Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002799

Physical Location & Seq

Genomic Coordinates Forward (+)

49748864 .. 49769307

Gene Structure 20444 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019292

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4404 bp

ATGGACGATTTCACGAACCTGATCTGCCCTGATTCTCCCTCCGTATGGGACGGAAATGGACTTCCCAAGTGCTACGGGAATCTATATCCTTTTGAACTCCTTCTGTTTTGCTTCACTCTTGCTGTGATTTTCGTACTCGGAATCACTCGAAGGACCGGCAGAAGAACCTGGAGGATGAACTTTTCCGAGAGGTTTTTCTTGCACGTGCTTCCTGCCGTCGGAGCTTGTTTAGCATTTTTCGACATTGCTTTACTTTTAAAGAAAGATCGTGATGGTGTCTTGGTTGCAAAACATGAATGGTTGTTCAGATGTTCCCAGTTTGCTGTCTGGACAGTTGTCATACTCTTCTCAAGGTGTTTCAATGCTTGCCATATTTTTGGCAATCGCATCTTGTGTTTCTGGTGGCTTGTAAAAATACTTTTGGCAACGCTTCATTTGTTCACAACATATCCTTCATTCAAGGTCTTGTTATCTCTTAAGGAGATTTGTACTGTTTCATTGGACGTCATTTTTGGTATATCAATTAACATCATCAGAATGAAGAGGGCATCATCCAACAGAAGTTCAATGGAAGATTCACTACTTTCTGCTGACATGGACCTCGAGGAAGGTTCTCTCAAGGACTCTGGCGACAATCAGAGCTATTTCAATCTTATGACATTCAGATCAATCACTTCTGTGATGAGTCATGGTGTCACAAAGCAGCTTGAATTTGAAGATTTGCTTCAACTTCCCACTGATATGGACCCTTGTTCCTGTCATGATGCATTATTTAGCTGTTGGAAATCCCAACAGAGTAGTTGCCCTGATCCATCCCTGTTTATGGCAATCTGTTCTGCATATGGATGGCCATACGTTCATCTGGGCTTGTTAAAGGTACTTAATGATTCTGTTGGTTTTGCCGGACCGTTGCTTCTCAATAAGCTAATTCGCTTCCTTCAACAAGGTTCGCAGAATTTGGATGGCTATGTTCTTGCAGTATCGTTGGGCCTCATATCTATCTTTAAATCGTTTTTGGATACACAATATACTTTTCATCTTTCAAAATTGAAGTTAAAGCTACGATCTAGTATCATGACAGTTATATATCAGAAGTGCCTCTGTGTCAACCTAGCAGAGCGATCAAAGTTTACTGAGGGGGAAATTCAGACATTCATGGCCATAGATTCTGATCGCATTGTCAACTTAAGTAACACTCTCCATGATATGTGGAGCTTGCCTTTACAAATTGGGGTGGCTTTGTTCCTTTTGTATACACAAGTCAAATTTGCATTTGTTTCTGGGCTTGCAATTACCATCGCATTAATACCAGTGAATAAATGGATATCTACATTGATTGCAAGAGCTACAGTGAAAATGATGAAGCAGAAGGATGAGAGGATCAGAAGGACGGGGGAACTTTTGACATATATCCGCACTTTGAAAATGTATGGTTGGGAGCTCCTGTTTTCTAACTGGTTGATGGAGACAAGATTATCAGAAGTTATGCACTTAACTACACGGAAGTACTTGGATGCCTGGTGTGTATTTTTTTGGGCCACGACACCAACTCTTTTTTCTCTTTGTACATTTGGACTTTTCACATTGATGGGGCATCAACTTGATGCTGCAACGGTCTTCACTTGTGTTGCTCTGTTTAATACTTTGATATCTCCTCTAAACTCATTTCCGTGGGTCATTAATGGGTTAATTGATGCTGTCATATCTGTCAGACGGTTGAGCAGGTTCCTGTCTTGCTCTGAGCGCAAATCAAAGCTGGAAAAGACAGCTGGTGCATCTTCACCATATTTCTCCAATGATCAGTGTGAATTTACCTTTGAAGATATGGCTGTTGTGTTTGATGATTCATCTTGTTCCTGGTCAAGCAGTGACGAAAAGGAATTGAATTTGGTGCTGAATCATGTAACTCTAGGTATTCCAAAGGGTTCCTTCATTGCAGTAATCGGAGAGGTTGGTTCAGGTAAATCATCATTGTTGAATTCCATATTGGGGGAATTACAACTTGTCCATGGATCAGTATATTCTTGTGGATCTATAGCATATGTACCACAGGTCCCATGGATTCTGTCTGGAACAATCCGCGACAATATACTGTTTGGAAAGCAATACGATCCCAAAAGATACACAGATACTTTAGAGGCAAGTGCTTTAGACGTTGATATTTCAATAATGGTTGGAGGTGACACGGCTTATATTGGAGAAAAAGGAGTCAACTTGTCAGGTGGACAGAGAGCTCGAATTGCTCTGGCAAGGGCTATTTATAATGGCTCCGATATGTTTATTCTTGATGATGTCCTCAGCGCAGTTGATGCAAGAGTTGCTCGTTGTATTTTATACAATGCAATTTTGGGTCCACTAATGAAAAAGCAAACTCGTGTGCTTTGCACGCATAACGTTCAGGCAATATCTTCTGCTGATACAATTGTTGTTATGGAAAAAGGACATGTAAAGTGGGTGGGACCTTCTGCTTGTTTGCCAGCTTCTTCATATTCAGCATTCTCTCCACTGAATGAATTTGATAAATTCTTACTGAATGAAGGAAAAGAGTGCAATGTAGCTGCAGATTCTCTCACAAAAGACCAACAAAACCTTCCCTTAGAGAAAGATATTGTGCCTGCTTCAGAGGGAAGACAAGATATTATTGAAGTTGAGGCGCGGAAAGAGGGAAAAGTAGAACTTTCTGTCTACAAGAATTATGCCACGTTTACCGGTTGGTTCATTTCGGTTGTAATATTTCTATCAGCAATCCTAATGCAAGCTTCTCGTAATGGAAATGATCTGTGGCTGTCATATTGGGTTGATACAACAGGAAATAGTCAGAAAGGATACTCTACATCCTTTTATCTGGTTATACTGTGCATCTTTTGTACTGCAAATTCAGTTCTTACATTAGTGAGGGCCTTCTCATTTGCATATGGCGGGTTACGAGCTGCAGTTAAGGTGCATGATACACTGCTGAAAAGGCTTATCAATGCACCTGTTCAATTCTTTGATCAGACACCAGGTGGAAGGATACTAAACAGGCTATCTTCAGATCTATACACAATTGATGATTCTCTTCCCTTCATTCTCAACATTCTCCTAGCCAATTTCGTTGGCCTTCTGGGAATTGCAATAGTTTTGTCATATGTTCAGGTCTTCTTCTTGCTTTTGCTATTACCGTTTTGGTATATCTACACCAAACTTCAGTTCTTCTACAGGTCGACATCTCGAGAATTGCGAAGGCTGGACAGTGTGTCTCGGTCTCCCATATATACATCCTTCACAGAGACACTTGATGGATCATCAACTATACGGGCATTCAAGTCTGAGGACTTCTTTTTGGCCAGATTCACTGACCAGGTGAAATTGTATCAACAAACTTCCTACACAGAGTTAAATGCAAGTTTGTGGCTTTCCCTACGTCTTCAGTTGTTAGCAGCATTTATCATCTCGTTTGTTGCTATTATGGCTGTTCTTGGATCTCATGGTGGATTACCAATCGGTTTCAGTACCCCAGGGCTGGTTGGTTTGGCTCTATCTTATGCAGCTCCGGTTGTAAATTTACTGGGAAGCTTTTTGACAAGTTTTACTGAAACAGAGAAGGAAATGGTTTCCATTGAAAGAGCTCTTGAGTATATGGAGGTTCCTCAAGAAGAAGTTGATGGACTTCAATCTTTAAACTGCAATTGGCCATTTCAAGGACGGATTGAATTCCAAAATGTTACCTTGAGATACAAGCCATCTTTTCCAGCTGCACTTTGTGATATTAGTTTTACTATTGACGGAGGGATGCAGGTTGGTATTGTTGGAAGGACAGGAGCTGGAAAATCTAGTGTTTTGAATGCCCTTTTCCGCCTCACACCAATATGCACAGGATGTATTCTTGTGGATGATATAAACATAGCTACTGCTCCTATCAGGGATCTTCGTGGGCATTTCTCTGTTGTTCCTCAGACTCCATTTTTATTTGAAGGATCATTAAGGGACAATCTGGATCCATTCAGGCTGAGTGATGACTATAAAATTTGGAAGGCTTTGGAGAGGTGCCATGTCAAAGAGGAAGTAGAAGCAGCAGGAGGTTTAGATATTCACCTAAGCGAATCTAGGATGTCATTTTCTGTAGGGCAACGGCAGCTTCTTTGCCTTGCACGTGCACTGCTCAAATCTTCAAAGGTGCTTTGTTTGGATGAATGCACAGCTAATGTGGACGCTCAAACAGCATCTACCTTACAAAAAACCATATCTAGTGAATGCAGTGGCATGACAGTTATCACAATTGCTCATCGTATTTCCACAGTTTTGAATATGGATAATGTCCTGATCCTCGACCATGGTATCCTGGTTGAACAAGGAAATCCGCAGGCTCTCCTACAAAATGAGTTCTCCAGATTTTCCAGTTTTGCTAAAGCATCTACAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0055085

