Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0005265

Physical Location & Seq

Genomic Coordinates Reverse (-)

49344237 .. 49349963

Gene Structure 5727 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG364100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2349 bp

ATGAAATTTACTTTGCAGATCACTGGAAAACTTGAAGAGACTGTTGGTATTGGCAAAGGAATGAGTAAACTGTATGCAACTGTTGATCTGGAAAGGGCTAGGGTTGGTCGCACCAGAGTTGTAGGAGAACCCTCCAATCCCAAGTGGTTTGAGTCTTTCCACATTTATTGTGCTCATGTCGCTGCAAATGTTATATTCACTGTCAAGGAGTCTAATCCTATTGGAGCATCATTAATTGGTAGAGCGTATGTACCTGTTGAACAACTTTTTGAAGGGGAAGAAGTGGATACATGGGCTGAAATTTTGGATGAGAAAAAAGAACCTGTTCATGGCAGTCCCAAGATACATGTGAAGCTGCAATTTTTTCATGTTTCAAAGGACCGCAGTTGGAGCCAAGGTATTAAGAGTCCTAAATTTCCTGGAGTTCCATTTACCTTTTTCTCACAGAGACAAGGATGTAAGGTTACACTGTACCAAGATGCTCATGTCCCAGATAACTTTATTCCTAAAATTCCTCTTGCTGGAGGCAAGAATTATGAGCCCCACAGATGTTGGGAAGATATCTTTGATGCAATTACTAATGCAAAACACCTGATCTACATCACTGGGTGGTCAGTTTATACTGAAATTTCCTTGGTAAGGGACTCAAGGAGGTCAAAACCTGGTGGCGATATCACTATTGGTGAGTTACTTAAAAAGAAAGCAAGTGAAGGTGTCCGTGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTTCCTTTATTAAAAAAAGATGGAATGATGGCCACCCATGATGAGGCAACTGCACAGTATTTCCAGAATACTGACGTGAACTGTGTCTTATGCCCCCGTAATCCAGATGGTGGTGGAAGCATTGTTCAGGGGGCACAAATCTCTACCATGTTCACTCATCATCAGAAGATTGTGGTTGTGGACAGTGAAATGCCAACTAGAGGATCACAGAGTAGAAGAATTGTGAGTTTTGTTGGGGGTATTGATCTGTGTGATGGAAGATATGATACCCAATTCCATTCACTTTTCAGGACATTGGATACTGCACATCATGACGATTTCCATCAGCCAAATTTTACTGGTGCATTGATTACAAAAGGTGGTCCAAGAGAACCTTGGCATGATATTCACTCTCGGCTGGAAGGGCCTATTGCTTGGGATGTGTTGTTCAACTTTGAGCAGAGATGGAGAAAGCAAGGTGGTAAAGATGTACTTGTTCAGCTCAGAGAGCTTGACAATGTCATTATTCCACCATCTCCTGTTATGTTCCCAGATGACCATGAGACATGGAATGTTCAATTATTCAGATCAATTGATGGAGGAGCTGCTTTTGGCTTCCCGGATACGCCTGAAGATGCAGCCAGAGCTGGGCTTGTTAGTGGGAAGGATAACATCATTGATCGAAGCATTCAGGATGCTTATATCCATGCTATTCGCCGTGCAAAGAACTTCATATATATTGAGAATCAGTATTTTCTTGGTAGCTCTTTTGCCTGGGCAGCTGATGGTATAAAGCCCGAAGACATTGGTGCTTTGCATGTAATTCCTAGGGAGCTTTCGCTTAAGATTGCTGACAAGATTGCGAATGGGGAGAGGTTTACTGTCTATGTTGTTGTCCCAATGTGGCCAGAGGGAATCCCGGAGTCTGGACCAGTTCAGGCAATATTAGATTGGCAGAGGAGGACAATGCAAATGATGTACACAGATATTAAGCAGGCACTTGATAAAAACGGTGTTGAGGAGGATCCAAGGAACTATTTGACATTTTTCTGCCTTGGGAATCGGGAGGTGAAGAAGGATGGAGAGTATGAACCCACCGAGCGACCAGAGGCAGATTCGGATTATATTAGAGCTCAGGAATCCCGACGCTTCATGATTTATGTTCATACCAAGATGATGATAGTTGACGACGAATACATCATCATTGGATCTGCCAACATCAACCAGAGATCAATGGATGGTGCCAGGGACTCTGAAATAGCCATGGGAGCCTACCAACCATATCATCTATCAGTCAGGGAGCCAGCACGTGGTCAGATTCATGGTTTCCGTATGGCATTGTGGTACGAGCACCTTGGCATGCTTGATGAGTCCTTCCTCCAGCCAGAAAGCATTGAATGTATCACAAAGGTTAACCAGATTGCTGAAAAATACTGGGACCTCTATTCAAGTGAAACACTGGAACGTGATTTGCCGGGTCACCTGCTTCGCTATCCTGTTGGAGTTACCAGCGAAGGAGAAGTCACGGAGTTGCCCGGATTTGAATTCTTCCCTGACACCAAGGCTCGAGTGCTAGGTGCCAAATCAGACTATCTTCCTCCCATCATTACTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0009536 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

782

Amino Acids

88.65

Weight (kDa)

5.72

Isoelectric Point (pI)

38.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	19 - 100	1.3e-08	C2 domain
PLDc	PF00614	301 - 338	1.4e-06	Phospholipase D Active site motif
PLDc_2	PF13091	628 - 662	2.7e-06	PLD-like domain
PLDc	PF00614	630 - 655	2.8e-08	Phospholipase D Active site motif
PLD_C	PF12357	700 - 772	5e-30	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005265)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52570 AT1G52570 AT1G52570 AT3G15730
fragaria_vesca	FvH4_6g29920 FvH4_6g29920 FvH4_6g29920 FvH4_6g29920 FvH4_6g29920 FvH4_6g29920
malus_domestica	MD00G1090900.v1.1 MD17G1209200.v1.1
prunus_persica	Prupe.3G084800_v2.0.a1 Prupe.3G084800_v2.0.a1 Prupe.3G084800_v2.0.a1
pyrus_communis	pycom09g14080
rosa_chinensis	RchiOBHm_Chr2g0135901
rosa_laevigata	RLG00000019489
rosa_multiflora	Rmu_sc0001825.1_g000006 Rmu_sc0007848.1_g000004
rosa_roxburghii	Rroxscaffold_2G00108790
rosa_rugosa	Rorug02G0326700 Rorug02G0326700 Rorug02G0326700
rosa_samantha	Rh2AG378300 Rh2BG384800 Rh2CG364100 Rh2DG401200
rosa_wichuraiana	Rw2G030820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2223
Acc36I	ACCTGC	1 cut(s)	2223
AccB1I	GGYRCC	2 cut(s)	1973, 2309
AccB7I	CCANNNNNTGG	2 cut(s)	863, 2042
AciI	CCGC	1 cut(s)	382
AclWI	GGATC	4 cut(s)	964, 1751, 1764, 1948
AcoI	YGGCCR	2 cut(s)	783, 1637
AcsI	RAATTY	7 cut(s)	5, 300, 413, 510, 627, 1084, 2276
