Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013716

Physical Location & Seq

Genomic Coordinates Forward (+)

60552614 .. 60556576

Gene Structure 3963 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGATGAGGCAGGAAAACCATGGCGACGAAATTTCCGACCTCCGCGAATCCCAAGACGATATGGAATCTCTGGTCCTCGACGAGCCACCGTCATCATCCAACGGCCAGTCTTCTCCCTCCTCCTCCTCGGCCGCCGCACCACCATCAGCCGTCATAGACCGCCAGACTTCTGCCTCGCAACACTTCAACTCCATCCTCGAACCGCCGTCCTACGCCGACGCGATCTTCACCTCGTTCGATTCCTCCGCCTCCGCATCCAACGGCCACGACAGTCCCAGGCCCGAATCGGACCCCCCGGCCCGGTCCGAGTTCCTCAAGGTATGGGTCTCCGACCCGCAGAAGGAGCTCGAGCTCTCGAACTCGCTCGTCCCGGGGGGGACGTCGTACTACACCTACTTGATCACAACGCGGACCAATATGCCGGAGTACGGCGGGGACGGATCGGAGTTCACGGTGCGGCGGCGGTTCAAGGACGTGGTGACGTTATCGGACCGGTTGTCCGAGTCGTACCGCGGGTTCTTCATCCCAATCCGACCCGATAAGAGCGTGGTGGAGAGCCAGGTGATGCAAATCGAGCAGTTCGTCGAGCAGAGAAGGGCGGCGTTGAGTAAGTACCTGAACAAGCTCGCGGCGCACCCGGCGATCAGGAGGAGCGAGGAATTGAGAGTGTTTTTGGTTGTGAAAGGGAAGCTGCCGTTGATGAGGAGTGTGGATGTGGCGTCGAGGATGTTGGATGGGGCGGTGAGGCTGCCGAGGCAGTTGGTTGGTGAGGCGGTGGATGCGAACGAGGCGGCGCAGCCTGCCAAGGGCGGGAGAGACTTGATGAGGATCTTCAGAGAGTTGAAGCAGTCTGTGGTGAATGACTGGGGAGGTGTGAAGCCAATGGTAGCGGAGGAGGATAAGGAGTTCTTGGAGAAGAAGGAGAAGGTGGTGGAGCTTGAGCAACAGCTTAGCAATATGTCACAGCAGGCTGAGTTGCTAGTAAAAGCTCAGCAAGATATGGGAGAGACTATGGGGGAATTGGGTTTGGCGTTTGTGAAGCTGACCAAGCTTGAAACGGAAGGAGCCATGTTCGAATCTCAAACAACACGAGCCACTGACATGAAAAATGTGGCTACAGCAGCTGTTAAATCTAGCCGATTGTACCGGGAGTTAAATGCACAAACTGTTAAACACTTGGACAAACTCCATGAATATCTTGGAGTAATGTTAGCAGTCAACGGTGCATTTTCAGACCGAACAAGCGCTTTACTAACGGTGCAAACTCTTTCATCAGACTTGGTTTCCCTGCAGTCAAGGATTGAGAAGCTTGAAGCTGCAGCATCCAAAATATTTGGTGGAGACAGGTCCAGGATGCGGAAAATAGAGGAGTTAAAAGAAACTTTAAAAGTTAGTGAGGAAGCCAAAGCTTGTGCAGTTAAAGAGTATGAACGCATCAAGGAAAATAACAGGAATGAACTTGAAAGGCTTGATAGAGAGAGACATGACGATTTTATGGGAATGTTGAAAGGATTTGTTCTTAATCAGGCAGGATATGCAGAAAAGATGGCAAATGCATGGGAGAAGCTTGCGGAAGAAACCAGTGGGTACGCAAAAGATGGCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005794 GO:0005802 GO:0005829 GO:0006807 GO:0006810 GO:0006897 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008289 GO:0009791 GO:0009987 GO:0010008 GO:0010467 GO:0012505 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019538 GO:0019898 GO:0030904 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032585 GO:0032588 GO:0032991 GO:0035091 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048856 GO:0051179 GO:0051234 GO:0051604 GO:0071704 GO:0071840 GO:0090351 GO:0097708 GO:0098588 GO:0098657 GO:0098791 GO:0098796 GO:0098805 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