KEGG Pathways

Metabolic & Signaling

ko02010 map02010

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1468

Amino Acids

163.79

Weight (kDa)

6.54

Isoelectric Point (pI)

41.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	289 - 553	1.4e-20	ABC transporter transmembrane region
ABC_tran	PF00005	632 - 765	2.3e-16	ABC transporter
ABC_membrane	PF00664	910 - 1158	6.2e-43	ABC transporter transmembrane region
ABC_tran	PF00005	1249 - 1394	2.3e-24	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002799)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07680 AT2G07680 AT2G07680 AT2G07680 AT2G07680 AT2G07680
fragaria_vesca	FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590 FvH4_6g28590
malus_domestica	MD09G1225000.v1.1
prunus_persica	Prupe.3G098500_v2.0.a1 Prupe.3G098500_v2.0.a1 Prupe.3G098500_v2.0.a1 Prupe.3G098500_v2.0.a1
pyrus_communis	pycom09g14470 pycom09g14480 pycom09g14490
rosa_chinensis	RchiOBHm_Chr2g0132931
rosa_laevigata	RLG00000019292
rosa_multiflora	Rmu_sc0001314.1_g000005
rosa_roxburghii	Rroxscaffold_2G00111610
rosa_rugosa	Rorug02G0308600
rosa_samantha	Rh2AG360900 Rh2BG366800 Rh2CG344200 Rh2DG383800
rosa_wichuraiana	Rw2G029350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2262
AatII	GACGTC	1 cut(s)	507
AbsI	CCTCGAGG	1 cut(s)	602
Acc36I	ACCTGC	2 cut(s)	1713, 3766
AccB1I	GGYRCC	1 cut(s)	4026
AccI	GTMKAC	3 cut(s)	1253, 2685, 3203
AccII	CGCG	2 cut(s)	2082, 2656
AciI	CCGC	6 cut(s)	1414, 2080, 2656, 2919, 3835, 4340
AclI	AACGTT	1 cut(s)	2394
AcoI	YGGCCR	4 cut(s)	848, 1158, 3324, 3671
AcuI	CTGAAG	4 cut(s)	2604, 3015, 3170, 3392
AcvI	CACGTG	2 cut(s)	205, 4133
AcyI	GRCGYC	1 cut(s)	504
AdeI	CACNNNGTG	2 cut(s)	3005, 3743
AfaI	GTAC	8 cut(s)	135, 490, 879, 1508, 1567, 2046, 2869, 3493
AfiI	CCNNNNNNNGG	6 cut(s)	45, 218, 823, 1989, 3502, 3680
AflII	CTTAAG	2 cut(s)	476, 1186
AflIII	ACRYGT	1 cut(s)	2443
AgeI	ACCGGT	1 cut(s)	2708
AhdI	GACNNNNNGTC	1 cut(s)	3235
AjnI	CCWGG	7 cut(s)	167, 1517, 1856, 3001, 3339, 3496, 4320
AjuI	GAANNNNNNNTTGG	8 cut(s)	1540, 1572, 1970, 2002, 2574, 2606, 3173, 3205
AleI	CACNNNNGTG	1 cut(s)	677
Alw21I	GWGCWC	4 cut(s)	1443, 2236, 3610, 4138
Alw26I	GTCTC	4 cut(s)	1460, 3243, 3249, 3263
Alw44I	GTGCAC	1 cut(s)	4134
AlwNI	CAGNNNCTG	1 cut(s)	3803
Ama87I	CYCGRG	2 cut(s)	602, 3210
AoxI	GGCC	8 cut(s)	848, 988, 1158, 1536, 2898, 3097, 3324, 3671
ApaLI	GTGCAC	1 cut(s)	4134
ApeKI	GCWGC	9 cut(s)	703, 1607, 2558, 2930, 3419, 3527, 3734, 4052, 4114
ArsI	GACNNNNNNTTYG	2 cut(s)	494, 526
AseI	ATTAAT	2 cut(s)	1304, 1680
AsiGI	ACCGGT	1 cut(s)	2708
Asp700I	GAANNNNTTC	1 cut(s)	99
AspLEI	GCGC	3 cut(s)	1746, 2303, 2656
AsuHPI	GGTGA	4 cut(s)	1773, 2192, 3355, 4064
AvaI	CYCGRG	2 cut(s)	602, 3210
