Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0016495

Physical Location & Seq

Genomic Coordinates Forward (+)

84685316 .. 84688877

Gene Structure 3562 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGAGTAGATCCATCACCACGCCGGTCAAATTCCGCCCTCTCCAGAACCCTAGCGGCGACGGCTCCACCTCGGCCGCCGTAGTAGACGAGCACTCGCTCCACATTCTATGGCGCCACAAGATTCTCGACCCCGACTCGGACCTGGTATCCCTCTGGCACCACATCTTCCTCGTCATCTGCATCGCTGCGCTCTTCATCGACCCTCTCTACTTCTACCTCCCCTTCGTCGGCGGCGAGGGCTGCCTCTCCACCGACCACCGCCTCGCCGTCATCGTCACCTTCTTCCGCTCCATCGCCGACCTCTTCTACCTGTTGCACATGATCGTCAAGTTCCGCACCGCATTCATCGCCCCCAGCTCTAGGGTTTTCGGCCGCGGCGATCTCGTCATGGACGGCAGACAGATCGCCATGCGGTATCTCAAGTCCGACTTCGTGGTCGATCTGGCTGCCACTCTTCCAATTCCGCAGATTGTTATCTGGCTGGTGATTCCAGCAACGAACAATGCGGGCGTTGATCATGCCAACAACACTCTGGCCCTTTTCGTGCTTATTCAATATATTCCTAGACTATTTCTCATATTTCCTTTGAATCAGAAAATCGTGAAGACTACTGGGGTTGTAGCCAAGACTCCCTGGGCAGGAGCTGCGTACAATTTGCTTCTTTTCATGCTAGCCAGTCATATATTTGGAGCCGTTTGGTATCTATGTGCCATAGGGCGGCAATTTGAATGTTGGAAAACGGAGTGTAGTGAAGAGAATACAAAAGTTGTGACTTGCCTCTATAGTTTCCTGGATTGCAAGAGTTTGGACCTACCAGAACGGGAATCTTGGGCAAACGCCACCAAAGTGATAAAAAAGTGTGATGCCTCTGATAAAAATGCTGATTTTAAGTTTGGAATCTTTGACAAAGCATTTAAGACTGAGGCTGCAAAGACGAACTTTTTTGAGAAGTACTTGTTTTGTTTCTGGTGGGGGTTAAGAAACTTATGCTCATACGGGCAGACTTTGATGACGAGCACATATCTTGGCGAGACATTGTTTTCCATTGTCTTGTGCATTTCTGGTTTGATTCTGTTCTCACTATTGATTGGCAACATGCAGACTTATCTGCAATCAATGTCAATAAAAATCGAAGAATGGAGAATTAAGCAAAGAGATACTGATGAGTGGATGAGGCATCGCCAGTTACCTGAACCCTTGCAAGAACGTGTTCGTAGATTTATGCAATACAAATGGTTTGCAACACGAGGAGTTGATGAAGAATCCATCTTGCATTCATTACCCATCGACCTCTGCCATGAAATCCAGCAGCACTTATGCCTTTCCCTTGTTCGCCGTGTCCCTTTTTTCTCACAAATGGATGACCAGCTTCTTGATGCCATATGTGAGCGTCTTGTGTCATCCTTGACTATCAAAGGAACATATATAGTTCAAGAAGGCGACCCAGTAAATGAGATGCTCTTTATTATCAGAGGGAAACTTGAGAGCTCCACAACCAATGGAGGGAGGACTGGCTTCTTTAACTCCATCAATCTAGGACCTGGTGACTTCTGTGGTGAGGAACTATTGACATGGGCATTGATGCCAAGCTCTAGCATTAGCATGCCTTCTTCCACTCGGACTGTGAGAGCCCTCACTGAAGTTGAAGCTTTTGCGCTTCGAGCTGAGGACCTTAAGTTTGTTGCAAGTCAGTTCAAACGCCTTCACAGCAAGAAACTACAGCATGCCTTTAGGTACTATTCTCACCAATGGAGGACATGGGGTGCTTGCTTCATACAAGCTGCTTGGAGAAGGTTTAAGAAGAGGAAGATGGCAAGGGACTTGGCTATGCAGGAGGGCTTATACTATTTGCATGTACCCGGCCAAGAGGAAGAGGGTTACTACTACGACAACGAAGAACAAACAAATCTTGTAAACTATGACGGTGAGAGTGGTGATAGGTCATCGACAGGGGAGAAGTTAAGCACTTCCATGAATCTTGGGGCCACATTTCTGGCTTCTAAATTTGCTGCAAATACAAGAAAAGGGATTGTGCAGAAAGCTCAGCTGGTTGATCCTGATTCAACTAGTTTGCAGATGCCTCGGATGTTTAAGCCAGATGAGCCTGATTTTTCTGTAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005262 