Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0013716

Physical Location & Seq

Genomic Coordinates Forward (+)

47153073 .. 47160668

Gene Structure 7596 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG336000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGATGAGGCAGGAAAACCATGGCGACGAAATTTCCGACCTCCGCGAATCCCAAGACGAGATGGAATCTCTGGTCCTCGACGAACCACCGTCATCATCCAACGGCCAGTCTTCTCCCTCCTCCTCCGCCGCCGCACCACCATCAGCCGTCATAGACCGCCAGACTTCTGCCTCGCAACACTTCAACTCCATCCTCGAACCGCCGTCCTACGCCGACGCGATCTTCACCTCGTTCGATTCCTCCGCCTCCGCATCCAACGGCCACGACAGTCCCAGGCCCGAATCGGACCCTCCGGCCCGGTCCGAGTTCCTCAAGGTATGGGTCTCCGACCCTCAGAAGGAGCTCGAGCTCTCGAACTCGCTCGTCCCGGGGGGGACGTCGTACTACACCTACTTGATCACAACGCGGACCAATATGCCGGAGTACGGCGGGGACGGATCGGAGTTCACGGTGCGGCGGCGGTTCAAGGACGTGGTGACGTTATCGGACCGGTTGTCGGAGTCGTACCGCGGGTTCTTCATCCCAATCCGACCCGATAAGAGCGTGGTGGAGAGCCAGGTGATGCAAATCGAGCAGTTCGTCGAGCAGAGAAGGGCGGCGTTGAGTAAGTACCTGAACAAGCTCGCGGCGCACCCGGCGATCAGGAGGAGCGAGGAATTGAGAGTGTTTTTGGTTGTGAAAGGGAAGCTGCCGTTGATGAGGAGTGTGGATGTGGCGTCGAGGATGTTGGATGGGGCGGTGAGGCTGCCGAGGCAGTTGGTTGGTGAGGCGGTGGATGCGAACGAGGCTGCGCAGCCGGCCAAGGGCGGGAGAGACTTGATGAGGATCTTCAGGGAGTTGAAGCAGTCTGTGGTGAATGACTGGGGAGGTGTGAAGCCAATGGTGGCTGAGGAGGATAAGGAGTTCTTGGAGAAGAAGGAGAAGGTGGTGGAGTTTGAGCAACAGCTTAGCAATATGTCACAGCAGGCTGAGTTGCTAGTAAAAGCTCAGCAAGATATGGGAGAGACTATGGGGGAATTGGGTTTGGCGTTTGTGAAGCTGACCAAGCTTGAGACGGAAGGAGCCATGCTCGAATCTCAAACAACACTAGCCACTGACATGAAAAATGTGGCTACAGCAGCTGTTAAATCTAGCCGATTGTACCGGGAGTTAAATGCACAAACTGTTAAACATTTGGACAAACTCCATGAATTTCTTGGAGTAATGTTAGCAGTCAACGGTGCGTTTTCAGACCGAACAAGCGCTTTACTAACAGTGCAAACTCTTTCATCAGACTTGGTTTCCCTGCAGTCAAGGATTGAGAAGCTTGAAGCTGCAGCATCCAAAATATTTGGTGGAGACAGGTCCAGGATGCGGAAAATAGAGGAGTTAAAAGAAACTTTAAAAGTTAGTGAGGAAGCCAAAGCTTGTGCAGTTAAAGAGTATGAATGCATCAAGGTAACATATCAGGCCTCTAAACCTAGATTATTTGATTTGCATCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005794 GO:0005802 GO:0005829 GO:0006807 GO:0006810 GO:0006897 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008289 GO:0009791 GO:0009987 GO:0010008 GO:0010467 GO:0012505 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019538 GO:0019898 GO:0030904 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032585 GO:0032588 GO:0032991 GO:0035091 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048856 GO:0051179 GO:0051234 GO:0051604 GO:0071704 GO:0071840 GO:0090351 GO:0097708 GO:0098588 GO:0098657 GO:0098791 GO:0098796 GO:0098805 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

PX Vps5

Protein Analysis

494

Amino Acids

54.96

Weight (kDa)

5.55

Isoelectric Point (pI)

