Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0005265

Physical Location & Seq

Genomic Coordinates Reverse (-)

58430499 .. 58436211

Gene Structure 5713 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG401200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGGTGACGCGGAGCATTGGCTACATGGGACGCTTCATGCTACGATCTATGAGGTTGATAAGCTGCACAGTAGCAGTGGAAATTTCCTCCGCAAGATCACTGGAAAACTTGAAGAGACTGTTGGTATTGGCAAAGGAATGAGTAAACTGTATGCAACTGTTGATCTGGAAAGGGCTAGGGTTGGTCGCACCAGAGTTGTAGGAGAACCCTCCAATCCCAAGTGGTTTGAGTCCTTCCACATTTATTGTGCTCATGTTGCTGCAAATGTTATATTCACTGTCAAGGAGTCTAATCCTATTGGAGCATCATTAATTGGTAGAGCGTATGTACCTGTTGAACAACTTTTTGAAGGGGAAGAAGTGGATACATGGGCTGAAATTTTGGATGAGAAAAAAGAACCTGTTCATGGCAGTCCCAAGATACATGTGAAGCTACAATTTTTTCATGTTTCAAAGGACCGCAGTTGGAGTCAAGGTATTAAGAGTCCTAAATTTCCTGGAGTTCCATTTACTTTTTTCTCACAGAGACAAGGATGTAAGGTTACACTGTACCAAGATGCTCATGTCCCAGATAACTTTATTCCTAAAATTCCTCTTGCTGGAGGCAAGAATTATGAGCCCCACAGATGTTGGGAAGATATCTTTGATGCAATTACTAATGCAAAACACCTGATCTATATCACTGGGTGGTCAGTTTATACTGAAATTTCCTTGGTAAGGGACTCAAGGAGGTCAAAACCTGGTGGCGATATCACTATTGGTGAGTTACTTAAAAAGAAAGCAAGTGAAGGTGTCCGTGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTTCCTTTATTAAAAAAAGATGGAATGATGGCCACCCATGATGAGGCAACTGCGCAGTATTTCCAGAATACTGACGTGAACTGTGTCTTATGCCCCCGTAATCCAGATGGTGGTGGAAGCATTGTTCAGGGGGCACAAATCTCTACCATGTTCACTCATCATCAGAAGATTGTGGTTGTGGACAGTGAAATGCCAACTAGAGGATCACAGAGTAGAAGAATTGTGAGTTTTGTTGGGGGTATTGATCTGTGTGATGGAAGATATGATACCCAATTCCATTCACTTTTCAGGACATTGGATACTGCACATCATGACGATTTCCATCAGCCAAATTTTACTGGTGCATCGATTACAAAAGGTGGTCCAAGAGAACCTTGGCATGATATTCACTCTCGGCTGGAAGGGCCTATTGCTTGGGATGTGTTGTTCAACTTTGAGCAGAGATGGAGAAAGCAAGGTGGTAAAGATGTACTTGTTCAGCTCAGAGAGCTTGACAATGTCATTGTTCCACCATCTCCTGTTATGTTCCCAGATGACCATGAGACATGGAATGTTCAGTTATTCAGATCAATTGATGGAGGAGCTGCTTTTGGCTTCCCGGATACGCCTGAAGATGCAGCCAGAGCTGGGCTTGTTAGTGGGAAGGATAACATCATTGATCGAAGCATTCAGGATGCTTATATCCATGCTATTCGCCGTGCAAAGAACTTCATATATATTGAGAATCAGTATTTTCTTGGTAGCTCTTTTGCCTGGGCAGCTGATGGTATAAAGCCCGAAGACATTGGTGCTTTGCATGTAATTCCTAGGGAGCTTTCGCTTAAGATTGCTGACAAGATTGCGAATGGGGAGAGGTTTACTGTCTATGTTGTTGTCCCAATGTGGCCAGAGGGAATCCCGGAGTCTGGACCAGTTCAGGCAATATTAGATTGGCAGAGGAGGACAATGCAAATGATGTACACAGATATTAAGCAGGCACTTGATAAAAACGGTGTTGAGGAGGATCCAAGGAACTATTTGACATTTTTCTGCCTTGGGAATCGGGAGGTGAAGAAGGATGGAGAATATGAACCCACCGAGCGACCAGAGGCAGATTCGGATTATATTAGAGCTCAGGAATCCCGACGCTTCATGATTTATGTTCATACCAAGATGATGATAGGTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0009536 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

