Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0005615

Physical Location & Seq

Genomic Coordinates Reverse (-)

43067416 .. 43075493

Gene Structure 8078 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G019780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2670 bp

ATGGCGTACCGAAACGGCGTCGCCGCCAGGGGCACGGTGAAGCTGGATCGCCCCGTCAGCTTCAGAACCTCGTCGTCTTTCAAGTCCAAGCTCCCTCCCTCTCCATCCCCCGCCGCCGGATCCGCTCTCCGCCGCAGCAGTCCGGCCTCGTTCGGCTCCGCTTCTAACAAAGACGATCACGCAGTGCCGGGAAGAGTTAGAGTAGCTGTAAGATTGCGACCTAGAAATGCGGAGGAGTCGGCTGCCGACGCAGATTTTGCTGACTGTGTGGAGTTGCAGCCGGAGCTTAAGAGGTTGAAGCTTCGGAAGAACAATTGGGACACTGACACCTACGAGTTTGATGATGTGCTTACTGAATATGCGTCGCAGAAGCGCGTCTATGAAGTTGTTGCTAAGCCTGTTGTGGAGAGTGTTTTAGATGGTTACAATGGGACCGTGATGGCTTATGGTCAGACGGGTACGGGGAAAACATTTACTCTAGGACGACTAGGAGAAGAAGATACTTCTGATCGTGGAATCATGGTTCGTGCAATGGAGGACATTTTAGCTGATATATCTTTAGAGACTGATTCTGTCTCTGTCTCGTATCTGCAGACCTGCTGGATCCAGCAAATGATAATATTCCCATTGTTGAAGATCCAAAAACTGGATGTTTCAGTACCTAGGGCAACTGTTGTAGATATCAAGGACCAGTTAAGTTTCCTGGAGCTGTTAAGAGTTGGTGAAGCTCATCGCATTGCCGCTAATACAAAGTTGAATACTGAATCTTCTCGCAGTCATGCGATTCTGATGGTAAATGTTAAGAGGTGTGTTATGGGAAGTGAAGATAATGTTTCGAGTGAAAATGGTGATCCTTCTCACTTGACCAAGCCTTCTAGACCACTTGTTCGGAAAAGCAAACTTGTTGTTGTAGATTTGGCAGGTTCGGAACGCATCCAGAAATCAGGAAGTGAGGGACATATGTTAGAGGAAGCCAAGTGTATCAATCTGTCTCTTAGTGCATTAGGGAAGTGTATTAATTCTCTAGCCGAGAATAGTAGTCATGTTCCATTTCGTGATTCAAAGCTTACAAGATTGCTTAGAGACTCATTTGGAGGATCAGCGAGGACTTCACTAATTGTTACCATTGGTCCTTCTCCACGCCATCGAGGAGAGACTTCAAGTACCATACTATTTGGGCAAAGGGCTATGAAGGTGGAAAATATGTTGAAAATAAAGGAAGAGTTTGATTACAAAAGTTTGTCGAGAAAGCTTGAAGTACAACTGGATAAGCTTATTGCAGAAAATGAAAGGCAGCATAAAGCTTATGAGGATGAAGTTGAAAGACTAAATGTAGAAGCAGAAAAACGTATTTCAGAGGTTGAGAGAAACTTTGCTGATGCATTAGAGAAGGAGAGGCGAAAATGCCAGATGGATTATATGGAAGCTGTTAAGAAGCTTGAGGAGAAGTTGGTGTCAAATCAGAAGCAAGACCACGAGGGCCTGGTCAATGGTAAATGCAATGGAGAGGAAGTGAGTGAGGTGCAAGAGTTGCTCCAAAAAGAAATTCACCTTCGAAAGGTGGCTGAAGAGGAGGTGGAAAATCTTAAAATTCAACTGGGGCTATTTACACAATCGGAAGTAGGTGGAAATGCAGAGATTGTAAGGGTTCACAAAATTTTAGAGGAGGAGGCCCGGCATAAGAAGAAACTTGAAGAAGAAATCATTATATTACGTAGTCAGTTATTGCAATTGAATTTTGAAGCTGAACAGATGAGGAGCTGTCTTGATAGAGGCGGGGCTGGAAATGGGTATAGTACTGCAGATTCTTCCATGTCTTCAGTCAGGCATCCTCATCCCAGAGATGTTGGAAATGGACAGAAGGCACCAGTTTCCACACTCTTTGAACAAGTTGGATTGCAAAAGATTTTGTCGTTACTGGAGTCAGAAGATGCTAACGTGCGTATTCATGCCGTAAAAGTAGTGGCCAACCTAGCAGCTGAAGAAACAAACCAGAAAAGGATTGTTGAAGCTGGTGGTCTTACTTCGTTGTTGATGCTTCTTAGGAGCTTTGAGGATGAGACTGTTCGAAGAGTGGCAGCCGGTGCAATTGCGAATCTTGCAATGAATGAAGCCAATCAAGAGCATATAATGGTTCAAGGTGGAATCAGTTTGTTGGCCACGACGGCAGCTGATGCTGATGATGCCCAAACCCTTCGCATGGTTGCTGGAGCTATTGCAAATTTATGCGGCAATGATAAGCTACAAACAAACCTACGGTCTGAAGGTGGTATTAAGGCTTTATTAGGAATTGTAAGGTGCGGGCATCCTGATGTCCTTTCCCAAGTCGCACGTGGAATTGCTAACTTTGCAAAATGCGAGTCCCGAGCATGTACTCAAGGGATAAAGAGCGGAAGATCCATATTGATAGAAGATGGGGCACTTCCATGGATTGTGCAAAATGCCAATGACGAGGCTGCACCTATCCGGCGCCACATTGAACTTGCACTCTGTCACTTGGCACAGCATGAGGTAAATGCAAAAGACATGATTAGTGGAGGTGCCCTATGGGAGCTAGTTCGTATTTCACGGGACTGTTCACGAGAAGACATAAGGAGTCTTGCTCGTCGGATTTTGAATTCAAGCCCCACTTTCCGTGCAGAACTACGGCGATTACGGATAGACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04144 ko04728 map04144 map04728

