Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005265

Physical Location & Seq

Genomic Coordinates Reverse (-)

53083096 .. 53088671

Gene Structure 5576 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGGGTGACGCCGAGCATTGGCTACATGGGACGCTTCATGCTACGATCTATGAGGTTGATAAGCTGCACAGTAGCAGTGGAAATTTCCTCCGCAAGATCACTGGAAAACTTGAAGAGACTGTTGGTATTGGCAAAGGAATGAGTAAACTGTATGCAACTGTTGATCTGGAAAGGGCTAGGGTTGGTCGCACCAGAGTTGTAGGAGAACCCTCCAATCCCAAGTGGTTTGAGTCTTTCCACATTTATTGTGCTCATGTCGCTGCAAATGTTATATTCACTGTCAAGGAGTCTAATCCTATTGGAGCATCATTAATTGGTAGAGCGTATGTACCTGTTGAACAACTTTTTGAAGGGGAAGAAGTGGATACATGGGCTGAAATTTTGGATGAGAAAAAAGAACCTGTTCATGGCAGTCCCAAGATACATGTGAAGCTGCAATTTTTTCATGTTTCAAAGGACCGCAGCTGGAGTCAAGGTATTAAGAGTCCTAAATTTCCTGGAGTTCCATTTACCTTTTTCTCACAGAGACAAGGATGTAAGGTTACACTGTACCAAGATGCTCATGTCCCAGATAACTTTATTCCTAAAATTCCTCTTGCTGGAGGCAAGAATTATGAGCCCCACAGATGTTGGGAAGATATCTTTGATGCAATTACTAATGCAAAACACCTGATCTACATCACTGGGTGGTCAGTTTATACTGAAATTTCCTTGGTAAGGGACTCAAGGAGGTCAAAACCTGGTGGCGATATCACTATTGGTGAGTTACTTAAAAAGAAAGCAAGTGAAGGTGTCCGTGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTTCCTTTATTAAAAAAAGATGGAATGATGGCCACCCATGATGAGGCAACTGCACAGTATTTCCAGAACACTGACGTGAACTGTGTCTTATGCCCCCGTAACCCAGATGGTGGTGGAAGCATTAAGATTGTGGTTGTGGACAGTGAAATGCCAACTAGAGGATCACAGAGTAGAAGAATTGTGAGTTTTGTTGGGGGTATTGATCTGTGTGATGGAAGATATGATACCCAATTCCATTCACTTTTCAGGACATTGGATACTGCACATCATGACGATTTCCATCAGCCAAATTTTACTGGTGCATCGATTACAAAAGGTGGTCCAAGAGAACCTTGGCATGATATTCACTCTCGGCTGGAAGGGCCTATTGCTTGGGATGTGTTGTTCAACTTTGAGCAGAGATGGAGAAAGCAAGGTGGTAAAGATGTACTTGTTCAGCTCAGAGAGCTTGACAATGTCATTATTCCACCATCTCCTGTTATGTTCCCAGATGACCATGAGACATGGAATGTTCAGTTATTCAGATCAATTGATGGAGGAGCTGCTTTTGGCTTCCCGGATACGCCTGAAGATGCAGCCAGAGCTGGGCTTGTTAGTGGGAAGGATAACATCATTGATCGAAGCATTCAGGATGCTTATATCCATGCTATTCGCCGTGCAAAGAACTTCATATATATTGAGAATCAGTATTTTCTTGGTAGCTCTTTTGCCTGGGCAGCTGATGGTATAAAGCCCGAAGACATTGGTGCTTTGCATGTAATTCCTAGGGAGCTTTCGCTTAAGATTGCTGACAAGATTGCGAATGGGGAGAGGTTTACTGTCTATGTTGTTGTCCCAATGTGGCCAGAGGGAATCCCGGAGTCTGGACCAGTTCAGGCAATATTAGATTGGCAGAGGAGGACAATGCAAATGATGTACACAGATATTAAGCAGGCACTTGATAAAAACGGTGTTGAGGAGGATCCAAGGAACTATTTGACATTTTTCTGCCTTGGGAATCGGGAGGTGAAGAAGGATGGAGAATATGAACCCACCGAGCGACCAGAGGCAGATTCGGATTATATTAGAGCTCAGGAATCCCGACGCTTCATGATTTATGTTCATACCAAGATGATGATAGTTGACGACGAATACATCATCATTGGATCTGCCAACATCAACCAGAGATCAATGGATGGTGCCAGGGACTCTGAAATAGCCATGGGAGCCTTCCAACCATATCATCTATCAGTCAGGGAGCCAGCACGTGGTCAGATTCATGGTTTCCGTATGGCATTGTGGTACGAGCACCTTGGCATGCTTGATGAATCCTTCCTCCAGCCAGAAAGCATTGAATGTATCACAAAGGTTAACCAGATTGCTGAAAAATACTGGGACCTCTATTCAAGTGAAACACTGGAACGTGATTTGCCGGGTCACCTGCTTCGCTATCCTGTTGGAGTTACCAGCGAAGGAGAAGTCACGGAGTTGCCCGGATTTGAATTCTTCCCTGACACCAAGGCTCGAGTGCTAGGTGCCAAATCAGACTATCTTCCTCCCATCATTACTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0009536 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

794

Amino Acids

89.93

Weight (kDa)

5.69

Isoelectric Point (pI)

36.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	45 - 126	7.3e-09	C2 domain
PLDc_2	PF13091	640 - 673	3.3e-06	PLD-like domain
PLDc	PF00614	642 - 667	2.9e-08	Phospholipase D Active site motif
PLD_C	PF12357	712 - 784	5.1e-30	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005265)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52570 AT1G52570 AT1G52570 AT3G15730
fragaria_vesca	FvH4_6g29920 FvH4_6g29920 FvH4_6g29920 FvH4_6g29920 FvH4_6g29920 FvH4_6g29920
malus_domestica	MD00G1090900.v1.1 MD17G1209200.v1.1
prunus_persica	Prupe.3G084800_v2.0.a1 Prupe.3G084800_v2.0.a1 Prupe.3G084800_v2.0.a1
pyrus_communis	pycom09g14080
rosa_chinensis	RchiOBHm_Chr2g0135901
rosa_laevigata	RLG00000019489
rosa_multiflora	Rmu_sc0001825.1_g000006 Rmu_sc0007848.1_g000004
rosa_roxburghii	Rroxscaffold_2G00108790
rosa_rugosa	Rorug02G0326700 Rorug02G0326700 Rorug02G0326700
rosa_samantha	Rh2AG378300 Rh2BG384800 Rh2CG364100 Rh2DG401200
rosa_wichuraiana	Rw2G030820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2259
Acc36I	ACCTGC	1 cut(s)	2259
AccB1I	GGYRCC	2 cut(s)	2009, 2345
AccB7I	CCANNNNNTGG	2 cut(s)	941, 2078
AciI	CCGC	2 cut(s)	91, 460
AclWI	GGATC	4 cut(s)	1000, 1787, 1800, 1984
AcoI	YGGCCR	2 cut(s)	861, 1673
AcsI	RAATTY	7 cut(s)	82, 378, 491, 588, 705, 1120, 2312
AcuI	CTGAAG	1 cut(s)	1419
AcvI	CACGTG	1 cut(s)	2078
AcyI	GRCGYC	1 cut(s)	9
AdeI	CACNNNGTG	1 cut(s)	687
