RchiOBHm_Chr1g0363051

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0012886
Physical Location & Seq
Forward (+)
54577996 .. 54582137
4142 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2160 bp
ATGGGAAGCAAATGGAGGAAGGCAAGGATGGCACTGGGTCTGAATCTCTGTGTGTATCTGCCCAAAACACTAGAAGACTCATCTCCTTCCTCGCTGGACTCAGAAGAGAGATTGTCTGATGCTGCTCTGCTTTCACCAGCCAATTTGGGCTCATCCAGGCCCCCCACACCATCACCGTCCTCTTATGGCCTGAAGCTCTCTAGAAGTGGGAGCAAATCTTCTTCCAAGCAGACTTGCTCGATATGCTTGACCAAAATGAAACAAGGAGGTGGCCAGGCTTTATTCACTGCAGAATGTTCACATTCTTTTCATTTCCACTGCATTGCATCAAATGTAAAACATGGCAACCAAATCTGCCCAGTTTGTAGGGCAAAATGGAAGGAAATCCCTGTGCAAGGTCCCACTGCGGACCCTTCCCCTGGAAGGGCACCTATTGGTCCAGTAGGTTGGCCTCAAAATGATGCTTTGATGACAGTTGTTCGCCGGCTACCTCCTCCTCGAAGAGACTTGAGCCAAAGGCACATTGTGCCACTGTTTCCTGCTGCTGAGCCAGGCATATTCAATGATGATGAATCCTTGGATCACCAAACTGTGGCTGCTGAGAGAAGCTCTTCCAATAAAAATTCTGCAGATGAAAATTTTTTTAGAACAATAGAAATAAAAACATACCCTGAGGTTTCAGCTGTTACAAAATCCGAATCTTTTGACAACTTTACGGTTTTGGTCAATCTGAAAGCGGCTGCTTCTACTACAACACAAAATCCTAGCAGAAATCAATCCAGCTTGCCACAATTTTCTCAGAATCGTCGTGCTCCAGTAGACCTGGTCACAGTGCTTGACATCAGTGGTAGCATGGCAGGAACTAAGCTTGCATTGCTGAAACGGGCCATGGGTTTTGTAATACAGAATCTTGGCTCCAATGACAGGCTGTCAGTTATTGCCTTCTCTTCGACAGCTCGTCGCCTCTTTCCACTCCGCCGAATGACCGACACTGGACGCCAGCAGGCTCTGCAAGCTGTCAACTCTTTGGTTGCAAATGGGGGGACCAACATTGCCGAAGGCTTAAGAAAGGGTGGCAAGATATTGGAAGATCGGAGGGGAAAGAATCCTGTTGCCAGCATAATACTGTTGTCTGATGGTCAGGACACTTATACTGTCAGTGGGTCTGCGGCAAACCAAGCTCAACCAAATTATCAGTTGCTCCTCCCTTTGTCTATTCACAGTGGTGACAACACAGGCTTCCAGATTCCAGTGCATGCATTTGGGTTTGGTGCAGATCACGATGCATCATCGATGCATTCAATTTCAGAGATATCTGGAGGGACCTTTTCTTTCATTGAGACTGAAGCCGTTATCCAGGATGCATTTGCACAGTGCATTGGGGGTCTTTTGAGCGTTGTGGTACAAGAGTTGCAGGTGGAAGTGGAGTGTGTGAATACGAATGTCTGCCTTGGTTCACTAAAGGCAGGAAGTTACCCAAGTCGTGTAATGGTTGGTGGACGTAAAGGGTCTATTGATGTTGGAGATCTATATGCTGAGGAAGAGAGGGATTTTCTAGTTTCTGTTAATGTCCCAGCAGAGTTTTCTAGCAATCTAACATCATTGATCAAGGTGAGATGCATTTACAAGGATCCCTTAGCTAAAGAAATGGCAACATTAGAGAGTGAAGAAGTTGGAATTGAGAGACCTGCAGTGGCTGGACAAGTAGTAGTCTCAATAGAAGTGGACAGGCAACGTAATAGGCTCCACGCTGCTGAGGCAATGGCACAGGCACGAGCTGCCGCTGAGCGGGGAGACTTAGCTGGTGCAGCTTTAATCCTTGAAGATTGTCGAAGGGTATTGTCAGAGACCGTGTCAGCAAAATCTAATGACCGCCTGTGCGTAGCATTGGATGCCGAGCTCAAGGAAATGCAAGAGAGGATGGCAAGTAGGCATGTATACGAGGCATCTGGTAGGGCATACATTCTTTCAGGACTGAGCTCACACTCATGGCAAAGAGCAACAGCAAGAGGTGACTCCACTGACGGTTCAAGCCTTGTTCAGTCCTATCAAACCCCATCAATGGTTGAGATGCTTACTCGATCTCAGGCTATGTTGTTGGGCAGTCCATCAGCTCAGAGGCATATCCGACCATTATGTTCACAACCGAAGCCGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