PX Vps5

Protein Analysis

535

Amino Acids

59.67

Weight (kDa)

5.35

Isoelectric Point (pI)

48.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PX	PF00787	145 - 226	1.2e-16	PX domain
Vps5	PF09325	293 - 525	4.2e-20	Vps5 C terminal like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013716)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g25340 FvH4_7g25340 FvH4_7g25340
malus_domestica	MD01G1159500.v1.1 MD07G1228000.v1.1
prunus_persica	Prupe.2G257500_v2.0.a1
pyrus_communis	pycom01g17580 pycom07g20640
rosa_chinensis	RchiOBHm_Chr1g0371251
rosa_laevigata	RLG00000026976
rosa_roxburghii	Rroxscaffold_4G00285840
rosa_rugosa	Rorug01G0362400 Rorug01G0362400
rosa_samantha	Rh1AG372500 Rh1BG336000 Rh1CG349400 Rh1DG367100
rosa_wichuraiana	Rw1G032760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	383
AccII	CGCG	5 cut(s)	45, 221, 409, 513, 629
AclWI	GGATC	2 cut(s)	448, 836
AcoI	YGGCCR	3 cut(s)	103, 129, 262
AcsI	RAATTY	1 cut(s)	30
AcuI	CTGAAG	1 cut(s)	817
AcyI	GRCGYC	2 cut(s)	380, 719
AfaI	GTAC	6 cut(s)	386, 428, 509, 614, 1145, 1589
AfeI	AGCGCT	1 cut(s)	1246
AfiI	CCNNNNNNNGG	6 cut(s)	300, 340, 428, 806, 810, 1356
AgeI	ACCGGT	1 cut(s)	492
AgsI	TTSAA	7 cut(s)	187, 469, 844, 1055, 1313, 1463, 1507
AhdI	GACNNNNNGTC	1 cut(s)	496
AjiI	CACGTC	1 cut(s)	475
AjnI	CCWGG	3 cut(s)	275, 558, 1349
AloI	GAACNNNNNNTCC	2 cut(s)	890, 922
Alw21I	GWGCWC	2 cut(s)	348, 354
Alw26I	GTCTC	5 cut(s)	331, 810, 1001, 1335, 1474
AlwI	GGATC	2 cut(s)	448, 836
AlwNI	CAGNNNCTG	1 cut(s)	1124
Ama87I	CYCGRG	2 cut(s)	347, 370
Aor51HI	AGCGCT	1 cut(s)	1246
AoxI	GGCC	5 cut(s)	103, 129, 262, 278, 297
ApeKI	GCWGC	7 cut(s)	691, 748, 796, 1121, 1316, 1319, 1602
ApoI	RAATTY	1 cut(s)	30
AsiGI	ACCGGT	1 cut(s)	492
AspLEI	GCGC	3 cut(s)	634, 796, 1247
AspS9I	GGNCC	8 cut(s)	73, 279, 289, 298, 303, 411, 490, 1347
AsuC2I	CCSGG	6 cut(s)	296, 301, 371, 372, 638, 1148
AsuHPI	GGTGA	6 cut(s)	220, 490, 574, 754, 779, 868
AsuII	TTCGAA	1 cut(s)	1074
AvaI	CYCGRG	2 cut(s)	347, 370
AvaII	GGWCC	6 cut(s)	73, 289, 303, 411, 490, 1347
BanII	GRGCYC	2 cut(s)	348, 354
BauI	CACGAG	1 cut(s)	1089
BbsI	GAAGAC	1 cut(s)	102
Bbv12I	GWGCWC	2 cut(s)	348, 354
BbvI	GCAGC	6 cut(s)	678, 735, 808, 1133, 1303, 1331
BccI	CCATC	5 cut(s)	151, 200, 728, 1540, 1592