AfaI	GTAC	5 cut(s)	330, 551, 1260, 1748, 2114
AflII	CTTAAG	1 cut(s)	1610
AflIII	ACRYGT	1 cut(s)	424
AgsI	TTSAA	8 cut(s)	113, 338, 350, 453, 1219, 2165, 2217, 2312
AjiI	CACGTC	1 cut(s)	907
AjnI	CCWGG	4 cut(s)	496, 739, 1541, 2012
AjuI	GAANNNNNNNTTGG	2 cut(s)	105, 137
AleI	CACNNNNGTG	1 cut(s)	905
AloI	GAACNNNNNNTCC	4 cut(s)	817, 849, 1199, 1231
Alw21I	GWGCWC	3 cut(s)	253, 1903, 2121
Alw26I	GTCTC	3 cut(s)	110, 520, 1325
AlwI	GGATC	4 cut(s)	1000, 1787, 1800, 1984
Ama87I	CYCGRG	1 cut(s)	2334
AoxI	GGCC	3 cut(s)	861, 1193, 1673
ApeKI	GCWGC	7 cut(s)	64, 260, 433, 462, 1373, 1406, 1547
ApoI	RAATTY	7 cut(s)	82, 378, 491, 588, 705, 1120, 2312
ArsI	GACNNNNNNTTYG	2 cut(s)	2274, 2306
AseI	ATTAAT	1 cut(s)	311
Asp700I	GAANNNNTTC	1 cut(s)	402
AspA2I	CCTAGG	1 cut(s)	1595
AspS9I	GGNCC	5 cut(s)	457, 1151, 1193, 1697, 2206
AsuC2I	CCSGG	4 cut(s)	1388, 1688, 2244, 2304
AsuHPI	GGTGA	4 cut(s)	17, 773, 1849, 2240
AvaI	CYCGRG	1 cut(s)	2334
AvaII	GGWCC	4 cut(s)	457, 1151, 1697, 2206
AvrII	CCTAGG	1 cut(s)	1595
BalI	TGGCCA	2 cut(s)	863, 1675
BamHI	GGATCC	1 cut(s)	1792
BanI	GGYRCC	2 cut(s)	2009, 2345
BanII	GRGCYC	2 cut(s)	621, 1903
BarI	GAAGNNNNNNTAC	2 cut(s)	1039, 1071
BbrPI	CACGTG	1 cut(s)	2078
BbsI	GAAGAC	1 cut(s)	1575
Bbv12I	GWGCWC	3 cut(s)	253, 1903, 2121
BbvI	GCAGC	7 cut(s)	51, 247, 420, 474, 1360, 1418, 1559
BceAI	ACGGC	1 cut(s)	1470
BciT130I	CCWGG	4 cut(s)	498, 741, 1543, 2014
BciVI	GTATCC	3 cut(s)	358, 1081, 1384
BcnI	CCSGG	4 cut(s)	1388, 1688, 2244, 2304
BcoDI	GTCTC	3 cut(s)	110, 520, 1325
BfaI	CTAG	4 cut(s)	177, 987, 1596, 2342
BfrI	CTTAAG	1 cut(s)	1610
BfuAI	ACCTGC	1 cut(s)	2259
BfuI	GTATCC	3 cut(s)	358, 1081, 1384
BisI	GCNGC	7 cut(s)	65, 261, 434, 463, 1374, 1407, 1548
BlnI	CCTAGG	1 cut(s)	1595
BlsI	GCNGC	7 cut(s)	66, 262, 435, 464, 1375, 1408, 1549
Bme1390I	CCNGG	8 cut(s)	498, 741, 1388, 1543, 1688, 2014, 2244, 2304
Bme18I	GGWCC	4 cut(s)	457, 1151, 1697, 2206
BmeT110I	CYCGRG	1 cut(s)	2334
BmgBI	CACGTC	1 cut(s)	907
BmgT120I	GGNCC	5 cut(s)	457, 1151, 1193, 1697, 2206
BmiI	GGNNCC	6 cut(s)	1794, 2011, 2038, 2070, 2207, 2347
BmrFI	CCNGG	8 cut(s)	498, 741, 1388, 1543, 1688, 2014, 2244, 2304
