Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005615

Physical Location & Seq

Genomic Coordinates Reverse (-)

43972134 .. 43980744

Gene Structure 8611 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2697 bp

ATGGCGTACCGAAACGGCGTCGCCGCCAGGGGCACGGTGAAGCTGGATCGCCCCGTCAGCTTCAGAACCTCGTCGTCTTTCAAGTCCAAGCTTCCTCCCTCTCCCTCTCCCGCCTCTGGATCCGCTCTCCGCCGCAGCAGTCCGGCCTCGTTCGGCTCCGCTTCTAACAAAGACGATCACGCAGTGCCGGGAAGAGTTAGAGTGGCTGTAAGATTGCGACCTAGAAATGCGGAGGAGTCGGCTGCCGACGCAGATTTTGCTGACTGTGTGGAGTTGCAGCCGGAGCTTAAGAGGTTGAAACTTCGGAAGAACAATTGGGACACTGACACCTACGAGTTTGATGATGTGCTTACTGAATATGCGTCGCAGAAGCGCGTCTATGAAGTTGTTGCTAAGCCTGTTGTGGAGAGTGTTTTAGATGGTTACAATGGGACCGTGATGGCTTATGGTCAGACGGGTACGGGGAAAACATTTACTCTTGGGCGACTAGGAGAAGAAGATACATCTGATCGTGGAATCATGGTTCGTGCAATGGAGGACATTTTAGCTGATATATCTTTAGAGACTGATTCTGTCTCTGTCTCGTATCTGCAGCTTTATATGGAGACCCTCCAAGACCTGCTGGATCCAGCAAATGATAATATTCCCATTGTTGAAGATCCAAAAACTGGAGATGTTTCAGTACCTAGGGCAACTGTTGTAGATATCAAGGACCAGTTAAGTTTCCTGGAGCTGTTAAGAGTTGGTGAAGCTCATCGCATTGCCGCTAATACAAAGTTGAATACTGAATCTTCTCGCAGTCATGCGATTCTGATGGTAAATGTTAAGAGGTGTGTTATGGGAAGTGAAGATAATGTTTCGAGTGAAAATGGTGATCCTTCTCACTTGACCAAGCCTTCTAGACCACTTGTTCGGAAAAGCAAACTTGTTGTTGTAGATTTGGCAGGTTCGGAACGCATCCAGAAATCAGGAAGTGAGGGACATATGTTAGAGGAAGCCAAGTGTATCAATCTGTCTCTTAGTGCATTAGGGAAGTGTATTAATTCTCTAGCCGAGAATAGTAGCCATGTTCCATTTCGTGATTCAAAGCTTACAAGATTGCTTAGAGATTCATTTGGAGGATCAGCGAGGACTTCACTAATTGTTACCATTGGTCCTTCTCCACGCCATCGAGGAGAGACTTCAAGTACCATACTATTTGGGCAAAGGGCTATGAAGGTGGAAAATATGTTGAAAATAAAGGAAGAGTTTGATTACAAAAGTTTGTCGAGAAAACTTGAAGTACAACTGGATAAGCTTATTGCAGAAAATGAAAGGCAGCATAAAGCTTATGAGGATGAAGTTGAAAGACTAAATGTAGAAGCAGAAAAACGTATTTCAGAGGTTGAGAGAAACTTTGCTGATGCATTAGAGAAGGAGAGGCGAAAATGCCAGATGGATTATATGGAAGCTGTTAAGAAGCTTGAGGAGAAGTTGGTGTCAAATCAGAAGCAAGGCCAGGAGGGCCTGGTCAATGGTAAATGCAATGGAGAGGAAGTGAGTGAGGTGCAAGAGTTGCTCCAAAAAGAAATTCACCTTCGAAAGGTGGCTGAAGAGGAGGTGGAAAATCTTAAAACTCAACTGGGGCTATTTACACAATCAGAAGTAGGTGGAAATGCAGAGATTGTAAGGGTTCACAAAATTTTAGAGGAGGAGGCCCGGCATAAGAAGAAACTTGAAGAAGAAATCATTATATTACGTAGTCAGTTATTGCAATTGAATTTTGAAGCTGAACAGATGAGGAGCTGTCTTGATAGAGGCGGGGCTGGAAATGGGTATAGTACTGCAGATTCTTCCATGTCTTCAGTCAGGCATTCTCATCCCAGAGATGTTGGAAATGGACAGAAGGCACCAGTTTCCACACTCTTTGAACAAGGTGTTGGATTGCAAAAGATTTTGTCGTTACTGGAGTCAGAAGATGCTAATGTGCGTATTCATGCTGTAAAAGTAGTGGCCAACCTAGCAGCTGAAGAAACAAACCAGAAAAGGATTGTTGAAGCTGGTGGTCTTACTTCGTTGTTGATGCTTCTTAGGAGCTTTGAGGATGAGACTGTTCGAAGAGTGGCAGCCGGTGCAATTGCGAATCTTGCAATGAATGAAGCCAATCAAGAGCATATAATGGTTCAAGGTGGAATCAGTTTGTTGGCCACAACGGCAGCTGATGCTGATGATGCCCAAACCCTTCGCATGGTTGCTGGAGCTATTGCAAATTTATGCGGCAATGATAAGCTACAAACAAACCTACGGTCTGAAGGTGGTATTAAGGCTTTATTAGGAATTGTAAGGTGCGGGCATCCTGATGTCCTTTCCCAAGTCGCACGTGGAATTGCTAACTTTGCAAAATGCGAGTCCCGAGCATGTACTCAAGGGATAAAGAGCGGAAGATCCATATTGATAGAAGATGGGGCACTTCCATGGATTGTGCAAAATGCCAATGACGAGGCTGCACCTATCCGGCGCCACATTGAGCTTGCACTCTGTCACTTGGCACAGCATGAGGTAAATGCAAAAGACATGATTAGTGGAGGTGCCCTATGGGAGCTAGTTCGTATTTCACGGGACTGTTCACGAGAAGACATAAGGAGTCTTGCTCGTCGGATTTTGAATTCAAGCCCCACTTTCCGTGCAGAACTACGGCGATTACGGATAGACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04144 ko04728 map04144 map04728