BceAI	ACGGC	6 cut(s)	118, 134, 190, 277, 445, 679
BciT130I	CCWGG	3 cut(s)	277, 560, 1351
BclI	TGATCA	1 cut(s)	399
BcnI	CCSGG	6 cut(s)	296, 301, 371, 372, 638, 1148
BcoDI	GTCTC	5 cut(s)	331, 810, 1001, 1335, 1474
BfaI	CTAG	2 cut(s)	980, 1134
BfmI	CTRYAG	3 cut(s)	1116, 1289, 1317
BfoI	RGCGCY	1 cut(s)	1248
BlpI	GCTNAGC	2 cut(s)	950, 990
Bme1390I	CCNGG	9 cut(s)	277, 296, 301, 371, 372, 560, 638, 1148, 1351
Bme18I	GGWCC	6 cut(s)	73, 289, 303, 411, 490, 1347
BmeRI	GACNNNNNGTC	1 cut(s)	496
BmeT110I	CYCGRG	2 cut(s)	347, 370
BmgBI	CACGTC	1 cut(s)	475
BmgT120I	GGNCC	8 cut(s)	73, 279, 289, 298, 303, 411, 490, 1347
BmiI	GGNNCC	2 cut(s)	291, 1066
BmrFI	CCNGG	9 cut(s)	277, 296, 301, 371, 372, 560, 638, 1148, 1351
BmrI	ACTGGG	1 cut(s)	874
BmsI	GCATC	6 cut(s)	263, 555, 769, 1331, 1344, 1443
BmuI	ACTGGG	1 cut(s)	874
BpiI	GAAGAC	1 cut(s)	102
Bpu1102I	GCTNAGC	2 cut(s)	950, 990
Bpu14I	TTCGAA	1 cut(s)	1074
BpuEI	CTTGAG	2 cut(s)	299, 959
BpuMI	CCSGG	6 cut(s)	296, 301, 371, 372, 638, 1148
BsaBI	GATNNNNATC	2 cut(s)	569, 827
BsaHI	GRCGYC	2 cut(s)	380, 719
BsaI	GGTCTC	1 cut(s)	331
BsaJI	CCNNGG	9 cut(s)	19, 126, 275, 294, 370, 371, 511, 752, 804
BsaWI	WCCGGW	1 cut(s)	492
BsaXI	ACNNNNNCTCC	2 cut(s)	173, 203
Bsc4I	CCNNNNNNNGG	6 cut(s)	300, 340, 428, 806, 810, 1356
Bse118I	RCCGGY	1 cut(s)	492
Bse1I	ACTGG	3 cut(s)	106, 869, 1581
Bse8I	GATNNNNATC	2 cut(s)	569, 827
BseBI	CCWGG	3 cut(s)	277, 560, 1351
BseDI	CCNNGG	9 cut(s)	19, 126, 275, 294, 370, 371, 511, 752, 804
BseJI	GATNNNNATC	2 cut(s)	569, 827
BseLI	CCNNNNNNNGG	6 cut(s)	300, 340, 428, 806, 810, 1356
BseMII	CTCAG	2 cut(s)	963, 1004
BseNI	ACTGG	3 cut(s)	106, 869, 1581
BseRI	GAGGAG	7 cut(s)	109, 112, 115, 664, 718, 908, 1382
BseX3I	CGGCCG	1 cut(s)	129
BseXI	GCAGC	6 cut(s)	678, 735, 808, 1133, 1303, 1331
BsgI	GTGCAG	1 cut(s)	1434
Bsh1236I	CGCG	5 cut(s)	45, 221, 409, 513, 629
Bsh1285I	CGRYCG	1 cut(s)	132
BshFI	GGCC	5 cut(s)	105, 131, 264, 280, 299
BshTI	ACCGGT	1 cut(s)	492
BsiEI	CGRYCG	1 cut(s)	132
BsiHKAI	GWGCWC	2 cut(s)	348, 354
BsiHKCI	CYCGRG	2 cut(s)	347, 370
BsiSI	CCGG	7 cut(s)	296, 301, 371, 422, 493, 638, 1147
BslFI	GGGAC	4 cut(s)	258, 353, 391, 449
BslI	CCNNNNNNNGG	6 cut(s)	300, 340, 428, 806, 810, 1356
BsmAI	GTCTC	5 cut(s)	331, 810, 1001, 1335, 1474
