
Bst4CI	ACNGT	7 cut(s)	103, 204, 582, 1344, 1721, 2737, 2767
Bst6I	CTCTTC	1 cut(s)	1551
BstAPI	GCANNNNNTGC	2 cut(s)	797, 806
BstBAI	YACGTR	1 cut(s)	2621
BstC8I	GCNNGC	4 cut(s)	966, 1104, 1245, 2832
BstDEI	CTNAG	8 cut(s)	228, 785, 1084, 1620, 1797, 2421, 2477, 2564
BstDSI	CCRYGG	4 cut(s)	158, 496, 545, 2800
BstF5I	GGATG	7 cut(s)	1322, 1745, 2265, 2351, 2365, 2583, 2662
BstFNI	CGCG	1 cut(s)	1144
BstHHI	GCGC	3 cut(s)	234, 791, 1144
BstMAI	GTCTC	3 cut(s)	1731, 1737, 1751
BstMWI	GCNNNNNNNGC	9 cut(s)	231, 728, 797, 806, 874, 1450, 1793, 1937, 2602
BstNI	CCWGG	6 cut(s)	6, 346, 1491, 1829, 1986, 2810
BstNSI	RCATGY	1 cut(s)	935
BstSCI	CCNGG	6 cut(s)	4, 344, 1489, 1827, 1984, 2808
BstSFI	CTRYAG	5 cut(s)	522, 1047, 1419, 1684, 2589
BstSLI	GKGCMC	2 cut(s)	1434, 2626
BstUI	CGCG	1 cut(s)	1144
BstV1I	GCAGC	9 cut(s)	82, 366, 1033, 1405, 1919, 2027, 2209, 2552, 2614
BstV2I	GAAGAC	4 cut(s)	97, 1123, 1618, 1886
BstX2I	RGATCY	5 cut(s)	518, 1522, 1949, 2392, 2464
BstYI	RGATCY	5 cut(s)	518, 1522, 1949, 2392, 2464
BsuI	GTATCC	3 cut(s)	1307, 1494, 2816
BsuRI	GGCC	5 cut(s)	25, 1388, 1587, 1814, 2161
BtgI	CCRYGG	4 cut(s)	158, 496, 545, 2800
BtsCI	GGATG	7 cut(s)	1322, 1745, 2265, 2351, 2365, 2583, 2662
BtsI	GCAGTG	3 cut(s)	1439, 2624, 2731
BtsIMutI	CAGTG	8 cut(s)	296, 992, 1439, 1726, 1821, 2058, 2624, 2731
BveI	ACCTGC	2 cut(s)	201, 2254
Cac8I	GCNNGC	4 cut(s)	966, 1104, 1245, 2832
CaiI	CAGNNNCTG	1 cut(s)	2291
CfoI	GCGC	3 cut(s)	234, 791, 1144
Cfr13I	GGNCC	5 cut(s)	23, 541, 839, 947, 1386
CsiI	ACCWGGT	2 cut(s)	1489, 1827
Csp6I	GTAC	6 cut(s)	54, 533, 610, 873, 1356, 1980
CviAII	CATG	9 cut(s)	389, 497, 546, 673, 932, 1955, 2519, 2731, 2801
CviQI	GTAC	6 cut(s)	54, 533, 610, 873, 1356, 1980
DdeI	CTNAG	8 cut(s)	228, 785, 1084, 1620, 1797, 2421, 2477, 2564
DraI	TTTAAA	1 cut(s)	2148
DraIII	CACNNNGTG	2 cut(s)	1493, 2231
DriI	GACNNNNNGTC	1 cut(s)	1723
EaeI	YGGCCR	2 cut(s)	1812, 2159
Eam1104I	CTCTTC	1 cut(s)	1551
Eam1105I	GACNNNNNGTC	1 cut(s)	1723
EarI	CTCTTC	1 cut(s)	1551
EciI	GGCGGA	1 cut(s)	2312
Ecl136II	GAGCTC	2 cut(s)	722, 2096
Eco130I	CCWWGG	3 cut(s)	496, 545, 2800
Eco24I	GRGCYC	2 cut(s)	724, 2098
Eco31I	GGTCTC	1 cut(s)	1737
Eco32I	GATATC	1 cut(s)	138
Eco47I	GGWCC	3 cut(s)	541, 839, 947
