Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0005615

Physical Location & Seq

Genomic Coordinates Forward (+)

25136039 .. 25144815

Gene Structure 8777 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00304510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2700 bp

ATGGCGTACCGAAACGGCGTCGCCGCCAGGGGCACGGTGAAGCTGGATCGCCCCGTCAGCTTCAGAACCTCGTCGTCTTTCAAGTCCAAGCTCCCTCCCTCTCCCTCTCCCACCGCCGGATCCGCTCTCCGCCGCAGCAGTCCGGCGTCGTTCGGCTCCGCTTCTAACAAAGACGATCACGCAGTGCCGGGAAGAGTTAGAGTAGCTGTAAGATTGCGACCTAGAAATGCGGAGGAGTCGGCTGCCGACGCAGATTTTGCTGACTGTGTGGAGTTGCAACCGGAGCTTAAGAGGTTGAAACTTCGGAAGAACAATTGGGACACCGACACCTACGAGTTTGATGATGTGCTTACTGAATATGCGTCGCAGAAGCGCGTCTATGAAGTTGTTGCTAAGCCTGTTGTGGAGAGTGTTTTAGATGGTTACAATGGGACCGTGATGGCTTATGGTCAGACGGGTACGGGGAAAACATTTACTCTAGGACGACTAGGAGACGAAGATACTTCTGATCGTGGAATCATGGTTCGTGCAATGGAGGACATTTTAGCTGATATATCTTTAGAGACTGATTCTGTCTCTGTCTCGTATCTGCAGCTTTATATGGAGACCCTCCAAGACCTGCTGGATCCAGCAAATGATAATATTCCCATCGTTGAAGATCCAAAAACTGGAGATGTTTCAGTACCTAGGGCAACTGTTGTAGATATCAAGGACCAGTTAAGTTTCCTGGAGCTGTTAAGAGTTGGTGAAGCTCATCGCATTGCCGCTAATACAAAGTTGAATACTGAATCTTCTCGCAGTCATGCGATTCTGATGGTAAATGTTAAGAGGTGTGTTATGGGAAGTGAAGATAATGTTTCGAGTGAAAATGGTGATCCTTCTCACTTGACCAAGCCTTCTAGACCACTTGTTCGGAAAAGCAAACTTGTTGTTGTAGATTTGGCAGGTTCGGAACGCATCCAGAAATCAGGAAGTGAGGGACATATGTTAGAGGAAGCCAAGTGTATCAATCTGTCTCTTAGTGCATTAGGGAAGTGTATTAATTCTCTAGCCGAGAATAGTAGTCATGTTCCATTTCGTGATTCAAAGCTTACAAGATTGCTTAGAGATTCATTTGGAGGATCAGCGAGGACTTCACTAATTGTTACCATTGGTCCTTCTCCACGCCATCGAGGAGAGACTTCAAGTACCATACTATTTGGGCAAAGGGCTATGAAGGTGGAAAATATGTTGAAAATAAAGGAAGAGTTTGATTACAAAAGTTTGTCGAGAAAGCTTGAAGTACAACTGGATAAGCTTATTGCAGAAAATGAAAGGCAGCATAAAGCTTATGAGGATGAAGTTGAAAGACTAAATGTAGAAGCAGAAAAACGTATTTCAGAGGTTGAGAGAAACTTTGCTGATGCATTAGAGAAGGAGAGGCGAAAATGCCAGATGGATTATATGGAAGCTGTTAAGAAGCTTGAGGAGAAGTTGGTGTCAAATCAGAAGCAAGACCACGAGGGCCTGGTCAATGGTAAATGCAATGGAGAGGAAGTGAGTGAGGTGCAAGAGTTGCTCCAAAAAGAAATTCACCTTCGAAAGGTGGCTGAAGAGGAGGTGGAAAATCTTAAAAGTCAACTGGGGCTATTTACACAATCAGAAGTAGGTGGAAATGCAGAGATGGTAAGGGTTCACAAAATTTTAGAGGAGGAGGCCCGGCATAAGAAGAAACTTGAAGAAGAAATCATTATATTGCGTAGTCAGTTATTGCAATTGAATTTTGAAGCTGAACAGATGAGGAGCTGTCTTGATAGAGGCGGGCCTGGAAATGGGTATAGTACTGCAGATTCTTCCATGTCTTCAGTCAGGCATTCTCATCCCAGAGATGTTGGAAATGGACAGAAGGCACCAGTTTCCACACTCTTTGAACAAGGTGTTGGATTGCAAAAGATTTTGTCGTTACTGGAGTCAGAAGATGCTAATGTGCGTATTCATGCCGTAAAAGTAGTGGCCAACCTAGCAGCTGAAGAAACAAACCAGAAAAGGATTGTTGAAGCTGGTGGTCTTACTTCGTTGTTGATGCTTCTTAGGAGCTTTGAGGATGAGACTGTTCGAAGAGTGGCAGCCGGTGCAATTGCGAATCTTGCAATGAATGCAGAAGCCAATCAAGAGCATATAATGGTTCAAGGTGGAATCAGTTTGTTGGCCACGACGGCAGCTGATGCTGATGATGCCCAAACCCTTCGCATGGTTGCTGGAGCTATTGCAAATTTATGCGGCAATGATAAGCTACAAACAAACCTACGGTCTGAAGGTGCTATTAAGGCTTTATTAGGAATTGTAAGGTGCGGGCATCCTGACGTCCTTTCCCAAGTCGCACGTGGAATTGCTAACTTTGCAAAATGCGAGTCCCGAGCATGTACTCAAGGGATAAAGAGCGGAAGATCCATATTGATAGAAGATGGGGCACTTCCATGGATTGTGCAAAATGCCAATGACGAGGCTGCACCTATCCGGCGCCACATTGAGCTTGCACTCTGTCACTTGGCACAGCATGAGGTAAATGCAAAAGACATGATTAGTGGAGGTGCCCTATGGGAGCTAGTTCGTATTTCACGGGACTGTTCACGAGAAGACATAAGGAGTCTTGCTCGTCGGATTTTGAATTCAAGCCCCACTTTCCGTGCTGAACTACGGCGATTACGGATAGACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04144 ko04728 map04144 map04728