BmrI	ACTGGG	2 cut(s)	693, 2212
BmsI	GCATC	6 cut(s)	314, 547, 637, 1142, 1393, 1453
BmuI	ACTGGG	2 cut(s)	693, 2212
BpiI	GAAGAC	1 cut(s)	1575
BpmI	CTGGAG	4 cut(s)	487, 519, 621, 2132
Bpu10I	CCTNAGC	1 cut(s)	1902
BpuEI	CTTGAG	1 cut(s)	709
BpuMI	CCSGG	4 cut(s)	1388, 1688, 2244, 2304
Bsa29I	ATCGAT	1 cut(s)	1136
BsaAI	YACGTR	1 cut(s)	2078
BsaBI	GATNNNNATC	2 cut(s)	677, 1110
BsaHI	GRCGYC	1 cut(s)	9
BsaXI	ACNNNNNCTCC	2 cut(s)	460, 490
Bse1I	ACTGG	6 cut(s)	106, 688, 1132, 1700, 2207, 2232
Bse8I	GATNNNNATC	2 cut(s)	677, 1110
BseBI	CCWGG	4 cut(s)	498, 741, 1543, 2014
BseCI	ATCGAT	1 cut(s)	1136
BseGI	GGATG	7 cut(s)	391, 539, 823, 1213, 1468, 1852, 2011
BseJI	GATNNNNATC	2 cut(s)	677, 1110
BseMII	CTCAG	2 cut(s)	1285, 1916
BseNI	ACTGG	6 cut(s)	106, 688, 1132, 1700, 2207, 2232
BseRI	GAGGAG	3 cut(s)	1383, 1741, 1802
BseXI	GCAGC	7 cut(s)	51, 247, 420, 474, 1360, 1418, 1559
BseYI	CCCAGC	1 cut(s)	1415
BsgI	GTGCAG	3 cut(s)	50, 867, 1077
BshFI	GGCC	3 cut(s)	863, 1195, 1675
BshNI	GGYRCC	2 cut(s)	2009, 2345
BshVI	ATCGAT	1 cut(s)	1136
BsiHKAI	GWGCWC	3 cut(s)	253, 1903, 2121
BsiHKCI	CYCGRG	1 cut(s)	2334
BsiSI	CCGG	4 cut(s)	1388, 1688, 2243, 2304
BslFI	GGGAC	7 cut(s)	43, 399, 551, 734, 1649, 2030, 2219
BsmAI	GTCTC	3 cut(s)	110, 520, 1325
BsmFI	GGGAC	7 cut(s)	43, 399, 551, 734, 1649, 2030, 2219
BsmI	GAATGC	1 cut(s)	1455
BsnI	GGCC	3 cut(s)	863, 1195, 1675
BsoBI	CYCGRG	1 cut(s)	2334
Bsp1286I	GDGCHC	4 cut(s)	253, 621, 1903, 2121
Bsp1407I	TGTACA	1 cut(s)	1746
Bsp19I	CCATGG	1 cut(s)	2031
BspACI	CCGC	2 cut(s)	91, 460
BspANI	GGCC	3 cut(s)	863, 1195, 1675
BspCNI	CTCAG	2 cut(s)	1284, 1915
BspDI	ATCGAT	1 cut(s)	1136
BspHI	TCATGA	2 cut(s)	1099, 1920
BspLI	GGNNCC	6 cut(s)	1794, 2011, 2038, 2070, 2207, 2347
BspMI	ACCTGC	1 cut(s)	2259
BspPI	GGATC	4 cut(s)	1000, 1787, 1800, 1984
BspT107I	GGYRCC	2 cut(s)	2009, 2345
BspTI	CTTAAG	1 cut(s)	1610
BsrGI	TGTACA	1 cut(s)	1746
BsrI	ACTGG	6 cut(s)	106, 688, 1132, 1700, 2207, 2232
BssNI	GRCGYC	1 cut(s)	9
BssT1I	CCWWGG	8 cut(s)	711, 1163, 1595, 1796, 1822, 2031, 2122, 2328
Bst2UI	CCWGG	4 cut(s)	498, 741, 1543, 2014
Bst6I	CTCTTC	1 cut(s)	108
BstACI	GRCGYC	1 cut(s)	9