Eco53kI	GAGCTC	2 cut(s)	722, 2096
Eco57I	CTGAAG	5 cut(s)	327, 1092, 1503, 1658, 1880
Eco72I	CACGTG	1 cut(s)	2621
Eco88I	CYCGRG	1 cut(s)	1698
EcoICRI	GAGCTC	2 cut(s)	722, 2096
EcoO109I	RGGNCCY	3 cut(s)	541, 947, 1386
EcoRI	GAATTC	2 cut(s)	466, 2180
EcoRII	CCWGG	6 cut(s)	4, 344, 1489, 1827, 1984, 2808
EcoRV	GATATC	1 cut(s)	138
EcoT14I	CCWWGG	3 cut(s)	496, 545, 2800
EcoT22I	ATGCAT	1 cut(s)	265
EcoT38I	GRGCYC	2 cut(s)	724, 2098
ErhI	CCWWGG	3 cut(s)	496, 545, 2800
FaeI	CATG	9 cut(s)	392, 500, 549, 676, 935, 1958, 2522, 2734, 2804
FalI	AAGNNNNNCTT	4 cut(s)	401, 433, 1149, 1181
FaqI	GGGAC	3 cut(s)	527, 960, 2468
FatI	CATG	9 cut(s)	388, 496, 545, 672, 931, 1954, 2518, 2730, 2800
FauNDI	CATATG	3 cut(s)	529, 1402, 1615
FbaI	TGATCA	2 cut(s)	286, 1480
FblI	GTMKAC	1 cut(s)	1173
FokI	GGATG	7 cut(s)	1309, 1732, 2272, 2358, 2372, 2590, 2669
FriOI	GRGCYC	2 cut(s)	724, 2098
FspBI	CTAG	5 cut(s)	398, 1571, 2301, 2574, 2715
GlaI	GCGC	3 cut(s)	233, 790, 1143
GsuI	CTGGAG	1 cut(s)	2839
HaeIII	GGCC	5 cut(s)	25, 1388, 1587, 1814, 2161
HapII	CCGG	1 cut(s)	2021
HhaI	GCGC	3 cut(s)	234, 791, 1144
Hin1II	CATG	9 cut(s)	392, 500, 549, 676, 935, 1958, 2522, 2734, 2804
Hin6I	GCGC	3 cut(s)	232, 789, 1142
HinP1I	GCGC	3 cut(s)	232, 789, 1142
HincII	GTYRAC	2 cut(s)	700, 1692
HindII	GTYRAC	2 cut(s)	700, 1692
HindIII	AAGCTT	2 cut(s)	1245, 2041
HinfI	GANTC	9 cut(s)	332, 385, 550, 696, 1052, 1541, 1818, 2425, 2570
HpaII	CCGG	1 cut(s)	2021
HphI	GGTGA	4 cut(s)	261, 680, 1843, 2552
Hpy188I	TCNGA	9 cut(s)	200, 229, 307, 760, 1111, 1308, 1485, 1522, 2424
Hpy188III	TCNNGA	9 cut(s)	558, 773, 1698, 1700, 2099, 2120, 2462, 2788, 2856
Hpy99I	CGWCG	1 cut(s)	362
HpyCH4III	ACNGT	7 cut(s)	103, 204, 582, 1344, 1721, 2737, 2767
HpyCH4IV	ACGT	6 cut(s)	56, 642, 882, 1190, 1891, 2620
HpyF10VI	GCNNNNNNNGC	9 cut(s)	231, 728, 797, 806, 874, 1450, 1793, 1937, 2602
HpyF3I	CTNAG	8 cut(s)	228, 785, 1084, 1620, 1797, 2421, 2477, 2564
HpySE526I	ACGT	6 cut(s)	56, 642, 882, 1190, 1891, 2620
Hsp92II	CATG	9 cut(s)	392, 500, 549, 676, 935, 1958, 2522, 2734, 2804
HspAI	GCGC	3 cut(s)	232, 789, 1142
Ksp22I	TGATCA	2 cut(s)	286, 1480
LmnI	GCTCC	4 cut(s)	761, 2023, 2288, 2386
Lsp1109I	GCAGC	9 cut(s)	82, 366, 1033, 1405, 1919, 2027, 2209, 2552, 2614