Pfam Domains

Protein Families

Arm Kinesin

Protein Analysis

899

Amino Acids

99.24

Weight (kDa)

6.14

Isoelectric Point (pI)

48.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	64 - 208	2e-16	Microtubule binding
Kinesin	PF00225	71 - 407	4.1e-96	Kinesin motor domain
ARM_ARMC5	PF24768	663 - 867	1.6e-13	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005615)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01950 AT1G01950 AT1G01950 AT1G01950
fragaria_vesca	FvH4_2g41300 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050 FvH4_7g12050
malus_domestica	MD02G1201700.v1.1
prunus_persica	Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1 Prupe.2G147100_v2.0.a1
pyrus_communis	pycom02g16510
rosa_chinensis	RchiOBHm_Chr1g0350761
rosa_laevigata	RLG00000028455
rosa_multiflora	Rmu_sc0006200.1_g000002 Rmu_sc0008591.1_g000001
rosa_roxburghii	Rroxscaffold_4G00304510
rosa_rugosa	Rorug01G0214000
rosa_samantha	Rh1AG228400 Rh1BG197800 Rh1CG213200 Rh1DG225700
rosa_wichuraiana	Rw1G019780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2346
Acc36I	ACCTGC	2 cut(s)	627, 935
AccB1I	GGYRCC	3 cut(s)	1888, 2499, 2570
AccB7I	CCANNNNNTGG	1 cut(s)	668
AccBSI	CCGCTC	2 cut(s)	125, 2421
AccII	CGCG	1 cut(s)	375
AclWI	GGATC	9 cut(s)	54, 114, 127, 620, 633, 653, 869, 1129, 2421
AcoI	YGGCCR	2 cut(s)	1992, 2187
AcsI	RAATTY	5 cut(s)	1569, 1680, 1759, 2251, 2647
AcuI	CTGAAG	5 cut(s)	46, 1611, 1827, 2028, 2313
AcvI	CACGTG	1 cut(s)	2363
AcyI	GRCGYC	4 cut(s)	18, 146, 2343, 2500
AdeI	CACNNNGTG	1 cut(s)	184
AfaI	GTAC	7 cut(s)	8, 460, 684, 1189, 1284, 1822, 2404
AfiI	CCNNNNNNNGG	5 cut(s)	116, 668, 1582, 1811, 2230
AflII	CTTAAG	1 cut(s)	287
AjnI	CCWGG	4 cut(s)	26, 726, 1506, 1804
AjuI	GAANNNNNNNTTGG	4 cut(s)	1554, 1586, 1902, 1934
AloI	GAACNNNNNNTCC	2 cut(s)	507, 539
Alw26I	GTCTC	8 cut(s)	486, 557, 580, 586, 599, 1020, 1172, 2081
AlwI	GGATC	9 cut(s)	54, 114, 127, 620, 633, 653, 869, 1129, 2421
Ama87I	CYCGRG	1 cut(s)	2394
AoxI	GGCC	5 cut(s)	1504, 1695, 1802, 1992, 2187
ApeKI	GCWGC	8 cut(s)	135, 242, 592, 1318, 2003, 2105, 2198, 2486
ApoI	RAATTY	5 cut(s)	1569, 1680, 1759, 2251, 2647
ArsI	GACNNNNNNTTYG	8 cut(s)	239, 271, 894, 926, 2273, 2305, 2375, 2407