BstAFI	CTTAAG	1 cut(s)	1610
BstAUI	TGTACA	1 cut(s)	1746
BstBAI	YACGTR	1 cut(s)	2078
BstC8I	GCNNGC	3 cut(s)	1764, 2073, 2129
BstDEI	CTNAG	2 cut(s)	1271, 1902
BstDSI	CCRYGG	1 cut(s)	2031
BstEII	GGTNACC	1 cut(s)	2246
BstENI	CCTNNNNNAGG	1 cut(s)	715
BstF5I	GGATG	7 cut(s)	391, 539, 823, 1213, 1468, 1852, 2011
BstMAI	GTCTC	3 cut(s)	110, 520, 1325
BstMWI	GCNNNNNNNGC	6 cut(s)	257, 1192, 1276, 1412, 1547, 2036
BstNI	CCWGG	4 cut(s)	498, 741, 1543, 2014
BstNSI	RCATGY	3 cut(s)	428, 1589, 2131
BstPI	GGTNACC	1 cut(s)	2246
BstSCI	CCNGG	8 cut(s)	496, 739, 1386, 1541, 1686, 2012, 2242, 2302
BstV1I	GCAGC	7 cut(s)	51, 247, 420, 474, 1360, 1418, 1559
BstV2I	GAAGAC	1 cut(s)	1575
BstX2I	RGATCY	2 cut(s)	1792, 1976
BstYI	RGATCY	2 cut(s)	1792, 1976
Bsu15I	ATCGAT	1 cut(s)	1136
BsuI	GTATCC	3 cut(s)	358, 1081, 1384
BsuRI	GGCC	3 cut(s)	863, 1195, 1675
BsuTUI	ATCGAT	1 cut(s)	1136
BtgI	CCRYGG	1 cut(s)	2031
BtrI	CACGTC	1 cut(s)	907
BtsCI	GGATG	7 cut(s)	391, 539, 823, 1213, 1468, 1852, 2011
BtsI	GCAGTG	1 cut(s)	82
BtsIMutI	CAGTG	8 cut(s)	82, 99, 276, 545, 681, 900, 979, 2225
BveI	ACCTGC	1 cut(s)	2259
Cac8I	GCNNGC	3 cut(s)	1764, 2073, 2129
CciI	TCATGA	2 cut(s)	1099, 1920
Cfr13I	GGNCC	5 cut(s)	457, 1151, 1193, 1697, 2206
ClaI	ATCGAT	1 cut(s)	1136
CseI	GACGC	3 cut(s)	17, 40, 1923
CsiI	ACCWGGT	1 cut(s)	739
Csp6I	GTAC	5 cut(s)	329, 550, 1259, 1747, 2113
CspCI	CAANNNNNGTGG	4 cut(s)	227, 262, 611, 646
CviQI	GTAC	5 cut(s)	329, 550, 1259, 1747, 2113
DdeI	CTNAG	2 cut(s)	1271, 1902
DraIII	CACNNNGTG	1 cut(s)	687
EaeI	YGGCCR	2 cut(s)	861, 1673
Eam1104I	CTCTTC	1 cut(s)	108
EarI	CTCTTC	1 cut(s)	108
Ecl136II	GAGCTC	1 cut(s)	1901
Eco130I	CCWWGG	8 cut(s)	711, 1163, 1595, 1796, 1822, 2031, 2122, 2328
Eco24I	GRGCYC	2 cut(s)	621, 1903
Eco32I	GATATC	2 cut(s)	640, 751
Eco47I	GGWCC	4 cut(s)	457, 1151, 1697, 2206
Eco53kI	GAGCTC	1 cut(s)	1901
Eco57I	CTGAAG	1 cut(s)	1419
Eco72I	CACGTG	1 cut(s)	2078
Eco88I	CYCGRG	1 cut(s)	2334
Eco91I	GGTNACC	1 cut(s)	2246
EcoICRI	GAGCTC	1 cut(s)	1901
EcoNI	CCTNNNNNAGG	1 cut(s)	715
EcoO109I	RGGNCCY	2 cut(s)	1193, 2206
EcoO65I	GGTNACC	1 cut(s)	2246
EcoRI	GAATTC	1 cut(s)	2312