AcuI	CTGAAG	1 cut(s)	1383
AcvI	CACGTG	1 cut(s)	2042
AdeI	CACNNNGTG	1 cut(s)	609
AfaI	GTAC	5 cut(s)	252, 473, 1224, 1712, 2078
AfiI	CCNNNNNNNGG	9 cut(s)	329, 521, 639, 796, 863, 953, 1380, 1658, 2042
AflII	CTTAAG	1 cut(s)	1574
AflIII	ACRYGT	1 cut(s)	346
AgsI	TTSAA	9 cut(s)	35, 260, 272, 375, 1183, 1310, 2129, 2181, 2276
AjiI	CACGTC	1 cut(s)	829
AjnI	CCWGG	4 cut(s)	418, 661, 1505, 1976
AjuI	GAANNNNNNNTTGG	2 cut(s)	27, 59
AloI	GAACNNNNNNTCC	6 cut(s)	739, 771, 861, 893, 1163, 1195
AluBI	AGCT	9 cut(s)	355, 1234, 1243, 1337, 1379, 1497, 1514, 1567, 1865
AluI	AGCT	9 cut(s)	355, 1234, 1243, 1337, 1379, 1497, 1514, 1567, 1865
Alw21I	GWGCWC	3 cut(s)	175, 1867, 2085
Alw26I	GTCTC	3 cut(s)	32, 442, 1289
AlwI	GGATC	4 cut(s)	964, 1751, 1764, 1948
Ama87I	CYCGRG	1 cut(s)	2298
AoxI	GGCC	3 cut(s)	783, 1157, 1637
ApeKI	GCWGC	5 cut(s)	182, 355, 1337, 1370, 1511
ApoI	RAATTY	7 cut(s)	5, 300, 413, 510, 627, 1084, 2276
ArsI	GACNNNNNNTTYG	2 cut(s)	2238, 2270
AseI	ATTAAT	1 cut(s)	233
Asp700I	GAANNNNTTC	1 cut(s)	324
AspA2I	CCTAGG	1 cut(s)	1559
AspS9I	GGNCC	5 cut(s)	379, 1115, 1157, 1661, 2170
AsuC2I	CCSGG	4 cut(s)	1352, 1652, 2208, 2268
AsuHPI	GGTGA	3 cut(s)	695, 1813, 2204
AvaI	CYCGRG	1 cut(s)	2298
AvaII	GGWCC	4 cut(s)	379, 1115, 1661, 2170
AvrII	CCTAGG	1 cut(s)	1559
BaeGI	GKGCMC	1 cut(s)	889
BalI	TGGCCA	2 cut(s)	785, 1639
BamHI	GGATCC	1 cut(s)	1756
BanI	GGYRCC	2 cut(s)	1973, 2309
BanII	GRGCYC	2 cut(s)	543, 1867
BarI	GAAGNNNNNNTAC	2 cut(s)	1003, 1035
BbrPI	CACGTG	1 cut(s)	2042
BbsI	GAAGAC	1 cut(s)	1539
Bbv12I	GWGCWC	3 cut(s)	175, 1867, 2085
BbvI	GCAGC	5 cut(s)	169, 342, 1324, 1382, 1523
BceAI	ACGGC	1 cut(s)	1434
BciT130I	CCWGG	4 cut(s)	420, 663, 1507, 1978
BciVI	GTATCC	3 cut(s)	280, 1045, 1348
BcnI	CCSGG	4 cut(s)	1352, 1652, 2208, 2268
BcoDI	GTCTC	3 cut(s)	32, 442, 1289
BfaI	CTAG	4 cut(s)	99, 951, 1560, 2306
BfrI	CTTAAG	1 cut(s)	1574
BfuAI	ACCTGC	1 cut(s)	2223
BfuI	GTATCC	3 cut(s)	280, 1045, 1348
BisI	GCNGC	5 cut(s)	183, 356, 1338, 1371, 1512
BlnI	CCTAGG	1 cut(s)	1559
BlsI	GCNGC	5 cut(s)	184, 357, 1339, 1372, 1513
Bme1390I	CCNGG	8 cut(s)	420, 663, 1352, 1507, 1652, 1978, 2208, 2268