BsmFI	GGGAC	4 cut(s)	258, 353, 391, 449
BsnI	GGCC	5 cut(s)	105, 131, 264, 280, 299
Bso31I	GGTCTC	1 cut(s)	331
BsoBI	CYCGRG	2 cut(s)	347, 370
Bsp119I	TTCGAA	1 cut(s)	1074
Bsp1286I	GDGCHC	2 cut(s)	348, 354
Bsp143I	GATC	5 cut(s)	222, 399, 440, 642, 828
Bsp1720I	GCTNAGC	2 cut(s)	950, 990
Bsp19I	CCATGG	1 cut(s)	19
BspANI	GGCC	5 cut(s)	105, 131, 264, 280, 299
BspCNI	CTCAG	2 cut(s)	964, 1003
BspFNI	CGCG	5 cut(s)	45, 221, 409, 513, 629
BspLI	GGNNCC	2 cut(s)	291, 1066
BspMAI	CTGCAG	2 cut(s)	1293, 1321
BspPI	GGATC	2 cut(s)	448, 836
BspT104I	TTCGAA	1 cut(s)	1074
BspTNI	GGTCTC	1 cut(s)	331
BsrFI	RCCGGY	1 cut(s)	492
BsrI	ACTGG	3 cut(s)	106, 869, 1581
BssAI	RCCGGY	1 cut(s)	492
BssECI	CCNNGG	9 cut(s)	19, 126, 275, 294, 370, 371, 511, 752, 804
BssMI	GATC	5 cut(s)	222, 399, 440, 642, 828
BssNI	GRCGYC	2 cut(s)	380, 719
BssSI	CACGAG	1 cut(s)	1089
BssT1I	CCWWGG	2 cut(s)	19, 804
Bst2BI	CACGAG	1 cut(s)	1089
Bst2UI	CCWGG	3 cut(s)	277, 560, 1351
Bst4CI	ACNGT	6 cut(s)	90, 272, 454, 1168, 1223, 1258
BstACI	GRCGYC	2 cut(s)	380, 719
BstAPI	GCANNNNNTGC	1 cut(s)	1535
BstBI	TTCGAA	1 cut(s)	1074
BstC8I	GCNNGC	4 cut(s)	627, 801, 969, 1569
BstDEI	CTNAG	3 cut(s)	950, 972, 990
BstDSI	CCRYGG	2 cut(s)	19, 511
BstFNI	CGCG	5 cut(s)	45, 221, 409, 513, 629
BstH2I	RGCGCY	1 cut(s)	1248
BstHHI	GCGC	3 cut(s)	634, 796, 1247
BstKTI	GATC	5 cut(s)	225, 402, 443, 645, 831
BstMAI	GTCTC	5 cut(s)	331, 810, 1001, 1335, 1474
BstMBI	GATC	5 cut(s)	222, 399, 440, 642, 828
BstMCI	CGRYCG	1 cut(s)	132
BstNI	CCWGG	3 cut(s)	277, 560, 1351
BstSCI	CCNGG	9 cut(s)	275, 294, 299, 369, 370, 558, 636, 1146, 1349
BstSFI	CTRYAG	3 cut(s)	1116, 1289, 1317
BstUI	CGCG	5 cut(s)	45, 221, 409, 513, 629
BstV1I	GCAGC	6 cut(s)	678, 735, 808, 1133, 1303, 1331
BstV2I	GAAGAC	1 cut(s)	102
BstX2I	RGATCY	1 cut(s)	828
BstYI	RGATCY	1 cut(s)	828
BstZI	CGGCCG	1 cut(s)	129
BsuRI	GGCC	5 cut(s)	105, 131, 264, 280, 299
BtgI	CCRYGG	2 cut(s)	19, 511
BtrI	CACGTC	1 cut(s)	475
BtsIMutI	CAGTG	2 cut(s)	1095, 1588
Cac8I	GCNNGC	4 cut(s)	627, 801, 969, 1569
CaiI	CAGNNNCTG	1 cut(s)	1124
CfoI	GCGC	3 cut(s)	634, 796, 1247
Cfr10I	RCCGGY	1 cut(s)	492
Cfr13I	GGNCC	8 cut(s)	73, 279, 289, 298, 303, 411, 490, 1347
Cfr42I	CCGCGG	1 cut(s)	514
Cfr9I	CCCGGG	1 cut(s)	370
CpoI	CGGWCCG	2 cut(s)	303, 490