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0008150 GO:0008324 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015085 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016043 GO:0016049 GO:0016324 GO:0019725 GO:0022414 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0034220 GO:0040007 GO:0042391 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0046873 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051704 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055085 GO:0060560 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071804 GO:0071805 GO:0071840 GO:0071944 GO:0072503 GO:0072507 GO:0072511 GO:0098590 GO:0098655 GO:0098660 GO:0098662 GO:0098771

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

707

Amino Acids

80.82

Weight (kDa)

7.54

Isoelectric Point (pI)

39.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	51 - 373	1.1e-21	Ion transport protein
cNMP_binding	PF00027	472 - 561	1.2e-09	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016495)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14870
fragaria_vesca	FvH4_6g50510
malus_domestica	MD09G1035800.v1.1 MD17G1037400.v1.1
prunus_persica	Prupe.3G282200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0170931
rosa_laevigata	RLG00000021993
rosa_multiflora	Rmu_sc0025148.1_g000002
rosa_roxburghii	Rroxscaffold_2G00080970
rosa_rugosa	Rorug02G0552400
rosa_samantha	Rh2BG636000 Rh2CG604500 Rh2DG647600
rosa_wichuraiana	Rw2G051780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	434
AccB1I	GGYRCC	2 cut(s)	111, 156
AccBSI	CCGCTC	1 cut(s)	288
AccI	GTMKAC	1 cut(s)	84
AccII	CGCG	1 cut(s)	375
AclWI	GGATC	2 cut(s)	3, 2048
AcoI	YGGCCR	3 cut(s)	72, 370, 1861
AcsI	RAATTY	2 cut(s)	29, 2003
AcuI	CTGAAG	1 cut(s)	1659
AcyI	GRCGYC	1 cut(s)	112
AfaI	GTAC	4 cut(s)	650, 953, 1736, 1857
