Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0005615

Physical Location & Seq

Genomic Coordinates Reverse (-)

43625309 .. 43633471

Gene Structure 8163 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG225700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2694 bp

ATGGCGTACCGAAACGGCGTCGCCGCCAGGGGCACGGTGAAGCTGGATCGCCCCGTCAGCTTCAGAACCTCGTCGTCTTTCAAGTCCAAGCTCCCTCCCTCTCCGTCTCCCGCCGCCGGATCCGCTCTCCGCCGCAGCAGTCCGGCGTCGTTCGGCTCCGCTTCTAACAAAGACGATCACGCAGTGCCGGGAAGAGTTAGAGTAGCTGTAAGATTGCGACCTAGAAATGCGGAGGAGTCGGCTGCCGACGCAGATTTTGCTGACTGTGTGGAGTTGCAGCCGGAGCTTAAGAGGTTGAAACTTCGGAAGAACAATTGGGACACTGACACCTACGAATTTGATGATGTGCTTACTGAATATGCGTCGCAGAAGCGCGTCTATGAAGTTGTTGCTAAGCCTGTTGTGGAGAGTGTTTTAGATGGTTACAATGGGACCGTGATGGCTTATGGTCAGACGGGTACGGGGAAAACATTTACTCTTGGACGACTAGGAGAAGAAGATACATCTGATCGTGGAATCATGGTTCGTGCAATGGAGGACATTTTAGCTGATATATCTTTAGAGACTGATTCTGTCTCTGTCTCGTATCTGCAGCTTTATATGGAGACCCTCCAAGACCTGCTGGATCCAGCAAATGATAATATTCCCATTGTTGAAGATCCAAAAACTGGAGATGTTTCAGTACCTAGGGCAACTGTTGTAGATATCAAGGACCAGTTAAGTTTCCTGGAGCTGTTAAGAGTTGGTGAAGCTCATCGCATTGCCGCTAATACAAAGTTGAATACTGAATCTTCTCGCAGTCATGCGATTCTGATGGTAAATGTTAAGAGGTGTGTTATGGGAAGTGAAGATAATGTTTCGAGTGAAAATGGTGATCCTTCTCACCTGACCAAGCCTTCTAGACCACTTGTTCGGAAAAGCAAACTTGTTGTTGTAGATTTGGCAGGTTCGGAACGCATCCAGAAATCAGGAAGTGAGGGACATATGTTAGAGGAAGCCAAGTGTATCAATCTGTCTCTTAGTGCATTAGGGAAGTGTATTAATTCTTTAGCCGAGAATAGTAGTCATGTTCCATTTCGTGATTCAAAGCTTACAAGATTGCTTAGAGATTCATTTGGAGGATCAGCGAGGACTTCACTAATTGTTACCATTGGTCCTTCTCCACGCCATCGAGGAGAGACTTCAAGTACCATACTATTTGGGCAAAGGGCTATGAAGGTGGAAAATATGTTGAAAATAAAGGAAGAGTTTGATTACAAAAGTTTGTCGAGAAAGCTTGAAGTACAACTGGATAAGCTTATTGCAGAAAATGAAAGGCAGCATAAAGCTTATGAGGATGAAGTTGAAAGACTAAATGTAGAAGCAGAAAAACGTATTTCAGAGGTTGAGAGAAACTTTGCTGATGCATTAGAGAAGGAGAGGCGAAAATGCCAGATGGATTATATGGAAGCTGTTAAGAAGCTTGAGGAGAAGTTGGTGTCAAATCAGAAGCAAGACCACGAGGGCCTGGTCAATGGTAAATGCAATGGAGAGGCAGTGAGTGAGGTGCAAGAGTTGCTCCAAAAAGAAATTCACCTTCGAAAGGTGGCTGAAGAGGAGGTGGAAAATCTTAAAAATCAACTGGGGCTATTTACACAATCAGAAGTAGGTGGAAATGCAGAGATTGTAAGGGTTCACAAAATTTTAGAGGAGGAGGCCCGGCATAAGAAGAAACTTGAAGAAGAAATCATTATATTACGTAGTCAGTTATTGCAATTGAATTTTGAAGCTGAACAGATGAGGAGCTGTCTTGATAGAGGCGGGGCTGGAAATGGGTATAGTACTGCAGATTCTTCCATGTCTTCAGTCAGGCATTCTCATCCCAGAGATGTTGGAAATGGACAGAAGGCACCAGTTTCCACACTCTTTGAACAAGTTGGATTGCAAAAGATTTTGTCGTTACTGGAGTCAGAAGATGCTAATGTGCGTATTCATGCCGTAAAAGTAGTGGCCAACCTAGCAGCTGAAGAAACAAACCAGAAAAGGATTGTTGAAGCTGGTGGTCTTACTTCGTTGTTGATGCTTCTTAGGAGCTTTGAGGATGAGACTGTTCGAAGAGTGGCAGCCGGTGCAATTGCGAATCTTGCAATGAATGAAGCCAATCAAGAGCATATAATGGTTCAAGGTGGAATCAGTTTGTTGGCCACGACGGCAGCTGATGCTGATGATGCCCAAACCCTTCGCATGGTTGCTGGAGCTATTGCAAATTTATGCGGCAATGATAAGCTACAAACAAACCTACGGTCGGAAGGTGGTATTAAGGCTTTATTAGGAATTGTAAGGTGCGGGCATCCTGATGTCCTTTCCCAAGTCGCACGTGGAATTGCTAACTTTGCAAAATGCGAGTCCCGAGCATGTACTCAAGGGATAAAGAGCGGAAGATCCATATTGATAGAAGATGGGGCACTTCCATGGATTGTGCAAAATGCCAATGACGAGGCTGCACCTATCCGGCGCCACATTGAGCTTGCACTCTGTCACTTGGCACAGCATGAGGTAAATGCAAAAGACATGATTAGTGGAGGTGCCCTATGGGAGCTGGTTCGTATTTCACGGGACTGTTCACGAGAAGATATAAGGAGTCTTGCTCGTCGGATTTTGAATTCAAGCCCCACTTTCCGTGCAGAACTACGGCGATTACGGATAGACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04144 ko04728 map04144 map04728

Pfam Domains

Protein Families

Arm Kinesin

Protein Analysis

897

Amino Acids

99.0

Weight (kDa)

6.21

Isoelectric Point (pI)

48.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	64 - 208	1.9e-16	Microtubule binding
Kinesin	PF00225	71 - 407	4.2e-96	Kinesin motor domain
ARM_ARMC5	PF24768	662 - 865	3.8e-15	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005615)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01950 AT1G01950 AT1G01950 AT1G01950
fragaria_vesca	FvH4_2g41300 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050
malus_domestica	MD02G1201700.v1.1
prunus_persica	Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1
pyrus_communis	pycom02g16510
rosa_chinensis	RchiOBHm_Chr1g0350761
rosa_laevigata	RLG00000028455
rosa_multiflora	Rmu_sc0006200.1_g000002 Rmu_sc0008591.1_g000001
rosa_roxburghii	Rroxscaffold_4G00304510
rosa_rugosa	Rorug01G0214000
rosa_samantha	Rh1AG228400 Rh1BG197800 Rh1CG213200 Rh1DG225700
rosa_wichuraiana	Rw1G019780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	627, 935
AccB1I	GGYRCC	3 cut(s)	1888, 2493, 2564
AccB7I	CCANNNNNTGG	1 cut(s)	668
AccBSI	CCGCTC	2 cut(s)	125, 2415
AccII	CGCG	1 cut(s)	375
AclWI	GGATC	9 cut(s)	54, 114, 127, 620, 633, 653, 869, 1129, 2415
AcoI	YGGCCR	2 cut(s)	1989, 2181
AcsI	RAATTY	6 cut(s)	335, 1569, 1680, 1759, 2245, 2641
AcuI	CTGAAG	4 cut(s)	46, 1611, 1827, 2025
AcvI	CACGTG	1 cut(s)	2357
AcyI	GRCGYC	3 cut(s)	18, 146, 2494
AdeI	CACNNNGTG	1 cut(s)	184
AfaI	GTAC	7 cut(s)	8, 460, 684, 1189, 1284, 1822, 2398
AfiI	CCNNNNNNNGG	5 cut(s)	116, 668, 1582, 2224, 2284
AflII	CTTAAG	1 cut(s)	287
AjnI	CCWGG	3 cut(s)	26, 726, 1506
AjuI	GAANNNNNNNTTGG	2 cut(s)	1554, 1586
AloI	GAACNNNNNNTCC	2 cut(s)	507, 539
Alw26I	GTCTC	8 cut(s)	111, 557, 580, 586, 599, 1020, 1172, 2078
AlwI	GGATC	9 cut(s)	54, 114, 127, 620, 633, 653, 869, 1129, 2415
Ama87I	CYCGRG	1 cut(s)	2388
AoxI	GGCC	4 cut(s)	1504, 1695, 1989, 2181
ApeKI	GCWGC	9 cut(s)	135, 242, 277, 592, 1318, 2000, 2102, 2192, 2480
ApoI	RAATTY	6 cut(s)	335, 1569, 1680, 1759, 2245, 2641
ArsI	GACNNNNNNTTYG	8 cut(s)	239, 271, 894, 926, 2267, 2299, 2369, 2401
AseI	ATTAAT	1 cut(s)	1041
AspA2I	CCTAGG	1 cut(s)	686
AspLEI	GCGC	2 cut(s)	375, 2496
AspS9I	GGNCC	5 cut(s)	432, 712, 1154, 1504, 1696
AsuC2I	CCSGG	2 cut(s)	189, 1699
AsuHPI	GGTGA	5 cut(s)	49, 758, 875, 884, 1565
AsuII	TTCGAA	2 cut(s)	1579, 2092
AvaI	CYCGRG	1 cut(s)	2388
AvaII	GGWCC	3 cut(s)	432, 712, 1154
AvrII	CCTAGG	1 cut(s)	686
BaeGI	GKGCMC	3 cut(s)	35, 2446, 2569
BalI	TGGCCA	2 cut(s)	1991, 2183