49.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PX	PF00787	144 - 225	1.1e-16	PX domain
Vps5	PF09325	292 - 442	1.9e-11	Vps5 C terminal like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013716)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g25340 FvH4_7g25340 FvH4_7g25340
malus_domestica	MD01G1159500.v1.1 MD07G1228000.v1.1
prunus_persica	Prupe.2G257500_v2.0.a1
pyrus_communis	pycom01g17580 pycom07g20640
rosa_chinensis	RchiOBHm_Chr1g0371251
rosa_laevigata	RLG00000026976
rosa_roxburghii	Rroxscaffold_4G00285840
rosa_rugosa	Rorug01G0362400 Rorug01G0362400
rosa_samantha	Rh1AG372500 Rh1BG336000 Rh1CG349400 Rh1DG367100
rosa_wichuraiana	Rw1G032760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	380
Acc16I	TGCGCA	1 cut(s)	792
AccII	CGCG	5 cut(s)	45, 218, 406, 510, 626
AclWI	GGATC	2 cut(s)	445, 833
AcoI	YGGCCR	3 cut(s)	103, 259, 798
AcsI	RAATTY	2 cut(s)	30, 1190
AcuI	CTGAAG	1 cut(s)	814
AcyI	GRCGYC	2 cut(s)	377, 716
AfaI	GTAC	5 cut(s)	383, 425, 506, 611, 1142
AfeI	AGCGCT	1 cut(s)	1243
AfiI	CCNNNNNNNGG	6 cut(s)	337, 425, 496, 803, 807, 1353
AgeI	ACCGGT	1 cut(s)	489
AgsI	TTSAA	4 cut(s)	184, 466, 841, 1310
AhdI	GACNNNNNGTC	1 cut(s)	493
AjiI	CACGTC	1 cut(s)	472
AjnI	CCWGG	3 cut(s)	272, 555, 1346
AloI	GAACNNNNNNTCC	2 cut(s)	887, 919
Alw21I	GWGCWC	2 cut(s)	345, 351
Alw26I	GTCTC	5 cut(s)	328, 807, 998, 1046, 1332
AlwI	GGATC	2 cut(s)	445, 833
AlwNI	CAGNNNCTG	1 cut(s)	1121
Ama87I	CYCGRG	2 cut(s)	344, 367
Aor51HI	AGCGCT	1 cut(s)	1243
AoxI	GGCC	6 cut(s)	103, 259, 275, 294, 798, 1449
ApeKI	GCWGC	7 cut(s)	688, 745, 788, 793, 1118, 1313, 1316
ApoI	RAATTY	2 cut(s)	30, 1190
AsiGI	ACCGGT	1 cut(s)	489
AspLEI	GCGC	3 cut(s)	631, 793, 1244
AspS9I	GGNCC	8 cut(s)	73, 276, 286, 295, 300, 408, 487, 1344
AsuC2I	CCSGG	5 cut(s)	298, 368, 369, 635, 1145
AsuHPI	GGTGA	6 cut(s)	217, 487, 571, 751, 776, 865
AvaI	CYCGRG	2 cut(s)	344, 367
AvaII	GGWCC	6 cut(s)	73, 286, 300, 408, 487, 1344
BanII	GRGCYC	2 cut(s)	345, 351
BbsI	GAAGAC	1 cut(s)	102
Bbv12I	GWGCWC	2 cut(s)	345, 351
BbvCI	CCTCAGC	1 cut(s)	888
BbvI	GCAGC	7 cut(s)	675, 732, 775, 805, 1130, 1300, 1328
BccI	CCATC	4 cut(s)	55, 148, 197, 725
BceAI	ACGGC	6 cut(s)	118, 131, 187, 274, 442, 676
BciT130I	CCWGG	3 cut(s)	274, 557, 1348
BclI	TGATCA	1 cut(s)	396
BcnI	CCSGG	5 cut(s)	298, 368, 369, 635, 1145
BcoDI	GTCTC	5 cut(s)	328, 807, 998, 1046, 1332
BfaI	CTAG	4 cut(s)	977, 1088, 1131, 1461
BfmI	CTRYAG	3 cut(s)	1113, 1286, 1314
BfoI	RGCGCY	1 cut(s)	1245
BlpI	GCTNAGC	2 cut(s)	947, 987
Bme1390I	CCNGG	8 cut(s)	274, 298, 368, 369, 557, 635, 1145, 1348
Bme18I	GGWCC	6 cut(s)	73, 286, 300, 408, 487, 1344
BmeRI	GACNNNNNGTC	1 cut(s)	493
BmeT110I	CYCGRG	2 cut(s)	344, 367
BmgBI	CACGTC	1 cut(s)	472
BmgT120I	GGNCC	8 cut(s)	73, 276, 286, 295, 300, 408, 487, 1344