AfiI	CCNNNNNNNGG	6 cut(s)	136, 227, 360, 638, 717, 1503
AflII	CTTAAG	1 cut(s)	1673
AflIII	ACRYGT	1 cut(s)	1207
AgsI	TTSAA	7 cut(s)	554, 589, 728, 1433, 1646, 1696, 2064
AhlI	ACTAGT	1 cut(s)	2066
AjnI	CCWGG	4 cut(s)	141, 632, 789, 1540
AleI	CACNNNNGTG	1 cut(s)	845
Alw21I	GWGCWC	3 cut(s)	93, 1019, 1490
Alw26I	GTCTC	1 cut(s)	1025
AlwI	GGATC	2 cut(s)	3, 2048
AlwNI	CAGNNNCTG	1 cut(s)	644
AoxI	GGCC	5 cut(s)	72, 370, 534, 1861, 1983
ApeKI	GCWGC	8 cut(s)	185, 240, 446, 644, 926, 1309, 1781, 2009
ApoI	RAATTY	2 cut(s)	29, 2003
ArsI	GACNNNNNNTTYG	2 cut(s)	1661, 1693
Asp700I	GAANNNNTTC	1 cut(s)	1209
AspLEI	GCGC	3 cut(s)	114, 190, 1657
AspS9I	GGNCC	6 cut(s)	139, 535, 808, 1538, 1669, 1983
AsuC2I	CCSGG	1 cut(s)	1860
AsuHPI	GGTGA	8 cut(s)	7, 268, 496, 1556, 1568, 1736, 1937, 1946
AsuNHI	GCTAGC	1 cut(s)	670
AvaII	GGWCC	4 cut(s)	139, 808, 1538, 1669
BanI	GGYRCC	2 cut(s)	111, 156
BanII	GRGCYC	2 cut(s)	1490, 1633
BauI	CACGAG	1 cut(s)	1245
BbsI	GAAGAC	1 cut(s)	611
Bbv12I	GWGCWC	3 cut(s)	93, 1019, 1490
BbvCI	CCTCAGC	1 cut(s)	1665
BbvI	GCAGC	8 cut(s)	172, 227, 433, 631, 913, 1321, 1768, 1996
BccI	CCATC	6 cut(s)	20, 299, 1274, 1292, 1535, 1804
BceAI	ACGGC	6 cut(s)	62, 76, 251, 409, 677, 1320
BcgI	CGANNNNNNTGC	6 cut(s)	385, 419, 428, 462, 2063, 2097
BciT130I	CCWGG	4 cut(s)	143, 634, 791, 1542
BciVI	GTATCC	1 cut(s)	157
BclI	TGATCA	1 cut(s)	514
BcnI	CCSGG	1 cut(s)	1860
BcoDI	GTCTC	1 cut(s)	1025
BcuI	ACTAGT	1 cut(s)	2066
BfaI	CTAG	7 cut(s)	51, 360, 564, 671, 1535, 1593, 2067
BfmI	CTRYAG	3 cut(s)	781, 1718, 2115
BfoI	RGCGCY	1 cut(s)	115
BfrI	CTTAAG	1 cut(s)	1673
BfuI	GTATCC	1 cut(s)	157
BlpI	GCTNAGC	1 cut(s)	2043
BmcAI	AGTACT	1 cut(s)	953
Bme1390I	CCNGG	5 cut(s)	143, 634, 791, 1542, 1860
Bme18I	GGWCC	4 cut(s)	139, 808, 1538, 1669
BmgT120I	GGNCC	6 cut(s)	139, 535, 808, 1538, 1669, 1983
BmiI	GGNNCC	5 cut(s)	64, 113, 158, 691, 1984
BmrFI	CCNGG	5 cut(s)	143, 634, 791, 1542, 1860
BmrI	ACTGGG	2 cut(s)	621, 1439
BmsI	GCATC	7 cut(s)	189, 853, 1186, 1366, 1446, 1572, 2067
BmtI	GCTAGC	1 cut(s)	674
BmuI	ACTGGG	2 cut(s)	621, 1439
BpiI	GAAGAC	1 cut(s)	611
BpmI	CTGGAG	1 cut(s)	26