EcoRII	CCWGG	4 cut(s)	496, 739, 1541, 2012
EcoRV	GATATC	2 cut(s)	640, 751
EcoT14I	CCWWGG	8 cut(s)	711, 1163, 1595, 1796, 1822, 2031, 2122, 2328
EcoT38I	GRGCYC	2 cut(s)	621, 1903
ErhI	CCWWGG	8 cut(s)	711, 1163, 1595, 1796, 1822, 2031, 2122, 2328
FalI	AAGNNNNNCTT	4 cut(s)	1147, 1179, 1245, 1277
FaqI	GGGAC	7 cut(s)	43, 399, 551, 734, 1649, 2030, 2219
Fnu4HI	GCNGC	7 cut(s)	65, 261, 434, 463, 1374, 1407, 1548
FokI	GGATG	7 cut(s)	398, 546, 830, 1220, 1475, 1859, 2018
FriOI	GRGCYC	2 cut(s)	621, 1903
Fsp4HI	GCNGC	7 cut(s)	65, 261, 434, 463, 1374, 1407, 1548
FspBI	CTAG	4 cut(s)	177, 987, 1596, 2342
GluI	GCNGC	7 cut(s)	65, 261, 434, 463, 1374, 1407, 1548
GsaI	CCCAGC	1 cut(s)	1419
GsuI	CTGGAG	4 cut(s)	487, 519, 621, 2132
HaeIII	GGCC	3 cut(s)	863, 1195, 1675
HapII	CCGG	4 cut(s)	1388, 1688, 2243, 2304
HgaI	GACGC	3 cut(s)	17, 40, 1923
Hin1I	GRCGYC	1 cut(s)	9
HincII	GTYRAC	2 cut(s)	1954, 2182
HindII	GTYRAC	2 cut(s)	1954, 2182
HpaI	GTTAAC	1 cut(s)	2182
HpaII	CCGG	4 cut(s)	1388, 1688, 2243, 2304
HphI	GGTGA	4 cut(s)	17, 773, 1849, 2240
Hpy166II	GTNNAC	7 cut(s)	146, 910, 970, 1647, 1749, 1954, 2182
Hpy188I	TCNGA	6 cut(s)	1274, 1355, 1888, 2023, 2085, 2356
Hpy8I	GTNNAC	7 cut(s)	146, 910, 970, 1647, 1749, 1954, 2182
Hpy99I	CGWCG	2 cut(s)	1917, 1961
HpyAV	CCTTC	8 cut(s)	344, 782, 1184, 1426, 1837, 2050, 2152, 2276
HpyCH4IV	ACGT	3 cut(s)	906, 2077, 2233
HpyF10VI	GCNNNNNNNGC	6 cut(s)	257, 1192, 1276, 1412, 1547, 2036
HpyF3I	CTNAG	2 cut(s)	1271, 1902
HpySE526I	ACGT	3 cut(s)	906, 2077, 2233
Hsp92I	GRCGYC	1 cut(s)	9
KspAI	GTTAAC	1 cut(s)	2182
LmnI	GCTCC	5 cut(s)	302, 1370, 1600, 2036, 2068
Lsp1109I	GCAGC	7 cut(s)	51, 247, 420, 474, 1360, 1418, 1559
LweI	GCATC	6 cut(s)	314, 547, 637, 1142, 1393, 1453
MabI	ACCWGGT	1 cut(s)	739
MaeI	CTAG	4 cut(s)	177, 987, 1596, 2342
MaeII	ACGT	3 cut(s)	906, 2077, 2233
MaeIII	GTNAC	7 cut(s)	5, 541, 765, 929, 2246, 2272, 2290
MfeI	CAATTG	1 cut(s)	1359
MflI	RGATCY	2 cut(s)	1792, 1976
MhlI	GDGCHC	4 cut(s)	253, 621, 1903, 2121
MlsI	TGGCCA	2 cut(s)	863, 1675
MluNI	TGGCCA	2 cut(s)	863, 1675
MlyI	GAGTC	7 cut(s)	239, 296, 478, 493, 716, 1700, 2012
MmeI	TCCRAC	2 cut(s)	2068, 2248