AvaII	GGWCC	7 cut(s)	153, 598, 745, 905, 2053, 2351, 2459
BaeGI	GKGCMC	1 cut(s)	4138
BaeI	ACNNNNGTAYC	4 cut(s)	2409, 2442, 4300, 4333
BalI	TGGCCA	4 cut(s)	850, 1160, 3326, 3673
BamHI	GGATCC	1 cut(s)	3976
BanI	GGYRCC	1 cut(s)	4026
BanII	GRGCYC	3 cut(s)	1443, 2236, 3610
BarI	GAAGNNNNNNTAC	2 cut(s)	564, 596
BauI	CACGAG	1 cut(s)	2373
BbrPI	CACGTG	2 cut(s)	205, 4133
BbsI	GAAGAC	4 cut(s)	1609, 2635, 3130, 3398
Bbv12I	GWGCWC	4 cut(s)	1443, 2236, 3610, 4138
BbvCI	CCTCAGC	1 cut(s)	2297
BbvI	GCAGC	9 cut(s)	715, 1594, 2545, 2917, 3431, 3539, 3721, 4064, 4126
BceAI	ACGGC	3 cut(s)	200, 2202, 4127
BcgI	CGANNNNNNTGC	2 cut(s)	2744, 2778
BciT130I	CCWGG	7 cut(s)	169, 1519, 1858, 3003, 3341, 3498, 4322
BciVI	GTATCC	4 cut(s)	1012, 2819, 3006, 4328
BclI	TGATCA	2 cut(s)	1798, 2992
BcoDI	GTCTC	4 cut(s)	1460, 3243, 3249, 3263
BfaI	CTAG	7 cut(s)	1068, 1112, 1910, 3083, 3813, 4086, 4227
BfmI	CTRYAG	6 cut(s)	1347, 2034, 2559, 2931, 3196, 4101
BfrI	CTTAAG	2 cut(s)	476, 1186
BfuAI	ACCTGC	2 cut(s)	1713, 3766
BfuI	GTATCC	4 cut(s)	1012, 2819, 3006, 4328
BglII	AGATCT	1 cut(s)	3034
BisI	GCNGC	9 cut(s)	704, 1608, 2559, 2931, 3420, 3528, 3735, 4053, 4115
BlsI	GCNGC	9 cut(s)	705, 1609, 2560, 2932, 3421, 3529, 3736, 4054, 4116
BmcAI	AGTACT	1 cut(s)	1508
Bme1390I	CCNGG	7 cut(s)	169, 1519, 1858, 3003, 3341, 3498, 4322
Bme18I	GGWCC	7 cut(s)	153, 598, 745, 905, 2053, 2351, 2459
BmeRI	GACNNNNNGTC	1 cut(s)	3235
BmeT110I	CYCGRG	2 cut(s)	602, 3210
BmrFI	CCNGG	7 cut(s)	169, 1519, 1858, 3003, 3341, 3498, 4322
BmrI	ACTGGG	2 cut(s)	310, 3557
BmuI	ACTGGG	2 cut(s)	310, 3557
BoxI	GACNNNNGTC	1 cut(s)	335
BpiI	GAAGAC	4 cut(s)	1609, 2635, 3130, 3398
BpmI	CTGGAG	2 cut(s)	190, 4351
Bpu10I	CCTNAGC	2 cut(s)	2297, 4076
BpuEI	CTTGAG	5 cut(s)	334, 602, 3615, 3632, 3730
BsaAI	YACGTR	2 cut(s)	205, 4133
BsaBI	GATNNNNATC	1 cut(s)	1170
BsaHI	GRCGYC	1 cut(s)	504
BsaI	GGTCTC	1 cut(s)	3249
BsaJI	CCNNGG	6 cut(s)	1670, 2008, 2057, 3496, 3497, 4312
BsaWI	WCCGGW	2 cut(s)	2708, 3532
BsaXI	ACNNNNNCTCC	2 cut(s)	1430, 1460
Bsc4I	CCNNNNNNNGG	6 cut(s)	45, 218, 823, 1989, 3502, 3680
Bse118I	RCCGGY	2 cut(s)	155, 2708
Bse1I	ACTGG	5 cut(s)	316, 1310, 1460, 3552, 4377
Bse3DI	GCAATG	3 cut(s)	243, 1932, 2557
Bse8I	GATNNNNATC	1 cut(s)	1170
BseBI	CCWGG	7 cut(s)	169, 1519, 1858, 3003, 3341, 3498, 4322
BseDI	CCNNGG	6 cut(s)	1670, 2008, 2057, 3496, 3497, 4312
BseJI	GATNNNNATC	1 cut(s)	1170
BseLI	CCNNNNNNNGG	6 cut(s)	45, 218, 823, 1989, 3502, 3680
BseMI	GCAATG	3 cut(s)	243, 1932, 2557
BseMII	CTCAG	6 cut(s)	1125, 1731, 2311, 3300, 3947, 3980
BseNI	ACTGG	5 cut(s)	316, 1310, 1460, 3552, 4377
BseRI	GAGGAG	1 cut(s)	1644
BseSI	GKGCMC	1 cut(s)	4138
BseXI	GCAGC	9 cut(s)	715, 1594, 2545, 2917, 3431, 3539, 3721, 4064, 4126
BsgI	GTGCAG	1 cut(s)	3720