666

Amino Acids

75.38

Weight (kDa)

6.16

Isoelectric Point (pI)

34.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	45 - 126	5.6e-09	C2 domain
PLDc	PF00614	327 - 364	1.2e-06	Phospholipase D Active site motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005265)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52570 AT1G52570 AT1G52570 AT3G15730
fragaria_vesca	FvH4_6g29920 FvH4_6g29920 FvH4_6g29920 FvH4_6g29920 FvH4_6g29920 FvH4_6g29920
malus_domestica	MD00G1090900.v1.1 MD17G1209200.v1.1
prunus_persica	Prupe.3G084800_v2.0.a1 Prupe.3G084800_v2.0.a1 Prupe.3G084800_v2.0.a1
pyrus_communis	pycom09g14080
rosa_chinensis	RchiOBHm_Chr2g0135901
rosa_laevigata	RLG00000019489
rosa_multiflora	Rmu_sc0001825.1_g000006 Rmu_sc0007848.1_g000004
rosa_roxburghii	Rroxscaffold_2G00108790
rosa_rugosa	Rorug02G0326700 Rorug02G0326700 Rorug02G0326700
rosa_samantha	Rh2AG378300 Rh2BG384800 Rh2CG364100 Rh2DG401200
rosa_wichuraiana	Rw2G030820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	885
AccB7I	CCANNNNNTGG	1 cut(s)	941
AccII	CGCG	1 cut(s)	11
AciI	CCGC	3 cut(s)	11, 91, 460
AclWI	GGATC	3 cut(s)	1042, 1829, 1842
AcoI	YGGCCR	2 cut(s)	861, 1715
AcsI	RAATTY	6 cut(s)	82, 378, 491, 588, 705, 1162
AcuI	CTGAAG	1 cut(s)	1461
AdeI	CACNNNGTG	1 cut(s)	687
AfaI	GTAC	4 cut(s)	330, 551, 1302, 1790
AfiI	CCNNNNNNNGG	8 cut(s)	407, 599, 717, 874, 941, 1031, 1458, 1736
AflII	CTTAAG	1 cut(s)	1652
AflIII	ACRYGT	1 cut(s)	424
AgsI	TTSAA	5 cut(s)	113, 338, 350, 453, 1261
AjiI	CACGTC	1 cut(s)	907
AjnI	CCWGG	3 cut(s)	496, 739, 1583
AjuI	GAANNNNNNNTTGG	2 cut(s)	105, 137
AloI	GAACNNNNNNTCC	6 cut(s)	817, 849, 939, 971, 1241, 1273
Alw21I	GWGCWC	2 cut(s)	253, 1945
Alw26I	GTCTC	3 cut(s)	110, 520, 1367
AlwI	GGATC	3 cut(s)	1042, 1829, 1842
AoxI	GGCC	3 cut(s)	861, 1235, 1715
ApeKI	GCWGC	5 cut(s)	64, 260, 1415, 1448, 1589
ApoI	RAATTY	6 cut(s)	82, 378, 491, 588, 705, 1162
AseI	ATTAAT	1 cut(s)	311