BamHI	GGATCC	2 cut(s)	119, 625
BanI	GGYRCC	3 cut(s)	1888, 2493, 2564
BauI	CACGAG	2 cut(s)	1499, 2604
BbrPI	CACGTG	1 cut(s)	2357
BbsI	GAAGAC	1 cut(s)	1833
BbvI	GCAGC	9 cut(s)	147, 229, 289, 604, 1330, 2012, 2114, 2204, 2467
BccI	CCATC	6 cut(s)	413, 433, 808, 1176, 1429, 2432
BceAI	ACGGC	4 cut(s)	31, 1961, 2205, 2687
BciT130I	CCWGG	3 cut(s)	28, 728, 1508
BcnI	CCSGG	2 cut(s)	189, 1699
BcoDI	GTCTC	8 cut(s)	111, 557, 580, 586, 599, 1020, 1172, 2078
BfaI	CTAG	5 cut(s)	222, 488, 687, 900, 1997
BfmI	CTRYAG	2 cut(s)	590, 1824
BfoI	RGCGCY	1 cut(s)	2497
BfrI	CTTAAG	1 cut(s)	287
BfuAI	ACCTGC	2 cut(s)	627, 935
BglI	GCCNNNNNGGC	1 cut(s)	2189
BlnI	CCTAGG	1 cut(s)	686
BlpI	GCTNAGC	1 cut(s)	393
BmcAI	AGTACT	1 cut(s)	1822
Bme1390I	CCNGG	5 cut(s)	28, 189, 728, 1508, 1699
Bme18I	GGWCC	3 cut(s)	432, 712, 1154
BmeT110I	CYCGRG	1 cut(s)	2388
BmgT120I	GGNCC	5 cut(s)	432, 712, 1154, 1504, 1696
BmiI	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2495, 2566
BmrFI	CCNGG	5 cut(s)	28, 189, 728, 1508, 1699
BmrI	ACTGGG	1 cut(s)	1631
BmsI	GCATC	7 cut(s)	966, 1393, 1945, 2049, 2188, 2197, 2338
BmuI	ACTGGG	1 cut(s)	1631
BpiI	GAAGAC	1 cut(s)	1833
BplI	GAGNNNNNCTC	2 cut(s)	2611, 2643
BpmI	CTGGAG	4 cut(s)	690, 749, 1964, 2253
Bpu1102I	GCTNAGC	1 cut(s)	393
Bpu14I	TTCGAA	2 cut(s)	1579, 2092
BpuEI	CTTGAG	2 cut(s)	1484, 2385
BpuMI	CCSGG	2 cut(s)	189, 1699
BsaAI	YACGTR	2 cut(s)	1739, 2357
BsaHI	GRCGYC	3 cut(s)	18, 146, 2494
BsaI	GGTCTC	1 cut(s)	599
BsaJI	CCNNGG	3 cut(s)	27, 686, 2450
BsaXI	ACNNNNNCTCC	2 cut(s)	1521, 1551
Bsc4I	CCNNNNNNNGG	5 cut(s)	116, 668, 1582, 2224, 2284
Bse118I	RCCGGY	1 cut(s)	2105
Bse1I	ACTGG	6 cut(s)	673, 715, 1293, 1626, 1892, 1947
Bse3DI	GCAATG	5 cut(s)	537, 759, 1531, 2133, 2263
BseBI	CCWGG	3 cut(s)	28, 728, 1508
BseDI	CCNNGG	3 cut(s)	27, 686, 2450
BseGI	GGATG	5 cut(s)	957, 1342, 1858, 2086, 2329
BseLI	CCNNNNNNNGG	5 cut(s)	116, 668, 1582, 2224, 2284
BseMI	GCAATG	5 cut(s)	537, 759, 1531, 2133, 2263
BseNI	ACTGG	6 cut(s)	673, 715, 1293, 1626, 1892, 1947
BseRI	GAGGAG	7 cut(s)	248, 1188, 1481, 1610, 1703, 1706, 1795
BseSI	GKGCMC	3 cut(s)	35, 2446, 2569
BseXI	GCAGC	9 cut(s)	147, 229, 289, 604, 1330, 2012, 2114, 2204, 2467
BsgI	GTGCAG	2 cut(s)	2466, 2682
Bsh1236I	CGCG	1 cut(s)	375
Bsh1285I	CGRYCG	1 cut(s)	2285
BshFI	GGCC	4 cut(s)	1506, 1697, 1991, 2183
BshNI	GGYRCC	3 cut(s)	1888, 2493, 2564
BsiEI	CGRYCG	1 cut(s)	2285
BsiHKCI	CYCGRG	1 cut(s)	2388
BsiSI	CCGG	7 cut(s)	117, 143, 188, 281, 1699, 2106, 2491
BslFI	GGGAC	5 cut(s)	332, 445, 993, 2371, 2609