Bsh1236I	CGCG	2 cut(s)	2082, 2656
BshFI	GGCC	8 cut(s)	850, 990, 1160, 1538, 2900, 3099, 3326, 3673
BshNI	GGYRCC	1 cut(s)	4026
BshTI	ACCGGT	1 cut(s)	2708
BsiHKAI	GWGCWC	4 cut(s)	1443, 2236, 3610, 4138
BsiHKCI	CYCGRG	2 cut(s)	602, 3210
BsiSI	CCGG	4 cut(s)	156, 903, 2709, 3533
BslFI	GGGAC	4 cut(s)	62, 2039, 2472, 3980
BslI	CCNNNNNNNGG	6 cut(s)	45, 218, 823, 1989, 3502, 3680
BsmAI	GTCTC	4 cut(s)	1460, 3243, 3249, 3263
BsmFI	GGGAC	4 cut(s)	62, 2039, 2472, 3980
BsmI	GAATGC	5 cut(s)	2495, 3299, 3829, 4178, 4238
BsnI	GGCC	8 cut(s)	850, 990, 1160, 1538, 2900, 3099, 3326, 3673
Bso31I	GGTCTC	1 cut(s)	3249
BsoBI	CYCGRG	2 cut(s)	602, 3210
Bsp1286I	GDGCHC	4 cut(s)	1443, 2236, 3610, 4138
Bsp1407I	TGTACA	1 cut(s)	1565
Bsp19I	CCATGG	3 cut(s)	2008, 2057, 4312
BspACI	CCGC	6 cut(s)	1414, 2080, 2656, 2919, 3835, 4340
BspANI	GGCC	8 cut(s)	850, 990, 1160, 1538, 2900, 3099, 3326, 3673
BspCNI	CTCAG	6 cut(s)	1126, 1732, 2310, 3301, 3946, 3981
BspFNI	CGCG	2 cut(s)	2082, 2656
BspHI	TCATGA	2 cut(s)	760, 1074
BspMAI	CTGCAG	2 cut(s)	2563, 2935
BspMI	ACCTGC	2 cut(s)	1713, 3766
BspT107I	GGYRCC	1 cut(s)	4026
BspTI	CTTAAG	2 cut(s)	476, 1186
BspTNI	GGTCTC	1 cut(s)	3249
BsrDI	GCAATG	3 cut(s)	243, 1932, 2557
BsrFI	RCCGGY	2 cut(s)	155, 2708
BsrGI	TGTACA	1 cut(s)	1565
BsrI	ACTGG	5 cut(s)	316, 1310, 1460, 3552, 4377
BssAI	RCCGGY	2 cut(s)	155, 2708
BssECI	CCNNGG	6 cut(s)	1670, 2008, 2057, 3496, 3497, 4312
BssNAI	GTATAC	1 cut(s)	1254
BssNI	GRCGYC	1 cut(s)	504
BssSI	CACGAG	1 cut(s)	2373
BssT1I	CCWWGG	3 cut(s)	2008, 2057, 4312
Bst1107I	GTATAC	1 cut(s)	1254
Bst2BI	CACGAG	1 cut(s)	2373
Bst2UI	CCWGG	7 cut(s)	169, 1519, 1858, 3003, 3341, 3498, 4322
Bst6I	CTCTTC	3 cut(s)	350, 536, 3063
BstACI	GRCGYC	1 cut(s)	504
BstAFI	CTTAAG	2 cut(s)	476, 1186
BstAPI	GCANNNNNTGC	2 cut(s)	2309, 2318
BstAUI	TGTACA	1 cut(s)	1565
BstBAI	YACGTR	2 cut(s)	205, 4133
BstC8I	GCNNGC	8 cut(s)	367, 1217, 1287, 2387, 2478, 2616, 2757, 4344
BstDEI	CTNAG	8 cut(s)	1134, 1740, 2297, 2596, 3309, 3933, 3989, 4076
BstDSI	CCRYGG	4 cut(s)	1670, 2008, 2057, 4312
BstFNI	CGCG	2 cut(s)	2082, 2656
BstHHI	GCGC	3 cut(s)	1746, 2303, 2656
BstMAI	GTCTC	4 cut(s)	1460, 3243, 3249, 3263
BstNI	CCWGG	7 cut(s)	169, 1519, 1858, 3003, 3341, 3498, 4322
BstNSI	RCATGY	1 cut(s)	2447
BstPAI	GACNNNNGTC	1 cut(s)	335
BstSCI	CCNGG	7 cut(s)	167, 1517, 1856, 3001, 3339, 3496, 4320
BstSFI	CTRYAG	6 cut(s)	1347, 2034, 2559, 2931, 3196, 4101
BstSLI	GKGCMC	1 cut(s)	4138
BstUI	CGCG	2 cut(s)	2082, 2656
BstV1I	GCAGC	9 cut(s)	715, 1594, 2545, 2917, 3431, 3539, 3721, 4064, 4126
BstV2I	GAAGAC	4 cut(s)	1609, 2635, 3130, 3398
BstX2I	RGATCY	5 cut(s)	2030, 3034, 3461, 3904, 3976
BstXI	CCANNNNNNTGG	2 cut(s)	377, 742
BstYI	RGATCY	5 cut(s)	2030, 3034, 3461, 3904, 3976