AseI	ATTAAT	1 cut(s)	1041
AspA2I	CCTAGG	1 cut(s)	686
AspLEI	GCGC	2 cut(s)	375, 2502
AspS9I	GGNCC	6 cut(s)	432, 712, 1154, 1504, 1696, 1802
AsuC2I	CCSGG	2 cut(s)	189, 1699
AsuHPI	GGTGA	4 cut(s)	49, 758, 884, 1565
AsuII	TTCGAA	2 cut(s)	1579, 2095
AvaI	CYCGRG	1 cut(s)	2394
AvaII	GGWCC	3 cut(s)	432, 712, 1154
AvrII	CCTAGG	1 cut(s)	686
BaeGI	GKGCMC	3 cut(s)	35, 2452, 2575
BalI	TGGCCA	2 cut(s)	1994, 2189
BamHI	GGATCC	2 cut(s)	119, 625
BanI	GGYRCC	3 cut(s)	1888, 2499, 2570
BauI	CACGAG	2 cut(s)	1499, 2610
BbrPI	CACGTG	1 cut(s)	2363
BbsI	GAAGAC	2 cut(s)	1833, 2622
BbvI	GCAGC	8 cut(s)	147, 229, 604, 1330, 2015, 2117, 2210, 2473
BccI	CCATC	8 cut(s)	413, 433, 656, 808, 1176, 1429, 1657, 2438
BceAI	ACGGC	4 cut(s)	31, 1964, 2211, 2693
BciT130I	CCWGG	4 cut(s)	28, 728, 1508, 1806
BcnI	CCSGG	2 cut(s)	189, 1699
BcoDI	GTCTC	8 cut(s)	486, 557, 580, 586, 599, 1020, 1172, 2081
BfaI	CTAG	8 cut(s)	222, 479, 488, 687, 900, 1049, 2000, 2585
BfmI	CTRYAG	2 cut(s)	590, 1824
BfoI	RGCGCY	1 cut(s)	2503
BfrI	CTTAAG	1 cut(s)	287
BfuAI	ACCTGC	2 cut(s)	627, 935
BglI	GCCNNNNNGGC	1 cut(s)	2195
BlnI	CCTAGG	1 cut(s)	686
BlpI	GCTNAGC	1 cut(s)	393
BmcAI	AGTACT	1 cut(s)	1822
Bme1390I	CCNGG	6 cut(s)	28, 189, 728, 1508, 1699, 1806
Bme18I	GGWCC	3 cut(s)	432, 712, 1154
BmeT110I	CYCGRG	1 cut(s)	2394
BmgT120I	GGNCC	6 cut(s)	432, 712, 1154, 1504, 1696, 1802
BmiI	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2501, 2572
BmrFI	CCNGG	6 cut(s)	28, 189, 728, 1508, 1699, 1806
BmrI	ACTGGG	1 cut(s)	1631
BmsI	GCATC	7 cut(s)	966, 1393, 1948, 2052, 2194, 2203, 2344
BmuI	ACTGGG	1 cut(s)	1631
BpiI	GAAGAC	2 cut(s)	1833, 2622
BplI	GAGNNNNNCTC	2 cut(s)	2617, 2649
BpmI	CTGGAG	4 cut(s)	690, 749, 1967, 2259
Bpu1102I	GCTNAGC	1 cut(s)	393
Bpu14I	TTCGAA	2 cut(s)	1579, 2095
BpuEI	CTTGAG	2 cut(s)	1484, 2391
BpuMI	CCSGG	2 cut(s)	189, 1699
BsaAI	YACGTR	1 cut(s)	2363
BsaHI	GRCGYC	4 cut(s)	18, 146, 2343, 2500
BsaI	GGTCTC	1 cut(s)	599
BsaJI	CCNNGG	3 cut(s)	27, 686, 2456
BsaWI	WCCGGW	1 cut(s)	280
BsaXI	ACNNNNNCTCC	2 cut(s)	1521, 1551
Bsc4I	CCNNNNNNNGG	5 cut(s)	116, 668, 1582, 1811, 2230
Bse118I	RCCGGY	1 cut(s)	2108
Bse1I	ACTGG	6 cut(s)	673, 715, 1293, 1626, 1892, 1950