Bme18I	GGWCC	4 cut(s)	379, 1115, 1661, 2170
BmeT110I	CYCGRG	1 cut(s)	2298
BmgBI	CACGTC	1 cut(s)	829
BmgT120I	GGNCC	5 cut(s)	379, 1115, 1157, 1661, 2170
BmiI	GGNNCC	7 cut(s)	392, 1758, 1975, 2002, 2034, 2171, 2311
BmrFI	CCNGG	8 cut(s)	420, 663, 1352, 1507, 1652, 1978, 2208, 2268
BmrI	ACTGGG	2 cut(s)	615, 2176
BmsI	GCATC	5 cut(s)	236, 469, 559, 1357, 1417
BmuI	ACTGGG	2 cut(s)	615, 2176
BpiI	GAAGAC	1 cut(s)	1539
BpmI	CTGGAG	3 cut(s)	441, 543, 2096
Bpu10I	CCTNAGC	1 cut(s)	1866
BpuEI	CTTGAG	1 cut(s)	631
BpuMI	CCSGG	4 cut(s)	1352, 1652, 2208, 2268
BsaAI	YACGTR	1 cut(s)	2042
BsaBI	GATNNNNATC	2 cut(s)	599, 1074
BsaXI	ACNNNNNCTCC	2 cut(s)	382, 412
Bsc4I	CCNNNNNNNGG	9 cut(s)	329, 521, 639, 796, 863, 953, 1380, 1658, 2042
Bse1I	ACTGG	6 cut(s)	28, 610, 1096, 1664, 2171, 2196
Bse8I	GATNNNNATC	2 cut(s)	599, 1074
BseBI	CCWGG	4 cut(s)	420, 663, 1507, 1978
BseGI	GGATG	7 cut(s)	313, 461, 745, 1177, 1432, 1816, 1975
BseJI	GATNNNNATC	2 cut(s)	599, 1074
BseLI	CCNNNNNNNGG	9 cut(s)	329, 521, 639, 796, 863, 953, 1380, 1658, 2042
BseMII	CTCAG	2 cut(s)	1249, 1880
BseNI	ACTGG	6 cut(s)	28, 610, 1096, 1664, 2171, 2196
BseRI	GAGGAG	3 cut(s)	1347, 1705, 1766
BseSI	GKGCMC	1 cut(s)	889
BseXI	GCAGC	5 cut(s)	169, 342, 1324, 1382, 1523
BseYI	CCCAGC	1 cut(s)	1379
BsgI	GTGCAG	2 cut(s)	789, 1041
BshFI	GGCC	3 cut(s)	785, 1159, 1639
BshNI	GGYRCC	2 cut(s)	1973, 2309
BsiHKAI	GWGCWC	3 cut(s)	175, 1867, 2085
BsiHKCI	CYCGRG	1 cut(s)	2298
BsiSI	CCGG	4 cut(s)	1352, 1652, 2207, 2268
BslFI	GGGAC	6 cut(s)	321, 473, 656, 1613, 1994, 2183
BslI	CCNNNNNNNGG	9 cut(s)	329, 521, 639, 796, 863, 953, 1380, 1658, 2042
BsmAI	GTCTC	3 cut(s)	32, 442, 1289
BsmFI	GGGAC	6 cut(s)	321, 473, 656, 1613, 1994, 2183
BsmI	GAATGC	1 cut(s)	1419
BsnI	GGCC	3 cut(s)	785, 1159, 1639
BsoBI	CYCGRG	1 cut(s)	2298
Bsp1286I	GDGCHC	5 cut(s)	175, 543, 889, 1867, 2085
Bsp1407I	TGTACA	1 cut(s)	1710
Bsp19I	CCATGG	1 cut(s)	1995
BspACI	CCGC	1 cut(s)	382
BspANI	GGCC	3 cut(s)	785, 1159, 1639
BspCNI	CTCAG	2 cut(s)	1248, 1879
BspHI	TCATGA	2 cut(s)	1063, 1884
BspLI	GGNNCC	7 cut(s)	392, 1758, 1975, 2002, 2034, 2171, 2311
