Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008879

Physical Location & Seq

Genomic Coordinates Reverse (-)

8604316 .. 8607741

Gene Structure 3426 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGAAACATATGGAGGAATTGGGTTTTACAGAAACAGTGTCAGAGCTAAAAGGGTTGGTTCATGAGGTCATTTCTCTGGCTCAAAATTCTGAAACCCAAAGAGAGGTGCTTGATGAAGTTGAAATCCTAGTTGGGAAGTTTGACCCGATTCTTGATGATTTAAGGGACAACATTAAGTTTAAGGACCACCCACCATTGAAGAAAGCTGTGGAGTCTCTTGGGTTAGAGCTTAAGCGAGCCGAGGTTTTAGTGAAAAAACCTGAGACCAAATCATTTACTAAACAAGTTGAGGAAGTGGTTCATGATCTTGGGAGGTCATTAGGCCTAGTGCTCTTGGCTAGTCTAGAAGTGTCCACAGACTTGAAGGACAAGATTGGGGCATTGCACAAGGATTTGATGAGTACCAGGTTTGATATGAGTTCATTTCCAAGTACTAGTTATGATTCTGGGGTTGTGAGTGAGTTGGAAATTGAAGAGGAAATACAAGAGGTTAAAAGGGTTTGTTTTGGTATTGATGATGTTGCTTTGCAATTGAAGTGTGGTGATGATGAACAGCTAAAGTATGCTCTTTTGGAATTGAATGAATTGATTGGTGATAAAAGGGTTAGCAGTGAATGGATTAATGATGAGGGTGTTATTCCGATTCTGTTTAATCGGTTAGGTTCAAGTAATTCAGACAATCGGTTGAGTATAGTTCAGTTATTGAGAACCATTGCTTCAGATAATGCTGATAACAAGGAGATGATGGCAGATGTTGGGCTTTTGTCTGCGCTTGTGAAAGTTTTGGTACGAGATGAAGAGGAAAGGAGAGAAGCTGTAGGGCTGTTGCTGGATCTTTCAGGTCTTCAGGCAGTCAGGCGCCGTCTTGGCCGTATTCAAGGGTGTATTGTTATGTTGGTTGCCTTGCTAAATGGGGATGATGCTGTTGCTTCACATCATGCTGGGAAGTTGTTAAAAGCATTGTCTAGTAACACGCAAAACGCACTTCATATGGCAGAAGCTGGTTACTTCAAGCCACTAGTGCAGTACCTCAAAGAAGGTTCTGACATGAGTAAGATCCTGATGGCGACGGCACTCTCAAGGATGGAGCTCACTGATCAAAGCAGAGCATCCCTTGGAGAGGATGGTGCAATTGAACCTCTTGTCAGAATGTTTAGCACAGGGAAGCTCGAAGCCAAGTTATCTGCTTTAAGTGCCTTGCAAAATCTGTCTAACCTGACAGAAAACATCCAACGGCTGATCAGTTCAGGCATTGTAGCATCTCTACTGCAGCTACTCTTCTCTGTAACATCTGTGCTCATGACACTTCGGGAGCCTGCATCGGCAATTCTTGCAAGGATTGCTCAATCGGAATCTGTTCTGGTTAACCACGATGTGGCTCAGCAGATGCTTTCACTCTTAAATCTTTCCAGTCCGGTAATCCAAAATCACCTCTTGCAAGCACTTAACAGCATTGCCTCCCATTCTAGAGCATCCAGAGTTAGAAGAAAAATGAAGGAAAACGGTGCATTTCAGCTTCTCCTACCTTTCCTGATGGAAACTAACATTAAAATCAGGAGCAGTGCCTTGAATCTGCTTTACACTCTCTCTAAAGATTTGCCAGAAGAGCTGACAGACCAACTAGGAGAAACCTATATCAAAATCCTTATCAATATTATCTTGTCCTCAACATTGGACAGTGAAAAAGCTGCTGCAGTTGGCATACTTGGCCATCTTCCCATCAGTGATAAAAAGGTTACAGATATGTTAAAGCGAGCTAATTTGTTGCCCATTTTGGTATCCTTAATGACTTCAAAATCCGAAATTTCAACAGAAACAACTTGCTGGTTGGTAGAAAGCATCACGGGGGTGTTTATCCGGTTCACAAATCCCTCTGATAAGAAATTACAGCTGTATTCAGCAGAACATGGGGTGATTCCTTTGCTTGTAAAGTCACTCTCCAGTGGATCATCGGTTGCCAAGTGCAGGGCTGCAACTTCACTAGCTCAATTATCGCAGAATTCATCATCTCTAAAGAAGTTGAGGGCATTAAGGTGGTCGTGTGTTCCTCCTTCTGCAGATGCAATTTGTGAAGTTCATGGAGGCCACTGCGTGGTGAAAAGCACATTTTGTTTAGTCAAGGCAGGTGCCATCTCTCCTATGATCCAAATATTGGAAGGTAAGGAGAGGGAAGCAGATGAAGCTGTGCTCGGTGCTCTTGCAACTCTCTTGCATGATGAAATTTGGGAAAGCGGAAGCAATTACATAGCCAAAAAGTCAGGCATTCCGGCGATCTTAAAAGTCCTGGAATCAGGGAGCATCAAGGCTCAAGAGAAAGCACTGTGGATATTGGAGAAGATATTTGAAGTTGAGGAACACAGAGACAAGTATGGGGAATCTGCCCAGGTGGTGCTCATTGATCTAGCCCAGCAGGGTGACTCCAGATTGAAATCAGCAACTGCAAAATTACTGGCCCAACTAGAGCTGTTGCAAGTTCAATCTAGTTACTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm KAP

Protein Analysis

830

Amino Acids

91.06

Weight (kDa)

5.68

Isoelectric Point (pI)

42.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	203 - 385	3.4e-08	ARMC5
ARM_PUB	PF25598	224 - 449	1.6e-06	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	364 - 570	4.2e-07	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008879)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g02490 FvH4_7g02490 FvH4_7g02490
malus_domestica	MD02G1293000.v1.1 MD07G1034100.v1.1
prunus_persica	Prupe.2G030600_v2.0.a1 Prupe.2G030600_v2.0.a1
pyrus_communis	pycom02g24740 pycom07g02410
rosa_chinensis	RchiOBHm_Chr1g0321131
rosa_laevigata	RLG00000030449
rosa_multiflora	Rmu_sc0004660.1_g000007 Rmu_sc0007977.1_g000007
rosa_roxburghii	Rroxscaffold_160G00433740 Rroxscaffold_4G00328070
rosa_rugosa	Rorug01G0031200 Rorug01G0031300
rosa_samantha	Rh1AG043200 Rh1BG039900 Rh1CG045300 Rh1DG049900
rosa_wichuraiana	Rw0G001070 Rw1G003790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2114
Acc36I	ACCTGC	1 cut(s)	2114
AccB1I	GGYRCC	2 cut(s)	858, 2126
AccB7I	CCANNNNNTGG	3 cut(s)	1375, 2092, 2152
AciI	CCGC	1 cut(s)	2232
AclWI	GGATC	4 cut(s)	840, 1051, 1954, 2137
AcoI	YGGCCR	2 cut(s)	868, 1708
AcsI	RAATTY	4 cut(s)	85, 1803, 1999, 2220
AcuI	CTGAAG	2 cut(s)	702, 830