Pfam Domains

Protein Families

Arm Kinesin

Protein Analysis

898

Amino Acids

99.06

Weight (kDa)

6.18

Isoelectric Point (pI)

48.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	64 - 208	1.9e-16	Microtubule binding
Kinesin	PF00225	71 - 407	4.2e-96	Kinesin motor domain
ARM_ARMC5	PF24768	663 - 866	3.4e-15	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005615)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01950 AT1G01950 AT1G01950 AT1G01950
fragaria_vesca	FvH4_2g41300 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050
malus_domestica	MD02G1201700.v1.1
prunus_persica	Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1
pyrus_communis	pycom02g16510
rosa_chinensis	RchiOBHm_Chr1g0350761
rosa_laevigata	RLG00000028455
rosa_multiflora	Rmu_sc0006200.1_g000002 Rmu_sc0008591.1_g000001
rosa_roxburghii	Rroxscaffold_4G00304510
rosa_rugosa	Rorug01G0214000
rosa_samantha	Rh1AG228400 Rh1BG197800 Rh1CG213200 Rh1DG225700
rosa_wichuraiana	Rw1G019780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	627, 935
AccB1I	GGYRCC	3 cut(s)	1888, 2496, 2567
AccB7I	CCANNNNNTGG	1 cut(s)	668
AccBSI	CCGCTC	2 cut(s)	125, 2418
AccII	CGCG	1 cut(s)	375
AclWI	GGATC	9 cut(s)	54, 114, 127, 620, 633, 653, 869, 1129, 2418
AcoI	YGGCCR	2 cut(s)	1992, 2184
AcsI	RAATTY	5 cut(s)	1569, 1680, 1759, 2248, 2644
AcuI	CTGAAG	5 cut(s)	46, 1611, 1827, 2028, 2310
AcvI	CACGTG	1 cut(s)	2360
AcyI	GRCGYC	2 cut(s)	18, 2497
AdeI	CACNNNGTG	1 cut(s)	184
AfaI	GTAC	7 cut(s)	8, 460, 684, 1189, 1284, 1822, 2401
AfiI	CCNNNNNNNGG	4 cut(s)	116, 668, 1582, 2227
AflII	CTTAAG	1 cut(s)	287
AjnI	CCWGG	4 cut(s)	26, 726, 1497, 1506
AjuI	GAANNNNNNNTTGG	4 cut(s)	1554, 1586, 1902, 1934
AloI	GAACNNNNNNTCC	2 cut(s)	507, 539
Alw26I	GTCTC	7 cut(s)	557, 580, 586, 599, 1020, 1172, 2081
AlwI	GGATC	9 cut(s)	54, 114, 127, 620, 633, 653, 869, 1129, 2418
Ama87I	CYCGRG	1 cut(s)	2391
AoxI	GGCC	6 cut(s)	144, 1495, 1504, 1695, 1992, 2184
ApeKI	GCWGC	9 cut(s)	135, 242, 277, 592, 1318, 2003, 2105, 2195, 2483
ApoI	RAATTY	5 cut(s)	1569, 1680, 1759, 2248, 2644
ArsI	GACNNNNNNTTYG	8 cut(s)	239, 271, 894, 926, 2270, 2302, 2372, 2404
AseI	ATTAAT	1 cut(s)	1041
AspA2I	CCTAGG	1 cut(s)	686
AspLEI	GCGC	2 cut(s)	375, 2499
AspS9I	GGNCC	5 cut(s)	432, 712, 1154, 1504, 1696
AsuC2I	CCSGG	2 cut(s)	189, 1699
AsuHPI	GGTGA	4 cut(s)	49, 758, 884, 1565
AsuII	TTCGAA	2 cut(s)	1579, 2095
AvaI	CYCGRG	1 cut(s)	2391
AvaII	GGWCC	3 cut(s)	432, 712, 1154
AvrII	CCTAGG	1 cut(s)	686
BaeGI	GKGCMC	3 cut(s)	35, 2449, 2572