BstZ17I	GTATAC	1 cut(s)	1254
BsuI	GTATCC	4 cut(s)	1012, 2819, 3006, 4328
BsuRI	GGCC	8 cut(s)	850, 990, 1160, 1538, 2900, 3099, 3326, 3673
BtgI	CCRYGG	4 cut(s)	1670, 2008, 2057, 4312
BtgZI	GCGATG	1 cut(s)	1282
BtsI	GCAGTG	4 cut(s)	1873, 2951, 4136, 4243
BveI	ACCTGC	2 cut(s)	1713, 3766
Cac8I	GCNNGC	8 cut(s)	367, 1217, 1287, 2387, 2478, 2616, 2757, 4344
CaiI	CAGNNNCTG	1 cut(s)	3803
CciI	TCATGA	2 cut(s)	760, 1074
CfoI	GCGC	3 cut(s)	1746, 2303, 2656
Cfr10I	RCCGGY	2 cut(s)	155, 2708
CpoI	CGGWCCG	1 cut(s)	905
CseI	GACGC	1 cut(s)	4199
CsiI	ACCWGGT	2 cut(s)	3001, 3339
Csp6I	GTAC	8 cut(s)	134, 489, 878, 1507, 1566, 2045, 2868, 3492
CspAI	ACCGGT	1 cut(s)	2708
CspI	CGGWCCG	1 cut(s)	905
CviQI	GTAC	8 cut(s)	134, 489, 878, 1507, 1566, 2045, 2868, 3492
DdeI	CTNAG	8 cut(s)	1134, 1740, 2297, 2596, 3309, 3933, 3989, 4076
DraI	TTTAAA	3 cut(s)	258, 1006, 3660
DraIII	CACNNNGTG	2 cut(s)	3005, 3743
DriI	GACNNNNNGTC	1 cut(s)	3235
EaeI	YGGCCR	4 cut(s)	848, 1158, 3324, 3671
Eam1104I	CTCTTC	3 cut(s)	350, 536, 3063
Eam1105I	GACNNNNNGTC	1 cut(s)	3235
EarI	CTCTTC	3 cut(s)	350, 536, 3063
EciI	GGCGGA	1 cut(s)	3824
Ecl136II	GAGCTC	3 cut(s)	1441, 2234, 3608
Eco130I	CCWWGG	3 cut(s)	2008, 2057, 4312
Eco24I	GRGCYC	3 cut(s)	1443, 2236, 3610
Eco31I	GGTCTC	1 cut(s)	3249
Eco32I	GATATC	2 cut(s)	1326, 1650
Eco47I	GGWCC	7 cut(s)	153, 598, 745, 905, 2053, 2351, 2459
Eco53kI	GAGCTC	3 cut(s)	1441, 2234, 3608
Eco57I	CTGAAG	4 cut(s)	2604, 3015, 3170, 3392
Eco72I	CACGTG	2 cut(s)	205, 4133
Eco88I	CYCGRG	2 cut(s)	602, 3210
EcoICRI	GAGCTC	3 cut(s)	1441, 2234, 3608
EcoO109I	RGGNCCY	3 cut(s)	2053, 2459, 2898
EcoRI	GAATTC	2 cut(s)	1978, 3692
EcoRII	CCWGG	7 cut(s)	167, 1517, 1856, 3001, 3339, 3496, 4320
EcoRV	GATATC	2 cut(s)	1326, 1650
EcoT14I	CCWWGG	3 cut(s)	2008, 2057, 4312
EcoT22I	ATGCAT	1 cut(s)	769
EcoT38I	GRGCYC	3 cut(s)	1443, 2236, 3610
ErhI	CCWWGG	3 cut(s)	2008, 2057, 4312
FalI	AAGNNNNNCTT	6 cut(s)	708, 740, 1913, 1945, 2661, 2693
FaqI	GGGAC	4 cut(s)	62, 2039, 2472, 3980
FauI	CCCGC	1 cut(s)	2912
FauNDI	CATATG	4 cut(s)	841, 2041, 2914, 3127
FbaI	TGATCA	2 cut(s)	1798, 2992
FblI	GTMKAC	3 cut(s)	1253, 2685, 3203
Fnu4HI	GCNGC	9 cut(s)	704, 1608, 2559, 2931, 3420, 3528, 3735, 4053, 4115
FriOI	GRGCYC	3 cut(s)	1443, 2236, 3610
Fsp4HI	GCNGC	9 cut(s)	704, 1608, 2559, 2931, 3420, 3528, 3735, 4053, 4115
FspBI	CTAG	7 cut(s)	1068, 1112, 1910, 3083, 3813, 4086, 4227
GlaI	GCGC	3 cut(s)	1745, 2302, 2655
GluI	GCNGC	9 cut(s)	704, 1608, 2559, 2931, 3420, 3528, 3735, 4053, 4115
GsuI	CTGGAG	2 cut(s)	190, 4351
HaeIII	GGCC	8 cut(s)	850, 990, 1160, 1538, 2900, 3099, 3326, 3673
HapII	CCGG	4 cut(s)	156, 903, 2709, 3533
HgaI	GACGC	1 cut(s)	4199
HhaI	GCGC	3 cut(s)	1746, 2303, 2656
Hin1I	GRCGYC	1 cut(s)	504