Asp700I	GAANNNNTTC	1 cut(s)	402
AspA2I	CCTAGG	1 cut(s)	1637
AspLEI	GCGC	1 cut(s)	886
AspS9I	GGNCC	4 cut(s)	457, 1193, 1235, 1739
AsuC2I	CCSGG	2 cut(s)	1430, 1730
AsuHPI	GGTGA	3 cut(s)	17, 773, 1891
AvaII	GGWCC	3 cut(s)	457, 1193, 1739
AvrII	CCTAGG	1 cut(s)	1637
BaeGI	GKGCMC	1 cut(s)	967
BalI	TGGCCA	2 cut(s)	863, 1717
BamHI	GGATCC	1 cut(s)	1834
BanII	GRGCYC	2 cut(s)	621, 1945
BarI	GAAGNNNNNNTAC	2 cut(s)	1081, 1113
BbsI	GAAGAC	1 cut(s)	1617
Bbv12I	GWGCWC	2 cut(s)	253, 1945
BbvI	GCAGC	5 cut(s)	51, 247, 1402, 1460, 1601
BceAI	ACGGC	1 cut(s)	1512
BciT130I	CCWGG	3 cut(s)	498, 741, 1585
BciVI	GTATCC	3 cut(s)	358, 1123, 1426
BcnI	CCSGG	2 cut(s)	1430, 1730
BcoDI	GTCTC	3 cut(s)	110, 520, 1367
BfaI	CTAG	3 cut(s)	177, 1029, 1638
BfrI	CTTAAG	1 cut(s)	1652
BfuI	GTATCC	3 cut(s)	358, 1123, 1426
BisI	GCNGC	5 cut(s)	65, 261, 1416, 1449, 1590
BlnI	CCTAGG	1 cut(s)	1637
BlsI	GCNGC	5 cut(s)	66, 262, 1417, 1450, 1591
Bme1390I	CCNGG	5 cut(s)	498, 741, 1430, 1585, 1730
Bme18I	GGWCC	3 cut(s)	457, 1193, 1739
BmgBI	CACGTC	1 cut(s)	907
BmgT120I	GGNCC	4 cut(s)	457, 1193, 1235, 1739
BmiI	GGNNCC	1 cut(s)	1836
BmrFI	CCNGG	5 cut(s)	498, 741, 1430, 1585, 1730
BmrI	ACTGGG	1 cut(s)	693
BmsI	GCATC	6 cut(s)	314, 547, 637, 1184, 1435, 1495
BmuI	ACTGGG	1 cut(s)	693
BpiI	GAAGAC	1 cut(s)	1617
BpmI	CTGGAG	2 cut(s)	519, 621
Bpu10I	CCTNAGC	1 cut(s)	1944
BpuEI	CTTGAG	1 cut(s)	709
BpuMI	CCSGG	2 cut(s)	1430, 1730
Bsa29I	ATCGAT	1 cut(s)	1178
BsaBI	GATNNNNATC	2 cut(s)	677, 1152
BsaJI	CCNNGG	6 cut(s)	711, 1205, 1584, 1637, 1838, 1864
BsaXI	ACNNNNNCTCC	2 cut(s)	460, 490
Bsc4I	CCNNNNNNNGG	8 cut(s)	407, 599, 717, 874, 941, 1031, 1458, 1736
Bse1I	ACTGG	4 cut(s)	106, 688, 1174, 1742
Bse8I	GATNNNNATC	2 cut(s)	677, 1152
BseBI	CCWGG	3 cut(s)	498, 741, 1585
BseCI	ATCGAT	1 cut(s)	1178
BseDI	CCNNGG	6 cut(s)	711, 1205, 1584, 1637, 1838, 1864
BseGI	GGATG	6 cut(s)	391, 539, 823, 1255, 1510, 1894
BseJI	GATNNNNATC	2 cut(s)	677, 1152
BseLI	CCNNNNNNNGG	8 cut(s)	407, 599, 717, 874, 941, 1031, 1458, 1736
BseMII	CTCAG	2 cut(s)	1327, 1958
BseNI	ACTGG	4 cut(s)	106, 688, 1174, 1742
BseRI	GAGGAG	3 cut(s)	1425, 1783, 1844
BseSI	GKGCMC	1 cut(s)	967
BseXI	GCAGC	5 cut(s)	51, 247, 1402, 1460, 1601