719

Amino Acids

77.5

Weight (kDa)

8.44

Isoelectric Point (pI)

53.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 72 - 123 1.1e-07 RING-H2 zinc finger domain
zf-RING_2 PF13639 78 - 123 5.5e-08 Ring finger domain
zf-RING_11 PF17123 79 - 108 1.6e-09 RING-like zinc finger
zf-C3HC4 PF00097 79 - 122 1.8e-07 Zinc finger, C3HC4 type (RING finger)
VWA_CoxE PF05762 262 - 390 1.6e-09 VWA domain containing CoxE-like protein
VWA PF00092 274 - 456 2.7e-22 von Willebrand factor type A domain
VWA_3 PF13768 274 - 445 1.1e-17 von Willebrand factor type A domain
VWA_2 PF13519 275 - 381 1.5e-19 von Willebrand factor type A domain
WAV3_C PF25243 575 - 645 8.1e-06 E3 ubiquitin-protein ligase WAV3-like, C-terminal domain
Vwaint PF14624 624 - 696 1e-20 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012886)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G38970
fragaria_vesca FvH4_7g19190 FvH4_7g19190
malus_domestica MD01G1107300.v1.1 MD07G1173100.v1.1
pyrus_communis pycom01g13410 pycom07g16770
rosa_chinensis RchiOBHm_Chr1g0363051
rosa_laevigata RLG00000027598
rosa_multiflora Rmu_sc0004472.1_g000004
rosa_roxburghii Rroxscaffold_4G00293520
rosa_rugosa Rorug01G0304000 Rorug01G0304000
rosa_samantha Rh1AG313000 Rh1BG276200 Rh1CG293000 Rh1DG306900
rosa_wichuraiana Rw1G027730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1405
Acc36I ACCTGC 2 cut(s) 1405, 1696
AccB1I GGYRCC 1 cut(s) 427
AccB7I CCANNNNNTGG 1 cut(s) 592
AccBSI CCGCTC 1 cut(s) 1789
AccI GTMKAC 2 cut(s) 819, 1938
AciI CCGC 7 cut(s) 407, 737, 976, 1169, 1782, 1789, 1873
AclWI GGATC 3 cut(s) 588, 1625, 1638
AcoI YGGCCR 1 cut(s) 271
AcsI RAATTY 2 cut(s) 622, 637
AcuI CTGAAG 2 cut(s) 212, 1365
AcyI GRCGYC 1 cut(s) 997
AdeI CACNNNGTG 1 cut(s) 526
AfaI GTAC 1 cut(s) 1404
AfiI CCNNNNNNNGG 8 cut(s) 395, 419, 423, 424, 592, 924, 1788, 2062
AflII CTTAAG 1 cut(s) 1063
AgsI TTSAA 4 cut(s) 562, 1302, 1823, 2031