BslI	CCNNNNNNNGG	5 cut(s)	116, 668, 1582, 2224, 2284
BsmAI	GTCTC	8 cut(s)	111, 557, 580, 586, 599, 1020, 1172, 2078
BsmBI	CGTCTC	1 cut(s)	111
BsmFI	GGGAC	5 cut(s)	332, 445, 993, 2371, 2609
BsmI	GAATGC	1 cut(s)	1852
BsnI	GGCC	4 cut(s)	1506, 1697, 1991, 2183
Bso31I	GGTCTC	1 cut(s)	599
BsoBI	CYCGRG	1 cut(s)	2388
Bsp119I	TTCGAA	2 cut(s)	1579, 2092
Bsp1286I	GDGCHC	3 cut(s)	35, 2446, 2569
Bsp143I	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2420
Bsp1720I	GCTNAGC	1 cut(s)	393
Bsp19I	CCATGG	1 cut(s)	2450
BspANI	GGCC	4 cut(s)	1506, 1697, 1991, 2183
BspFNI	CGCG	1 cut(s)	375
BspLI	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2495, 2566
BspMAI	CTGCAG	2 cut(s)	594, 1828
BspMI	ACCTGC	2 cut(s)	627, 935
BspPI	GGATC	9 cut(s)	54, 114, 127, 620, 633, 653, 869, 1129, 2415
BspT104I	TTCGAA	2 cut(s)	1579, 2092
BspT107I	GGYRCC	3 cut(s)	1888, 2493, 2564
BspTI	CTTAAG	1 cut(s)	287
BspTNI	GGTCTC	1 cut(s)	599
BsrBI	CCGCTC	2 cut(s)	125, 2415
BsrDI	GCAATG	5 cut(s)	537, 759, 1531, 2133, 2263
BsrFI	RCCGGY	1 cut(s)	2105
BsrI	ACTGG	6 cut(s)	673, 715, 1293, 1626, 1892, 1947
BssAI	RCCGGY	1 cut(s)	2105
BssECI	CCNNGG	3 cut(s)	27, 686, 2450
BssMI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2420
BssNI	GRCGYC	3 cut(s)	18, 146, 2494
BssSI	CACGAG	2 cut(s)	1499, 2604
BssT1I	CCWWGG	2 cut(s)	686, 2450
Bst2BI	CACGAG	2 cut(s)	1499, 2604
Bst2UI	CCWGG	3 cut(s)	28, 728, 1508
Bst4CI	ACNGT	7 cut(s)	37, 266, 436, 697, 2089, 2283, 2600
Bst6I	CTCTTC	4 cut(s)	187, 1239, 1587, 2089
BstACI	GRCGYC	3 cut(s)	18, 146, 2494
BstAFI	CTTAAG	1 cut(s)	287
BstAPI	GCANNNNNTGC	4 cut(s)	257, 1555, 2108, 2198
BstBAI	YACGTR	2 cut(s)	1739, 2357
BstBI	TTCGAA	2 cut(s)	1579, 2092
BstC8I	GCNNGC	2 cut(s)	2327, 2508
BstDEI	CTNAG	4 cut(s)	393, 1019, 1103, 2066
BstDSI	CCRYGG	1 cut(s)	2450
BstENI	CCTNNNNNAGG	1 cut(s)	1580
BstF5I	GGATG	5 cut(s)	957, 1342, 1858, 2086, 2329
BstFNI	CGCG	1 cut(s)	375
BstH2I	RGCGCY	1 cut(s)	2497
BstHHI	GCGC	2 cut(s)	375, 2496
BstKTI	GATC	9 cut(s)	49, 122, 178, 511, 628, 661, 877, 1124, 2423
BstMAI	GTCTC	8 cut(s)	111, 557, 580, 586, 599, 1020, 1172, 2078
BstMBI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2420
BstMCI	CGRYCG	1 cut(s)	2285
BstNI	CCWGG	3 cut(s)	28, 728, 1508
BstNSI	RCATGY	1 cut(s)	2397
BstSCI	CCNGG	5 cut(s)	26, 187, 726, 1506, 1697
BstSFI	CTRYAG	2 cut(s)	590, 1824
BstSLI	GKGCMC	3 cut(s)	35, 2446, 2569
BstSNI	TACGTA	1 cut(s)	1739
BstUI	CGCG	1 cut(s)	375
BstV1I	GCAGC	9 cut(s)	147, 229, 289, 604, 1330, 2012, 2114, 2204, 2467
BstV2I	GAAGAC	1 cut(s)	1833