BalI	TGGCCA	2 cut(s)	1994, 2186
BamHI	GGATCC	2 cut(s)	119, 625
BanI	GGYRCC	3 cut(s)	1888, 2496, 2567
BauI	CACGAG	1 cut(s)	2607
BbrPI	CACGTG	1 cut(s)	2360
BbsI	GAAGAC	2 cut(s)	1833, 2619
BbvI	GCAGC	9 cut(s)	147, 229, 289, 604, 1330, 2015, 2117, 2207, 2470
BccI	CCATC	6 cut(s)	413, 433, 808, 1176, 1429, 2435
BceAI	ACGGC	3 cut(s)	31, 2208, 2690
BciT130I	CCWGG	4 cut(s)	28, 728, 1499, 1508
BcnI	CCSGG	2 cut(s)	189, 1699
BcoDI	GTCTC	7 cut(s)	557, 580, 586, 599, 1020, 1172, 2081
BfaI	CTAG	7 cut(s)	222, 488, 687, 900, 1049, 2000, 2582
BfmI	CTRYAG	2 cut(s)	590, 1824
BfoI	RGCGCY	1 cut(s)	2500
BfrI	CTTAAG	1 cut(s)	287
BfuAI	ACCTGC	2 cut(s)	627, 935
BglI	GCCNNNNNGGC	2 cut(s)	1503, 2192
BlnI	CCTAGG	1 cut(s)	686
BlpI	GCTNAGC	1 cut(s)	393
BmcAI	AGTACT	1 cut(s)	1822
Bme1390I	CCNGG	6 cut(s)	28, 189, 728, 1499, 1508, 1699
Bme18I	GGWCC	3 cut(s)	432, 712, 1154
BmeT110I	CYCGRG	1 cut(s)	2391
BmgT120I	GGNCC	5 cut(s)	432, 712, 1154, 1504, 1696
BmiI	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2498, 2569
BmrFI	CCNGG	6 cut(s)	28, 189, 728, 1499, 1508, 1699
BmrI	ACTGGG	1 cut(s)	1631
BmsI	GCATC	7 cut(s)	966, 1393, 1948, 2052, 2191, 2200, 2341
BmuI	ACTGGG	1 cut(s)	1631
BpiI	GAAGAC	2 cut(s)	1833, 2619
BplI	GAGNNNNNCTC	2 cut(s)	2614, 2646
BpmI	CTGGAG	4 cut(s)	690, 749, 1967, 2256
Bpu1102I	GCTNAGC	1 cut(s)	393
Bpu14I	TTCGAA	2 cut(s)	1579, 2095
BpuEI	CTTGAG	2 cut(s)	1484, 2388
BpuMI	CCSGG	2 cut(s)	189, 1699
BsaAI	YACGTR	2 cut(s)	1739, 2360
BsaHI	GRCGYC	2 cut(s)	18, 2497
BsaI	GGTCTC	1 cut(s)	599
BsaJI	CCNNGG	3 cut(s)	27, 686, 2453
BsaXI	ACNNNNNCTCC	2 cut(s)	1521, 1551
Bsc4I	CCNNNNNNNGG	4 cut(s)	116, 668, 1582, 2227
Bse118I	RCCGGY	1 cut(s)	2108
Bse1I	ACTGG	6 cut(s)	673, 715, 1293, 1626, 1892, 1950
Bse3DI	GCAATG	5 cut(s)	537, 759, 1531, 2136, 2266
BseBI	CCWGG	4 cut(s)	28, 728, 1499, 1508
BseDI	CCNNGG	3 cut(s)	27, 686, 2453
BseGI	GGATG	5 cut(s)	957, 1342, 1858, 2089, 2332
BseLI	CCNNNNNNNGG	4 cut(s)	116, 668, 1582, 2227
BseMI	GCAATG	5 cut(s)	537, 759, 1531, 2136, 2266
BseNI	ACTGG	6 cut(s)	673, 715, 1293, 1626, 1892, 1950
BseRI	GAGGAG	7 cut(s)	248, 1188, 1481, 1610, 1703, 1706, 1795
BseSI	GKGCMC	3 cut(s)	35, 2449, 2572
BseXI	GCAGC	9 cut(s)	147, 229, 289, 604, 1330, 2015, 2117, 2207, 2470
BsgI	GTGCAG	2 cut(s)	2469, 2685
Bsh1236I	CGCG	1 cut(s)	375
BshFI	GGCC	6 cut(s)	146, 1497, 1506, 1697, 1994, 2186
BshNI	GGYRCC	3 cut(s)	1888, 2496, 2567
BsiHKCI	CYCGRG	1 cut(s)	2391
BsiSI	CCGG	6 cut(s)	143, 188, 281, 1699, 2109, 2494
BslFI	GGGAC	5 cut(s)	332, 445, 993, 2374, 2612