Pfam Domains

Protein Families

Arm Kinesin

Protein Analysis

889

Amino Acids

98.37

Weight (kDa)

6.74

Isoelectric Point (pI)

47.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	64 - 188	7.4e-14	Microtubule binding
Kinesin	PF00225	71 - 399	1.1e-82	Kinesin motor domain
ARM_ARMC5	PF24768	654 - 857	4.1e-15	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005615)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01950 AT1G01950 AT1G01950 AT1G01950
fragaria_vesca	FvH4_2g41300 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050
malus_domestica	MD02G1201700.v1.1
prunus_persica	Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1
pyrus_communis	pycom02g16510
rosa_chinensis	RchiOBHm_Chr1g0350761
rosa_laevigata	RLG00000028455
rosa_multiflora	Rmu_sc0006200.1_g000002 Rmu_sc0008591.1_g000001
rosa_roxburghii	Rroxscaffold_4G00304510
rosa_rugosa	Rorug01G0214000
rosa_samantha	Rh1AG228400 Rh1BG197800 Rh1CG213200 Rh1DG225700
rosa_wichuraiana	Rw1G019780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	605, 911
AccB1I	GGYRCC	3 cut(s)	1864, 2469, 2540
AccB7I	CCANNNNNTGG	1 cut(s)	646
AccBSI	CCGCTC	2 cut(s)	125, 2391
AccII	CGCG	1 cut(s)	375
AclWI	GGATC	9 cut(s)	54, 114, 127, 598, 611, 631, 845, 1105, 2391
AcoI	YGGCCR	2 cut(s)	1965, 2157
AcsI	RAATTY	6 cut(s)	1545, 1590, 1656, 1735, 2221, 2617
AcuI	CTGAAG	5 cut(s)	46, 1587, 1803, 2001, 2283
AcvI	CACGTG	1 cut(s)	2333
AcyI	GRCGYC	2 cut(s)	18, 2470
AdeI	CACNNNGTG	1 cut(s)	184
AfaI	GTAC	7 cut(s)	8, 460, 660, 1165, 1260, 1798, 2374
AfiI	CCNNNNNNNGG	4 cut(s)	116, 646, 1558, 2200
AflII	CTTAAG	1 cut(s)	287
AjnI	CCWGG	3 cut(s)	26, 702, 1482
AjuI	GAANNNNNNNTTGG	2 cut(s)	1530, 1562
AloI	GAACNNNNNNTCC	2 cut(s)	507, 539
Alw26I	GTCTC	7 cut(s)	557, 580, 586, 996, 1077, 1148, 2054
AlwI	GGATC	9 cut(s)	54, 114, 127, 598, 611, 631, 845, 1105, 2391
Ama87I	CYCGRG	1 cut(s)	2364
AoxI	GGCC	5 cut(s)	144, 1480, 1671, 1965, 2157
ApeKI	GCWGC	8 cut(s)	135, 242, 277, 1294, 1976, 2078, 2168, 2456
ApoI	RAATTY	6 cut(s)	1545, 1590, 1656, 1735, 2221, 2617
ArsI	GACNNNNNNTTYG	8 cut(s)	239, 271, 870, 902, 2243, 2275, 2345, 2377