AcyI	GRCGYC	1 cut(s)	859
AdeI	CACNNNGTG	2 cut(s)	1375, 2092
AfaI	GTAC	4 cut(s)	403, 433, 789, 1028
AfiI	CCNNNNNNNGG	6 cut(s)	103, 1120, 1375, 1965, 2092, 2152
AflII	CTTAAG	1 cut(s)	230
AhlI	ACTAGT	2 cut(s)	434, 1018
AjnI	CCWGG	3 cut(s)	404, 2283, 2382
AjuI	GAANNNNNNNTTGG	2 cut(s)	114, 146
AleI	CACNNNNGTG	1 cut(s)	1847
Alw21I	GWGCWC	6 cut(s)	333, 1092, 1299, 2190, 2197, 2394
Alw26I	GTCTC	3 cut(s)	219, 257, 2355
AlwI	GGATC	4 cut(s)	840, 1051, 1954, 2137
AlwNI	CAGNNNCTG	2 cut(s)	1001, 2438
AoxI	GGCC	5 cut(s)	322, 868, 1708, 2083, 2451
ApeKI	GCWGC	4 cut(s)	1270, 1688, 1691, 1970
ApoI	RAATTY	4 cut(s)	85, 1803, 1999, 2220
AseI	ATTAAT	1 cut(s)	621
Asp700I	GAANNNNTTC	2 cut(s)	297, 1356
AspLEI	GCGC	2 cut(s)	772, 861
AspS9I	GGNCC	2 cut(s)	184, 2452
AsuHPI	GGTGA	6 cut(s)	554, 605, 1421, 1924, 2107, 2426
AvaII	GGWCC	1 cut(s)	184
BalI	TGGCCA	1 cut(s)	1710
BanI	GGYRCC	2 cut(s)	858, 2126
BanII	GRGCYC	1 cut(s)	1092
BarI	GAAGNNNNNNTAC	2 cut(s)	465, 497
BbsI	GAAGAC	1 cut(s)	836
Bbv12I	GWGCWC	6 cut(s)	333, 1092, 1299, 2190, 2197, 2394
BbvI	GCAGC	4 cut(s)	1282, 1675, 1678, 1957
BccI	CCATC	8 cut(s)	739, 1057, 1078, 1118, 1528, 1719, 1727, 2138
BceAI	ACGGC	4 cut(s)	846, 855, 1086, 1250
BciT130I	CCWGG	3 cut(s)	406, 2285, 2384
BciVI	GTATCC	1 cut(s)	1789
BclI	TGATCA	2 cut(s)	1096, 1239
BcoDI	GTCTC	3 cut(s)	219, 257, 2355
BcuI	ACTAGT	2 cut(s)	434, 1018
BfmI	CTRYAG	4 cut(s)	816, 1268, 1692, 2055
BfoI	RGCGCY	1 cut(s)	862
BfrI	CTTAAG	1 cut(s)	230
BfuAI	ACCTGC	1 cut(s)	2114
BfuI	GTATCC	1 cut(s)	1789
BglI	GCCNNNNNGGC	1 cut(s)	867
BisI	GCNGC	4 cut(s)	1271, 1689, 1692, 1971
BlpI	GCTNAGC	1 cut(s)	1380
BlsI	GCNGC	4 cut(s)	1272, 1690, 1693, 1972
BmcAI	AGTACT	1 cut(s)	433
Bme1390I	CCNGG	3 cut(s)	406, 2285, 2384
Bme18I	GGWCC	1 cut(s)	184
BmgT120I	GGNCC	2 cut(s)	184, 2452
BmiI	GGNNCC	3 cut(s)	860, 1314, 2128
BmrFI	CCNGG	3 cut(s)	406, 2285, 2384
BmsI	GCATC	9 cut(s)	910, 1118, 1268, 1328, 1377, 1481, 1848, 2050, 2307
BpiI	GAAGAC	1 cut(s)	836
BpmI	CTGGAG	2 cut(s)	1924, 2404
Bpu1102I	GCTNAGC	1 cut(s)	1380
BpuEI	CTTGAG	2 cut(s)	1063, 2292