BslI	CCNNNNNNNGG	4 cut(s)	116, 668, 1582, 2227
BsmAI	GTCTC	7 cut(s)	557, 580, 586, 599, 1020, 1172, 2081
BsmFI	GGGAC	5 cut(s)	332, 445, 993, 2374, 2612
BsmI	GAATGC	1 cut(s)	1852
BsnI	GGCC	6 cut(s)	146, 1497, 1506, 1697, 1994, 2186
Bso31I	GGTCTC	1 cut(s)	599
BsoBI	CYCGRG	1 cut(s)	2391
Bsp119I	TTCGAA	2 cut(s)	1579, 2095
Bsp1286I	GDGCHC	3 cut(s)	35, 2449, 2572
Bsp143I	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2423
Bsp1720I	GCTNAGC	1 cut(s)	393
Bsp19I	CCATGG	1 cut(s)	2453
BspANI	GGCC	6 cut(s)	146, 1497, 1506, 1697, 1994, 2186
BspFNI	CGCG	1 cut(s)	375
BspLI	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2498, 2569
BspMAI	CTGCAG	2 cut(s)	594, 1828
BspMI	ACCTGC	2 cut(s)	627, 935
BspPI	GGATC	9 cut(s)	54, 114, 127, 620, 633, 653, 869, 1129, 2418
BspT104I	TTCGAA	2 cut(s)	1579, 2095
BspT107I	GGYRCC	3 cut(s)	1888, 2496, 2567
BspTI	CTTAAG	1 cut(s)	287
BspTNI	GGTCTC	1 cut(s)	599
BsrBI	CCGCTC	2 cut(s)	125, 2418
BsrDI	GCAATG	5 cut(s)	537, 759, 1531, 2136, 2266
BsrFI	RCCGGY	1 cut(s)	2108
BsrI	ACTGG	6 cut(s)	673, 715, 1293, 1626, 1892, 1950
BssAI	RCCGGY	1 cut(s)	2108
BssECI	CCNNGG	3 cut(s)	27, 686, 2453
BssMI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2423
BssNI	GRCGYC	2 cut(s)	18, 2497
BssSI	CACGAG	1 cut(s)	2607
BssT1I	CCWWGG	2 cut(s)	686, 2453
Bst2BI	CACGAG	1 cut(s)	2607
Bst2UI	CCWGG	4 cut(s)	28, 728, 1499, 1508
Bst4CI	ACNGT	7 cut(s)	37, 266, 436, 697, 2092, 2286, 2603
Bst6I	CTCTTC	4 cut(s)	187, 1239, 1587, 2092
BstACI	GRCGYC	2 cut(s)	18, 2497
BstAFI	CTTAAG	1 cut(s)	287
BstAPI	GCANNNNNTGC	4 cut(s)	257, 1555, 2111, 2201
BstBAI	YACGTR	2 cut(s)	1739, 2360
BstBI	TTCGAA	2 cut(s)	1579, 2095
BstC8I	GCNNGC	2 cut(s)	2330, 2511
BstDEI	CTNAG	4 cut(s)	393, 1019, 1103, 2069
BstDSI	CCRYGG	1 cut(s)	2453
BstENI	CCTNNNNNAGG	1 cut(s)	1580
BstF5I	GGATG	5 cut(s)	957, 1342, 1858, 2089, 2332
BstFNI	CGCG	1 cut(s)	375
BstH2I	RGCGCY	1 cut(s)	2500
BstHHI	GCGC	2 cut(s)	375, 2499
BstKTI	GATC	9 cut(s)	49, 122, 178, 511, 628, 661, 877, 1124, 2426
BstMAI	GTCTC	7 cut(s)	557, 580, 586, 599, 1020, 1172, 2081
BstMBI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2423
BstNI	CCWGG	4 cut(s)	28, 728, 1499, 1508
BstNSI	RCATGY	1 cut(s)	2400
BstSCI	CCNGG	6 cut(s)	26, 187, 726, 1497, 1506, 1697
BstSFI	CTRYAG	2 cut(s)	590, 1824
BstSLI	GKGCMC	3 cut(s)	35, 2449, 2572
BstSNI	TACGTA	1 cut(s)	1739
BstUI	CGCG	1 cut(s)	375
BstV1I	GCAGC	9 cut(s)	147, 229, 289, 604, 1330, 2015, 2117, 2207, 2470
BstV2I	GAAGAC	2 cut(s)	1833, 2619
BstX2I	RGATCY	4 cut(s)	119, 625, 658, 2423