Bse3DI	GCAATG	5 cut(s)	537, 759, 1531, 2136, 2269
BseBI	CCWGG	4 cut(s)	28, 728, 1508, 1806
BseDI	CCNNGG	3 cut(s)	27, 686, 2456
BseGI	GGATG	5 cut(s)	957, 1342, 1858, 2089, 2335
BseLI	CCNNNNNNNGG	5 cut(s)	116, 668, 1582, 1811, 2230
BseMI	GCAATG	5 cut(s)	537, 759, 1531, 2136, 2269
BseNI	ACTGG	6 cut(s)	673, 715, 1293, 1626, 1892, 1950
BseRI	GAGGAG	7 cut(s)	248, 1188, 1481, 1610, 1703, 1706, 1795
BseSI	GKGCMC	3 cut(s)	35, 2452, 2575
BseXI	GCAGC	8 cut(s)	147, 229, 604, 1330, 2015, 2117, 2210, 2473
BsgI	GTGCAG	1 cut(s)	2472
Bsh1236I	CGCG	1 cut(s)	375
BshFI	GGCC	5 cut(s)	1506, 1697, 1804, 1994, 2189
BshNI	GGYRCC	3 cut(s)	1888, 2499, 2570
BsiHKCI	CYCGRG	1 cut(s)	2394
BsiSI	CCGG	7 cut(s)	117, 143, 188, 281, 1699, 2109, 2497
BslFI	GGGAC	5 cut(s)	332, 445, 993, 2377, 2615
BslI	CCNNNNNNNGG	5 cut(s)	116, 668, 1582, 1811, 2230
BsmAI	GTCTC	8 cut(s)	486, 557, 580, 586, 599, 1020, 1172, 2081
BsmBI	CGTCTC	1 cut(s)	486
BsmFI	GGGAC	5 cut(s)	332, 445, 993, 2377, 2615
BsmI	GAATGC	2 cut(s)	1852, 2140
BsnI	GGCC	5 cut(s)	1506, 1697, 1804, 1994, 2189
Bso31I	GGTCTC	1 cut(s)	599
BsoBI	CYCGRG	1 cut(s)	2394
Bsp119I	TTCGAA	2 cut(s)	1579, 2095
Bsp1286I	GDGCHC	3 cut(s)	35, 2452, 2575
Bsp143I	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2426
Bsp1720I	GCTNAGC	1 cut(s)	393
Bsp19I	CCATGG	1 cut(s)	2456
BspANI	GGCC	5 cut(s)	1506, 1697, 1804, 1994, 2189
BspFNI	CGCG	1 cut(s)	375
BspLI	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2501, 2572
BspMAI	CTGCAG	2 cut(s)	594, 1828
BspMI	ACCTGC	2 cut(s)	627, 935
BspPI	GGATC	9 cut(s)	54, 114, 127, 620, 633, 653, 869, 1129, 2421
BspT104I	TTCGAA	2 cut(s)	1579, 2095
BspT107I	GGYRCC	3 cut(s)	1888, 2499, 2570
BspTI	CTTAAG	1 cut(s)	287
BspTNI	GGTCTC	1 cut(s)	599
BsrBI	CCGCTC	2 cut(s)	125, 2421
BsrDI	GCAATG	5 cut(s)	537, 759, 1531, 2136, 2269
BsrFI	RCCGGY	1 cut(s)	2108
BsrI	ACTGG	6 cut(s)	673, 715, 1293, 1626, 1892, 1950
BssAI	RCCGGY	1 cut(s)	2108
BssECI	CCNNGG	3 cut(s)	27, 686, 2456
BssMI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2426
BssNI	GRCGYC	4 cut(s)	18, 146, 2343, 2500
BssSI	CACGAG	2 cut(s)	1499, 2610
BssT1I	CCWWGG	2 cut(s)	686, 2456
Bst2BI	CACGAG	2 cut(s)	1499, 2610
Bst2UI	CCWGG	4 cut(s)	28, 728, 1508, 1806