BstX2I	RGATCY	4 cut(s)	119, 625, 658, 2420
BstYI	RGATCY	4 cut(s)	119, 625, 658, 2420
BsuRI	GGCC	4 cut(s)	1506, 1697, 1991, 2183
BtgI	CCRYGG	1 cut(s)	2450
BtgZI	GCGATG	1 cut(s)	740
BtsCI	GGATG	5 cut(s)	957, 1342, 1858, 2086, 2329
BtsI	GCAGTG	2 cut(s)	189, 1542
BtsIMutI	CAGTG	3 cut(s)	189, 321, 1542
BveI	ACCTGC	2 cut(s)	627, 935
Cac8I	GCNNGC	2 cut(s)	2327, 2508
CfoI	GCGC	2 cut(s)	375, 2496
Cfr10I	RCCGGY	1 cut(s)	2105
Cfr13I	GGNCC	5 cut(s)	432, 712, 1154, 1504, 1696
CseI	GACGC	5 cut(s)	7, 135, 257, 351, 364
Csp6I	GTAC	7 cut(s)	7, 459, 683, 1188, 1283, 1821, 2397
CspCI	CAANNNNNGTGG	2 cut(s)	1888, 1923
CviQI	GTAC	7 cut(s)	7, 459, 683, 1188, 1283, 1821, 2397
DdeI	CTNAG	4 cut(s)	393, 1019, 1103, 2066
DinI	GGCGCC	1 cut(s)	2495
DpnI	GATC	9 cut(s)	48, 121, 177, 510, 627, 660, 876, 1123, 2422
DpnII	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2420
DraIII	CACNNNGTG	1 cut(s)	184
EaeI	YGGCCR	2 cut(s)	1989, 2181
Eam1104I	CTCTTC	4 cut(s)	187, 1239, 1587, 2089
EarI	CTCTTC	4 cut(s)	187, 1239, 1587, 2089
EciI	GGCGGA	1 cut(s)	119
Eco105I	TACGTA	1 cut(s)	1739
Eco130I	CCWWGG	2 cut(s)	686, 2450
Eco31I	GGTCTC	1 cut(s)	599
Eco32I	GATATC	1 cut(s)	706
Eco47I	GGWCC	3 cut(s)	432, 712, 1154
Eco57I	CTGAAG	4 cut(s)	46, 1611, 1827, 2025
Eco72I	CACGTG	1 cut(s)	2357
Eco88I	CYCGRG	1 cut(s)	2388
EcoNI	CCTNNNNNAGG	1 cut(s)	1580
EcoO109I	RGGNCCY	1 cut(s)	1504
EcoRI	GAATTC	1 cut(s)	2641
EcoRII	CCWGG	3 cut(s)	26, 726, 1506
EcoRV	GATATC	1 cut(s)	706
EcoT14I	CCWWGG	2 cut(s)	686, 2450
EcoT22I	ATGCAT	1 cut(s)	1408
EgeI	GGCGCC	1 cut(s)	2495
EheI	GGCGCC	1 cut(s)	2495
ErhI	CCWWGG	2 cut(s)	686, 2450
Esp3I	CGTCTC	1 cut(s)	111
FalI	AAGNNNNNCTT	2 cut(s)	2638, 2670
FaqI	GGGAC	5 cut(s)	332, 445, 993, 2371, 2609
FauI	CCCGC	3 cut(s)	118, 1793, 2318
FauNDI	CATATG	1 cut(s)	984
FokI	GGATG	5 cut(s)	944, 1349, 1845, 2093, 2316
FspBI	CTAG	5 cut(s)	222, 488, 687, 900, 1997
GlaI	GCGC	2 cut(s)	374, 2495
GsuI	CTGGAG	4 cut(s)	690, 749, 1964, 2253
HaeII	RGCGCY	1 cut(s)	2497
HaeIII	GGCC	4 cut(s)	1506, 1697, 1991, 2183
HapII	CCGG	7 cut(s)	117, 143, 188, 281, 1699, 2106, 2491
HgaI	GACGC	5 cut(s)	7, 135, 257, 351, 364
HhaI	GCGC	2 cut(s)	375, 2496
Hin1I	GRCGYC	3 cut(s)	18, 146, 2494
Hin6I	GCGC	2 cut(s)	373, 2494
HinP1I	GCGC	2 cut(s)	373, 2494
HindIII	AAGCTT	5 cut(s)	1088, 1274, 1295, 1326, 1460
HpaII	CCGG	7 cut(s)	117, 143, 188, 281, 1699, 2106, 2491
HphI	GGTGA	5 cut(s)	49, 758, 875, 884, 1565
Hpy166II	GTNNAC	2 cut(s)	1675, 2603
Hpy8I	GTNNAC	2 cut(s)	1675, 2603
Hpy99I	CGWCG	7 cut(s)	23, 76, 151, 251, 367, 2191, 2634