AhdI GACNNNNNGTC 2 cut(s) 928, 957
AjnI CCWGG 6 cut(s) 155, 273, 418, 550, 822, 1356
AleI CACNNNNGTG 1 cut(s) 1224
Alw21I GWGCWC 3 cut(s) 814, 1902, 1982
Alw26I GTCTC 6 cut(s) 498, 1334, 1678, 1717, 1788, 1841
AlwI GGATC 3 cut(s) 588, 1625, 1638
AlwNI CAGNNNCTG 2 cut(s) 1009, 1697
AoxI GGCC 5 cut(s) 158, 187, 271, 449, 885
ApeKI GCWGC 7 cut(s) 122, 542, 596, 740, 1751, 1778, 1808
ApoI RAATTY 2 cut(s) 622, 637
Asp700I GAANNNNTTC 1 cut(s) 610
AspS9I GGNCC 7 cut(s) 159, 398, 409, 437, 885, 1044, 1323
AsuHPI GGTGA 6 cut(s) 126, 165, 575, 1238, 1624, 2024
AvaII GGWCC 5 cut(s) 398, 409, 437, 1044, 1323
AxyI CCTNAGG 1 cut(s) 672
BaeGI GKGCMC 1 cut(s) 430
BaeI ACNNNNGTAYC 2 cut(s) 1394, 1427
BalI TGGCCA 1 cut(s) 273
BamHI GGATCC 1 cut(s) 1630
BanI GGYRCC 1 cut(s) 427
BanII GRGCYC 3 cut(s) 152, 1902, 1982
BauI CACGAG 1 cut(s) 1773
BbsI GAAGAC 1 cut(s) 81
Bbv12I GWGCWC 3 cut(s) 814, 1902, 1982
BbvCI CCTCAGC 2 cut(s) 1536, 1755
BbvI GCAGC 7 cut(s) 109, 529, 583, 727, 1738, 1765, 1820
BccI CCATC 6 cut(s) 22, 178, 1130, 1915, 2065, 2116
BceAI ACGGC 1 cut(s) 1334
BciT130I CCWGG 6 cut(s) 157, 275, 420, 552, 824, 1358
BclI TGATCA 1 cut(s) 1605
BcoDI GTCTC 6 cut(s) 498, 1334, 1678, 1717, 1788, 1841
BfaI CTAG 5 cut(s) 71, 201, 765, 1556, 1587
BfmI CTRYAG 3 cut(s) 288, 627, 1689
BfrI CTTAAG 1 cut(s) 1063
BfuAI ACCTGC 2 cut(s) 1405, 1696
BglII AGATCT 1 cut(s) 1525
BlpI GCTNAGC 2 cut(s) 546, 1785
Bme1390I CCNGG 6 cut(s) 157, 275, 420, 552, 824, 1358
Bme18I GGWCC 5 cut(s) 398, 409, 437, 1044, 1323
BmeRI GACNNNNNGTC 2 cut(s) 928, 957
BmgT120I GGNCC 7 cut(s) 159, 398, 409, 437, 885, 1044, 1323
BmiI GGNNCC 9 cut(s) 161, 400, 411, 429, 916, 1045, 1324, 1632, 1745
BmrFI CCNGG 6 cut(s) 157, 275, 420, 552, 824, 1358
BmrI ACTGGG 2 cut(s) 44, 353
BmuI ACTGGG 2 cut(s) 44, 353
BpiI GAAGAC 1 cut(s) 81
BplI GAGNNNNNCTC 2 cut(s) 593, 625
BpmI CTGGAG 2 cut(s) 798, 1338
Bpu10I CCTNAGC 3 cut(s) 1536, 1636, 1755
Bpu1102I GCTNAGC 2 cut(s) 546, 1785
BpuEI CTTGAG 2 cut(s) 529, 1886
Bsa29I ATCGAT 1 cut(s) 1292
BsaHI GRCGYC 1 cut(s) 997
BsaI GGTCTC 2 cut(s) 1678, 1841
BsaJI CCNNGG 5 cut(s) 418, 576, 888, 1450, 2153