Bst4CI	ACNGT	7 cut(s)	37, 266, 436, 697, 2092, 2289, 2606
Bst6I	CTCTTC	4 cut(s)	187, 1239, 1587, 2092
BstACI	GRCGYC	4 cut(s)	18, 146, 2343, 2500
BstAFI	CTTAAG	1 cut(s)	287
BstAPI	GCANNNNNTGC	5 cut(s)	257, 1555, 2111, 2135, 2204
BstBAI	YACGTR	1 cut(s)	2363
BstBI	TTCGAA	2 cut(s)	1579, 2095
BstC8I	GCNNGC	3 cut(s)	1802, 2333, 2514
BstDEI	CTNAG	4 cut(s)	393, 1019, 1103, 2069
BstDSI	CCRYGG	1 cut(s)	2456
BstENI	CCTNNNNNAGG	1 cut(s)	1580
BstF5I	GGATG	5 cut(s)	957, 1342, 1858, 2089, 2335
BstFNI	CGCG	1 cut(s)	375
BstH2I	RGCGCY	1 cut(s)	2503
BstHHI	GCGC	2 cut(s)	375, 2502
BstKTI	GATC	9 cut(s)	49, 122, 178, 511, 628, 661, 877, 1124, 2429
BstMAI	GTCTC	8 cut(s)	486, 557, 580, 586, 599, 1020, 1172, 2081
BstMBI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2426
BstNI	CCWGG	4 cut(s)	28, 728, 1508, 1806
BstNSI	RCATGY	1 cut(s)	2403
BstSCI	CCNGG	6 cut(s)	26, 187, 726, 1506, 1697, 1804
BstSFI	CTRYAG	2 cut(s)	590, 1824
BstSLI	GKGCMC	3 cut(s)	35, 2452, 2575
BstUI	CGCG	1 cut(s)	375
BstV1I	GCAGC	8 cut(s)	147, 229, 604, 1330, 2015, 2117, 2210, 2473
BstV2I	GAAGAC	2 cut(s)	1833, 2622
BstX2I	RGATCY	4 cut(s)	119, 625, 658, 2426
BstYI	RGATCY	4 cut(s)	119, 625, 658, 2426
BsuRI	GGCC	5 cut(s)	1506, 1697, 1804, 1994, 2189
BtgI	CCRYGG	1 cut(s)	2456
BtgZI	GCGATG	1 cut(s)	740
BtsCI	GGATG	5 cut(s)	957, 1342, 1858, 2089, 2335
BtsI	GCAGTG	1 cut(s)	189
BtsIMutI	CAGTG	1 cut(s)	189
BveI	ACCTGC	2 cut(s)	627, 935
Cac8I	GCNNGC	3 cut(s)	1802, 2333, 2514
CfoI	GCGC	2 cut(s)	375, 2502
Cfr10I	RCCGGY	1 cut(s)	2108
Cfr13I	GGNCC	6 cut(s)	432, 712, 1154, 1504, 1696, 1802
CseI	GACGC	5 cut(s)	7, 135, 257, 351, 364
Csp6I	GTAC	7 cut(s)	7, 459, 683, 1188, 1283, 1821, 2403
CspCI	CAANNNNNGTGG	2 cut(s)	1888, 1923
CviQI	GTAC	7 cut(s)	7, 459, 683, 1188, 1283, 1821, 2403
DdeI	CTNAG	4 cut(s)	393, 1019, 1103, 2069
DinI	GGCGCC	1 cut(s)	2501
DpnI	GATC	9 cut(s)	48, 121, 177, 510, 627, 660, 876, 1123, 2428
DpnII	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2426
DraIII	CACNNNGTG	1 cut(s)	184
EaeI	YGGCCR	2 cut(s)	1992, 2187
Eam1104I	CTCTTC	4 cut(s)	187, 1239, 1587, 2092
EarI	CTCTTC	4 cut(s)	187, 1239, 1587, 2092
EciI	GGCGGA	1 cut(s)	119
Eco130I	CCWWGG	2 cut(s)	686, 2456