BspMI	ACCTGC	1 cut(s)	2223
BspPI	GGATC	4 cut(s)	964, 1751, 1764, 1948
BspT107I	GGYRCC	2 cut(s)	1973, 2309
BspTI	CTTAAG	1 cut(s)	1574
BsrGI	TGTACA	1 cut(s)	1710
BsrI	ACTGG	6 cut(s)	28, 610, 1096, 1664, 2171, 2196
BssT1I	CCWWGG	9 cut(s)	394, 633, 1127, 1559, 1760, 1786, 1995, 2086, 2292
Bst2UI	CCWGG	4 cut(s)	420, 663, 1507, 1978
Bst6I	CTCTTC	1 cut(s)	30
BstAFI	CTTAAG	1 cut(s)	1574
BstAUI	TGTACA	1 cut(s)	1710
BstBAI	YACGTR	1 cut(s)	2042
BstC8I	GCNNGC	3 cut(s)	1728, 2037, 2093
BstDEI	CTNAG	2 cut(s)	1235, 1866
BstDSI	CCRYGG	1 cut(s)	1995
BstEII	GGTNACC	1 cut(s)	2210
BstENI	CCTNNNNNAGG	1 cut(s)	637
BstF5I	GGATG	7 cut(s)	313, 461, 745, 1177, 1432, 1816, 1975
BstMAI	GTCTC	3 cut(s)	32, 442, 1289
BstMWI	GCNNNNNNNGC	7 cut(s)	179, 390, 1156, 1240, 1376, 1511, 2000
BstNI	CCWGG	4 cut(s)	420, 663, 1507, 1978
BstNSI	RCATGY	3 cut(s)	350, 1553, 2095
BstPI	GGTNACC	1 cut(s)	2210
BstSCI	CCNGG	8 cut(s)	418, 661, 1350, 1505, 1650, 1976, 2206, 2266
BstSLI	GKGCMC	1 cut(s)	889
BstV1I	GCAGC	5 cut(s)	169, 342, 1324, 1382, 1523
BstV2I	GAAGAC	1 cut(s)	1539
BstX2I	RGATCY	2 cut(s)	1756, 1940
BstYI	RGATCY	2 cut(s)	1756, 1940
BsuI	GTATCC	3 cut(s)	280, 1045, 1348
BsuRI	GGCC	3 cut(s)	785, 1159, 1639
BtgI	CCRYGG	1 cut(s)	1995
BtrI	CACGTC	1 cut(s)	829
BtsCI	GGATG	7 cut(s)	313, 461, 745, 1177, 1432, 1816, 1975
BtsIMutI	CAGTG	6 cut(s)	21, 198, 467, 603, 943, 2189
BveI	ACCTGC	1 cut(s)	2223
Cac8I	GCNNGC	3 cut(s)	1728, 2037, 2093
CciI	TCATGA	2 cut(s)	1063, 1884
Cfr13I	GGNCC	5 cut(s)	379, 1115, 1157, 1661, 2170
CseI	GACGC	1 cut(s)	1887
CsiI	ACCWGGT	1 cut(s)	661
Csp6I	GTAC	5 cut(s)	251, 472, 1223, 1711, 2077
CspCI	CAANNNNNGTGG	4 cut(s)	149, 184, 533, 568
CviQI	GTAC	5 cut(s)	251, 472, 1223, 1711, 2077
DdeI	CTNAG	2 cut(s)	1235, 1866
DraIII	CACNNNGTG	1 cut(s)	609
EaeI	YGGCCR	2 cut(s)	783, 1637
Eam1104I	CTCTTC	1 cut(s)	30
EarI	CTCTTC	1 cut(s)	30
Ecl136II	GAGCTC	1 cut(s)	1865
Eco130I	CCWWGG	9 cut(s)	394, 633, 1127, 1559, 1760, 1786, 1995, 2086, 2292
Eco24I	GRGCYC	2 cut(s)	543, 1867
Eco32I	GATATC	2 cut(s)	562, 673
Eco47I	GGWCC	4 cut(s)	379, 1115, 1661, 2170
Eco53kI	GAGCTC	1 cut(s)	1865
Eco57I	CTGAAG	1 cut(s)	1383