Bsc4I CCNNNNNNNGG 8 cut(s) 395, 419, 423, 424, 592, 924, 1788, 2062
Bse118I RCCGGY 1 cut(s) 483
Bse1I ACTGG 6 cut(s) 39, 359, 440, 815, 997, 1250
Bse21I CCTNAGG 1 cut(s) 672
Bse3DI GCAATG 4 cut(s) 321, 872, 1050, 1767
BseBI CCWGG 6 cut(s) 157, 275, 420, 552, 824, 1358
BseCI ATCGAT 1 cut(s) 1292
BseDI CCNNGG 5 cut(s) 418, 576, 888, 1450, 2153
BseGI GGATG 5 cut(s) 33, 152, 1366, 1897, 1926
BseLI CCNNNNNNNGG 8 cut(s) 395, 419, 423, 424, 592, 924, 1788, 2062
BseMI GCAATG 4 cut(s) 321, 872, 1050, 1767
BseNI ACTGG 6 cut(s) 39, 359, 440, 815, 997, 1250
BseRI GAGGAG 3 cut(s) 483, 486, 1193
BseSI GKGCMC 1 cut(s) 430
BseXI GCAGC 7 cut(s) 109, 529, 583, 727, 1738, 1765, 1820
BseYI CCCAGC 1 cut(s) 1573
BsgI GTGCAG 2 cut(s) 1293, 1827
BshFI GGCC 5 cut(s) 160, 189, 273, 451, 887
BshNI GGYRCC 1 cut(s) 427
BshVI ATCGAT 1 cut(s) 1292
BsiHKAI GWGCWC 3 cut(s) 814, 1902, 1982
BsiSI CCGG 1 cut(s) 484
BslFI GGGAC 4 cut(s) 384, 1057, 1336, 1556
BslI CCNNNNNNNGG 8 cut(s) 395, 419, 423, 424, 592, 924, 1788, 2062
BsmAI GTCTC 6 cut(s) 498, 1334, 1678, 1717, 1788, 1841
BsmFI GGGAC 4 cut(s) 384, 1057, 1336, 1556
BsmI GAATGC 1 cut(s) 1297
BsnI GGCC 5 cut(s) 160, 189, 273, 451, 887
Bso31I GGTCTC 2 cut(s) 1678, 1841
Bsp1286I GDGCHC 5 cut(s) 152, 430, 814, 1902, 1982
Bsp143I GATC 7 cut(s) 580, 1090, 1276, 1525, 1605, 1630, 2081
Bsp1720I GCTNAGC 2 cut(s) 546, 1785
Bsp19I CCATGG 1 cut(s) 888
BspACI CCGC 7 cut(s) 407, 737, 976, 1169, 1782, 1789, 1873
BspANI GGCC 5 cut(s) 160, 189, 273, 451, 887
BspDI ATCGAT 1 cut(s) 1292
BspLI GGNNCC 9 cut(s) 161, 400, 411, 429, 916, 1045, 1324, 1632, 1745
BspMAI CTGCAG 3 cut(s) 292, 631, 1693
BspMI ACCTGC 2 cut(s) 1405, 1696
BspPI GGATC 3 cut(s) 588, 1625, 1638
BspQI GCTCTTC 1 cut(s) 616
BspT107I GGYRCC 1 cut(s) 427
BspTI CTTAAG 1 cut(s) 1063
BspTNI GGTCTC 2 cut(s) 1678, 1841
BsrBI CCGCTC 1 cut(s) 1789
BsrDI GCAATG 4 cut(s) 321, 872, 1050, 1767
BsrFI RCCGGY 1 cut(s) 483
BsrI ACTGG 6 cut(s) 39, 359, 440, 815, 997, 1250
BssAI RCCGGY 1 cut(s) 483
BssECI CCNNGG 5 cut(s) 418, 576, 888, 1450, 2153
BssMI GATC 7 cut(s) 580, 1090, 1276, 1525, 1605, 1630, 2081
BssNAI GTATAC 1 cut(s) 1939
BssNI GRCGYC 1 cut(s) 997
BssSI CACGAG 1 cut(s) 1773