Bpu10I	CCTNAGC	1 cut(s)	1665
Bpu1102I	GCTNAGC	1 cut(s)	2043
BpuEI	CTTGAG	2 cut(s)	404, 1502
BpuMI	CCSGG	1 cut(s)	1860
BsaBI	GATNNNNATC	1 cut(s)	473
BsaHI	GRCGYC	1 cut(s)	112
BsaJI	CCNNGG	5 cut(s)	69, 373, 632, 633, 2081
Bsc4I	CCNNNNNNNGG	6 cut(s)	136, 227, 360, 638, 717, 1503
Bse118I	RCCGGY	1 cut(s)	22
Bse1I	ACTGG	5 cut(s)	616, 675, 1183, 1445, 1516
Bse8I	GATNNNNATC	1 cut(s)	473
BseBI	CCWGG	4 cut(s)	143, 634, 791, 1542
BseDI	CCNNGG	5 cut(s)	69, 373, 632, 633, 2081
BseGI	GGATG	4 cut(s)	1176, 1366, 1400, 2091
BseJI	GATNNNNATC	1 cut(s)	473
BseLI	CCNNNNNNNGG	6 cut(s)	136, 227, 360, 638, 717, 1503
BseMII	CTCAG	3 cut(s)	912, 1656, 2057
BseNI	ACTGG	5 cut(s)	616, 675, 1183, 1445, 1516
BseRI	GAGGAG	1 cut(s)	1263
BseX3I	CGGCCG	2 cut(s)	72, 370
BseXI	GCAGC	8 cut(s)	172, 227, 433, 631, 913, 1321, 1768, 1996
BseYI	CCCAGC	1 cut(s)	353
BsgI	GTGCAG	1 cut(s)	2054
Bsh1236I	CGCG	1 cut(s)	375
Bsh1285I	CGRYCG	2 cut(s)	75, 373
BshFI	GGCC	5 cut(s)	74, 372, 536, 1863, 1985
BshNI	GGYRCC	2 cut(s)	111, 156
BsiEI	CGRYCG	2 cut(s)	75, 373
BsiHKAI	GWGCWC	3 cut(s)	93, 1019, 1490
BsiSI	CCGG	2 cut(s)	23, 1860
BslFI	GGGAC	2 cut(s)	1325, 1832
BslI	CCNNNNNNNGG	6 cut(s)	136, 227, 360, 638, 717, 1503
BsmAI	GTCTC	1 cut(s)	1025
BsmFI	GGGAC	2 cut(s)	1325, 1832
BsmI	GAATGC	2 cut(s)	341, 1273
BsnI	GGCC	5 cut(s)	74, 372, 536, 1863, 1985
Bsp1286I	GDGCHC	4 cut(s)	93, 1019, 1490, 1633
Bsp143I	GATC	7 cut(s)	8, 321, 379, 402, 439, 514, 2053
Bsp1720I	GCTNAGC	1 cut(s)	2043
BspANI	GGCC	5 cut(s)	74, 372, 536, 1863, 1985
BspCNI	CTCAG	3 cut(s)	913, 1657, 2056
BspFNI	CGCG	1 cut(s)	375
BspLI	GGNNCC	5 cut(s)	64, 113, 158, 691, 1984
BspOI	GCTAGC	1 cut(s)	674
BspPI	GGATC	2 cut(s)	3, 2048
BspQI	GCTCTTC	1 cut(s)	197
BspT107I	GGYRCC	2 cut(s)	111, 156
BspTI	CTTAAG	1 cut(s)	1673
BsrBI	CCGCTC	1 cut(s)	288
BsrFI	RCCGGY	1 cut(s)	22
BsrI	ACTGG	5 cut(s)	616, 675, 1183, 1445, 1516
BssAI	RCCGGY	1 cut(s)	22
BssECI	CCNNGG	5 cut(s)	69, 373, 632, 633, 2081
BssMI	GATC	7 cut(s)	8, 321, 379, 402, 439, 514, 2053
BssNI	GRCGYC	1 cut(s)	112
BssSI	CACGAG	1 cut(s)	1245
Bst2BI	CACGAG	1 cut(s)	1245
Bst2UI	CCWGG	4 cut(s)	143, 634, 791, 1542
Bst4CI	ACNGT	2 cut(s)	1624, 1925