Mox20I	TGGCCA	2 cut(s)	863, 1675
MroXI	GAANNNNTTC	1 cut(s)	402
MscI	TGGCCA	2 cut(s)	863, 1675
MseI	TTAA	8 cut(s)	311, 480, 771, 842, 954, 1611, 1758, 2181
MslI	CAYNNNNRTG	1 cut(s)	905
Msp20I	TGGCCA	2 cut(s)	863, 1675
MspA1I	CMGCKG	2 cut(s)	465, 1550
MspCI	CTTAAG	1 cut(s)	1610
MspI	CCGG	4 cut(s)	1388, 1688, 2243, 2304
MspR9I	CCNGG	8 cut(s)	498, 741, 1388, 1543, 1688, 2014, 2244, 2304
MunI	CAATTG	1 cut(s)	1359
Mva1269I	GAATGC	1 cut(s)	1455
MvaI	CCWGG	4 cut(s)	498, 741, 1543, 2014
MwoI	GCNNNNNNNGC	6 cut(s)	257, 1192, 1276, 1412, 1547, 2036
NciI	CCSGG	4 cut(s)	1388, 1688, 2244, 2304
NcoI	CCATGG	1 cut(s)	2031
NlaIV	GGNNCC	6 cut(s)	1794, 2011, 2038, 2070, 2207, 2347
NmeAIII	GCCGAG	2 cut(s)	37, 1162
NmuCI	GTSAC	3 cut(s)	5, 2246, 2290
NspI	RCATGY	3 cut(s)	428, 1589, 2131
OliI	CACNNNNGTG	1 cut(s)	905
PaeI	GCATGC	1 cut(s)	2131
PaeR7I	CTCGAG	1 cut(s)	2334
PagI	TCATGA	2 cut(s)	1099, 1920
PaqCI	CACCTGC	1 cut(s)	2259
PciI	ACATGT	1 cut(s)	424
PctI	GAATGC	1 cut(s)	1455
PdmI	GAANNNNTTC	1 cut(s)	402
PfeI	GAWTC	7 cut(s)	1513, 1683, 1828, 1883, 1907, 2086, 2138
PflFI	GACNNNGTC	1 cut(s)	1286
PflMI	CCANNNNNTGG	2 cut(s)	941, 2078
PfoI	TCCNGGA	3 cut(s)	496, 1386, 1686
PkrI	GCNGC	7 cut(s)	66, 262, 435, 464, 1375, 1408, 1549
PleI	GAGTC	7 cut(s)	238, 295, 477, 492, 716, 1699, 2012
PmaCI	CACGTG	1 cut(s)	2078
PmlI	CACGTG	1 cut(s)	2078
PpsI	GAGTC	7 cut(s)	238, 295, 477, 492, 716, 1699, 2012
Ppu21I	YACGTR	1 cut(s)	2078
PpuMI	RGGWCCY	1 cut(s)	2206
PscI	ACATGT	1 cut(s)	424
PshBI	ATTAAT	1 cut(s)	311
Psp124BI	GAGCTC	1 cut(s)	1903
Psp5II	RGGWCCY	1 cut(s)	2206
Psp6I	CCWGG	4 cut(s)	496, 739, 1541, 2012
PspCI	CACGTG	1 cut(s)	2078
PspEI	GGTNACC	1 cut(s)	2246
PspFI	CCCAGC	1 cut(s)	1415
PspGI	CCWGG	4 cut(s)	496, 739, 1541, 2012
PspN4I	GGNNCC	6 cut(s)	1794, 2011, 2038, 2070, 2207, 2347
PspPI	GGNCC	5 cut(s)	457, 1151, 1193, 1697, 2206
PspPPI	RGGWCCY	1 cut(s)	2206
PspXI	VCTCGAGB	1 cut(s)	2334
PsuI	RGATCY	2 cut(s)	1792, 1976
PsyI	GACNNNGTC	1 cut(s)	1286
PvuII	CAGCTG	2 cut(s)	465, 1550
RsaI	GTAC	5 cut(s)	330, 551, 1260, 1748, 2114
RsaNI	GTAC	5 cut(s)	329, 550, 1259, 1747, 2113
RseI	CAYNNNNRTG	1 cut(s)	905