Eco31I	GGTCTC	1 cut(s)	599
Eco32I	GATATC	1 cut(s)	706
Eco47I	GGWCC	3 cut(s)	432, 712, 1154
Eco57I	CTGAAG	5 cut(s)	46, 1611, 1827, 2028, 2313
Eco72I	CACGTG	1 cut(s)	2363
Eco88I	CYCGRG	1 cut(s)	2394
EcoNI	CCTNNNNNAGG	1 cut(s)	1580
EcoO109I	RGGNCCY	1 cut(s)	1504
EcoRI	GAATTC	1 cut(s)	2647
EcoRII	CCWGG	4 cut(s)	26, 726, 1506, 1804
EcoRV	GATATC	1 cut(s)	706
EcoT14I	CCWWGG	2 cut(s)	686, 2456
EcoT22I	ATGCAT	1 cut(s)	1408
EgeI	GGCGCC	1 cut(s)	2501
EheI	GGCGCC	1 cut(s)	2501
ErhI	CCWWGG	2 cut(s)	686, 2456
Esp3I	CGTCTC	1 cut(s)	486
FalI	AAGNNNNNCTT	2 cut(s)	2644, 2676
FaqI	GGGAC	5 cut(s)	332, 445, 993, 2377, 2615
FauI	CCCGC	2 cut(s)	1793, 2324
FauNDI	CATATG	1 cut(s)	984
FokI	GGATG	5 cut(s)	944, 1349, 1845, 2096, 2322
FspBI	CTAG	8 cut(s)	222, 479, 488, 687, 900, 1049, 2000, 2585
GlaI	GCGC	2 cut(s)	374, 2501
GsuI	CTGGAG	4 cut(s)	690, 749, 1967, 2259
HaeII	RGCGCY	1 cut(s)	2503
HaeIII	GGCC	5 cut(s)	1506, 1697, 1804, 1994, 2189
HapII	CCGG	7 cut(s)	117, 143, 188, 281, 1699, 2109, 2497
HgaI	GACGC	5 cut(s)	7, 135, 257, 351, 364
HhaI	GCGC	2 cut(s)	375, 2502
Hin1I	GRCGYC	4 cut(s)	18, 146, 2343, 2500
Hin6I	GCGC	2 cut(s)	373, 2500
HinP1I	GCGC	2 cut(s)	373, 2500
HincII	GTYRAC	1 cut(s)	1619
HindII	GTYRAC	1 cut(s)	1619
HindIII	AAGCTT	5 cut(s)	1088, 1274, 1295, 1326, 1460
HpaII	CCGG	7 cut(s)	117, 143, 188, 281, 1699, 2109, 2497
HphI	GGTGA	4 cut(s)	49, 758, 884, 1565
Hpy166II	GTNNAC	3 cut(s)	1619, 1675, 2609
Hpy8I	GTNNAC	3 cut(s)	1619, 1675, 2609
Hpy99I	CGWCG	7 cut(s)	23, 76, 151, 251, 367, 2197, 2640
HpyAV	CCTTC	9 cut(s)	888, 906, 1167, 1210, 1408, 1586, 1879, 2234, 2288
HpyCH4III	ACNGT	7 cut(s)	37, 266, 436, 697, 2092, 2289, 2606
HpyCH4IV	ACGT	3 cut(s)	1372, 2343, 2362
HpyF3I	CTNAG	4 cut(s)	393, 1019, 1103, 2069
HpySE526I	ACGT	3 cut(s)	1372, 2343, 2362
Hsp92I	GRCGYC	4 cut(s)	18, 146, 2343, 2500
HspAI	GCGC	2 cut(s)	373, 2500
KasI	GGCGCC	1 cut(s)	2499
Kzo9I	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2426
LmnI	GCTCC	9 cut(s)	96, 161, 283, 730, 1563, 1782, 2073, 2240, 2581
Lsp1109I	GCAGC	8 cut(s)	147, 229, 604, 1330, 2015, 2117, 2210, 2473
LweI	GCATC	7 cut(s)	966, 1393, 1948, 2052, 2194, 2203, 2344
MaeI	CTAG	8 cut(s)	222, 479, 488, 687, 900, 1049, 2000, 2585