BsaBI	GATNNNNATC	1 cut(s)	2428
BsaHI	GRCGYC	1 cut(s)	859
BsaI	GGTCTC	1 cut(s)	257
BsaJI	CCNNGG	3 cut(s)	240, 1114, 2382
BsaWI	WCCGGW	2 cut(s)	1414, 1857
Bsc4I	CCNNNNNNNGG	6 cut(s)	103, 1120, 1375, 1965, 2092, 2152
Bse1I	ACTGG	3 cut(s)	1410, 1941, 2454
Bse3DI	GCAATG	3 cut(s)	380, 711, 1452
Bse8I	GATNNNNATC	1 cut(s)	2428
BseBI	CCWGG	3 cut(s)	406, 2285, 2384
BseDI	CCNNGG	3 cut(s)	240, 1114, 2382
BseGI	GGATG	6 cut(s)	922, 1089, 1109, 1129, 1227, 1472
BseJI	GATNNNNATC	1 cut(s)	2428
BseLI	CCNNNNNNNGG	6 cut(s)	103, 1120, 1375, 1965, 2092, 2152
BseMI	GCAATG	3 cut(s)	380, 711, 1452
BseMII	CTCAG	2 cut(s)	252, 1394
BseNI	ACTGG	3 cut(s)	1410, 1941, 2454
BseXI	GCAGC	4 cut(s)	1282, 1675, 1678, 1957
BseYI	CCCAGC	2 cut(s)	941, 2406
BsgI	GTGCAG	2 cut(s)	1043, 1984
BshFI	GGCC	5 cut(s)	324, 870, 1710, 2085, 2453
BshNI	GGYRCC	2 cut(s)	858, 2126
BsiHKAI	GWGCWC	6 cut(s)	333, 1092, 1299, 2190, 2197, 2394
BsiSI	CCGG	3 cut(s)	1415, 1858, 2267
BslFI	GGGAC	1 cut(s)	179
BslI	CCNNNNNNNGG	6 cut(s)	103, 1120, 1375, 1965, 2092, 2152
BsmAI	GTCTC	3 cut(s)	219, 257, 2355
BsmFI	GGGAC	1 cut(s)	179
BsmI	GAATGC	1 cut(s)	2262
BsnI	GGCC	5 cut(s)	324, 870, 1710, 2085, 2453
Bso31I	GGTCTC	1 cut(s)	257
Bsp1286I	GDGCHC	6 cut(s)	333, 1092, 1299, 2190, 2197, 2394
Bsp143I	GATC	9 cut(s)	304, 832, 1056, 1096, 1239, 1946, 2142, 2271, 2398
Bsp1720I	GCTNAGC	1 cut(s)	1380
BspACI	CCGC	1 cut(s)	2232
BspANI	GGCC	5 cut(s)	324, 870, 1710, 2085, 2453
BspCNI	CTCAG	2 cut(s)	253, 1393
BspHI	TCATGA	3 cut(s)	61, 301, 1299
BspLI	GGNNCC	3 cut(s)	860, 1314, 2128
BspMAI	CTGCAG	3 cut(s)	1272, 1696, 2059
BspMI	ACCTGC	1 cut(s)	2114
BspPI	GGATC	4 cut(s)	840, 1051, 1954, 2137
BspQI	GCTCTTC	1 cut(s)	1599
BspT107I	GGYRCC	2 cut(s)	858, 2126
BspTI	CTTAAG	1 cut(s)	230
BspTNI	GGTCTC	1 cut(s)	257
BsrDI	GCAATG	3 cut(s)	380, 711, 1452
BsrI	ACTGG	3 cut(s)	1410, 1941, 2454
BssECI	CCNNGG	3 cut(s)	240, 1114, 2382
BssMI	GATC	9 cut(s)	304, 832, 1056, 1096, 1239, 1946, 2142, 2271, 2398
BssNI	GRCGYC	1 cut(s)	859
BssT1I	CCWWGG	1 cut(s)	1114