BseYI	CCCAGC	1 cut(s)	1457
BsgI	GTGCAG	2 cut(s)	50, 1119
Bsh1236I	CGCG	1 cut(s)	11
BshFI	GGCC	3 cut(s)	863, 1237, 1717
BshVI	ATCGAT	1 cut(s)	1178
BsiHKAI	GWGCWC	2 cut(s)	253, 1945
BsiSI	CCGG	2 cut(s)	1430, 1730
BslFI	GGGAC	5 cut(s)	43, 399, 551, 734, 1691
BslI	CCNNNNNNNGG	8 cut(s)	407, 599, 717, 874, 941, 1031, 1458, 1736
BsmAI	GTCTC	3 cut(s)	110, 520, 1367
BsmFI	GGGAC	5 cut(s)	43, 399, 551, 734, 1691
BsmI	GAATGC	1 cut(s)	1497
BsnI	GGCC	3 cut(s)	863, 1237, 1717
Bsp1286I	GDGCHC	4 cut(s)	253, 621, 967, 1945
Bsp1407I	TGTACA	1 cut(s)	1788
Bsp143I	GATC	9 cut(s)	45, 96, 163, 672, 1034, 1075, 1397, 1489, 1834
BspACI	CCGC	3 cut(s)	11, 91, 460
BspANI	GGCC	3 cut(s)	863, 1237, 1717
BspCNI	CTCAG	2 cut(s)	1326, 1957
BspDI	ATCGAT	1 cut(s)	1178
BspFNI	CGCG	1 cut(s)	11
BspHI	TCATGA	2 cut(s)	1141, 1962
BspLI	GGNNCC	1 cut(s)	1836
BspPI	GGATC	3 cut(s)	1042, 1829, 1842
BspTI	CTTAAG	1 cut(s)	1652
BsrGI	TGTACA	1 cut(s)	1788
BsrI	ACTGG	4 cut(s)	106, 688, 1174, 1742
BssECI	CCNNGG	6 cut(s)	711, 1205, 1584, 1637, 1838, 1864
BssMI	GATC	9 cut(s)	45, 96, 163, 672, 1034, 1075, 1397, 1489, 1834
BssT1I	CCWWGG	5 cut(s)	711, 1205, 1637, 1838, 1864
Bst2UI	CCWGG	3 cut(s)	498, 741, 1585
Bst6I	CTCTTC	1 cut(s)	108
BstAFI	CTTAAG	1 cut(s)	1652
BstAUI	TGTACA	1 cut(s)	1788
BstC8I	GCNNGC	1 cut(s)	1806
BstDEI	CTNAG	2 cut(s)	1313, 1944
BstENI	CCTNNNNNAGG	1 cut(s)	715
BstF5I	GGATG	6 cut(s)	391, 539, 823, 1255, 1510, 1894
BstFNI	CGCG	1 cut(s)	11
BstHHI	GCGC	1 cut(s)	886
BstKTI	GATC	9 cut(s)	48, 99, 166, 675, 1037, 1078, 1400, 1492, 1837
BstMAI	GTCTC	3 cut(s)	110, 520, 1367
BstMBI	GATC	9 cut(s)	45, 96, 163, 672, 1034, 1075, 1397, 1489, 1834
BstMWI	GCNNNNNNNGC	5 cut(s)	257, 1234, 1318, 1454, 1589
BstNI	CCWGG	3 cut(s)	498, 741, 1585
BstNSI	RCATGY	2 cut(s)	428, 1631
BstSCI	CCNGG	5 cut(s)	496, 739, 1428, 1583, 1728
BstSLI	GKGCMC	1 cut(s)	967
BstUI	CGCG	1 cut(s)	11
BstV1I	GCAGC	5 cut(s)	51, 247, 1402, 1460, 1601
BstV2I	GAAGAC	1 cut(s)	1617
BstX2I	RGATCY	1 cut(s)	1834
BstYI	RGATCY	1 cut(s)	1834
Bsu15I	ATCGAT	1 cut(s)	1178
BsuI	GTATCC	3 cut(s)	358, 1123, 1426
BsuRI	GGCC	3 cut(s)	863, 1237, 1717
BsuTUI	ATCGAT	1 cut(s)	1178
BtrI	CACGTC	1 cut(s)	907