BssT1I CCWWGG 3 cut(s) 576, 888, 1450
Bst1107I GTATAC 1 cut(s) 1939
Bst2BI CACGAG 1 cut(s) 1773
Bst2UI CCWGG 6 cut(s) 157, 275, 420, 552, 824, 1358
Bst6I CTCTTC 5 cut(s) 99, 496, 616, 952, 1536
BstACI GRCGYC 1 cut(s) 997
BstAFI CTTAAG 1 cut(s) 1063
BstAPI GCANNNNNTGC 4 cut(s) 526, 1009, 1778, 1892
BstC8I GCNNGC 8 cut(s) 485, 785, 870, 1001, 1005, 1014, 1117, 1257
BstDSI CCRYGG 1 cut(s) 888
BstENI CCTNNNNNAGG 1 cut(s) 393
BstF5I GGATG 5 cut(s) 33, 152, 1366, 1897, 1926
BstKTI GATC 7 cut(s) 583, 1093, 1279, 1528, 1608, 1633, 2084
BstMAI GTCTC 6 cut(s) 498, 1334, 1678, 1717, 1788, 1841
BstMBI GATC 7 cut(s) 580, 1090, 1276, 1525, 1605, 1630, 2081
BstNI CCWGG 6 cut(s) 157, 275, 420, 552, 824, 1358
BstNSI RCATGY 2 cut(s) 1259, 1937
BstSCI CCNGG 6 cut(s) 155, 273, 418, 550, 822, 1356
BstSFI CTRYAG 3 cut(s) 288, 627, 1689
BstSLI GKGCMC 1 cut(s) 430
BstV1I GCAGC 7 cut(s) 109, 529, 583, 727, 1738, 1765, 1820
BstV2I GAAGAC 1 cut(s) 81
BstX2I RGATCY 2 cut(s) 1525, 1630
BstXI CCANNNNNNTGG 1 cut(s) 447
BstYI RGATCY 2 cut(s) 1525, 1630
BstZ17I GTATAC 1 cut(s) 1939
Bsu15I ATCGAT 1 cut(s) 1292
Bsu36I CCTNAGG 1 cut(s) 672
BsuRI GGCC 5 cut(s) 160, 189, 273, 451, 887
BsuTUI ATCGAT 1 cut(s) 1292
BtgI CCRYGG 1 cut(s) 888
BtsCI GGATG 5 cut(s) 33, 152, 1366, 1897, 1926
BtsI GCAGTG 4 cut(s) 285, 316, 402, 1698
BveI ACCTGC 2 cut(s) 1405, 1696
Cac8I GCNNGC 8 cut(s) 485, 785, 870, 1001, 1005, 1014, 1117, 1257
CaiI CAGNNNCTG 2 cut(s) 1009, 1697
Cfr10I RCCGGY 1 cut(s) 483
Cfr13I GGNCC 7 cut(s) 159, 398, 409, 437, 885, 1044, 1323
ClaI ATCGAT 1 cut(s) 1292
CseI GACGC 1 cut(s) 1005
CsiI ACCWGGT 1 cut(s) 822
Csp6I GTAC 1 cut(s) 1403
CspCI CAANNNNNGTGG 2 cut(s) 1704, 1739
CviAII CATG 6 cut(s) 341, 853, 889, 1256, 1934, 1989
CviQI GTAC 1 cut(s) 1403
DpnI GATC 7 cut(s) 582, 1092, 1278, 1527, 1607, 1632, 2083
DpnII GATC 7 cut(s) 580, 1090, 1276, 1525, 1605, 1630, 2081
DraIII CACNNNGTG 1 cut(s) 526
DriI GACNNNNNGTC 2 cut(s) 928, 957
EaeI YGGCCR 1 cut(s) 271
Eam1104I CTCTTC 5 cut(s) 99, 496, 616, 952, 1536
Eam1105I GACNNNNNGTC 2 cut(s) 928, 957
EarI CTCTTC 5 cut(s) 99, 496, 616, 952, 1536
EciI GGCGGA 1 cut(s) 965
Ecl136II GAGCTC 2 cut(s) 1900, 1980