AseI	ATTAAT	1 cut(s)	1017
AspA2I	CCTAGG	1 cut(s)	662
AspLEI	GCGC	2 cut(s)	375, 2472
AspS9I	GGNCC	5 cut(s)	432, 688, 1130, 1480, 1672
AsuC2I	CCSGG	2 cut(s)	189, 1675
AsuHPI	GGTGA	4 cut(s)	49, 734, 860, 1541
AsuII	TTCGAA	2 cut(s)	1555, 2068
AvaI	CYCGRG	1 cut(s)	2364
AvaII	GGWCC	3 cut(s)	432, 688, 1130
AvrII	CCTAGG	1 cut(s)	662
BaeGI	GKGCMC	3 cut(s)	35, 2422, 2545
BalI	TGGCCA	2 cut(s)	1967, 2159
BamHI	GGATCC	2 cut(s)	119, 603
BanI	GGYRCC	3 cut(s)	1864, 2469, 2540
BauI	CACGAG	2 cut(s)	1475, 2580
BbrPI	CACGTG	1 cut(s)	2333
BbsI	GAAGAC	2 cut(s)	1809, 2592
BbvI	GCAGC	8 cut(s)	147, 229, 289, 1306, 1988, 2090, 2180, 2443
BccI	CCATC	7 cut(s)	112, 413, 433, 784, 1152, 1405, 2408
BceAI	ACGGC	4 cut(s)	31, 1937, 2181, 2663
BciT130I	CCWGG	3 cut(s)	28, 704, 1484
BcnI	CCSGG	2 cut(s)	189, 1675
BcoDI	GTCTC	7 cut(s)	557, 580, 586, 996, 1077, 1148, 2054
BfaI	CTAG	8 cut(s)	222, 479, 488, 663, 876, 1025, 1973, 2555
BfmI	CTRYAG	2 cut(s)	590, 1800
BfoI	RGCGCY	1 cut(s)	2473
BfrI	CTTAAG	1 cut(s)	287
BfuAI	ACCTGC	2 cut(s)	605, 911
BglI	GCCNNNNNGGC	1 cut(s)	2165
BlnI	CCTAGG	1 cut(s)	662
BlpI	GCTNAGC	1 cut(s)	393
BmcAI	AGTACT	1 cut(s)	1798
Bme1390I	CCNGG	5 cut(s)	28, 189, 704, 1484, 1675
Bme18I	GGWCC	3 cut(s)	432, 688, 1130
BmeT110I	CYCGRG	1 cut(s)	2364
BmgT120I	GGNCC	5 cut(s)	432, 688, 1130, 1480, 1672
BmiI	GGNNCC	7 cut(s)	121, 157, 433, 605, 1866, 2471, 2542
BmrFI	CCNGG	5 cut(s)	28, 189, 704, 1484, 1675
BmrI	ACTGGG	1 cut(s)	1607
BmsI	GCATC	8 cut(s)	942, 1369, 1837, 1921, 2025, 2164, 2173, 2314
BmuI	ACTGGG	1 cut(s)	1607
BpiI	GAAGAC	2 cut(s)	1809, 2592
BplI	GAGNNNNNCTC	2 cut(s)	2587, 2619
BpmI	CTGGAG	3 cut(s)	725, 1940, 2229
Bpu1102I	GCTNAGC	1 cut(s)	393
Bpu14I	TTCGAA	2 cut(s)	1555, 2068
BpuEI	CTTGAG	2 cut(s)	1460, 2361
BpuMI	CCSGG	2 cut(s)	189, 1675
BsaAI	YACGTR	2 cut(s)	1715, 2333
BsaHI	GRCGYC	2 cut(s)	18, 2470
BsaJI	CCNNGG	3 cut(s)	27, 662, 2426
BsaXI	ACNNNNNCTCC	2 cut(s)	1497, 1527
Bsc4I	CCNNNNNNNGG	4 cut(s)	116, 646, 1558, 2200
Bse118I	RCCGGY	1 cut(s)	2081
Bse1I	ACTGG	6 cut(s)	651, 691, 1269, 1602, 1868, 1923
Bse3DI	GCAATG	5 cut(s)	537, 735, 1507, 2109, 2239
BseBI	CCWGG	3 cut(s)	28, 704, 1484