Bst2UI	CCWGG	3 cut(s)	406, 2285, 2384
Bst4CI	ACNGT	4 cut(s)	37, 1505, 1679, 2322
Bst6I	CTCTTC	4 cut(s)	468, 792, 1283, 1599
BstACI	GRCGYC	1 cut(s)	859
BstAFI	CTTAAG	1 cut(s)	230
BstAPI	GCANNNNNTGC	2 cut(s)	1331, 1340
BstC8I	GCNNGC	4 cut(s)	237, 1317, 1440, 1755
BstDEI	CTNAG	2 cut(s)	261, 1380
BstENI	CCTNNNNNAGG	1 cut(s)	1118
BstF5I	GGATG	6 cut(s)	922, 1089, 1109, 1129, 1227, 1472
BstH2I	RGCGCY	1 cut(s)	862
BstHHI	GCGC	2 cut(s)	772, 861
BstKTI	GATC	9 cut(s)	307, 835, 1059, 1099, 1242, 1949, 2145, 2274, 2401
BstMAI	GTCTC	3 cut(s)	219, 257, 2355
BstMBI	GATC	9 cut(s)	304, 832, 1056, 1096, 1239, 1946, 2142, 2271, 2398
BstMWI	GCNNNNNNNGC	8 cut(s)	867, 1021, 1193, 1331, 1340, 1606, 1707, 2180
BstNI	CCWGG	3 cut(s)	406, 2285, 2384
BstSCI	CCNGG	3 cut(s)	404, 2283, 2382
BstSFI	CTRYAG	4 cut(s)	816, 1268, 1692, 2055
BstV1I	GCAGC	4 cut(s)	1282, 1675, 1678, 1957
BstV2I	GAAGAC	1 cut(s)	836
BstX2I	RGATCY	2 cut(s)	832, 1056
BstYI	RGATCY	2 cut(s)	832, 1056
BsuI	GTATCC	1 cut(s)	1789
BsuRI	GGCC	5 cut(s)	324, 870, 1710, 2085, 2453
BtsCI	GGATG	6 cut(s)	922, 1089, 1109, 1129, 1227, 1472
BtsI	GCAGTG	3 cut(s)	616, 1567, 2086
BtsIMutI	CAGTG	9 cut(s)	42, 616, 1092, 1567, 1684, 1729, 1948, 2086, 2318
BveI	ACCTGC	1 cut(s)	2114
Cac8I	GCNNGC	4 cut(s)	237, 1317, 1440, 1755
CaiI	CAGNNNCTG	2 cut(s)	1001, 2438
CciI	TCATGA	3 cut(s)	61, 301, 1299
CfoI	GCGC	2 cut(s)	772, 861
Cfr13I	GGNCC	2 cut(s)	184, 2452
CsiI	ACCWGGT	1 cut(s)	404
Csp6I	GTAC	4 cut(s)	402, 432, 788, 1027
CviAII	CATG	8 cut(s)	62, 302, 938, 1048, 1300, 1907, 2078, 2213
CviQI	GTAC	4 cut(s)	402, 432, 788, 1027
DdeI	CTNAG	2 cut(s)	261, 1380
DinI	GGCGCC	1 cut(s)	860
DpnI	GATC	9 cut(s)	306, 834, 1058, 1098, 1241, 1948, 2144, 2273, 2400
DpnII	GATC	9 cut(s)	304, 832, 1056, 1096, 1239, 1946, 2142, 2271, 2398
DraIII	CACNNNGTG	2 cut(s)	1375, 2092
EaeI	YGGCCR	2 cut(s)	868, 1708
Eam1104I	CTCTTC	4 cut(s)	468, 792, 1283, 1599
EarI	CTCTTC	4 cut(s)	468, 792, 1283, 1599
Ecl136II	GAGCTC	1 cut(s)	1090
Eco130I	CCWWGG	1 cut(s)	1114
Eco147I	AGGCCT	1 cut(s)	324
Eco24I	GRGCYC	1 cut(s)	1092