CseI	GACGC	2 cut(s)	227, 708
Csp6I	GTAC	6 cut(s)	385, 427, 508, 613, 1144, 1588
CspAI	ACCGGT	1 cut(s)	492
CspI	CGGWCCG	2 cut(s)	303, 490
CviAII	CATG	6 cut(s)	20, 1069, 1102, 1190, 1484, 1557
CviQI	GTAC	6 cut(s)	385, 427, 508, 613, 1144, 1588
DdeI	CTNAG	3 cut(s)	950, 972, 990
DpnI	GATC	5 cut(s)	224, 401, 442, 644, 830
DpnII	GATC	5 cut(s)	222, 399, 440, 642, 828
DraI	TTTAAA	1 cut(s)	1386
DriI	GACNNNNNGTC	1 cut(s)	496
EaeI	YGGCCR	3 cut(s)	103, 129, 262
EagI	CGGCCG	1 cut(s)	129
Eam1105I	GACNNNNNGTC	1 cut(s)	496
EciI	GGCGGA	1 cut(s)	235
Ecl136II	GAGCTC	2 cut(s)	346, 352
EclXI	CGGCCG	1 cut(s)	129
Eco130I	CCWWGG	2 cut(s)	19, 804
Eco24I	GRGCYC	2 cut(s)	348, 354
Eco31I	GGTCTC	1 cut(s)	331
Eco47I	GGWCC	6 cut(s)	73, 289, 303, 411, 490, 1347
Eco47III	AGCGCT	1 cut(s)	1246
Eco52I	CGGCCG	1 cut(s)	129
Eco53kI	GAGCTC	2 cut(s)	346, 352
Eco57I	CTGAAG	1 cut(s)	817
Eco88I	CYCGRG	2 cut(s)	347, 370
EcoICRI	GAGCTC	2 cut(s)	346, 352
EcoRII	CCWGG	3 cut(s)	275, 558, 1349
EcoT14I	CCWWGG	2 cut(s)	19, 804
EcoT22I	ATGCAT	1 cut(s)	1558
EcoT38I	GRGCYC	2 cut(s)	348, 354
ErhI	CCWWGG	2 cut(s)	19, 804
FaeI	CATG	6 cut(s)	23, 1072, 1105, 1193, 1487, 1560
FalI	AAGNNNNNCTT	2 cut(s)	893, 925
FaqI	GGGAC	4 cut(s)	258, 353, 391, 449
FatI	CATG	6 cut(s)	19, 1068, 1101, 1189, 1483, 1556
FauI	CCCGC	4 cut(s)	342, 425, 506, 803
FbaI	TGATCA	1 cut(s)	399
FriOI	GRGCYC	2 cut(s)	348, 354
FspBI	CTAG	2 cut(s)	980, 1134
GlaI	GCGC	3 cut(s)	633, 795, 1246
HaeII	RGCGCY	1 cut(s)	1248
HaeIII	GGCC	5 cut(s)	105, 131, 264, 280, 299
HapII	CCGG	7 cut(s)	296, 301, 371, 422, 493, 638, 1147
HgaI	GACGC	2 cut(s)	227, 708
HhaI	GCGC	3 cut(s)	634, 796, 1247
Hin1I	GRCGYC	2 cut(s)	380, 719
Hin1II	CATG	6 cut(s)	23, 1072, 1105, 1193, 1487, 1560
Hin6I	GCGC	3 cut(s)	632, 794, 1245
HinP1I	GCGC	3 cut(s)	632, 794, 1245
HincII	GTYRAC	1 cut(s)	1219
HindII	GTYRAC	1 cut(s)	1219
HindIII	AAGCTT	4 cut(s)	1049, 1307, 1407, 1565
HinfI	GANTC	6 cut(s)	47, 65, 239, 284, 503, 1076
HpaII	CCGG	7 cut(s)	296, 301, 371, 422, 493, 638, 1147
HphI	GGTGA	6 cut(s)	220, 490, 574, 754, 779, 868
Hpy166II	GTNNAC	2 cut(s)	450, 1219
Hpy188III	TCNNGA	2 cut(s)	355, 646
Hpy8I	GTNNAC	2 cut(s)	450, 1219
Hpy99I	CGWCG	6 cut(s)	29, 83, 221, 385, 587, 724
HpyAV	CCTTC	5 cut(s)	334, 588, 913, 919, 1055