BseDI	CCNNGG	3 cut(s)	27, 662, 2426
BseGI	GGATG	8 cut(s)	104, 655, 933, 1318, 1828, 1834, 2062, 2305
BseLI	CCNNNNNNNGG	4 cut(s)	116, 646, 1558, 2200
BseMI	GCAATG	5 cut(s)	537, 735, 1507, 2109, 2239
BseNI	ACTGG	6 cut(s)	651, 691, 1269, 1602, 1868, 1923
BseRI	GAGGAG	7 cut(s)	248, 1164, 1457, 1586, 1679, 1682, 1771
BseSI	GKGCMC	3 cut(s)	35, 2422, 2545
BseXI	GCAGC	8 cut(s)	147, 229, 289, 1306, 1988, 2090, 2180, 2443
BsgI	GTGCAG	2 cut(s)	2442, 2658
Bsh1236I	CGCG	1 cut(s)	375
BshFI	GGCC	5 cut(s)	146, 1482, 1673, 1967, 2159
BshNI	GGYRCC	3 cut(s)	1864, 2469, 2540
BsiHKCI	CYCGRG	1 cut(s)	2364
BsiSI	CCGG	7 cut(s)	117, 143, 188, 281, 1675, 2082, 2467
BslFI	GGGAC	5 cut(s)	332, 445, 969, 2347, 2585
BslI	CCNNNNNNNGG	4 cut(s)	116, 646, 1558, 2200
BsmAI	GTCTC	7 cut(s)	557, 580, 586, 996, 1077, 1148, 2054
BsmFI	GGGAC	5 cut(s)	332, 445, 969, 2347, 2585
BsnI	GGCC	5 cut(s)	146, 1482, 1673, 1967, 2159
BsoBI	CYCGRG	1 cut(s)	2364
Bsp119I	TTCGAA	2 cut(s)	1555, 2068
Bsp1286I	GDGCHC	3 cut(s)	35, 2422, 2545
Bsp143I	GATC	9 cut(s)	46, 119, 175, 508, 603, 636, 850, 1097, 2396
Bsp1720I	GCTNAGC	1 cut(s)	393
Bsp19I	CCATGG	1 cut(s)	2426
BspANI	GGCC	5 cut(s)	146, 1482, 1673, 1967, 2159
BspFNI	CGCG	1 cut(s)	375
BspLI	GGNNCC	7 cut(s)	121, 157, 433, 605, 1866, 2471, 2542
BspMAI	CTGCAG	2 cut(s)	594, 1804
BspMI	ACCTGC	2 cut(s)	605, 911
BspPI	GGATC	9 cut(s)	54, 114, 127, 598, 611, 631, 845, 1105, 2391
BspT104I	TTCGAA	2 cut(s)	1555, 2068
BspT107I	GGYRCC	3 cut(s)	1864, 2469, 2540
BspTI	CTTAAG	1 cut(s)	287
BsrBI	CCGCTC	2 cut(s)	125, 2391
BsrDI	GCAATG	5 cut(s)	537, 735, 1507, 2109, 2239
BsrFI	RCCGGY	1 cut(s)	2081
BsrI	ACTGG	6 cut(s)	651, 691, 1269, 1602, 1868, 1923
BssAI	RCCGGY	1 cut(s)	2081
BssECI	CCNNGG	3 cut(s)	27, 662, 2426
BssMI	GATC	9 cut(s)	46, 119, 175, 508, 603, 636, 850, 1097, 2396
BssNI	GRCGYC	2 cut(s)	18, 2470
BssSI	CACGAG	2 cut(s)	1475, 2580
BssT1I	CCWWGG	2 cut(s)	662, 2426
Bst2BI	CACGAG	2 cut(s)	1475, 2580
Bst2UI	CCWGG	3 cut(s)	28, 704, 1484
Bst4CI	ACNGT	7 cut(s)	37, 266, 436, 673, 2065, 2259, 2576
Bst6I	CTCTTC	4 cut(s)	187, 1215, 1563, 2065
BstACI	GRCGYC	2 cut(s)	18, 2470