Hin6I	GCGC	3 cut(s)	1744, 2301, 2654
HinP1I	GCGC	3 cut(s)	1744, 2301, 2654
HincII	GTYRAC	4 cut(s)	1108, 1183, 2212, 3204
HindII	GTYRAC	4 cut(s)	1108, 1183, 2212, 3204
HindIII	AAGCTT	2 cut(s)	2757, 3553
HpaII	CCGG	4 cut(s)	156, 903, 2709, 3533
HphI	GGTGA	4 cut(s)	1773, 2192, 3355, 4064
Hpy99I	CGWCG	1 cut(s)	221
HpyCH4IV	ACGT	8 cut(s)	204, 504, 855, 2154, 2394, 2702, 3403, 4132
HpyF3I	CTNAG	8 cut(s)	1134, 1740, 2297, 2596, 3309, 3933, 3989, 4076
HpySE526I	ACGT	8 cut(s)	204, 504, 855, 2154, 2394, 2702, 3403, 4132
Hsp92I	GRCGYC	1 cut(s)	504
HspAI	GCGC	3 cut(s)	1744, 2301, 2654
Ksp22I	TGATCA	2 cut(s)	1798, 2992
LmnI	GCTCC	8 cut(s)	221, 1212, 1438, 1446, 2273, 3535, 3800, 3898
Lsp1109I	GCAGC	9 cut(s)	715, 1594, 2545, 2917, 3431, 3539, 3721, 4064, 4126
MabI	ACCWGGT	2 cut(s)	3001, 3339
MaeI	CTAG	7 cut(s)	1068, 1112, 1910, 3083, 3813, 4086, 4227
MaeII	ACGT	8 cut(s)	204, 504, 855, 2154, 2394, 2702, 3403, 4132
MaeIII	GTNAC	7 cut(s)	694, 1190, 1868, 1903, 2180, 2922, 3703
MfeI	CAATTG	4 cut(s)	2421, 3045, 3667, 4257
MflI	RGATCY	5 cut(s)	2030, 3034, 3461, 3904, 3976
MhlI	GDGCHC	4 cut(s)	1443, 2236, 3610, 4138
MlsI	TGGCCA	4 cut(s)	850, 1160, 3326, 3673
MluNI	TGGCCA	4 cut(s)	850, 1160, 3326, 3673
MlyI	GAGTC	4 cut(s)	617, 694, 2217, 3931
MmeI	TCCRAC	5 cut(s)	199, 579, 761, 2155, 3769
Mox20I	TGGCCA	4 cut(s)	850, 1160, 3326, 3673
Mph1103I	ATGCAT	1 cut(s)	769
MroXI	GAANNNNTTC	1 cut(s)	99
MscI	TGGCCA	4 cut(s)	850, 1160, 3326, 3673
MslI	CAYNNNNRTG	7 cut(s)	536, 677, 740, 844, 1586, 1669, 3847
Msp20I	TGGCCA	4 cut(s)	850, 1160, 3326, 3673
MspA1I	CMGCKG	2 cut(s)	1769, 3734
MspCI	CTTAAG	2 cut(s)	476, 1186
MspI	CCGG	4 cut(s)	156, 903, 2709, 3533
MspR9I	CCNGG	7 cut(s)	169, 1519, 1858, 3003, 3341, 3498, 4322
MunI	CAATTG	4 cut(s)	2421, 3045, 3667, 4257
Mva1269I	GAATGC	5 cut(s)	2495, 3299, 3829, 4178, 4238
MvaI	CCWGG	7 cut(s)	169, 1519, 1858, 3003, 3341, 3498, 4322
MvnI	CGCG	2 cut(s)	2082, 2656
NcoI	CCATGG	3 cut(s)	2008, 2057, 4312
NdeI	CATATG	4 cut(s)	841, 2041, 2914, 3127
NmuCI	GTSAC	3 cut(s)	694, 1868, 2180
NsiI	ATGCAT	1 cut(s)	769
NspI	RCATGY	1 cut(s)	2447
OliI	CACNNNNGTG	1 cut(s)	677
PaeR7I	CTCGAG	2 cut(s)	602, 3210
PagI	TCATGA	2 cut(s)	760, 1074
PasI	CCCWGGG	1 cut(s)	3497
PciI	ACATGT	1 cut(s)	2443
PcsI	WCGNNNNNNNCGW	1 cut(s)	3217
PctI	GAATGC	5 cut(s)	2495, 3299, 3829, 4178, 4238
PdmI	GAANNNNTTC	1 cut(s)	99
PinAI	ACCGGT	1 cut(s)	2708
PkrI	GCNGC	9 cut(s)	705, 1609, 2560, 2932, 3421, 3529, 3736, 4054, 4116
PleI	GAGTC	4 cut(s)	617, 693, 2216, 3931
PmaCI	CACGTG	2 cut(s)	205, 4133
PmlI	CACGTG	2 cut(s)	205, 4133
PpsI	GAGTC	4 cut(s)	617, 693, 2216, 3931
Ppu21I	YACGTR	2 cut(s)	205, 4133
PpuMI	RGGWCCY	2 cut(s)	2053, 2459
PscI	ACATGT	1 cut(s)	2443
PshAI	GACNNNNGTC	1 cut(s)	335