BtsCI	GGATG	6 cut(s)	391, 539, 823, 1255, 1510, 1894
BtsI	GCAGTG	1 cut(s)	82
BtsIMutI	CAGTG	6 cut(s)	82, 99, 276, 545, 681, 1021
Cac8I	GCNNGC	1 cut(s)	1806
CciI	TCATGA	2 cut(s)	1141, 1962
CfoI	GCGC	1 cut(s)	886
Cfr13I	GGNCC	4 cut(s)	457, 1193, 1235, 1739
ClaI	ATCGAT	1 cut(s)	1178
CseI	GACGC	3 cut(s)	17, 40, 1965
CsiI	ACCWGGT	1 cut(s)	739
Csp6I	GTAC	4 cut(s)	329, 550, 1301, 1789
CspCI	CAANNNNNGTGG	4 cut(s)	227, 262, 611, 646
CviQI	GTAC	4 cut(s)	329, 550, 1301, 1789
DdeI	CTNAG	2 cut(s)	1313, 1944
DpnI	GATC	9 cut(s)	47, 98, 165, 674, 1036, 1077, 1399, 1491, 1836
DpnII	GATC	9 cut(s)	45, 96, 163, 672, 1034, 1075, 1397, 1489, 1834
DraIII	CACNNNGTG	1 cut(s)	687
EaeI	YGGCCR	2 cut(s)	861, 1715
Eam1104I	CTCTTC	1 cut(s)	108
EarI	CTCTTC	1 cut(s)	108
Ecl136II	GAGCTC	1 cut(s)	1943
Eco130I	CCWWGG	5 cut(s)	711, 1205, 1637, 1838, 1864
Eco24I	GRGCYC	2 cut(s)	621, 1945
Eco32I	GATATC	2 cut(s)	640, 751
Eco47I	GGWCC	3 cut(s)	457, 1193, 1739
Eco53kI	GAGCTC	1 cut(s)	1943
Eco57I	CTGAAG	1 cut(s)	1461
EcoICRI	GAGCTC	1 cut(s)	1943
EcoNI	CCTNNNNNAGG	1 cut(s)	715
EcoO109I	RGGNCCY	1 cut(s)	1235
EcoRII	CCWGG	3 cut(s)	496, 739, 1583
EcoRV	GATATC	2 cut(s)	640, 751
EcoT14I	CCWWGG	5 cut(s)	711, 1205, 1637, 1838, 1864
EcoT38I	GRGCYC	2 cut(s)	621, 1945
ErhI	CCWWGG	5 cut(s)	711, 1205, 1637, 1838, 1864
FalI	AAGNNNNNCTT	4 cut(s)	1189, 1221, 1287, 1319
FaqI	GGGAC	5 cut(s)	43, 399, 551, 734, 1691
Fnu4HI	GCNGC	5 cut(s)	65, 261, 1416, 1449, 1590
FokI	GGATG	6 cut(s)	398, 546, 830, 1262, 1517, 1901
FriOI	GRGCYC	2 cut(s)	621, 1945
Fsp4HI	GCNGC	5 cut(s)	65, 261, 1416, 1449, 1590
FspBI	CTAG	3 cut(s)	177, 1029, 1638
FspI	TGCGCA	1 cut(s)	885
GlaI	GCGC	1 cut(s)	885
GluI	GCNGC	5 cut(s)	65, 261, 1416, 1449, 1590
GsaI	CCCAGC	1 cut(s)	1461
GsuI	CTGGAG	2 cut(s)	519, 621
HaeIII	GGCC	3 cut(s)	863, 1237, 1717
HapII	CCGG	2 cut(s)	1430, 1730
HgaI	GACGC	3 cut(s)	17, 40, 1965
HhaI	GCGC	1 cut(s)	886
Hin6I	GCGC	1 cut(s)	884
HinP1I	GCGC	1 cut(s)	884
HpaII	CCGG	2 cut(s)	1430, 1730
HphI	GGTGA	3 cut(s)	17, 773, 1891
Hpy166II	GTNNAC	6 cut(s)	146, 910, 984, 1012, 1689, 1791
Hpy188I	TCNGA	4 cut(s)	996, 1316, 1397, 1930
Hpy8I	GTNNAC	6 cut(s)	146, 910, 984, 1012, 1689, 1791