BstAFI	CTTAAG	1 cut(s)	287
BstAPI	GCANNNNNTGC	4 cut(s)	257, 1531, 2084, 2174
BstBAI	YACGTR	2 cut(s)	1715, 2333
BstBI	TTCGAA	2 cut(s)	1555, 2068
BstC8I	GCNNGC	1 cut(s)	2303
BstDEI	CTNAG	4 cut(s)	393, 995, 1079, 2042
BstDSI	CCRYGG	1 cut(s)	2426
BstENI	CCTNNNNNAGG	1 cut(s)	1556
BstF5I	GGATG	8 cut(s)	104, 655, 933, 1318, 1828, 1834, 2062, 2305
BstFNI	CGCG	1 cut(s)	375
BstH2I	RGCGCY	1 cut(s)	2473
BstHHI	GCGC	2 cut(s)	375, 2472
BstKTI	GATC	9 cut(s)	49, 122, 178, 511, 606, 639, 853, 1100, 2399
BstMAI	GTCTC	7 cut(s)	557, 580, 586, 996, 1077, 1148, 2054
BstMBI	GATC	9 cut(s)	46, 119, 175, 508, 603, 636, 850, 1097, 2396
BstNI	CCWGG	3 cut(s)	28, 704, 1484
BstNSI	RCATGY	1 cut(s)	2373
BstSCI	CCNGG	5 cut(s)	26, 187, 702, 1482, 1673
BstSFI	CTRYAG	2 cut(s)	590, 1800
BstSLI	GKGCMC	3 cut(s)	35, 2422, 2545
BstSNI	TACGTA	1 cut(s)	1715
BstUI	CGCG	1 cut(s)	375
BstV1I	GCAGC	8 cut(s)	147, 229, 289, 1306, 1988, 2090, 2180, 2443
BstV2I	GAAGAC	2 cut(s)	1809, 2592
BstX2I	RGATCY	4 cut(s)	119, 603, 636, 2396
BstYI	RGATCY	4 cut(s)	119, 603, 636, 2396
BsuRI	GGCC	5 cut(s)	146, 1482, 1673, 1967, 2159
BtgI	CCRYGG	1 cut(s)	2426
BtgZI	GCGATG	1 cut(s)	716
BtsCI	GGATG	8 cut(s)	104, 655, 933, 1318, 1828, 1834, 2062, 2305
BtsI	GCAGTG	1 cut(s)	189
BtsIMutI	CAGTG	2 cut(s)	189, 321
BveI	ACCTGC	2 cut(s)	605, 911
Cac8I	GCNNGC	1 cut(s)	2303
CfoI	GCGC	2 cut(s)	375, 2472
Cfr10I	RCCGGY	1 cut(s)	2081
Cfr13I	GGNCC	5 cut(s)	432, 688, 1130, 1480, 1672
CseI	GACGC	4 cut(s)	7, 257, 351, 364
Csp6I	GTAC	7 cut(s)	7, 459, 659, 1164, 1259, 1797, 2373
CspCI	CAANNNNNGTGG	2 cut(s)	1864, 1899
CviQI	GTAC	7 cut(s)	7, 459, 659, 1164, 1259, 1797, 2373
DdeI	CTNAG	4 cut(s)	393, 995, 1079, 2042
DinI	GGCGCC	1 cut(s)	2471
DpnI	GATC	9 cut(s)	48, 121, 177, 510, 605, 638, 852, 1099, 2398
DpnII	GATC	9 cut(s)	46, 119, 175, 508, 603, 636, 850, 1097, 2396
DraIII	CACNNNGTG	1 cut(s)	184
EaeI	YGGCCR	2 cut(s)	1965, 2157
Eam1104I	CTCTTC	4 cut(s)	187, 1215, 1563, 2065
EarI	CTCTTC	4 cut(s)	187, 1215, 1563, 2065
EciI	GGCGGA	1 cut(s)	119
Eco105I	TACGTA	1 cut(s)	1715
Eco130I	CCWWGG	2 cut(s)	662, 2426
Eco32I	GATATC	1 cut(s)	682
Eco47I	GGWCC	3 cut(s)	432, 688, 1130