Eco31I	GGTCTC	1 cut(s)	257
Eco47I	GGWCC	1 cut(s)	184
Eco53kI	GAGCTC	1 cut(s)	1090
Eco57I	CTGAAG	2 cut(s)	702, 830
EcoICRI	GAGCTC	1 cut(s)	1090
EcoNI	CCTNNNNNAGG	1 cut(s)	1118
EcoRI	GAATTC	1 cut(s)	1999
EcoRII	CCWGG	3 cut(s)	404, 2283, 2382
EcoT14I	CCWWGG	1 cut(s)	1114
EcoT38I	GRGCYC	1 cut(s)	1092
EgeI	GGCGCC	1 cut(s)	860
EheI	GGCGCC	1 cut(s)	860
ErhI	CCWWGG	1 cut(s)	1114
FaeI	CATG	8 cut(s)	65, 305, 941, 1051, 1303, 1910, 2081, 2216
FaqI	GGGAC	1 cut(s)	179
FatI	CATG	8 cut(s)	61, 301, 937, 1047, 1299, 1906, 2077, 2212
FauNDI	CATATG	2 cut(s)	9, 990
FbaI	TGATCA	2 cut(s)	1096, 1239
Fnu4HI	GCNGC	4 cut(s)	1271, 1689, 1692, 1971
FokI	GGATG	6 cut(s)	929, 1096, 1096, 1136, 1214, 1459
FriOI	GRGCYC	1 cut(s)	1092
Fsp4HI	GCNGC	4 cut(s)	1271, 1689, 1692, 1971
GlaI	GCGC	2 cut(s)	771, 860
GluI	GCNGC	4 cut(s)	1271, 1689, 1692, 1971
GsaI	CCCAGC	2 cut(s)	945, 2410
GsuI	CTGGAG	2 cut(s)	1924, 2404
HaeII	RGCGCY	1 cut(s)	862
HaeIII	GGCC	5 cut(s)	324, 870, 1710, 2085, 2453
HapII	CCGG	3 cut(s)	1415, 1858, 2267
HhaI	GCGC	2 cut(s)	772, 861
Hin1I	GRCGYC	1 cut(s)	859
Hin1II	CATG	8 cut(s)	65, 305, 941, 1051, 1303, 1910, 2081, 2216
Hin6I	GCGC	2 cut(s)	770, 859
HinP1I	GCGC	2 cut(s)	770, 859
HincII	GTYRAC	1 cut(s)	1366
HindII	GTYRAC	1 cut(s)	1366
HpaI	GTTAAC	1 cut(s)	1366
HpaII	CCGG	3 cut(s)	1415, 1858, 2267
HphI	GGTGA	6 cut(s)	554, 605, 1421, 1924, 2107, 2426
Hpy166II	GTNNAC	3 cut(s)	354, 1366, 1863
Hpy8I	GTNNAC	3 cut(s)	354, 1366, 1863
Hpy99I	CGWCG	1 cut(s)	1072
HpyAV	CCTTC	5 cut(s)	358, 1031, 1489, 2061, 2150
HpyCH4III	ACNGT	4 cut(s)	37, 1505, 1679, 2322
HpyF10VI	GCNNNNNNNGC	8 cut(s)	867, 1021, 1193, 1331, 1340, 1606, 1707, 2180
HpyF3I	CTNAG	2 cut(s)	261, 1380
Hsp92I	GRCGYC	1 cut(s)	859
Hsp92II	CATG	8 cut(s)	65, 305, 941, 1051, 1303, 1910, 2081, 2216
HspAI	GCGC	2 cut(s)	770, 859
KasI	GGCGCC	1 cut(s)	858
Ksp22I	TGATCA	2 cut(s)	1096, 1239
KspAI	GTTAAC	1 cut(s)	1366
Kzo9I	GATC	9 cut(s)	304, 832, 1056, 1096, 1239, 1946, 2142, 2271, 2398
LguI	GCTCTTC	1 cut(s)	1599
LmnI	GCTCC	4 cut(s)	1087, 1312, 1557, 2295