SacI	GAGCTC	1 cut(s)	1903
SaqAI	TTAA	8 cut(s)	311, 480, 771, 842, 954, 1611, 1758, 2181
SatI	GCNGC	7 cut(s)	65, 261, 434, 463, 1374, 1407, 1548
Sau96I	GGNCC	5 cut(s)	457, 1151, 1193, 1697, 2206
SchI	GAGTC	7 cut(s)	239, 296, 478, 493, 716, 1700, 2012
ScrFI	CCNGG	8 cut(s)	498, 741, 1388, 1543, 1688, 2014, 2244, 2304
SduI	GDGCHC	4 cut(s)	253, 621, 1903, 2121
SexAI	ACCWGGT	1 cut(s)	739
SfaNI	GCATC	6 cut(s)	314, 547, 637, 1142, 1393, 1453
Sfr274I	CTCGAG	1 cut(s)	2334
SinI	GGWCC	4 cut(s)	457, 1151, 1697, 2206
SlaI	CTCGAG	1 cut(s)	2334
SmiMI	CAYNNNNRTG	1 cut(s)	905
SmlI	CTYRAG	3 cut(s)	724, 1610, 2334
SmoI	CTYRAG	3 cut(s)	724, 1610, 2334
SphI	GCATGC	1 cut(s)	2131
SsiI	CCGC	2 cut(s)	91, 460
SspI	AATATT	1 cut(s)	1713
SspMI	CTAG	4 cut(s)	177, 987, 1596, 2342
SstI	GAGCTC	1 cut(s)	1903
StyD4I	CCNGG	8 cut(s)	496, 739, 1386, 1541, 1686, 2012, 2242, 2302
StyI	CCWWGG	8 cut(s)	711, 1163, 1595, 1796, 1822, 2031, 2122, 2328
TaiI	ACGT	3 cut(s)	909, 2080, 2236
TaqI	TCGA	3 cut(s)	1136, 1450, 2335
TatI	WGTACW	2 cut(s)	1258, 1746
TfiI	GAWTC	7 cut(s)	1513, 1683, 1828, 1883, 1907, 2086, 2138
Tru1I	TTAA	8 cut(s)	311, 480, 771, 842, 954, 1611, 1758, 2181
Tru9I	TTAA	8 cut(s)	311, 480, 771, 842, 954, 1611, 1758, 2181
TscAI	CASTG	8 cut(s)	82, 106, 283, 552, 688, 907, 979, 2232
TseFI	GTSAC	3 cut(s)	5, 2246, 2290
TseI	GCWGC	7 cut(s)	64, 260, 433, 462, 1373, 1406, 1547
Tsp45I	GTSAC	3 cut(s)	5, 2246, 2290
TspDTI	ATGAA	9 cut(s)	26, 395, 434, 1489, 1872, 1909, 1922, 2078, 2151
TspGWI	ACGGA	3 cut(s)	785, 2087, 2309
TspRI	CASTG	8 cut(s)	82, 106, 283, 552, 688, 907, 979, 2232
Tth111I	GACNNNGTC	1 cut(s)	1286
Van91I	CCANNNNNTGG	2 cut(s)	941, 2078
Vha464I	CTTAAG	1 cut(s)	1610
VpaK11BI	GGWCC	4 cut(s)	457, 1151, 1697, 2206
VspI	ATTAAT	1 cut(s)	311
XagI	CCTNNNNNAGG	1 cut(s)	715
XapI	RAATTY	7 cut(s)	82, 378, 491, 588, 705, 1120, 2312
XceI	RCATGY	3 cut(s)	428, 1589, 2131
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1161
XhoI	CTCGAG	1 cut(s)	2334
XmaJI	CCTAGG	1 cut(s)	1595
XmnI	GAANNNNTTC	1 cut(s)	402
XspI	CTAG	4 cut(s)	177, 987, 1596, 2342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.