Eco57I	CTGAAG	5 cut(s)	46, 1587, 1803, 2001, 2283
Eco72I	CACGTG	1 cut(s)	2333
Eco88I	CYCGRG	1 cut(s)	2364
EcoNI	CCTNNNNNAGG	1 cut(s)	1556
EcoO109I	RGGNCCY	1 cut(s)	1480
EcoRI	GAATTC	1 cut(s)	2617
EcoRII	CCWGG	3 cut(s)	26, 702, 1482
EcoRV	GATATC	1 cut(s)	682
EcoT14I	CCWWGG	2 cut(s)	662, 2426
EcoT22I	ATGCAT	1 cut(s)	1384
EgeI	GGCGCC	1 cut(s)	2471
EheI	GGCGCC	1 cut(s)	2471
ErhI	CCWWGG	2 cut(s)	662, 2426
FalI	AAGNNNNNCTT	2 cut(s)	2614, 2646
FaqI	GGGAC	5 cut(s)	332, 445, 969, 2347, 2585
FauI	CCCGC	3 cut(s)	118, 1769, 2294
FauNDI	CATATG	1 cut(s)	960
FokI	GGATG	8 cut(s)	91, 662, 920, 1325, 1815, 1821, 2069, 2292
FspBI	CTAG	8 cut(s)	222, 479, 488, 663, 876, 1025, 1973, 2555
GlaI	GCGC	2 cut(s)	374, 2471
GsuI	CTGGAG	3 cut(s)	725, 1940, 2229
HaeII	RGCGCY	1 cut(s)	2473
HaeIII	GGCC	5 cut(s)	146, 1482, 1673, 1967, 2159
HapII	CCGG	7 cut(s)	117, 143, 188, 281, 1675, 2082, 2467
HgaI	GACGC	4 cut(s)	7, 257, 351, 364
HhaI	GCGC	2 cut(s)	375, 2472
Hin1I	GRCGYC	2 cut(s)	18, 2470
Hin6I	GCGC	2 cut(s)	373, 2470
HinP1I	GCGC	2 cut(s)	373, 2470
HindIII	AAGCTT	6 cut(s)	299, 1064, 1250, 1271, 1302, 1436
HpaII	CCGG	7 cut(s)	117, 143, 188, 281, 1675, 2082, 2467
HphI	GGTGA	4 cut(s)	49, 734, 860, 1541
Hpy166II	GTNNAC	2 cut(s)	1651, 2579
Hpy8I	GTNNAC	2 cut(s)	1651, 2579
Hpy99I	CGWCG	6 cut(s)	23, 76, 251, 367, 2167, 2610
HpyAV	CCTTC	9 cut(s)	864, 882, 1143, 1186, 1384, 1562, 1855, 2204, 2258
HpyCH4III	ACNGT	7 cut(s)	37, 266, 436, 673, 2065, 2259, 2576
HpyCH4IV	ACGT	4 cut(s)	1348, 1714, 1938, 2332
HpyF3I	CTNAG	4 cut(s)	393, 995, 1079, 2042
HpySE526I	ACGT	4 cut(s)	1348, 1714, 1938, 2332
Hsp92I	GRCGYC	2 cut(s)	18, 2470
HspAI	GCGC	2 cut(s)	373, 2470
KasI	GGCGCC	1 cut(s)	2469
Kzo9I	GATC	9 cut(s)	46, 119, 175, 508, 603, 636, 850, 1097, 2396
LmnI	GCTCC	9 cut(s)	96, 161, 283, 706, 1539, 1758, 2046, 2210, 2551
Lsp1109I	GCAGC	8 cut(s)	147, 229, 289, 1306, 1988, 2090, 2180, 2443
LweI	GCATC	8 cut(s)	942, 1369, 1837, 1921, 2025, 2164, 2173, 2314
MaeI	CTAG	8 cut(s)	222, 479, 488, 663, 876, 1025, 1973, 2555
MaeII	ACGT	4 cut(s)	1348, 1714, 1938, 2332
MaeIII	GTNAC	4 cut(s)	422, 1120, 1914, 2492