MabI	ACCWGGT	2 cut(s)	1489, 1827
MaeI	CTAG	5 cut(s)	398, 1571, 2301, 2574, 2715
MaeII	ACGT	6 cut(s)	56, 642, 882, 1190, 1891, 2620
MaeIII	GTNAC	4 cut(s)	391, 569, 668, 2191
MfeI	CAATTG	5 cut(s)	909, 1533, 1968, 2155, 2745
MflI	RGATCY	5 cut(s)	518, 1522, 1949, 2392, 2464
MhlI	GDGCHC	4 cut(s)	724, 1434, 2098, 2626
MlsI	TGGCCA	2 cut(s)	1814, 2161
MluNI	TGGCCA	2 cut(s)	1814, 2161
MlyI	GAGTC	2 cut(s)	705, 2419
MmeI	TCCRAC	2 cut(s)	643, 2257
Mox20I	TGGCCA	2 cut(s)	1814, 2161
Mph1103I	ATGCAT	1 cut(s)	265
MscI	TGGCCA	2 cut(s)	1814, 2161
MseI	TTAA	7 cut(s)	126, 168, 176, 1425, 1865, 2147, 2450
MslI	CAYNNNNRTG	3 cut(s)	74, 157, 2335
Msp20I	TGGCCA	2 cut(s)	1814, 2161
MspA1I	CMGCKG	2 cut(s)	257, 2222
MspI	CCGG	1 cut(s)	2021
MspR9I	CCNGG	6 cut(s)	6, 346, 1491, 1829, 1986, 2810
MunI	CAATTG	5 cut(s)	909, 1533, 1968, 2155, 2745
Mva1269I	GAATGC	5 cut(s)	983, 1787, 2317, 2666, 2726
MvaI	CCWGG	6 cut(s)	6, 346, 1491, 1829, 1986, 2810
MvnI	CGCG	1 cut(s)	1144
MwoI	GCNNNNNNNGC	9 cut(s)	231, 728, 797, 806, 874, 1450, 1793, 1937, 2602
NcoI	CCATGG	3 cut(s)	496, 545, 2800
NdeI	CATATG	3 cut(s)	529, 1402, 1615
NlaIII	CATG	9 cut(s)	392, 500, 549, 676, 935, 1958, 2522, 2734, 2804
NlaIV	GGNNCC	9 cut(s)	215, 415, 543, 757, 840, 948, 2115, 2466, 2516
NmuCI	GTSAC	2 cut(s)	569, 668
NsiI	ATGCAT	1 cut(s)	265
NspI	RCATGY	1 cut(s)	935
PaeR7I	CTCGAG	1 cut(s)	1698
PasI	CCCWGGG	1 cut(s)	1985
PciI	ACATGT	1 cut(s)	931
PcsI	WCGNNNNNNNCGW	1 cut(s)	1705
PctI	GAATGC	5 cut(s)	983, 1787, 2317, 2666, 2726
PfeI	GAWTC	7 cut(s)	332, 385, 550, 1052, 1541, 1818, 2570
PleI	GAGTC	2 cut(s)	704, 2419
PmaCI	CACGTG	1 cut(s)	2621
PmlI	CACGTG	1 cut(s)	2621
PpsI	GAGTC	2 cut(s)	704, 2419
Ppu21I	YACGTR	1 cut(s)	2621
PpuMI	RGGWCCY	2 cut(s)	541, 947
PscI	ACATGT	1 cut(s)	931
PshBI	ATTAAT	1 cut(s)	168
PsiI	TTATAA	1 cut(s)	750
Psp124BI	GAGCTC	2 cut(s)	724, 2098
Psp1406I	AACGTT	1 cut(s)	882
Psp5II	RGGWCCY	2 cut(s)	541, 947
Psp6I	CCWGG	6 cut(s)	4, 344, 1489, 1827, 1984, 2808
PspCI	CACGTG	1 cut(s)	2621
PspGI	CCWGG	6 cut(s)	4, 344, 1489, 1827, 1984, 2808
PspN4I	GGNNCC	9 cut(s)	215, 415, 543, 757, 840, 948, 2115, 2466, 2516
PspPI	GGNCC	5 cut(s)	23, 541, 839, 947, 1386
PspPPI	RGGWCCY	2 cut(s)	541, 947
PstI	CTGCAG	2 cut(s)	1051, 1423