BstYI	RGATCY	4 cut(s)	119, 625, 658, 2423
BsuRI	GGCC	6 cut(s)	146, 1497, 1506, 1697, 1994, 2186
BtgI	CCRYGG	1 cut(s)	2453
BtgZI	GCGATG	1 cut(s)	740
BtsCI	GGATG	5 cut(s)	957, 1342, 1858, 2089, 2332
BtsI	GCAGTG	1 cut(s)	189
BtsIMutI	CAGTG	2 cut(s)	189, 321
BveI	ACCTGC	2 cut(s)	627, 935
Cac8I	GCNNGC	2 cut(s)	2330, 2511
CfoI	GCGC	2 cut(s)	375, 2499
Cfr10I	RCCGGY	1 cut(s)	2108
Cfr13I	GGNCC	5 cut(s)	432, 712, 1154, 1504, 1696
CseI	GACGC	4 cut(s)	7, 257, 351, 364
Csp6I	GTAC	7 cut(s)	7, 459, 683, 1188, 1283, 1821, 2400
CspCI	CAANNNNNGTGG	2 cut(s)	1888, 1923
CviQI	GTAC	7 cut(s)	7, 459, 683, 1188, 1283, 1821, 2400
DdeI	CTNAG	4 cut(s)	393, 1019, 1103, 2069
DinI	GGCGCC	1 cut(s)	2498
DpnI	GATC	9 cut(s)	48, 121, 177, 510, 627, 660, 876, 1123, 2425
DpnII	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2423
DraIII	CACNNNGTG	1 cut(s)	184
EaeI	YGGCCR	2 cut(s)	1992, 2184
Eam1104I	CTCTTC	4 cut(s)	187, 1239, 1587, 2092
EarI	CTCTTC	4 cut(s)	187, 1239, 1587, 2092
EciI	GGCGGA	1 cut(s)	119
Eco105I	TACGTA	1 cut(s)	1739
Eco130I	CCWWGG	2 cut(s)	686, 2453
Eco31I	GGTCTC	1 cut(s)	599
Eco32I	GATATC	1 cut(s)	706
Eco47I	GGWCC	3 cut(s)	432, 712, 1154
Eco57I	CTGAAG	5 cut(s)	46, 1611, 1827, 2028, 2310
Eco72I	CACGTG	1 cut(s)	2360
Eco88I	CYCGRG	1 cut(s)	2391
EcoNI	CCTNNNNNAGG	1 cut(s)	1580
EcoO109I	RGGNCCY	1 cut(s)	1504
EcoRI	GAATTC	1 cut(s)	2644
EcoRII	CCWGG	4 cut(s)	26, 726, 1497, 1506
EcoRV	GATATC	1 cut(s)	706
EcoT14I	CCWWGG	2 cut(s)	686, 2453
EcoT22I	ATGCAT	1 cut(s)	1408
EgeI	GGCGCC	1 cut(s)	2498
EheI	GGCGCC	1 cut(s)	2498
ErhI	CCWWGG	2 cut(s)	686, 2453
FalI	AAGNNNNNCTT	2 cut(s)	2641, 2673
FaqI	GGGAC	5 cut(s)	332, 445, 993, 2374, 2612
FauI	CCCGC	3 cut(s)	118, 1793, 2321
FauNDI	CATATG	1 cut(s)	984
FokI	GGATG	5 cut(s)	944, 1349, 1845, 2096, 2319
FspBI	CTAG	7 cut(s)	222, 488, 687, 900, 1049, 2000, 2582
GlaI	GCGC	2 cut(s)	374, 2498
GsuI	CTGGAG	4 cut(s)	690, 749, 1967, 2256
HaeII	RGCGCY	1 cut(s)	2500
HaeIII	GGCC	6 cut(s)	146, 1497, 1506, 1697, 1994, 2186
HapII	CCGG	6 cut(s)	143, 188, 281, 1699, 2109, 2494
HgaI	GACGC	4 cut(s)	7, 257, 351, 364
HhaI	GCGC	2 cut(s)	375, 2499
Hin1I	GRCGYC	2 cut(s)	18, 2497
Hin6I	GCGC	2 cut(s)	373, 2497
HinP1I	GCGC	2 cut(s)	373, 2497
HindIII	AAGCTT	5 cut(s)	89, 1088, 1295, 1326, 1460
HpaII	CCGG	6 cut(s)	143, 188, 281, 1699, 2109, 2494
HphI	GGTGA	4 cut(s)	49, 758, 884, 1565
Hpy166II	GTNNAC	2 cut(s)	1675, 2606
Hpy8I	GTNNAC	2 cut(s)	1675, 2606
Hpy99I	CGWCG	5 cut(s)	23, 76, 251, 367, 2637
HpyAV	CCTTC	9 cut(s)	888, 906, 1167, 1210, 1408, 1586, 1879, 2231, 2285