Hpy99I	CGWCG	1 cut(s)	1959
HpyAV	CCTTC	6 cut(s)	244, 344, 782, 1226, 1468, 1879
HpyCH4IV	ACGT	1 cut(s)	906
HpyF10VI	GCNNNNNNNGC	5 cut(s)	257, 1234, 1318, 1454, 1589
HpyF3I	CTNAG	2 cut(s)	1313, 1944
HpySE526I	ACGT	1 cut(s)	906
HspAI	GCGC	1 cut(s)	884
Kzo9I	GATC	9 cut(s)	45, 96, 163, 672, 1034, 1075, 1397, 1489, 1834
LmnI	GCTCC	4 cut(s)	13, 302, 1412, 1642
Lsp1109I	GCAGC	5 cut(s)	51, 247, 1402, 1460, 1601
LweI	GCATC	6 cut(s)	314, 547, 637, 1184, 1435, 1495
MabI	ACCWGGT	1 cut(s)	739
MaeI	CTAG	3 cut(s)	177, 1029, 1638
MaeII	ACGT	1 cut(s)	906
MaeIII	GTNAC	3 cut(s)	5, 541, 765
MalI	GATC	9 cut(s)	47, 98, 165, 674, 1036, 1077, 1399, 1491, 1836
MboI	GATC	9 cut(s)	45, 96, 163, 672, 1034, 1075, 1397, 1489, 1834
MboII	GAAGA	9 cut(s)	125, 368, 647, 1009, 1059, 1101, 1454, 1622, 1894
MfeI	CAATTG	1 cut(s)	1401
MflI	RGATCY	1 cut(s)	1834
MhlI	GDGCHC	4 cut(s)	253, 621, 967, 1945
MlsI	TGGCCA	2 cut(s)	863, 1717
MluNI	TGGCCA	2 cut(s)	863, 1717
MlyI	GAGTC	6 cut(s)	239, 296, 478, 493, 716, 1742
MmeI	TCCRAC	1 cut(s)	446
Mox20I	TGGCCA	2 cut(s)	863, 1717
MroXI	GAANNNNTTC	1 cut(s)	402
MscI	TGGCCA	2 cut(s)	863, 1717
MseI	TTAA	6 cut(s)	311, 480, 771, 842, 1653, 1800
Msp20I	TGGCCA	2 cut(s)	863, 1717
MspA1I	CMGCKG	1 cut(s)	1592
MspCI	CTTAAG	1 cut(s)	1652
MspI	CCGG	2 cut(s)	1430, 1730
MspR9I	CCNGG	5 cut(s)	498, 741, 1430, 1585, 1730
MunI	CAATTG	1 cut(s)	1401
Mva1269I	GAATGC	1 cut(s)	1497
MvaI	CCWGG	3 cut(s)	498, 741, 1585
MvnI	CGCG	1 cut(s)	11
MwoI	GCNNNNNNNGC	5 cut(s)	257, 1234, 1318, 1454, 1589
NciI	CCSGG	2 cut(s)	1430, 1730
NdeII	GATC	9 cut(s)	45, 96, 163, 672, 1034, 1075, 1397, 1489, 1834
NlaIV	GGNNCC	1 cut(s)	1836
NmeAIII	GCCGAG	1 cut(s)	1204
NmuCI	GTSAC	1 cut(s)	5
NsbI	TGCGCA	1 cut(s)	885
NspI	RCATGY	2 cut(s)	428, 1631
PagI	TCATGA	2 cut(s)	1141, 1962
PciI	ACATGT	1 cut(s)	424
PctI	GAATGC	1 cut(s)	1497
PdmI	GAANNNNTTC	1 cut(s)	402
PfeI	GAWTC	5 cut(s)	1555, 1725, 1870, 1925, 1949
PflFI	GACNNNGTC	1 cut(s)	1328
PflMI	CCANNNNNTGG	1 cut(s)	941
PfoI	TCCNGGA	3 cut(s)	496, 1428, 1728
PkrI	GCNGC	5 cut(s)	66, 262, 1417, 1450, 1591
PleI	GAGTC	6 cut(s)	238, 295, 477, 492, 716, 1741
PpsI	GAGTC	6 cut(s)	238, 295, 477, 492, 716, 1741
PscI	ACATGT	1 cut(s)	424