PstNI	CAGNNNCTG	1 cut(s)	2291
PsuI	RGATCY	5 cut(s)	518, 1522, 1949, 2392, 2464
PvuII	CAGCTG	2 cut(s)	257, 2222
RsaI	GTAC	6 cut(s)	55, 534, 611, 874, 1357, 1981
RsaNI	GTAC	6 cut(s)	54, 533, 610, 873, 1356, 1980
RseI	CAYNNNNRTG	3 cut(s)	74, 157, 2335
SacI	GAGCTC	2 cut(s)	724, 2098
SaqAI	TTAA	7 cut(s)	126, 168, 176, 1425, 1865, 2147, 2450
Sau96I	GGNCC	5 cut(s)	23, 541, 839, 947, 1386
SchI	GAGTC	2 cut(s)	705, 2419
ScrFI	CCNGG	6 cut(s)	6, 346, 1491, 1829, 1986, 2810
SduI	GDGCHC	4 cut(s)	724, 1434, 2098, 2626
SexAI	ACCWGGT	2 cut(s)	1489, 1827
SfcI	CTRYAG	5 cut(s)	522, 1047, 1419, 1684, 2589
Sfr274I	CTCGAG	1 cut(s)	1698
SinI	GGWCC	3 cut(s)	541, 839, 947
SlaI	CTCGAG	1 cut(s)	1698
SmiMI	CAYNNNNRTG	3 cut(s)	74, 157, 2335
SmlI	CTYRAG	4 cut(s)	1698, 2099, 2118, 2197
SmoI	CTYRAG	4 cut(s)	1698, 2099, 2118, 2197
SsiI	CCGC	4 cut(s)	1144, 1407, 2323, 2828
SspI	AATATT	1 cut(s)	1221
SspMI	CTAG	5 cut(s)	398, 1571, 2301, 2574, 2715
SstI	GAGCTC	2 cut(s)	724, 2098
StyD4I	CCNGG	6 cut(s)	4, 344, 1489, 1827, 1984, 2808
StyI	CCWWGG	3 cut(s)	496, 545, 2800
TaaI	ACNGT	7 cut(s)	103, 204, 582, 1344, 1721, 2737, 2767
TaiI	ACGT	6 cut(s)	59, 645, 885, 1193, 1894, 2623
TaqI	TCGA	3 cut(s)	724, 1699, 2796
TaqII	GACCGA	1 cut(s)	1719
TatI	WGTACW	1 cut(s)	1355
TauI	GCSGC	1 cut(s)	1410
TfiI	GAWTC	7 cut(s)	332, 385, 550, 1052, 1541, 1818, 2570
Tru1I	TTAA	7 cut(s)	126, 168, 176, 1425, 1865, 2147, 2450
Tru9I	TTAA	7 cut(s)	126, 168, 176, 1425, 1865, 2147, 2450
TscAI	CASTG	8 cut(s)	296, 999, 1446, 1726, 1828, 2065, 2631, 2731
TseFI	GTSAC	2 cut(s)	569, 668
TseI	GCWGC	9 cut(s)	95, 354, 1046, 1418, 1907, 2015, 2222, 2540, 2602
Tsp45I	GTSAC	2 cut(s)	569, 668
TspDTI	ATGAA	9 cut(s)	324, 409, 863, 963, 1014, 1038, 1195, 1543, 2673
TspGWI	ACGGA	3 cut(s)	147, 557, 2188
TspRI	CASTG	8 cut(s)	296, 999, 1446, 1726, 1828, 2065, 2631, 2731
VneI	GTGCAC	2 cut(s)	1430, 2622
VpaK11BI	GGWCC	3 cut(s)	541, 839, 947
VspI	ATTAAT	1 cut(s)	168
XapI	RAATTY	8 cut(s)	296, 373, 466, 1001, 1363, 2029, 2180, 2493
XceI	RCATGY	1 cut(s)	935
XcmI	CCANNNNNNNNNTGG	1 cut(s)	543
XhoI	CTCGAG	1 cut(s)	1698
XmiI	GTMKAC	1 cut(s)	1173
XspI	CTAG	5 cut(s)	398, 1571, 2301, 2574, 2715
Zsp2I	ATGCAT	1 cut(s)	265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.