Bst6I	CTCTTC	6 cut(s)	197, 308, 459, 747, 1796, 1866
BstACI	GRCGYC	1 cut(s)	112
BstAFI	CTTAAG	1 cut(s)	1673
BstAPI	GCANNNNNTGC	1 cut(s)	644
BstC8I	GCNNGC	5 cut(s)	508, 672, 1604, 1725, 1768
BstDEI	CTNAG	3 cut(s)	921, 1665, 2043
BstDSI	CCRYGG	1 cut(s)	373
BstF5I	GGATG	4 cut(s)	1176, 1366, 1400, 2091
BstFNI	CGCG	1 cut(s)	375
BstH2I	RGCGCY	1 cut(s)	115
BstHHI	GCGC	3 cut(s)	114, 190, 1657
BstKTI	GATC	7 cut(s)	11, 324, 382, 405, 442, 517, 2056
BstMAI	GTCTC	1 cut(s)	1025
BstMBI	GATC	7 cut(s)	8, 321, 379, 402, 439, 514, 2053
BstMCI	CGRYCG	2 cut(s)	75, 373
BstMWI	GCNNNNNNNGC	8 cut(s)	60, 237, 240, 347, 644, 1661, 1707, 2101
BstNI	CCWGG	4 cut(s)	143, 634, 791, 1542
BstNSI	RCATGY	4 cut(s)	1099, 1606, 1727, 1856
BstSCI	CCNGG	5 cut(s)	141, 632, 789, 1540, 1858
BstSFI	CTRYAG	3 cut(s)	781, 1718, 2115
BstUI	CGCG	1 cut(s)	375
BstV1I	GCAGC	8 cut(s)	172, 227, 433, 631, 913, 1321, 1768, 1996
BstV2I	GAAGAC	1 cut(s)	611
BstX2I	RGATCY	1 cut(s)	8
BstXI	CCANNNNNNTGG	1 cut(s)	1993
BstYI	RGATCY	1 cut(s)	8
BstZI	CGGCCG	2 cut(s)	72, 370
BsuI	GTATCC	1 cut(s)	157
BsuRI	GGCC	5 cut(s)	74, 372, 536, 1863, 1985
BtgI	CCRYGG	1 cut(s)	373
BtgZI	GCGATG	4 cut(s)	166, 277, 331, 1163
BtsCI	GGATG	4 cut(s)	1176, 1366, 1400, 2091
BtsIMutI	CAGTG	1 cut(s)	1635
Cac8I	GCNNGC	5 cut(s)	508, 672, 1604, 1725, 1768
CaiI	CAGNNNCTG	1 cut(s)	644
CfoI	GCGC	3 cut(s)	114, 190, 1657
Cfr10I	RCCGGY	1 cut(s)	22
Cfr13I	GGNCC	6 cut(s)	139, 535, 808, 1538, 1669, 1983
Cfr42I	CCGCGG	1 cut(s)	376
CseI	GACGC	1 cut(s)	1379
CsiI	ACCWGGT	2 cut(s)	141, 1540
Csp6I	GTAC	4 cut(s)	649, 952, 1735, 1856
CviQI	GTAC	4 cut(s)	649, 952, 1735, 1856
DdeI	CTNAG	3 cut(s)	921, 1665, 2043
DinI	GGCGCC	1 cut(s)	113
DpnI	GATC	7 cut(s)	10, 323, 381, 404, 441, 516, 2055
DpnII	GATC	7 cut(s)	8, 321, 379, 402, 439, 514, 2053
DrdI	GACNNNNNNGTC	1 cut(s)	434
DseDI	GACNNNNNNGTC	1 cut(s)	434
EaeI	YGGCCR	3 cut(s)	72, 370, 1861
EagI	CGGCCG	2 cut(s)	72, 370
Eam1104I	CTCTTC	6 cut(s)	197, 308, 459, 747, 1796, 1866
EarI	CTCTTC	6 cut(s)	197, 308, 459, 747, 1796, 1866
EciI	GGCGGA	1 cut(s)	23
Ecl136II	GAGCTC	1 cut(s)	1488
EclXI	CGGCCG	2 cut(s)	72, 370