Eco72I	CACGTG	1 cut(s)	2042
Eco88I	CYCGRG	1 cut(s)	2298
Eco91I	GGTNACC	1 cut(s)	2210
EcoICRI	GAGCTC	1 cut(s)	1865
EcoNI	CCTNNNNNAGG	1 cut(s)	637
EcoO109I	RGGNCCY	2 cut(s)	1157, 2170
EcoO65I	GGTNACC	1 cut(s)	2210
EcoRI	GAATTC	1 cut(s)	2276
EcoRII	CCWGG	4 cut(s)	418, 661, 1505, 1976
EcoRV	GATATC	2 cut(s)	562, 673
EcoT14I	CCWWGG	9 cut(s)	394, 633, 1127, 1559, 1760, 1786, 1995, 2086, 2292
EcoT38I	GRGCYC	2 cut(s)	543, 1867
ErhI	CCWWGG	9 cut(s)	394, 633, 1127, 1559, 1760, 1786, 1995, 2086, 2292
FalI	AAGNNNNNCTT	4 cut(s)	1111, 1143, 1209, 1241
FaqI	GGGAC	6 cut(s)	321, 473, 656, 1613, 1994, 2183
Fnu4HI	GCNGC	5 cut(s)	183, 356, 1338, 1371, 1512
FokI	GGATG	7 cut(s)	320, 468, 752, 1184, 1439, 1823, 1982
FriOI	GRGCYC	2 cut(s)	543, 1867
Fsp4HI	GCNGC	5 cut(s)	183, 356, 1338, 1371, 1512
FspBI	CTAG	4 cut(s)	99, 951, 1560, 2306
GluI	GCNGC	5 cut(s)	183, 356, 1338, 1371, 1512
GsaI	CCCAGC	1 cut(s)	1383
GsuI	CTGGAG	3 cut(s)	441, 543, 2096
HaeIII	GGCC	3 cut(s)	785, 1159, 1639
HapII	CCGG	4 cut(s)	1352, 1652, 2207, 2268
HgaI	GACGC	1 cut(s)	1887
HincII	GTYRAC	2 cut(s)	1918, 2146
HindII	GTYRAC	2 cut(s)	1918, 2146
HpaI	GTTAAC	1 cut(s)	2146
HpaII	CCGG	4 cut(s)	1352, 1652, 2207, 2268
HphI	GGTGA	3 cut(s)	695, 1813, 2204
Hpy166II	GTNNAC	8 cut(s)	68, 832, 906, 934, 1611, 1713, 1918, 2146
Hpy188I	TCNGA	7 cut(s)	918, 1238, 1319, 1852, 1987, 2049, 2320
Hpy8I	GTNNAC	8 cut(s)	68, 832, 906, 934, 1611, 1713, 1918, 2146
Hpy99I	CGWCG	2 cut(s)	1881, 1925
HpyAV	CCTTC	7 cut(s)	266, 704, 1148, 1390, 1801, 2116, 2240
HpyCH4IV	ACGT	3 cut(s)	828, 2041, 2197
HpyF10VI	GCNNNNNNNGC	7 cut(s)	179, 390, 1156, 1240, 1376, 1511, 2000
HpyF3I	CTNAG	2 cut(s)	1235, 1866
HpySE526I	ACGT	3 cut(s)	828, 2041, 2197
KspAI	GTTAAC	1 cut(s)	2146
LmnI	GCTCC	6 cut(s)	224, 390, 1334, 1564, 2000, 2032
Lsp1109I	GCAGC	5 cut(s)	169, 342, 1324, 1382, 1523
LweI	GCATC	5 cut(s)	236, 469, 559, 1357, 1417
MabI	ACCWGGT	1 cut(s)	661
MaeI	CTAG	4 cut(s)	99, 951, 1560, 2306
MaeII	ACGT	3 cut(s)	828, 2041, 2197
MaeIII	GTNAC	5 cut(s)	463, 687, 2210, 2236, 2254
MfeI	CAATTG	1 cut(s)	1323
MflI	RGATCY	2 cut(s)	1756, 1940