Eco130I CCWWGG 3 cut(s) 576, 888, 1450
Eco24I GRGCYC 3 cut(s) 152, 1902, 1982
Eco31I GGTCTC 2 cut(s) 1678, 1841
Eco32I GATATC 1 cut(s) 1314
Eco47I GGWCC 5 cut(s) 398, 409, 437, 1044, 1323
Eco53kI GAGCTC 2 cut(s) 1900, 1980
Eco57I CTGAAG 2 cut(s) 212, 1365
Eco81I CCTNAGG 1 cut(s) 672
EcoICRI GAGCTC 2 cut(s) 1900, 1980
EcoNI CCTNNNNNAGG 1 cut(s) 393
EcoO109I RGGNCCY 3 cut(s) 159, 398, 1323
EcoRII CCWGG 6 cut(s) 155, 273, 418, 550, 822, 1356
EcoRV GATATC 1 cut(s) 1314
EcoT14I CCWWGG 3 cut(s) 576, 888, 1450
EcoT22I ATGCAT 5 cut(s) 1261, 1288, 1299, 1366, 1622
EcoT38I GRGCYC 3 cut(s) 152, 1902, 1982
ErhI CCWWGG 3 cut(s) 576, 888, 1450
FaeI CATG 6 cut(s) 344, 856, 892, 1259, 1937, 1992
FalI AAGNNNNNCTT 2 cut(s) 1619, 1651
FaqI GGGAC 4 cut(s) 384, 1057, 1336, 1556
FatI CATG 6 cut(s) 340, 852, 888, 1255, 1933, 1988
FauI CCCGC 1 cut(s) 1782
FbaI TGATCA 1 cut(s) 1605
FblI GTMKAC 2 cut(s) 819, 1938
FokI GGATG 5 cut(s) 40, 139, 1373, 1904, 1933
FriOI GRGCYC 3 cut(s) 152, 1902, 1982
FspBI CTAG 5 cut(s) 71, 201, 765, 1556, 1587
GsaI CCCAGC 1 cut(s) 1577
GsuI CTGGAG 2 cut(s) 798, 1338
HaeIII GGCC 5 cut(s) 160, 189, 273, 451, 887
HapII CCGG 1 cut(s) 484
HgaI GACGC 1 cut(s) 1005
Hin1I GRCGYC 1 cut(s) 997
Hin1II CATG 6 cut(s) 344, 856, 892, 1259, 1937, 1992
HincII GTYRAC 1 cut(s) 1021
HindII GTYRAC 1 cut(s) 1021
HindIII AAGCTT 1 cut(s) 866
HpaII CCGG 1 cut(s) 484
HphI GGTGA 6 cut(s) 126, 165, 575, 1238, 1624, 2024
Hpy166II GTNNAC 8 cut(s) 299, 820, 1021, 1457, 1499, 1726, 1939, 2141
Hpy188III TCNNGA 6 cut(s) 201, 1142, 1243, 1280, 1317, 1971
Hpy8I GTNNAC 8 cut(s) 299, 820, 1021, 1457, 1499, 1726, 1939, 2141
Hpy99I CGWCG 2 cut(s) 810, 963
HpyAV CCTTC 8 cut(s) 13, 96, 373, 417, 423, 952, 1052, 1827
HpyCH4IV ACGT 2 cut(s) 1501, 1735
HpySE526I ACGT 2 cut(s) 1501, 1735
Hsp92I GRCGYC 1 cut(s) 997
Hsp92II CATG 6 cut(s) 344, 856, 892, 1259, 1937, 1992
KroI GCCGGC 1 cut(s) 483
KroNI GCCGGC 1 cut(s) 485
Ksp22I TGATCA 1 cut(s) 1605
Kzo9I GATC 7 cut(s) 580, 1090, 1276, 1525, 1605, 1630, 2081
LguI GCTCTTC 1 cut(s) 616
LmnI GCTCC 5 cut(s) 210, 817, 920, 1206, 1749
Lsp1109I GCAGC 7 cut(s) 109, 529, 583, 727, 1738, 1765, 1820
MabI ACCWGGT 1 cut(s) 822