Eco24I	GRGCYC	2 cut(s)	1490, 1633
Eco47I	GGWCC	4 cut(s)	139, 808, 1538, 1669
Eco52I	CGGCCG	2 cut(s)	72, 370
Eco53kI	GAGCTC	1 cut(s)	1488
Eco57I	CTGAAG	1 cut(s)	1659
EcoICRI	GAGCTC	1 cut(s)	1488
EcoO109I	RGGNCCY	2 cut(s)	1538, 1669
EcoRII	CCWGG	4 cut(s)	141, 632, 789, 1540
EcoT38I	GRGCYC	2 cut(s)	1490, 1633
EgeI	GGCGCC	1 cut(s)	113
EheI	GGCGCC	1 cut(s)	113
FalI	AAGNNNNNCTT	4 cut(s)	413, 445, 923, 955
FaqI	GGGAC	2 cut(s)	1325, 1832
FauI	CCCGC	1 cut(s)	499
FauNDI	CATATG	1 cut(s)	1382
FbaI	TGATCA	1 cut(s)	514
FblI	GTMKAC	1 cut(s)	84
FokI	GGATG	4 cut(s)	1183, 1373, 1387, 2098
FriOI	GRGCYC	2 cut(s)	1490, 1633
FspBI	CTAG	7 cut(s)	51, 360, 564, 671, 1535, 1593, 2067
GlaI	GCGC	3 cut(s)	113, 189, 1656
GsaI	CCCAGC	1 cut(s)	357
GsuI	CTGGAG	1 cut(s)	26
HaeII	RGCGCY	1 cut(s)	115
HaeIII	GGCC	5 cut(s)	74, 372, 536, 1863, 1985
HapII	CCGG	2 cut(s)	23, 1860
HgaI	GACGC	1 cut(s)	1379
HhaI	GCGC	3 cut(s)	114, 190, 1657
Hin1I	GRCGYC	1 cut(s)	112
Hin6I	GCGC	3 cut(s)	112, 188, 1655
HinP1I	GCGC	3 cut(s)	112, 188, 1655
HindIII	AAGCTT	1 cut(s)	1647
HpaII	CCGG	2 cut(s)	23, 1860
HphI	GGTGA	8 cut(s)	7, 268, 496, 1556, 1568, 1736, 1937, 1946
Hpy166II	GTNNAC	2 cut(s)	85, 1915
Hpy188I	TCNGA	7 cut(s)	139, 427, 594, 871, 1472, 1620, 2085
Hpy188III	TCNNGA	6 cut(s)	43, 125, 601, 1373, 1433, 2057
Hpy8I	GTNNAC	2 cut(s)	85, 1915
Hpy99I	CGWCG	2 cut(s)	62, 230
HpyAV	CCTTC	6 cut(s)	232, 289, 1430, 1617, 1712, 1785
HpyCH4III	ACNGT	2 cut(s)	1624, 1925
HpyCH4IV	ACGT	1 cut(s)	1207
HpyF10VI	GCNNNNNNNGC	8 cut(s)	60, 237, 240, 347, 644, 1661, 1707, 2101
HpyF3I	CTNAG	3 cut(s)	921, 1665, 2043
HpySE526I	ACGT	1 cut(s)	1207
Hsp92I	GRCGYC	1 cut(s)	112
HspAI	GCGC	3 cut(s)	112, 188, 1655
KasI	GGCGCC	1 cut(s)	111
Ksp22I	TGATCA	1 cut(s)	514
KspI	CCGCGG	1 cut(s)	376
Kzo9I	GATC	7 cut(s)	8, 321, 379, 402, 439, 514, 2053
LguI	GCTCTTC	1 cut(s)	197
LmnI	GCTCC	6 cut(s)	68, 102, 293, 641, 689, 1493
Lsp1109I	GCAGC	8 cut(s)	172, 227, 433, 631, 913, 1321, 1768, 1996
LweI	GCATC	7 cut(s)	189, 853, 1186, 1366, 1446, 1572, 2067
MabI	ACCWGGT	2 cut(s)	141, 1540
MaeI	CTAG	7 cut(s)	51, 360, 564, 671, 1535, 1593, 2067
MaeII	ACGT	1 cut(s)	1207