MhlI	GDGCHC	5 cut(s)	175, 543, 889, 1867, 2085
MlsI	TGGCCA	2 cut(s)	785, 1639
MluNI	TGGCCA	2 cut(s)	785, 1639
MlyI	GAGTC	7 cut(s)	161, 218, 415, 638, 1664, 1976, 2111
MmeI	TCCRAC	2 cut(s)	368, 2212
Mox20I	TGGCCA	2 cut(s)	785, 1639
MroXI	GAANNNNTTC	1 cut(s)	324
MscI	TGGCCA	2 cut(s)	785, 1639
MseI	TTAA	7 cut(s)	233, 402, 693, 764, 1575, 1722, 2145
Msp20I	TGGCCA	2 cut(s)	785, 1639
MspA1I	CMGCKG	1 cut(s)	1514
MspCI	CTTAAG	1 cut(s)	1574
MspI	CCGG	4 cut(s)	1352, 1652, 2207, 2268
MspR9I	CCNGG	8 cut(s)	420, 663, 1352, 1507, 1652, 1978, 2208, 2268
MunI	CAATTG	1 cut(s)	1323
Mva1269I	GAATGC	1 cut(s)	1419
MvaI	CCWGG	4 cut(s)	420, 663, 1507, 1978
MwoI	GCNNNNNNNGC	7 cut(s)	179, 390, 1156, 1240, 1376, 1511, 2000
NciI	CCSGG	4 cut(s)	1352, 1652, 2208, 2268
NcoI	CCATGG	1 cut(s)	1995
NlaIV	GGNNCC	7 cut(s)	392, 1758, 1975, 2002, 2034, 2171, 2311
NmeAIII	GCCGAG	1 cut(s)	1126
NmuCI	GTSAC	2 cut(s)	2210, 2254
NspI	RCATGY	3 cut(s)	350, 1553, 2095
PaeI	GCATGC	1 cut(s)	2095
PaeR7I	CTCGAG	1 cut(s)	2298
PagI	TCATGA	2 cut(s)	1063, 1884
PaqCI	CACCTGC	1 cut(s)	2223
PciI	ACATGT	1 cut(s)	346
PctI	GAATGC	1 cut(s)	1419
PdmI	GAANNNNTTC	1 cut(s)	324
PfeI	GAWTC	6 cut(s)	1477, 1647, 1792, 1847, 1871, 2050
PflFI	GACNNNGTC	1 cut(s)	1250
PflMI	CCANNNNNTGG	2 cut(s)	863, 2042
PfoI	TCCNGGA	3 cut(s)	418, 1350, 1650
PkrI	GCNGC	5 cut(s)	184, 357, 1339, 1372, 1513
PleI	GAGTC	7 cut(s)	160, 217, 414, 638, 1663, 1976, 2110
PmaCI	CACGTG	1 cut(s)	2042
PmlI	CACGTG	1 cut(s)	2042
PpsI	GAGTC	7 cut(s)	160, 217, 414, 638, 1663, 1976, 2110
Ppu21I	YACGTR	1 cut(s)	2042
PpuMI	RGGWCCY	1 cut(s)	2170
PscI	ACATGT	1 cut(s)	346
PshBI	ATTAAT	1 cut(s)	233
Psp124BI	GAGCTC	1 cut(s)	1867
Psp5II	RGGWCCY	1 cut(s)	2170
Psp6I	CCWGG	4 cut(s)	418, 661, 1505, 1976
PspCI	CACGTG	1 cut(s)	2042
PspEI	GGTNACC	1 cut(s)	2210
PspFI	CCCAGC	1 cut(s)	1379
PspGI	CCWGG	4 cut(s)	418, 661, 1505, 1976
PspN4I	GGNNCC	7 cut(s)	392, 1758, 1975, 2002, 2034, 2171, 2311
PspPI	GGNCC	5 cut(s)	379, 1115, 1157, 1661, 2170
PspPPI	RGGWCCY	1 cut(s)	2170
PspXI	VCTCGAGB	1 cut(s)	2298
PsuI	RGATCY	2 cut(s)	1756, 1940
PsyI	GACNNNGTC	1 cut(s)	1250
PvuII	CAGCTG	1 cut(s)	1514