Lsp1109I	GCAGC	4 cut(s)	1282, 1675, 1678, 1957
LweI	GCATC	9 cut(s)	910, 1118, 1268, 1328, 1377, 1481, 1848, 2050, 2307
MabI	ACCWGGT	1 cut(s)	404
MaeIII	GTNAC	7 cut(s)	968, 1004, 1285, 1735, 1932, 2414, 2483
MalI	GATC	9 cut(s)	306, 834, 1058, 1098, 1241, 1948, 2144, 2273, 2400
MboI	GATC	9 cut(s)	304, 832, 1056, 1096, 1239, 1946, 2142, 2271, 2398
MboII	GAAGA	9 cut(s)	211, 485, 809, 836, 1270, 1497, 1616, 1706, 2347
MfeI	CAATTG	2 cut(s)	530, 1131
MflI	RGATCY	2 cut(s)	832, 1056
MhlI	GDGCHC	6 cut(s)	333, 1092, 1299, 2190, 2197, 2394
MlsI	TGGCCA	1 cut(s)	1710
MluNI	TGGCCA	1 cut(s)	1710
Mly113I	GGCGCC	1 cut(s)	859
MlyI	GAGTC	2 cut(s)	221, 2411
MmeI	TCCRAC	2 cut(s)	444, 1255
Mox20I	TGGCCA	1 cut(s)	1710
MroXI	GAANNNNTTC	2 cut(s)	297, 1356
MscI	TGGCCA	1 cut(s)	1710
MslI	CAYNNNNRTG	2 cut(s)	1847, 2032
Msp20I	TGGCCA	1 cut(s)	1710
MspA1I	CMGCKG	1 cut(s)	1891
MspCI	CTTAAG	1 cut(s)	230
MspI	CCGG	3 cut(s)	1415, 1858, 2267
MspR9I	CCNGG	3 cut(s)	406, 2285, 2384
MunI	CAATTG	2 cut(s)	530, 1131
Mva1269I	GAATGC	1 cut(s)	2262
MvaI	CCWGG	3 cut(s)	406, 2285, 2384
MwoI	GCNNNNNNNGC	8 cut(s)	867, 1021, 1193, 1331, 1340, 1606, 1707, 2180
NarI	GGCGCC	1 cut(s)	859
NdeI	CATATG	2 cut(s)	9, 990
NdeII	GATC	9 cut(s)	304, 832, 1056, 1096, 1239, 1946, 2142, 2271, 2398
NlaIII	CATG	8 cut(s)	65, 305, 941, 1051, 1303, 1910, 2081, 2216
NlaIV	GGNNCC	3 cut(s)	860, 1314, 2128
NmeAIII	GCCGAG	1 cut(s)	265
NmuCI	GTSAC	2 cut(s)	1932, 2414
OliI	CACNNNNGTG	1 cut(s)	1847
PagI	TCATGA	3 cut(s)	61, 301, 1299
PaqCI	CACCTGC	1 cut(s)	2114
PceI	AGGCCT	1 cut(s)	324
PciSI	GCTCTTC	1 cut(s)	1599
PctI	GAATGC	1 cut(s)	2262
PdmI	GAANNNNTTC	2 cut(s)	297, 1356
PfeI	GAWTC	8 cut(s)	148, 443, 643, 1352, 1570, 1915, 2288, 2375
PflMI	CCANNNNNTGG	3 cut(s)	1375, 2092, 2152
PfoI	TCCNGGA	1 cut(s)	2283
PkrI	GCNGC	4 cut(s)	1272, 1690, 1693, 1972
PleI	GAGTC	2 cut(s)	220, 2411
PluTI	GGCGCC	1 cut(s)	862
PpsI	GAGTC	2 cut(s)	220, 2411
PshBI	ATTAAT	1 cut(s)	621
Psp124BI	GAGCTC	1 cut(s)	1092
Psp6I	CCWGG	3 cut(s)	404, 2283, 2382
PspFI	CCCAGC	2 cut(s)	941, 2406