MaeIII	GTNAC	5 cut(s)	274, 769, 1185, 1544, 1877
MalI	GATC	7 cut(s)	10, 323, 381, 404, 441, 516, 2055
MbiI	CCGCTC	1 cut(s)	288
MboI	GATC	7 cut(s)	8, 321, 379, 402, 439, 514, 2053
MflI	RGATCY	1 cut(s)	8
MhlI	GDGCHC	4 cut(s)	93, 1019, 1490, 1633
MluCI	AATT	6 cut(s)	29, 459, 652, 722, 1143, 2003
Mly113I	GGCGCC	1 cut(s)	112
MlyI	GAGTC	2 cut(s)	128, 622
MmeI	TCCRAC	2 cut(s)	450, 713
MroXI	GAANNNNTTC	1 cut(s)	1209
MseI	TTAA	9 cut(s)	888, 915, 977, 1146, 1521, 1674, 1797, 1961, 2091
MslI	CAYNNNNRTG	3 cut(s)	845, 1601, 1970
MspA1I	CMGCKG	2 cut(s)	375, 2047
MspCI	CTTAAG	1 cut(s)	1673
MspI	CCGG	2 cut(s)	23, 1860
MspR9I	CCNGG	5 cut(s)	143, 634, 791, 1542, 1860
Mva1269I	GAATGC	2 cut(s)	341, 1273
MvaI	CCWGG	4 cut(s)	143, 634, 791, 1542
MvnI	CGCG	1 cut(s)	375
MwoI	GCNNNNNNNGC	8 cut(s)	60, 237, 240, 347, 644, 1661, 1707, 2101
NarI	GGCGCC	1 cut(s)	112
NciI	CCSGG	1 cut(s)	1860
NdeI	CATATG	1 cut(s)	1382
NdeII	GATC	7 cut(s)	8, 321, 379, 402, 439, 514, 2053
NheI	GCTAGC	1 cut(s)	670
NlaIV	GGNNCC	5 cut(s)	64, 113, 158, 691, 1984
NmeAIII	GCCGAG	1 cut(s)	50
NmuCI	GTSAC	3 cut(s)	274, 769, 1544
NspI	RCATGY	4 cut(s)	1099, 1606, 1727, 1856
OliI	CACNNNNGTG	1 cut(s)	845
PaeI	GCATGC	2 cut(s)	1606, 1727
PasI	CCCWGGG	1 cut(s)	633
PciSI	GCTCTTC	1 cut(s)	197
PcsI	WCGNNNNNNNCGW	3 cut(s)	231, 270, 375
PctI	GAATGC	2 cut(s)	341, 1273
PdmI	GAANNNNTTC	1 cut(s)	1209
PfeI	GAWTC	9 cut(s)	121, 487, 589, 824, 897, 1069, 1262, 1975, 2060
PfoI	TCCNGGA	1 cut(s)	789
PleI	GAGTC	2 cut(s)	128, 622
PluTI	GGCGCC	1 cut(s)	115
PpsI	GAGTC	2 cut(s)	128, 622
PpuMI	RGGWCCY	2 cut(s)	1538, 1669
Psp124BI	GAGCTC	1 cut(s)	1490
Psp5II	RGGWCCY	2 cut(s)	1538, 1669
Psp6I	CCWGG	4 cut(s)	141, 632, 789, 1540
PspFI	CCCAGC	1 cut(s)	353
PspGI	CCWGG	4 cut(s)	141, 632, 789, 1540
PspN4I	GGNNCC	5 cut(s)	64, 113, 158, 691, 1984
PspPI	GGNCC	6 cut(s)	139, 535, 808, 1538, 1669, 1983
PspPPI	RGGWCCY	2 cut(s)	1538, 1669
PstNI	CAGNNNCTG	1 cut(s)	644
PsuI	RGATCY	1 cut(s)	8
PvuII	CAGCTG	1 cut(s)	2047
RsaI	GTAC	4 cut(s)	650, 953, 1736, 1857
RsaNI	GTAC	4 cut(s)	649, 952, 1735, 1856
RseI	CAYNNNNRTG	3 cut(s)	845, 1601, 1970
SacI	GAGCTC	1 cut(s)	1490