MaeII	ACGT	3 cut(s)	1372, 2343, 2362
MaeIII	GTNAC	4 cut(s)	422, 1144, 1941, 2522
MalI	GATC	9 cut(s)	48, 121, 177, 510, 627, 660, 876, 1123, 2428
MbiI	CCGCTC	2 cut(s)	125, 2421
MboI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2426
MfeI	CAATTG	3 cut(s)	313, 1754, 2115
MflI	RGATCY	4 cut(s)	119, 625, 658, 2426
MhlI	GDGCHC	3 cut(s)	35, 2452, 2575
MlsI	TGGCCA	2 cut(s)	1994, 2189
MluNI	TGGCCA	2 cut(s)	1994, 2189
Mly113I	GGCGCC	1 cut(s)	2500
MlyI	GAGTC	4 cut(s)	245, 1958, 2399, 2635
MmeI	TCCRAC	3 cut(s)	1852, 1900, 2618
Mox20I	TGGCCA	2 cut(s)	1994, 2189
Mph1103I	ATGCAT	1 cut(s)	1408
MscI	TGGCCA	2 cut(s)	1994, 2189
MseI	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2304
MslI	CAYNNNNRTG	1 cut(s)	2455
Msp20I	TGGCCA	2 cut(s)	1994, 2189
MspA1I	CMGCKG	2 cut(s)	2006, 2201
MspCI	CTTAAG	1 cut(s)	287
MspI	CCGG	7 cut(s)	117, 143, 188, 281, 1699, 2109, 2497
MspR9I	CCNGG	6 cut(s)	28, 189, 728, 1508, 1699, 1806
MunI	CAATTG	3 cut(s)	313, 1754, 2115
Mva1269I	GAATGC	2 cut(s)	1852, 2140
MvaI	CCWGG	4 cut(s)	28, 728, 1508, 1806
MvnI	CGCG	1 cut(s)	375
NarI	GGCGCC	1 cut(s)	2500
NciI	CCSGG	2 cut(s)	189, 1699
NcoI	CCATGG	1 cut(s)	2456
NdeI	CATATG	1 cut(s)	984
NdeII	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2426
NlaIV	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2501, 2572
NmeAIII	GCCGAG	1 cut(s)	1078
NmuCI	GTSAC	1 cut(s)	2522
NsiI	ATGCAT	1 cut(s)	1408
NspI	RCATGY	1 cut(s)	2403
NspV	TTCGAA	2 cut(s)	1579, 2095
PctI	GAATGC	2 cut(s)	1852, 2140
PfeI	GAWTC	9 cut(s)	516, 569, 788, 808, 1082, 1109, 1829, 2122, 2175
PflMI	CCANNNNNTGG	1 cut(s)	668
PfoI	TCCNGGA	1 cut(s)	726
PleI	GAGTC	4 cut(s)	244, 1957, 2398, 2634
PluTI	GGCGCC	1 cut(s)	2503
PmaCI	CACGTG	1 cut(s)	2363
PmlI	CACGTG	1 cut(s)	2363
PpsI	GAGTC	4 cut(s)	244, 1957, 2398, 2634
Ppu21I	YACGTR	1 cut(s)	2363
PshBI	ATTAAT	1 cut(s)	1041
Psp6I	CCWGG	4 cut(s)	26, 726, 1506, 1804
PspCI	CACGTG	1 cut(s)	2363
PspGI	CCWGG	4 cut(s)	26, 726, 1506, 1804
PspN4I	GGNNCC	7 cut(s)	121, 157, 433, 627, 1890, 2501, 2572
PspPI	GGNCC	6 cut(s)	432, 712, 1154, 1504, 1696, 1802
PstI	CTGCAG	2 cut(s)	594, 1828
PsuI	RGATCY	4 cut(s)	119, 625, 658, 2426
PvuII	CAGCTG	2 cut(s)	2006, 2201