MaeI CTAG 5 cut(s) 71, 201, 765, 1556, 1587
MaeII ACGT 2 cut(s) 1501, 1735
MaeIII GTNAC 5 cut(s) 685, 826, 1226, 1472, 2012
MalI GATC 7 cut(s) 582, 1092, 1278, 1527, 1607, 1632, 2083
MbiI CCGCTC 1 cut(s) 1789
MboI GATC 7 cut(s) 580, 1090, 1276, 1525, 1605, 1630, 2081
MflI RGATCY 2 cut(s) 1525, 1630
MhlI GDGCHC 5 cut(s) 152, 430, 814, 1902, 1982
MlsI TGGCCA 1 cut(s) 273
MluCI AATT 7 cut(s) 142, 622, 637, 791, 1189, 1302, 1677
MluNI TGGCCA 1 cut(s) 273
MlyI GAGTC 3 cut(s) 71, 92, 2009
MmeI TCCRAC 3 cut(s) 1501, 1654, 2152
Mox20I TGGCCA 1 cut(s) 273
Mph1103I ATGCAT 5 cut(s) 1261, 1288, 1299, 1366, 1622
MroNI GCCGGC 1 cut(s) 483
MroXI GAANNNNTTC 1 cut(s) 610
MscI TGGCCA 1 cut(s) 273
MseI TTAA 3 cut(s) 1064, 1566, 1814
MslI CAYNNNNRTG 2 cut(s) 1224, 1987
Msp20I TGGCCA 1 cut(s) 273
MspA1I CMGCKG 2 cut(s) 683, 1784
MspCI CTTAAG 1 cut(s) 1063
MspI CCGG 1 cut(s) 484
MspR9I CCNGG 6 cut(s) 157, 275, 420, 552, 824, 1358
Mva1269I GAATGC 1 cut(s) 1297
MvaI CCWGG 6 cut(s) 157, 275, 420, 552, 824, 1358
NaeI GCCGGC 1 cut(s) 485
NcoI CCATGG 1 cut(s) 888
NdeII GATC 7 cut(s) 580, 1090, 1276, 1525, 1605, 1630, 2081
NgoMIV GCCGGC 1 cut(s) 483
NlaIII CATG 6 cut(s) 344, 856, 892, 1259, 1937, 1992
NlaIV GGNNCC 9 cut(s) 161, 400, 411, 429, 916, 1045, 1324, 1632, 1745
NmeAIII GCCGAG 1 cut(s) 1921
NmuCI GTSAC 3 cut(s) 826, 1226, 2012
NsiI ATGCAT 5 cut(s) 1261, 1288, 1299, 1366, 1622
NspI RCATGY 2 cut(s) 1259, 1937
OliI CACNNNNGTG 1 cut(s) 1224
PaeI GCATGC 1 cut(s) 1259
PaqCI CACCTGC 1 cut(s) 1405
PciSI GCTCTTC 1 cut(s) 616
PctI GAATGC 1 cut(s) 1297
PdiI GCCGGC 1 cut(s) 485
PdmI GAANNNNTTC 1 cut(s) 610
PfeI GAWTC 7 cut(s) 43, 572, 698, 802, 907, 1105, 1246
PflFI GACNNNGTC 2 cut(s) 824, 1852
PflMI CCANNNNNTGG 1 cut(s) 592
PfoI TCCNGGA 1 cut(s) 1356
PleI GAGTC 3 cut(s) 71, 92, 2009
PpsI GAGTC 3 cut(s) 71, 92, 2009
PpuMI RGGWCCY 2 cut(s) 398, 1323
Psp124BI GAGCTC 2 cut(s) 1902, 1982
Psp5II RGGWCCY 2 cut(s) 398, 1323
Psp6I CCWGG 6 cut(s) 155, 273, 418, 550, 822, 1356
PspFI CCCAGC 1 cut(s) 1573
PspGI CCWGG 6 cut(s) 155, 273, 418, 550, 822, 1356
PspN4I GGNNCC 9 cut(s) 161, 400, 411, 429, 916, 1045, 1324, 1632, 1745
PspPI GGNCC 7 cut(s) 159, 398, 409, 437, 885, 1044, 1323