MalI	GATC	9 cut(s)	48, 121, 177, 510, 605, 638, 852, 1099, 2398
MbiI	CCGCTC	2 cut(s)	125, 2391
MboI	GATC	9 cut(s)	46, 119, 175, 508, 603, 636, 850, 1097, 2396
MfeI	CAATTG	3 cut(s)	313, 1730, 2088
MflI	RGATCY	4 cut(s)	119, 603, 636, 2396
MhlI	GDGCHC	3 cut(s)	35, 2422, 2545
MlsI	TGGCCA	2 cut(s)	1967, 2159
MluNI	TGGCCA	2 cut(s)	1967, 2159
Mly113I	GGCGCC	1 cut(s)	2470
MlyI	GAGTC	5 cut(s)	245, 1079, 1931, 2369, 2605
MmeI	TCCRAC	3 cut(s)	1828, 1873, 2588
Mox20I	TGGCCA	2 cut(s)	1967, 2159
Mph1103I	ATGCAT	1 cut(s)	1384
MscI	TGGCCA	2 cut(s)	1967, 2159
MseI	TTAA	8 cut(s)	288, 695, 713, 801, 1017, 1431, 1587, 2274
MslI	CAYNNNNRTG	2 cut(s)	2310, 2425
Msp20I	TGGCCA	2 cut(s)	1967, 2159
MspA1I	CMGCKG	2 cut(s)	1979, 2171
MspCI	CTTAAG	1 cut(s)	287
MspI	CCGG	7 cut(s)	117, 143, 188, 281, 1675, 2082, 2467
MspR9I	CCNGG	5 cut(s)	28, 189, 704, 1484, 1675
MunI	CAATTG	3 cut(s)	313, 1730, 2088
MvaI	CCWGG	3 cut(s)	28, 704, 1484
MvnI	CGCG	1 cut(s)	375
NarI	GGCGCC	1 cut(s)	2470
NciI	CCSGG	2 cut(s)	189, 1675
NcoI	CCATGG	1 cut(s)	2426
NdeI	CATATG	1 cut(s)	960
NdeII	GATC	9 cut(s)	46, 119, 175, 508, 603, 636, 850, 1097, 2396
NlaIV	GGNNCC	7 cut(s)	121, 157, 433, 605, 1866, 2471, 2542
NmeAIII	GCCGAG	1 cut(s)	1054
NmuCI	GTSAC	1 cut(s)	2492
NsiI	ATGCAT	1 cut(s)	1384
NspI	RCATGY	1 cut(s)	2373
NspV	TTCGAA	2 cut(s)	1555, 2068
PfeI	GAWTC	8 cut(s)	516, 569, 764, 784, 1058, 1805, 2095, 2145
PflMI	CCANNNNNTGG	1 cut(s)	646
PfoI	TCCNGGA	1 cut(s)	702
PleI	GAGTC	5 cut(s)	244, 1079, 1930, 2368, 2604
PluTI	GGCGCC	1 cut(s)	2473
PmaCI	CACGTG	1 cut(s)	2333
PmlI	CACGTG	1 cut(s)	2333
PpsI	GAGTC	5 cut(s)	244, 1079, 1930, 2368, 2604
Ppu21I	YACGTR	2 cut(s)	1715, 2333
PshBI	ATTAAT	1 cut(s)	1017
Psp6I	CCWGG	3 cut(s)	26, 702, 1482
PspCI	CACGTG	1 cut(s)	2333
PspGI	CCWGG	3 cut(s)	26, 702, 1482
PspN4I	GGNNCC	7 cut(s)	121, 157, 433, 605, 1866, 2471, 2542
PspPI	GGNCC	5 cut(s)	432, 688, 1130, 1480, 1672
PstI	CTGCAG	2 cut(s)	594, 1804
PsuI	RGATCY	4 cut(s)	119, 603, 636, 2396
PvuII	CAGCTG	2 cut(s)	1979, 2171
RsaI	GTAC	7 cut(s)	8, 460, 660, 1165, 1260, 1798, 2374
RsaNI	GTAC	7 cut(s)	7, 459, 659, 1164, 1259, 1797, 2373