PshBI	ATTAAT	2 cut(s)	1304, 1680
PsiI	TTATAA	1 cut(s)	2262
Psp124BI	GAGCTC	3 cut(s)	1443, 2236, 3610
Psp1406I	AACGTT	1 cut(s)	2394
Psp5II	RGGWCCY	2 cut(s)	2053, 2459
Psp6I	CCWGG	7 cut(s)	167, 1517, 1856, 3001, 3339, 3496, 4320
PspCI	CACGTG	2 cut(s)	205, 4133
PspGI	CCWGG	7 cut(s)	167, 1517, 1856, 3001, 3339, 3496, 4320
PspPPI	RGGWCCY	2 cut(s)	2053, 2459
PspXI	VCTCGAGB	1 cut(s)	602
PstI	CTGCAG	2 cut(s)	2563, 2935
PstNI	CAGNNNCTG	1 cut(s)	3803
PsuI	RGATCY	5 cut(s)	2030, 3034, 3461, 3904, 3976
PvuII	CAGCTG	2 cut(s)	1769, 3734
RsaI	GTAC	8 cut(s)	135, 490, 879, 1508, 1567, 2046, 2869, 3493
RsaNI	GTAC	8 cut(s)	134, 489, 878, 1507, 1566, 2045, 2868, 3492
RseI	CAYNNNNRTG	7 cut(s)	536, 677, 740, 844, 1586, 1669, 3847
Rsr2I	CGGWCCG	1 cut(s)	905
RsrII	CGGWCCG	1 cut(s)	905
SacI	GAGCTC	3 cut(s)	1443, 2236, 3610
SalI	GTCGAC	1 cut(s)	3202
SatI	GCNGC	9 cut(s)	704, 1608, 2559, 2931, 3420, 3528, 3735, 4053, 4115
ScaI	AGTACT	1 cut(s)	1508
SchI	GAGTC	4 cut(s)	617, 694, 2217, 3931
ScrFI	CCNGG	7 cut(s)	169, 1519, 1858, 3003, 3341, 3498, 4322
SduI	GDGCHC	4 cut(s)	1443, 2236, 3610, 4138
SexAI	ACCWGGT	2 cut(s)	3001, 3339
SfcI	CTRYAG	6 cut(s)	1347, 2034, 2559, 2931, 3196, 4101
Sfr274I	CTCGAG	2 cut(s)	602, 3210
SinI	GGWCC	7 cut(s)	153, 598, 745, 905, 2053, 2351, 2459
SlaI	CTCGAG	2 cut(s)	602, 3210
SmiMI	CAYNNNNRTG	7 cut(s)	536, 677, 740, 844, 1586, 1669, 3847
SmlI	CTYRAG	9 cut(s)	349, 476, 602, 617, 1186, 3210, 3611, 3630, 3709
SmoI	CTYRAG	9 cut(s)	349, 476, 602, 617, 1186, 3210, 3611, 3630, 3709
SsiI	CCGC	6 cut(s)	1414, 2080, 2656, 2919, 3835, 4340
SspI	AATATT	1 cut(s)	2733
SspMI	CTAG	7 cut(s)	1068, 1112, 1910, 3083, 3813, 4086, 4227
SstI	GAGCTC	3 cut(s)	1443, 2236, 3610
StyD4I	CCNGG	7 cut(s)	167, 1517, 1856, 3001, 3339, 3496, 4320
StyI	CCWWGG	3 cut(s)	2008, 2057, 4312
TaiI	ACGT	8 cut(s)	207, 507, 858, 2157, 2397, 2705, 3406, 4135
TaqI	TCGA	7 cut(s)	148, 240, 603, 2236, 3203, 3211, 4308
TaqII	GACCGA	1 cut(s)	3231
TatI	WGTACW	4 cut(s)	488, 1506, 1565, 2867
TseFI	GTSAC	3 cut(s)	694, 1868, 2180
TseI	GCWGC	9 cut(s)	703, 1607, 2558, 2930, 3419, 3527, 3734, 4052, 4114
Tsp45I	GTSAC	3 cut(s)	694, 1868, 2180
TspGWI	ACGGA	6 cut(s)	31, 66, 1516, 1659, 3700, 3780
Vha464I	CTTAAG	2 cut(s)	476, 1186
VneI	GTGCAC	1 cut(s)	4134
VpaK11BI	GGWCC	7 cut(s)	153, 598, 745, 905, 2053, 2351, 2459
VspI	ATTAAT	2 cut(s)	1304, 1680
XceI	RCATGY	1 cut(s)	2447
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1317, 2055
XhoI	CTCGAG	2 cut(s)	602, 3210
XmiI	GTMKAC	3 cut(s)	1253, 2685, 3203
XmnI	GAANNNNTTC	1 cut(s)	99
XspI	CTAG	7 cut(s)	1068, 1112, 1910, 3083, 3813, 4086, 4227
ZraI	GACGTC	1 cut(s)	505
ZrmI	AGTACT	1 cut(s)	1508
Zsp2I	ATGCAT	1 cut(s)	769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.