SacII	CCGCGG	1 cut(s)	376
SapI	GCTCTTC	1 cut(s)	197
SaqAI	TTAA	9 cut(s)	888, 915, 977, 1146, 1521, 1674, 1797, 1961, 2091
Sau3AI	GATC	7 cut(s)	8, 321, 379, 402, 439, 514, 2053
Sau96I	GGNCC	6 cut(s)	139, 535, 808, 1538, 1669, 1983
ScaI	AGTACT	1 cut(s)	953
SchI	GAGTC	2 cut(s)	128, 622
ScrFI	CCNGG	5 cut(s)	143, 634, 791, 1542, 1860
SduI	GDGCHC	4 cut(s)	93, 1019, 1490, 1633
SexAI	ACCWGGT	2 cut(s)	141, 1540
SfaNI	GCATC	7 cut(s)	189, 853, 1186, 1366, 1446, 1572, 2067
SfcI	CTRYAG	3 cut(s)	781, 1718, 2115
SfoI	GGCGCC	1 cut(s)	113
Sfr303I	CCGCGG	1 cut(s)	376
SgrBI	CCGCGG	1 cut(s)	376
SinI	GGWCC	4 cut(s)	139, 808, 1538, 1669
SmiMI	CAYNNNNRTG	3 cut(s)	845, 1601, 1970
SmlI	CTYRAG	3 cut(s)	419, 1481, 1673
SmoI	CTYRAG	3 cut(s)	419, 1481, 1673
SpeI	ACTAGT	1 cut(s)	2066
SphI	GCATGC	2 cut(s)	1606, 1727
Sse9I	AATT	6 cut(s)	29, 459, 652, 722, 1143, 2003
SspDI	GGCGCC	1 cut(s)	111
SspMI	CTAG	7 cut(s)	51, 360, 564, 671, 1535, 1593, 2067
SstI	GAGCTC	1 cut(s)	1490
StyD4I	CCNGG	5 cut(s)	141, 632, 789, 1540, 1858
TaaI	ACNGT	2 cut(s)	1624, 1925
TaiI	ACGT	1 cut(s)	1210
TaqI	TCGA	7 cut(s)	126, 198, 438, 1131, 1287, 1660, 1946
TasI	AATT	6 cut(s)	29, 459, 652, 722, 1143, 2003
TatI	WGTACW	1 cut(s)	951
TauI	GCSGC	6 cut(s)	57, 77, 234, 375, 378, 721
TfiI	GAWTC	9 cut(s)	121, 487, 589, 824, 897, 1069, 1262, 1975, 2060
Tru1I	TTAA	9 cut(s)	888, 915, 977, 1146, 1521, 1674, 1797, 1961, 2091
Tru9I	TTAA	9 cut(s)	888, 915, 977, 1146, 1521, 1674, 1797, 1961, 2091
TscAI	CASTG	1 cut(s)	1642
TseFI	GTSAC	3 cut(s)	274, 769, 1544
TseI	GCWGC	8 cut(s)	185, 240, 446, 644, 926, 1309, 1781, 2009
Tsp45I	GTSAC	3 cut(s)	274, 769, 1544
TspDTI	ATGAA	8 cut(s)	184, 334, 655, 1266, 1272, 1314, 1762, 1988
TspGWI	ACGGA	1 cut(s)	755
TspRI	CASTG	1 cut(s)	1642
Vha464I	CTTAAG	1 cut(s)	1673
VpaK11BI	GGWCC	4 cut(s)	139, 808, 1538, 1669
XapI	RAATTY	2 cut(s)	29, 2003
XceI	RCATGY	4 cut(s)	1099, 1606, 1727, 1856
XcmI	CCANNNNNNNNNTGG	1 cut(s)	529
XmiI	GTMKAC	1 cut(s)	84
XmnI	GAANNNNTTC	1 cut(s)	1209
XspI	CTAG	7 cut(s)	51, 360, 564, 671, 1535, 1593, 2067
ZrmI	AGTACT	1 cut(s)	953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.