HpyCH4III	ACNGT	6 cut(s)	90, 272, 454, 1168, 1223, 1258
HpyCH4IV	ACGT	3 cut(s)	380, 474, 482
HpyCH4V	TGCA	9 cut(s)	568, 1160, 1226, 1261, 1291, 1319, 1415, 1538, 1556
HpyF3I	CTNAG	3 cut(s)	950, 972, 990
HpySE526I	ACGT	3 cut(s)	380, 474, 482
Hsp92I	GRCGYC	2 cut(s)	380, 719
Hsp92II	CATG	6 cut(s)	23, 1072, 1105, 1193, 1487, 1560
HspAI	GCGC	3 cut(s)	632, 794, 1245
Ksp22I	TGATCA	1 cut(s)	399
KspI	CCGCGG	1 cut(s)	514
Kzo9I	GATC	5 cut(s)	222, 399, 440, 642, 828
LmnI	GCTCC	4 cut(s)	343, 651, 934, 1064
Lsp1109I	GCAGC	6 cut(s)	678, 735, 808, 1133, 1303, 1331
LweI	GCATC	6 cut(s)	263, 555, 769, 1331, 1344, 1443
MaeI	CTAG	2 cut(s)	980, 1134
MaeII	ACGT	3 cut(s)	380, 474, 482
MaeIII	GTNAC	2 cut(s)	478, 960
MalI	GATC	5 cut(s)	224, 401, 442, 644, 830
MboI	GATC	5 cut(s)	222, 399, 440, 642, 828
MboII	GAAGA	6 cut(s)	102, 217, 511, 823, 928, 1586
MflI	RGATCY	1 cut(s)	828
MhlI	GDGCHC	2 cut(s)	348, 354
MluCI	AATT	3 cut(s)	30, 659, 1019
MlyI	GAGTC	1 cut(s)	512
MmeI	TCCRAC	6 cut(s)	60, 123, 282, 354, 556, 711
Mph1103I	ATGCAT	1 cut(s)	1558
MseI	TTAA	7 cut(s)	1128, 1154, 1170, 1373, 1385, 1419, 1521
MslI	CAYNNNNRTG	1 cut(s)	1100
MspA1I	CMGCKG	3 cut(s)	513, 1124, 1605
MspI	CCGG	7 cut(s)	296, 301, 371, 422, 493, 638, 1147
MspR9I	CCNGG	9 cut(s)	277, 296, 301, 371, 372, 560, 638, 1148, 1351
MvaI	CCWGG	3 cut(s)	277, 560, 1351
MvnI	CGCG	5 cut(s)	45, 221, 409, 513, 629
NciI	CCSGG	6 cut(s)	296, 301, 371, 372, 638, 1148
NcoI	CCATGG	1 cut(s)	19
NdeII	GATC	5 cut(s)	222, 399, 440, 642, 828
NlaIII	CATG	6 cut(s)	23, 1072, 1105, 1193, 1487, 1560
NlaIV	GGNNCC	2 cut(s)	291, 1066
NmeAIII	GCCGAG	2 cut(s)	107, 777
NmuCI	GTSAC	2 cut(s)	478, 960
NsiI	ATGCAT	1 cut(s)	1558
NspV	TTCGAA	1 cut(s)	1074
PaeR7I	CTCGAG	1 cut(s)	347
PcsI	WCGNNNNNNNCGW	2 cut(s)	33, 579
PfeI	GAWTC	5 cut(s)	47, 65, 239, 284, 1076
PfoI	TCCNGGA	1 cut(s)	1349
PinAI	ACCGGT	1 cut(s)	492
PleI	GAGTC	1 cut(s)	511
PpsI	GAGTC	1 cut(s)	511
Psp124BI	GAGCTC	2 cut(s)	348, 354
Psp6I	CCWGG	3 cut(s)	275, 558, 1349
PspGI	CCWGG	3 cut(s)	275, 558, 1349
PspN4I	GGNNCC	2 cut(s)	291, 1066
PspPI	GGNCC	8 cut(s)	73, 279, 289, 298, 303, 411, 490, 1347
PspXI	VCTCGAGB	1 cut(s)	347
PsrI	GAACNNNNNNTAC	2 cut(s)	500, 532
PstI	CTGCAG	2 cut(s)	1293, 1321
PstNI	CAGNNNCTG	1 cut(s)	1124
PsuI	RGATCY	1 cut(s)	828