HpyCH4III	ACNGT	7 cut(s)	37, 266, 436, 697, 2092, 2286, 2603
HpyCH4IV	ACGT	3 cut(s)	1372, 1738, 2359
HpyF3I	CTNAG	4 cut(s)	393, 1019, 1103, 2069
HpySE526I	ACGT	3 cut(s)	1372, 1738, 2359
Hsp92I	GRCGYC	2 cut(s)	18, 2497
HspAI	GCGC	2 cut(s)	373, 2497
KasI	GGCGCC	1 cut(s)	2496
Kzo9I	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2423
LmnI	GCTCC	8 cut(s)	161, 283, 730, 1563, 1782, 2073, 2237, 2578
Lsp1109I	GCAGC	9 cut(s)	147, 229, 289, 604, 1330, 2015, 2117, 2207, 2470
LweI	GCATC	7 cut(s)	966, 1393, 1948, 2052, 2191, 2200, 2341
MaeI	CTAG	7 cut(s)	222, 488, 687, 900, 1049, 2000, 2582
MaeII	ACGT	3 cut(s)	1372, 1738, 2359
MaeIII	GTNAC	4 cut(s)	422, 1144, 1941, 2519
MalI	GATC	9 cut(s)	48, 121, 177, 510, 627, 660, 876, 1123, 2425
MbiI	CCGCTC	2 cut(s)	125, 2418
MboI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2423
MfeI	CAATTG	3 cut(s)	313, 1754, 2115
MflI	RGATCY	4 cut(s)	119, 625, 658, 2423
MhlI	GDGCHC	3 cut(s)	35, 2449, 2572
MlsI	TGGCCA	2 cut(s)	1994, 2186
MluNI	TGGCCA	2 cut(s)	1994, 2186
Mly113I	GGCGCC	1 cut(s)	2497
MlyI	GAGTC	4 cut(s)	245, 1958, 2396, 2632
MmeI	TCCRAC	3 cut(s)	1852, 1900, 2615
Mox20I	TGGCCA	2 cut(s)	1994, 2186
Mph1103I	ATGCAT	1 cut(s)	1408
MscI	TGGCCA	2 cut(s)	1994, 2186
MseI	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2301
MslI	CAYNNNNRTG	2 cut(s)	2337, 2452
Msp20I	TGGCCA	2 cut(s)	1994, 2186
MspA1I	CMGCKG	2 cut(s)	2006, 2198
MspCI	CTTAAG	1 cut(s)	287
MspI	CCGG	6 cut(s)	143, 188, 281, 1699, 2109, 2494
MspR9I	CCNGG	6 cut(s)	28, 189, 728, 1499, 1508, 1699
MunI	CAATTG	3 cut(s)	313, 1754, 2115
Mva1269I	GAATGC	1 cut(s)	1852
MvaI	CCWGG	4 cut(s)	28, 728, 1499, 1508
MvnI	CGCG	1 cut(s)	375
NarI	GGCGCC	1 cut(s)	2497
NciI	CCSGG	2 cut(s)	189, 1699
NcoI	CCATGG	1 cut(s)	2453
NdeI	CATATG	1 cut(s)	984
NdeII	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2423
NlaIV	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2498, 2569
NmeAIII	GCCGAG	1 cut(s)	1078
NmuCI	GTSAC	1 cut(s)	2519
NsiI	ATGCAT	1 cut(s)	1408
NspI	RCATGY	1 cut(s)	2400
NspV	TTCGAA	2 cut(s)	1579, 2095
PctI	GAATGC	1 cut(s)	1852
PfeI	GAWTC	9 cut(s)	516, 569, 788, 808, 1082, 1109, 1829, 2122, 2172
PflMI	CCANNNNNTGG	1 cut(s)	668
PfoI	TCCNGGA	1 cut(s)	726
PleI	GAGTC	4 cut(s)	244, 1957, 2395, 2631
PluTI	GGCGCC	1 cut(s)	2500
PmaCI	CACGTG	1 cut(s)	2360
PmlI	CACGTG	1 cut(s)	2360
PpsI	GAGTC	4 cut(s)	244, 1957, 2395, 2631
Ppu21I	YACGTR	2 cut(s)	1739, 2360
PshBI	ATTAAT	1 cut(s)	1041
Psp6I	CCWGG	4 cut(s)	26, 726, 1497, 1506
PspCI	CACGTG	1 cut(s)	2360