RsaI	GTAC	5 cut(s)	252, 473, 1224, 1712, 2078
RsaNI	GTAC	5 cut(s)	251, 472, 1223, 1711, 2077
SacI	GAGCTC	1 cut(s)	1867
SaqAI	TTAA	7 cut(s)	233, 402, 693, 764, 1575, 1722, 2145
SatI	GCNGC	5 cut(s)	183, 356, 1338, 1371, 1512
Sau96I	GGNCC	5 cut(s)	379, 1115, 1157, 1661, 2170
SchI	GAGTC	7 cut(s)	161, 218, 415, 638, 1664, 1976, 2111
ScrFI	CCNGG	8 cut(s)	420, 663, 1352, 1507, 1652, 1978, 2208, 2268
SduI	GDGCHC	5 cut(s)	175, 543, 889, 1867, 2085
SexAI	ACCWGGT	1 cut(s)	661
SfaNI	GCATC	5 cut(s)	236, 469, 559, 1357, 1417
Sfr274I	CTCGAG	1 cut(s)	2298
SinI	GGWCC	4 cut(s)	379, 1115, 1661, 2170
SlaI	CTCGAG	1 cut(s)	2298
SmlI	CTYRAG	3 cut(s)	646, 1574, 2298
SmoI	CTYRAG	3 cut(s)	646, 1574, 2298
SphI	GCATGC	1 cut(s)	2095
SsiI	CCGC	1 cut(s)	382
SspI	AATATT	1 cut(s)	1677
SspMI	CTAG	4 cut(s)	99, 951, 1560, 2306
SstI	GAGCTC	1 cut(s)	1867
StyD4I	CCNGG	8 cut(s)	418, 661, 1350, 1505, 1650, 1976, 2206, 2266
StyI	CCWWGG	9 cut(s)	394, 633, 1127, 1559, 1760, 1786, 1995, 2086, 2292
TaiI	ACGT	3 cut(s)	831, 2044, 2200
TaqI	TCGA	2 cut(s)	1414, 2299
TatI	WGTACW	2 cut(s)	1222, 1710
TfiI	GAWTC	6 cut(s)	1477, 1647, 1792, 1847, 1871, 2050
Tru1I	TTAA	7 cut(s)	233, 402, 693, 764, 1575, 1722, 2145
Tru9I	TTAA	7 cut(s)	233, 402, 693, 764, 1575, 1722, 2145
TscAI	CASTG	6 cut(s)	28, 205, 474, 610, 943, 2196
TseFI	GTSAC	2 cut(s)	2210, 2254
TseI	GCWGC	5 cut(s)	182, 355, 1337, 1370, 1511
Tsp45I	GTSAC	2 cut(s)	2210, 2254
TspDTI	ATGAA	8 cut(s)	17, 317, 356, 1453, 1836, 1873, 1886, 2042
TspGWI	ACGGA	3 cut(s)	707, 2051, 2273
TspRI	CASTG	6 cut(s)	28, 205, 474, 610, 943, 2196
Tth111I	GACNNNGTC	1 cut(s)	1250
Van91I	CCANNNNNTGG	2 cut(s)	863, 2042
Vha464I	CTTAAG	1 cut(s)	1574
VpaK11BI	GGWCC	4 cut(s)	379, 1115, 1661, 2170
VspI	ATTAAT	1 cut(s)	233
XagI	CCTNNNNNAGG	1 cut(s)	637
XapI	RAATTY	7 cut(s)	5, 300, 413, 510, 627, 1084, 2276
XceI	RCATGY	3 cut(s)	350, 1553, 2095
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1125
XhoI	CTCGAG	1 cut(s)	2298
XmaJI	CCTAGG	1 cut(s)	1559
XmnI	GAANNNNTTC	1 cut(s)	324
XspI	CTAG	4 cut(s)	99, 951, 1560, 2306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.