HpyAV	CCTTC	9 cut(s)	888, 906, 1167, 1210, 1408, 1586, 1879, 2228, 2282
HpyCH4III	ACNGT	7 cut(s)	37, 266, 436, 697, 2089, 2283, 2600
HpyCH4IV	ACGT	3 cut(s)	1372, 1738, 2356
HpyF3I	CTNAG	4 cut(s)	393, 1019, 1103, 2066
HpySE526I	ACGT	3 cut(s)	1372, 1738, 2356
Hsp92I	GRCGYC	3 cut(s)	18, 146, 2494
HspAI	GCGC	2 cut(s)	373, 2494
KasI	GGCGCC	1 cut(s)	2493
Kzo9I	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2420
LmnI	GCTCC	9 cut(s)	96, 161, 283, 730, 1563, 1782, 2070, 2234, 2575
Lsp1109I	GCAGC	9 cut(s)	147, 229, 289, 604, 1330, 2012, 2114, 2204, 2467
LweI	GCATC	7 cut(s)	966, 1393, 1945, 2049, 2188, 2197, 2338
MaeI	CTAG	5 cut(s)	222, 488, 687, 900, 1997
MaeII	ACGT	3 cut(s)	1372, 1738, 2356
MaeIII	GTNAC	4 cut(s)	422, 1144, 1938, 2516
MalI	GATC	9 cut(s)	48, 121, 177, 510, 627, 660, 876, 1123, 2422
MbiI	CCGCTC	2 cut(s)	125, 2415
MboI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2420
MfeI	CAATTG	3 cut(s)	313, 1754, 2112
MflI	RGATCY	4 cut(s)	119, 625, 658, 2420
MhlI	GDGCHC	3 cut(s)	35, 2446, 2569
MlsI	TGGCCA	2 cut(s)	1991, 2183
MluNI	TGGCCA	2 cut(s)	1991, 2183
Mly113I	GGCGCC	1 cut(s)	2494
MlyI	GAGTC	4 cut(s)	245, 1955, 2393, 2629
MmeI	TCCRAC	4 cut(s)	1852, 1897, 2265, 2612
Mox20I	TGGCCA	2 cut(s)	1991, 2183
Mph1103I	ATGCAT	1 cut(s)	1408
MscI	TGGCCA	2 cut(s)	1991, 2183
MseI	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2298
MslI	CAYNNNNRTG	2 cut(s)	2334, 2449
Msp20I	TGGCCA	2 cut(s)	1991, 2183
MspA1I	CMGCKG	2 cut(s)	2003, 2195
MspCI	CTTAAG	1 cut(s)	287
MspI	CCGG	7 cut(s)	117, 143, 188, 281, 1699, 2106, 2491
MspR9I	CCNGG	5 cut(s)	28, 189, 728, 1508, 1699
MunI	CAATTG	3 cut(s)	313, 1754, 2112
Mva1269I	GAATGC	1 cut(s)	1852
MvaI	CCWGG	3 cut(s)	28, 728, 1508
MvnI	CGCG	1 cut(s)	375
NarI	GGCGCC	1 cut(s)	2494
NciI	CCSGG	2 cut(s)	189, 1699
NcoI	CCATGG	1 cut(s)	2450
NdeI	CATATG	1 cut(s)	984
NdeII	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2420
NlaIV	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2495, 2566
NmeAIII	GCCGAG	1 cut(s)	1078
NmuCI	GTSAC	1 cut(s)	2516
NsiI	ATGCAT	1 cut(s)	1408
NspI	RCATGY	1 cut(s)	2397
NspV	TTCGAA	2 cut(s)	1579, 2092
PctI	GAATGC	1 cut(s)	1852
PfeI	GAWTC	9 cut(s)	516, 569, 788, 808, 1082, 1109, 1829, 2119, 2169
PflMI	CCANNNNNTGG	1 cut(s)	668
PfoI	TCCNGGA	1 cut(s)	726
PleI	GAGTC	4 cut(s)	244, 1954, 2392, 2628
PluTI	GGCGCC	1 cut(s)	2497
PmaCI	CACGTG	1 cut(s)	2357
PmlI	CACGTG	1 cut(s)	2357
PpsI	GAGTC	4 cut(s)	244, 1954, 2392, 2628
Ppu21I	YACGTR	2 cut(s)	1739, 2357
PshBI	ATTAAT	1 cut(s)	1041