PvuII	CAGCTG	2 cut(s)	1124, 1605
RsaI	GTAC	6 cut(s)	386, 428, 509, 614, 1145, 1589
RsaNI	GTAC	6 cut(s)	385, 427, 508, 613, 1144, 1588
RseI	CAYNNNNRTG	1 cut(s)	1100
Rsr2I	CGGWCCG	2 cut(s)	303, 490
RsrII	CGGWCCG	2 cut(s)	303, 490
SacI	GAGCTC	2 cut(s)	348, 354
SacII	CCGCGG	1 cut(s)	514
SaqAI	TTAA	7 cut(s)	1128, 1154, 1170, 1373, 1385, 1419, 1521
Sau3AI	GATC	5 cut(s)	222, 399, 440, 642, 828
Sau96I	GGNCC	8 cut(s)	73, 279, 289, 298, 303, 411, 490, 1347
SchI	GAGTC	1 cut(s)	512
ScrFI	CCNGG	9 cut(s)	277, 296, 301, 371, 372, 560, 638, 1148, 1351
SduI	GDGCHC	2 cut(s)	348, 354
SfaNI	GCATC	6 cut(s)	263, 555, 769, 1331, 1344, 1443
SfcI	CTRYAG	3 cut(s)	1116, 1289, 1317
Sfr274I	CTCGAG	1 cut(s)	347
Sfr303I	CCGCGG	1 cut(s)	514
SfuI	TTCGAA	1 cut(s)	1074
SgrBI	CCGCGG	1 cut(s)	514
SinI	GGWCC	6 cut(s)	73, 289, 303, 411, 490, 1347
SlaI	CTCGAG	1 cut(s)	347
SmaI	CCCGGG	1 cut(s)	372
SmiMI	CAYNNNNRTG	1 cut(s)	1100
SmlI	CTYRAG	3 cut(s)	314, 347, 938
SmoI	CTYRAG	3 cut(s)	314, 347, 938
Sse9I	AATT	3 cut(s)	30, 659, 1019
SspI	AATATT	1 cut(s)	1332
SspMI	CTAG	2 cut(s)	980, 1134
SstI	GAGCTC	2 cut(s)	348, 354
StyD4I	CCNGG	9 cut(s)	275, 294, 299, 369, 370, 558, 636, 1146, 1349
StyI	CCWWGG	2 cut(s)	19, 804
TaaI	ACNGT	6 cut(s)	90, 272, 454, 1168, 1223, 1258
TaiI	ACGT	3 cut(s)	383, 477, 485
TaqI	TCGA	9 cut(s)	78, 198, 237, 348, 356, 573, 585, 722, 1074
TaqII	GACCGA	1 cut(s)	1251
TasI	AATT	3 cut(s)	30, 659, 1019
TauI	GCSGC	7 cut(s)	134, 137, 460, 463, 602, 632, 794
TfiI	GAWTC	5 cut(s)	47, 65, 239, 284, 1076
Tru1I	TTAA	7 cut(s)	1128, 1154, 1170, 1373, 1385, 1419, 1521
Tru9I	TTAA	7 cut(s)	1128, 1154, 1170, 1373, 1385, 1419, 1521
TscAI	CASTG	2 cut(s)	1102, 1588
TseFI	GTSAC	2 cut(s)	478, 960
TseI	GCWGC	7 cut(s)	691, 748, 796, 1121, 1316, 1319, 1602
Tsp45I	GTSAC	2 cut(s)	478, 960
TspDTI	ATGAA	6 cut(s)	511, 1118, 1206, 1260, 1443, 1470
TspGWI	ACGGA	2 cut(s)	453, 1073
TspMI	CCCGGG	1 cut(s)	370
TspRI	CASTG	2 cut(s)	1102, 1588
VpaK11BI	GGWCC	6 cut(s)	73, 289, 303, 411, 490, 1347
XapI	RAATTY	1 cut(s)	30
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1196
XhoI	CTCGAG	1 cut(s)	347
XmaI	CCCGGG	1 cut(s)	370
XspI	CTAG	2 cut(s)	980, 1134
ZraI	GACGTC	1 cut(s)	381
Zsp2I	ATGCAT	1 cut(s)	1558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.