PspGI	CCWGG	4 cut(s)	26, 726, 1497, 1506
PspN4I	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2498, 2569
PspPI	GGNCC	5 cut(s)	432, 712, 1154, 1504, 1696
PstI	CTGCAG	2 cut(s)	594, 1828
PsuI	RGATCY	4 cut(s)	119, 625, 658, 2423
PvuII	CAGCTG	2 cut(s)	2006, 2198
RsaI	GTAC	7 cut(s)	8, 460, 684, 1189, 1284, 1822, 2401
RsaNI	GTAC	7 cut(s)	7, 459, 683, 1188, 1283, 1821, 2400
RseI	CAYNNNNRTG	2 cut(s)	2337, 2452
SaqAI	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2301
Sau3AI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2423
Sau96I	GGNCC	5 cut(s)	432, 712, 1154, 1504, 1696
ScaI	AGTACT	1 cut(s)	1822
SchI	GAGTC	4 cut(s)	245, 1958, 2396, 2632
ScrFI	CCNGG	6 cut(s)	28, 189, 728, 1499, 1508, 1699
SduI	GDGCHC	3 cut(s)	35, 2449, 2572
SfaNI	GCATC	7 cut(s)	966, 1393, 1948, 2052, 2191, 2200, 2341
SfcI	CTRYAG	2 cut(s)	590, 1824
SfiI	GGCCNNNNNGGCC	1 cut(s)	1503
SfoI	GGCGCC	1 cut(s)	2498
SfuI	TTCGAA	2 cut(s)	1579, 2095
SinI	GGWCC	3 cut(s)	432, 712, 1154
SmiMI	CAYNNNNRTG	2 cut(s)	2337, 2452
SmlI	CTYRAG	3 cut(s)	287, 1463, 2403
SmoI	CTYRAG	3 cut(s)	287, 1463, 2403
SnaBI	TACGTA	1 cut(s)	1739
SspDI	GGCGCC	1 cut(s)	2496
SspI	AATATT	1 cut(s)	643
SspMI	CTAG	7 cut(s)	222, 488, 687, 900, 1049, 2000, 2582
StyD4I	CCNGG	6 cut(s)	26, 187, 726, 1497, 1506, 1697
StyI	CCWWGG	2 cut(s)	686, 2453
TaaI	ACNGT	7 cut(s)	37, 266, 436, 697, 2092, 2286, 2603
TaiI	ACGT	3 cut(s)	1375, 1741, 2362
TaqI	TCGA	5 cut(s)	860, 1171, 1268, 1579, 2095
TatI	WGTACW	3 cut(s)	1282, 1820, 2399
TauI	GCSGC	4 cut(s)	26, 135, 767, 2259
TfiI	GAWTC	9 cut(s)	516, 569, 788, 808, 1082, 1109, 1829, 2122, 2172
Tru1I	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2301
Tru9I	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2301
TscAI	CASTG	2 cut(s)	189, 328
TseFI	GTSAC	1 cut(s)	2519
TseI	GCWGC	9 cut(s)	135, 242, 277, 592, 1318, 2003, 2105, 2195, 2483
Tsp45I	GTSAC	1 cut(s)	2519
TspDTI	ATGAA	8 cut(s)	396, 1101, 1229, 1326, 1353, 1964, 2147, 2151
TspGWI	ACGGA	1 cut(s)	2651
TspRI	CASTG	2 cut(s)	189, 328
Van91I	CCANNNNNTGG	1 cut(s)	668
Vha464I	CTTAAG	1 cut(s)	287
VpaK11BI	GGWCC	3 cut(s)	432, 712, 1154
VspI	ATTAAT	1 cut(s)	1041
XagI	CCTNNNNNAGG	1 cut(s)	1580
XapI	RAATTY	5 cut(s)	1569, 1680, 1759, 2248, 2644
XbaI	TCTAGA	1 cut(s)	899
XceI	RCATGY	1 cut(s)	2400
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2357
XmaJI	CCTAGG	1 cut(s)	686
XspI	CTAG	7 cut(s)	222, 488, 687, 900, 1049, 2000, 2582
ZrmI	AGTACT	1 cut(s)	1822
Zsp2I	ATGCAT	1 cut(s)	1408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.