RseI	CAYNNNNRTG	2 cut(s)	2310, 2425
SaqAI	TTAA	8 cut(s)	288, 695, 713, 801, 1017, 1431, 1587, 2274
Sau3AI	GATC	9 cut(s)	46, 119, 175, 508, 603, 636, 850, 1097, 2396
Sau96I	GGNCC	5 cut(s)	432, 688, 1130, 1480, 1672
ScaI	AGTACT	1 cut(s)	1798
SchI	GAGTC	5 cut(s)	245, 1079, 1931, 2369, 2605
ScrFI	CCNGG	5 cut(s)	28, 189, 704, 1484, 1675
SduI	GDGCHC	3 cut(s)	35, 2422, 2545
SfaNI	GCATC	8 cut(s)	942, 1369, 1837, 1921, 2025, 2164, 2173, 2314
SfcI	CTRYAG	2 cut(s)	590, 1800
SfoI	GGCGCC	1 cut(s)	2471
SfuI	TTCGAA	2 cut(s)	1555, 2068
SinI	GGWCC	3 cut(s)	432, 688, 1130
SmiMI	CAYNNNNRTG	2 cut(s)	2310, 2425
SmlI	CTYRAG	3 cut(s)	287, 1439, 2376
SmoI	CTYRAG	3 cut(s)	287, 1439, 2376
SnaBI	TACGTA	1 cut(s)	1715
SspDI	GGCGCC	1 cut(s)	2469
SspI	AATATT	1 cut(s)	621
SspMI	CTAG	8 cut(s)	222, 479, 488, 663, 876, 1025, 1973, 2555
StyD4I	CCNGG	5 cut(s)	26, 187, 702, 1482, 1673
StyI	CCWWGG	2 cut(s)	662, 2426
TaaI	ACNGT	7 cut(s)	37, 266, 436, 673, 2065, 2259, 2576
TaiI	ACGT	4 cut(s)	1351, 1717, 1941, 2335
TaqI	TCGA	5 cut(s)	836, 1147, 1244, 1555, 2068
TatI	WGTACW	3 cut(s)	1258, 1796, 2372
TauI	GCSGC	5 cut(s)	26, 116, 135, 743, 2232
TfiI	GAWTC	8 cut(s)	516, 569, 764, 784, 1058, 1805, 2095, 2145
Tru1I	TTAA	8 cut(s)	288, 695, 713, 801, 1017, 1431, 1587, 2274
Tru9I	TTAA	8 cut(s)	288, 695, 713, 801, 1017, 1431, 1587, 2274
TscAI	CASTG	2 cut(s)	189, 328
TseFI	GTSAC	1 cut(s)	2492
TseI	GCWGC	8 cut(s)	135, 242, 277, 1294, 1976, 2078, 2168, 2456
Tsp45I	GTSAC	1 cut(s)	2492
TspDTI	ATGAA	7 cut(s)	396, 1205, 1302, 1329, 1937, 2120, 2124
TspGWI	ACGGA	1 cut(s)	2624
TspRI	CASTG	2 cut(s)	189, 328
Van91I	CCANNNNNTGG	1 cut(s)	646
Vha464I	CTTAAG	1 cut(s)	287
VpaK11BI	GGWCC	3 cut(s)	432, 688, 1130
VspI	ATTAAT	1 cut(s)	1017
XagI	CCTNNNNNAGG	1 cut(s)	1556
XapI	RAATTY	6 cut(s)	1545, 1590, 1656, 1735, 2221, 2617
XbaI	TCTAGA	1 cut(s)	875
XceI	RCATGY	1 cut(s)	2373
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2330
XmaJI	CCTAGG	1 cut(s)	662
XspI	CTAG	8 cut(s)	222, 479, 488, 663, 876, 1025, 1973, 2555
ZrmI	AGTACT	1 cut(s)	1798
Zsp2I	ATGCAT	1 cut(s)	1384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.