PspPPI RGGWCCY 2 cut(s) 398, 1323
PstI CTGCAG 3 cut(s) 292, 631, 1693
PstNI CAGNNNCTG 2 cut(s) 1009, 1697
PsuI RGATCY 2 cut(s) 1525, 1630
PsyI GACNNNGTC 2 cut(s) 824, 1852
PvuII CAGCTG 1 cut(s) 683
RsaI GTAC 1 cut(s) 1404
RsaNI GTAC 1 cut(s) 1403
RseI CAYNNNNRTG 2 cut(s) 1224, 1987
SacI GAGCTC 2 cut(s) 1902, 1982
SapI GCTCTTC 1 cut(s) 616
SaqAI TTAA 3 cut(s) 1064, 1566, 1814
Sau3AI GATC 7 cut(s) 580, 1090, 1276, 1525, 1605, 1630, 2081
Sau96I GGNCC 7 cut(s) 159, 398, 409, 437, 885, 1044, 1323
SchI GAGTC 3 cut(s) 71, 92, 2009
ScrFI CCNGG 6 cut(s) 157, 275, 420, 552, 824, 1358
SduI GDGCHC 5 cut(s) 152, 430, 814, 1902, 1982
SexAI ACCWGGT 1 cut(s) 822
SfcI CTRYAG 3 cut(s) 288, 627, 1689
SinI GGWCC 5 cut(s) 398, 409, 437, 1044, 1323
SmiMI CAYNNNNRTG 2 cut(s) 1224, 1987
SmlI CTYRAG 3 cut(s) 508, 1063, 1901
SmoI CTYRAG 3 cut(s) 508, 1063, 1901
SphI GCATGC 1 cut(s) 1259
Sse9I AATT 7 cut(s) 142, 622, 637, 791, 1189, 1302, 1677
SsiI CCGC 7 cut(s) 407, 737, 976, 1169, 1782, 1789, 1873
SspMI CTAG 5 cut(s) 71, 201, 765, 1556, 1587
SstI GAGCTC 2 cut(s) 1902, 1982
StyD4I CCNGG 6 cut(s) 155, 273, 418, 550, 822, 1356
StyI CCWWGG 3 cut(s) 576, 888, 1450
TaiI ACGT 2 cut(s) 1504, 1738
TaqI TCGA 6 cut(s) 239, 499, 950, 1292, 1831, 2080
TaqII GACCGA 1 cut(s) 1001
TasI AATT 7 cut(s) 142, 622, 637, 791, 1189, 1302, 1677
TauI GCSGC 3 cut(s) 740, 1172, 1784
TfiI GAWTC 7 cut(s) 43, 572, 698, 802, 907, 1105, 1246
Tru1I TTAA 3 cut(s) 1064, 1566, 1814
Tru9I TTAA 3 cut(s) 1064, 1566, 1814
TseFI GTSAC 3 cut(s) 826, 1226, 2012
TseI GCWGC 7 cut(s) 122, 542, 596, 740, 1751, 1778, 1808
Tsp45I GTSAC 3 cut(s) 826, 1226, 2012
TspDTI ATGAA 5 cut(s) 272, 299, 585, 648, 1324
Tth111I GACNNNGTC 2 cut(s) 824, 1852
Van91I CCANNNNNTGG 1 cut(s) 592
Vha464I CTTAAG 1 cut(s) 1063
VpaK11BI GGWCC 5 cut(s) 398, 409, 437, 1044, 1323
XagI CCTNNNNNAGG 1 cut(s) 393
XapI RAATTY 2 cut(s) 622, 637
XbaI TCTAGA 1 cut(s) 200
XceI RCATGY 2 cut(s) 1259, 1937
XmiI GTMKAC 2 cut(s) 819, 1938
XmnI GAANNNNTTC 1 cut(s) 610
XspI CTAG 5 cut(s) 71, 201, 765, 1556, 1587
Zsp2I ATGCAT 5 cut(s) 1261, 1288, 1299, 1366, 1622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.