RsaI	GTAC	7 cut(s)	8, 460, 684, 1189, 1284, 1822, 2404
RsaNI	GTAC	7 cut(s)	7, 459, 683, 1188, 1283, 1821, 2403
RseI	CAYNNNNRTG	1 cut(s)	2455
SaqAI	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2304
Sau3AI	GATC	9 cut(s)	46, 119, 175, 508, 625, 658, 874, 1121, 2426
Sau96I	GGNCC	6 cut(s)	432, 712, 1154, 1504, 1696, 1802
ScaI	AGTACT	1 cut(s)	1822
SchI	GAGTC	4 cut(s)	245, 1958, 2399, 2635
ScrFI	CCNGG	6 cut(s)	28, 189, 728, 1508, 1699, 1806
SduI	GDGCHC	3 cut(s)	35, 2452, 2575
SfaNI	GCATC	7 cut(s)	966, 1393, 1948, 2052, 2194, 2203, 2344
SfcI	CTRYAG	2 cut(s)	590, 1824
SfoI	GGCGCC	1 cut(s)	2501
SfuI	TTCGAA	2 cut(s)	1579, 2095
SinI	GGWCC	3 cut(s)	432, 712, 1154
SmiMI	CAYNNNNRTG	1 cut(s)	2455
SmlI	CTYRAG	3 cut(s)	287, 1463, 2406
SmoI	CTYRAG	3 cut(s)	287, 1463, 2406
SspDI	GGCGCC	1 cut(s)	2499
SspI	AATATT	1 cut(s)	643
SspMI	CTAG	8 cut(s)	222, 479, 488, 687, 900, 1049, 2000, 2585
StyD4I	CCNGG	6 cut(s)	26, 187, 726, 1506, 1697, 1804
StyI	CCWWGG	2 cut(s)	686, 2456
TaaI	ACNGT	7 cut(s)	37, 266, 436, 697, 2092, 2289, 2606
TaiI	ACGT	3 cut(s)	1375, 2346, 2365
TaqI	TCGA	5 cut(s)	860, 1171, 1268, 1579, 2095
TatI	WGTACW	3 cut(s)	1282, 1820, 2402
TauI	GCSGC	4 cut(s)	26, 135, 767, 2262
TfiI	GAWTC	9 cut(s)	516, 569, 788, 808, 1082, 1109, 1829, 2122, 2175
Tru1I	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2304
Tru9I	TTAA	8 cut(s)	288, 719, 737, 825, 1041, 1455, 1611, 2304
TscAI	CASTG	1 cut(s)	189
TseFI	GTSAC	1 cut(s)	2522
TseI	GCWGC	8 cut(s)	135, 242, 592, 1318, 2003, 2105, 2198, 2486
Tsp45I	GTSAC	1 cut(s)	2522
TspDTI	ATGAA	7 cut(s)	396, 1101, 1229, 1326, 1353, 1964, 2147
TspGWI	ACGGA	1 cut(s)	2654
TspRI	CASTG	1 cut(s)	189
Van91I	CCANNNNNTGG	1 cut(s)	668
Vha464I	CTTAAG	1 cut(s)	287
VpaK11BI	GGWCC	3 cut(s)	432, 712, 1154
VspI	ATTAAT	1 cut(s)	1041
XagI	CCTNNNNNAGG	1 cut(s)	1580
XapI	RAATTY	5 cut(s)	1569, 1680, 1759, 2251, 2647
XbaI	TCTAGA	1 cut(s)	899
XceI	RCATGY	1 cut(s)	2403
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2360
XmaJI	CCTAGG	1 cut(s)	686
XspI	CTAG	8 cut(s)	222, 479, 488, 687, 900, 1049, 2000, 2585
ZraI	GACGTC	1 cut(s)	2344
ZrmI	AGTACT	1 cut(s)	1822
Zsp2I	ATGCAT	1 cut(s)	1408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.