Psp6I	CCWGG	3 cut(s)	26, 726, 1506
PspCI	CACGTG	1 cut(s)	2357
PspGI	CCWGG	3 cut(s)	26, 726, 1506
PspN4I	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2495, 2566
PspPI	GGNCC	5 cut(s)	432, 712, 1154, 1504, 1696
PstI	CTGCAG	2 cut(s)	594, 1828
PsuI	RGATCY	4 cut(s)	119, 625, 658, 2420
PvuII	CAGCTG	2 cut(s)	2003, 2195
RsaI	GTAC	7 cut(s)	8, 460, 684, 1189, 1284, 1822, 2398
RsaNI	GTAC	7 cut(s)	7, 459, 683, 1188, 1283, 1821, 2397
RseI	CAYNNNNRTG	2 cut(s)	2334, 2449
SaqAI	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2298
Sau3AI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2420
Sau96I	GGNCC	5 cut(s)	432, 712, 1154, 1504, 1696
ScaI	AGTACT	1 cut(s)	1822
SchI	GAGTC	4 cut(s)	245, 1955, 2393, 2629
ScrFI	CCNGG	5 cut(s)	28, 189, 728, 1508, 1699
SduI	GDGCHC	3 cut(s)	35, 2446, 2569
SfaNI	GCATC	7 cut(s)	966, 1393, 1945, 2049, 2188, 2197, 2338
SfcI	CTRYAG	2 cut(s)	590, 1824
SfoI	GGCGCC	1 cut(s)	2495
SfuI	TTCGAA	2 cut(s)	1579, 2092
SinI	GGWCC	3 cut(s)	432, 712, 1154
SmiMI	CAYNNNNRTG	2 cut(s)	2334, 2449
SmlI	CTYRAG	3 cut(s)	287, 1463, 2400
SmoI	CTYRAG	3 cut(s)	287, 1463, 2400
SnaBI	TACGTA	1 cut(s)	1739
SspDI	GGCGCC	1 cut(s)	2493
SspI	AATATT	1 cut(s)	643
SspMI	CTAG	5 cut(s)	222, 488, 687, 900, 1997
StyD4I	CCNGG	5 cut(s)	26, 187, 726, 1506, 1697
StyI	CCWWGG	2 cut(s)	686, 2450
TaaI	ACNGT	7 cut(s)	37, 266, 436, 697, 2089, 2283, 2600
TaiI	ACGT	3 cut(s)	1375, 1741, 2359
TaqI	TCGA	5 cut(s)	860, 1171, 1268, 1579, 2092
TatI	WGTACW	3 cut(s)	1282, 1820, 2396
TauI	GCSGC	5 cut(s)	26, 116, 135, 767, 2256
TfiI	GAWTC	9 cut(s)	516, 569, 788, 808, 1082, 1109, 1829, 2119, 2169
Tru1I	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2298
Tru9I	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2298
TscAI	CASTG	3 cut(s)	189, 328, 1542
TseFI	GTSAC	1 cut(s)	2516
TseI	GCWGC	9 cut(s)	135, 242, 277, 592, 1318, 2000, 2102, 2192, 2480
Tsp45I	GTSAC	1 cut(s)	2516
TspDTI	ATGAA	8 cut(s)	396, 1101, 1229, 1326, 1353, 1961, 2144, 2148
TspGWI	ACGGA	2 cut(s)	93, 2648
TspRI	CASTG	3 cut(s)	189, 328, 1542
Van91I	CCANNNNNTGG	1 cut(s)	668
Vha464I	CTTAAG	1 cut(s)	287
VpaK11BI	GGWCC	3 cut(s)	432, 712, 1154
VspI	ATTAAT	1 cut(s)	1041
XagI	CCTNNNNNAGG	1 cut(s)	1580
XapI	RAATTY	6 cut(s)	335, 1569, 1680, 1759, 2245, 2641
XbaI	TCTAGA	1 cut(s)	899
XceI	RCATGY	1 cut(s)	2397
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2354
XmaJI	CCTAGG	1 cut(s)	686
XspI	CTAG	5 cut(s)	222, 488, 687, 900, 1997
ZrmI	AGTACT	1 cut(s)	1822
Zsp2I	ATGCAT	1 cut(s)	1408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.