PshBI	ATTAAT	1 cut(s)	311
Psp124BI	GAGCTC	1 cut(s)	1945
Psp6I	CCWGG	3 cut(s)	496, 739, 1583
PspFI	CCCAGC	1 cut(s)	1457
PspGI	CCWGG	3 cut(s)	496, 739, 1583
PspN4I	GGNNCC	1 cut(s)	1836
PspPI	GGNCC	4 cut(s)	457, 1193, 1235, 1739
PsuI	RGATCY	1 cut(s)	1834
PsyI	GACNNNGTC	1 cut(s)	1328
PvuII	CAGCTG	1 cut(s)	1592
RsaI	GTAC	4 cut(s)	330, 551, 1302, 1790
RsaNI	GTAC	4 cut(s)	329, 550, 1301, 1789
SacI	GAGCTC	1 cut(s)	1945
SaqAI	TTAA	6 cut(s)	311, 480, 771, 842, 1653, 1800
SatI	GCNGC	5 cut(s)	65, 261, 1416, 1449, 1590
Sau3AI	GATC	9 cut(s)	45, 96, 163, 672, 1034, 1075, 1397, 1489, 1834
Sau96I	GGNCC	4 cut(s)	457, 1193, 1235, 1739
SchI	GAGTC	6 cut(s)	239, 296, 478, 493, 716, 1742
ScrFI	CCNGG	5 cut(s)	498, 741, 1430, 1585, 1730
SduI	GDGCHC	4 cut(s)	253, 621, 967, 1945
SexAI	ACCWGGT	1 cut(s)	739
SfaNI	GCATC	6 cut(s)	314, 547, 637, 1184, 1435, 1495
SinI	GGWCC	3 cut(s)	457, 1193, 1739
SmlI	CTYRAG	2 cut(s)	724, 1652
SmoI	CTYRAG	2 cut(s)	724, 1652
SsiI	CCGC	3 cut(s)	11, 91, 460
SspI	AATATT	1 cut(s)	1755
SspMI	CTAG	3 cut(s)	177, 1029, 1638
SstI	GAGCTC	1 cut(s)	1945
StyD4I	CCNGG	5 cut(s)	496, 739, 1428, 1583, 1728
StyI	CCWWGG	5 cut(s)	711, 1205, 1637, 1838, 1864
TaiI	ACGT	1 cut(s)	909
TaqI	TCGA	2 cut(s)	1178, 1492
TatI	WGTACW	2 cut(s)	1300, 1788
TfiI	GAWTC	5 cut(s)	1555, 1725, 1870, 1925, 1949
Tru1I	TTAA	6 cut(s)	311, 480, 771, 842, 1653, 1800
Tru9I	TTAA	6 cut(s)	311, 480, 771, 842, 1653, 1800
TscAI	CASTG	6 cut(s)	82, 106, 283, 552, 688, 1021
TseFI	GTSAC	1 cut(s)	5
TseI	GCWGC	5 cut(s)	64, 260, 1415, 1448, 1589
Tsp45I	GTSAC	1 cut(s)	5
TspDTI	ATGAA	7 cut(s)	26, 395, 434, 1531, 1914, 1951, 1964
TspGWI	ACGGA	1 cut(s)	785
TspRI	CASTG	6 cut(s)	82, 106, 283, 552, 688, 1021
Tth111I	GACNNNGTC	1 cut(s)	1328
Van91I	CCANNNNNTGG	1 cut(s)	941
Vha464I	CTTAAG	1 cut(s)	1652
VpaK11BI	GGWCC	3 cut(s)	457, 1193, 1739
VspI	ATTAAT	1 cut(s)	311
XagI	CCTNNNNNAGG	1 cut(s)	715
XapI	RAATTY	6 cut(s)	82, 378, 491, 588, 705, 1162
XceI	RCATGY	2 cut(s)	428, 1631
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1203
XmaJI	CCTAGG	1 cut(s)	1637
XmnI	GAANNNNTTC	1 cut(s)	402
XspI	CTAG	3 cut(s)	177, 1029, 1638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.