PspGI	CCWGG	3 cut(s)	404, 2283, 2382
PspN4I	GGNNCC	3 cut(s)	860, 1314, 2128
PspPI	GGNCC	2 cut(s)	184, 2452
PstI	CTGCAG	3 cut(s)	1272, 1696, 2059
PstNI	CAGNNNCTG	2 cut(s)	1001, 2438
PsuI	RGATCY	2 cut(s)	832, 1056
PvuII	CAGCTG	1 cut(s)	1891
RsaI	GTAC	4 cut(s)	403, 433, 789, 1028
RsaNI	GTAC	4 cut(s)	402, 432, 788, 1027
RseI	CAYNNNNRTG	2 cut(s)	1847, 2032
SacI	GAGCTC	1 cut(s)	1092
SapI	GCTCTTC	1 cut(s)	1599
SatI	GCNGC	4 cut(s)	1271, 1689, 1692, 1971
Sau3AI	GATC	9 cut(s)	304, 832, 1056, 1096, 1239, 1946, 2142, 2271, 2398
Sau96I	GGNCC	2 cut(s)	184, 2452
ScaI	AGTACT	1 cut(s)	433
SchI	GAGTC	2 cut(s)	221, 2411
ScrFI	CCNGG	3 cut(s)	406, 2285, 2384
SduI	GDGCHC	6 cut(s)	333, 1092, 1299, 2190, 2197, 2394
SexAI	ACCWGGT	1 cut(s)	404
SfaNI	GCATC	9 cut(s)	910, 1118, 1268, 1328, 1377, 1481, 1848, 2050, 2307
SfcI	CTRYAG	4 cut(s)	816, 1268, 1692, 2055
SfoI	GGCGCC	1 cut(s)	860
SinI	GGWCC	1 cut(s)	184
SmiMI	CAYNNNNRTG	2 cut(s)	1847, 2032
SmlI	CTYRAG	3 cut(s)	230, 1078, 2307
SmoI	CTYRAG	3 cut(s)	230, 1078, 2307
SpeI	ACTAGT	2 cut(s)	434, 1018
SseBI	AGGCCT	1 cut(s)	324
SsiI	CCGC	1 cut(s)	2232
SspDI	GGCGCC	1 cut(s)	858
SspI	AATATT	2 cut(s)	1654, 2151
SstI	GAGCTC	1 cut(s)	1092
StuI	AGGCCT	1 cut(s)	324
StyD4I	CCNGG	3 cut(s)	404, 2283, 2382
StyI	CCWWGG	1 cut(s)	1114
TaaI	ACNGT	4 cut(s)	37, 1505, 1679, 2322
TaqI	TCGA	1 cut(s)	1170
TatI	WGTACW	1 cut(s)	431
TfiI	GAWTC	8 cut(s)	148, 443, 643, 1352, 1570, 1915, 2288, 2375
TscAI	CASTG	9 cut(s)	42, 616, 1099, 1567, 1684, 1729, 1948, 2093, 2325
TseFI	GTSAC	2 cut(s)	1932, 2414
TseI	GCWGC	4 cut(s)	1270, 1688, 1691, 1970
Tsp45I	GTSAC	2 cut(s)	1932, 2414
TspRI	CASTG	9 cut(s)	42, 616, 1099, 1567, 1684, 1729, 1948, 2093, 2325
Van91I	CCANNNNNTGG	3 cut(s)	1375, 2092, 2152
Vha464I	CTTAAG	1 cut(s)	230
VpaK11BI	GGWCC	1 cut(s)	184
VspI	ATTAAT	1 cut(s)	621
XagI	CCTNNNNNAGG	1 cut(s)	1118
XapI	RAATTY	4 cut(s)	85, 1803, 1999, 2220
XbaI	TCTAGA	2 cut(s)	343, 1466
XmnI	GAANNNNTTC	2 cut(s)	297, 1356
ZrmI	AGTACT	1 cut(s)	433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.