BmiI	GGNNCC	2 cut(s)	288, 1063
BmrFI	CCNGG	8 cut(s)	274, 298, 368, 369, 557, 635, 1145, 1348
BmrI	ACTGGG	1 cut(s)	871
BmsI	GCATC	6 cut(s)	260, 552, 766, 1328, 1341, 1440
BmuI	ACTGGG	1 cut(s)	871
BpiI	GAAGAC	1 cut(s)	102
BplI	GAGNNNNNCTC	2 cut(s)	1053, 1085
Bpu10I	CCTNAGC	1 cut(s)	888
Bpu1102I	GCTNAGC	2 cut(s)	947, 987
BpuEI	CTTGAG	2 cut(s)	296, 1070
BpuMI	CCSGG	5 cut(s)	298, 368, 369, 635, 1145
BsaBI	GATNNNNATC	3 cut(s)	566, 824, 1476
BsaHI	GRCGYC	2 cut(s)	377, 716
BsaI	GGTCTC	1 cut(s)	328
BsaJI	CCNNGG	7 cut(s)	19, 272, 367, 368, 508, 749, 801
BsaWI	WCCGGW	1 cut(s)	489
BsaXI	ACNNNNNCTCC	2 cut(s)	170, 200
Bsc4I	CCNNNNNNNGG	6 cut(s)	337, 425, 496, 803, 807, 1353
Bse118I	RCCGGY	2 cut(s)	489, 796
Bse1I	ACTGG	2 cut(s)	106, 866
Bse8I	GATNNNNATC	3 cut(s)	566, 824, 1476
BseBI	CCWGG	3 cut(s)	274, 557, 1348
BseDI	CCNNGG	7 cut(s)	19, 272, 367, 368, 508, 749, 801
BseJI	GATNNNNATC	3 cut(s)	566, 824, 1476
BseLI	CCNNNNNNNGG	6 cut(s)	337, 425, 496, 803, 807, 1353
BseMII	CTCAG	4 cut(s)	347, 879, 960, 1001
BseNI	ACTGG	2 cut(s)	106, 866
BseRI	GAGGAG	6 cut(s)	109, 112, 661, 715, 905, 1379
BseXI	GCAGC	7 cut(s)	675, 732, 775, 805, 1130, 1300, 1328
BsgI	GTGCAG	1 cut(s)	1431
Bsh1236I	CGCG	5 cut(s)	45, 218, 406, 510, 626
BshFI	GGCC	6 cut(s)	105, 261, 277, 296, 800, 1451
BshTI	ACCGGT	1 cut(s)	489
BsiHKAI	GWGCWC	2 cut(s)	345, 351
BsiHKCI	CYCGRG	2 cut(s)	344, 367
BsiSI	CCGG	8 cut(s)	293, 298, 368, 419, 490, 635, 797, 1144
BslFI	GGGAC	4 cut(s)	255, 350, 388, 446
BslI	CCNNNNNNNGG	6 cut(s)	337, 425, 496, 803, 807, 1353
BsmAI	GTCTC	5 cut(s)	328, 807, 998, 1046, 1332
BsmBI	CGTCTC	1 cut(s)	1046
BsmFI	GGGAC	4 cut(s)	255, 350, 388, 446
BsmI	GAATGC	1 cut(s)	1433
BsnI	GGCC	6 cut(s)	105, 261, 277, 296, 800, 1451
Bso31I	GGTCTC	1 cut(s)	328
BsoBI	CYCGRG	2 cut(s)	344, 367
Bsp1286I	GDGCHC	2 cut(s)	345, 351
Bsp143I	GATC	5 cut(s)	219, 396, 437, 639, 825
Bsp1720I	GCTNAGC	2 cut(s)	947, 987
Bsp19I	CCATGG	1 cut(s)	19
BspANI	GGCC	6 cut(s)	105, 261, 277, 296, 800, 1451
BspCNI	CTCAG	4 cut(s)	346, 880, 961, 1000
BspFNI	CGCG	5 cut(s)	45, 218, 406, 510, 626
BspLI	GGNNCC	2 cut(s)	288, 1063
BspMAI	CTGCAG	2 cut(s)	1290, 1318
BspPI	GGATC	2 cut(s)	445, 833
BspTNI	GGTCTC	1 cut(s)	328
BsrFI	RCCGGY	2 cut(s)	489, 796
BsrI	ACTGG	2 cut(s)	106, 866
BssAI	RCCGGY	2 cut(s)	489, 796
BssECI	CCNNGG	7 cut(s)	19, 272, 367, 368, 508, 749, 801
BssMI	GATC	5 cut(s)	219, 396, 437, 639, 825
BssNI	GRCGYC	2 cut(s)	377, 716
BssT1I	CCWWGG	2 cut(s)	19, 801
Bst2UI	CCWGG	3 cut(s)	274, 557, 1348
Bst4CI	ACNGT	6 cut(s)	90, 269, 451, 1165, 1220, 1255
BstACI	GRCGYC	2 cut(s)	377, 716
BstC8I	GCNNGC	3 cut(s)	624, 798, 966
BstDEI	CTNAG	5 cut(s)	333, 888, 947, 969, 987
BstDSI	CCRYGG	2 cut(s)	19, 508
BstFNI	CGCG	5 cut(s)	45, 218, 406, 510, 626
BstH2I	RGCGCY	1 cut(s)	1245
BstHHI	GCGC	3 cut(s)	631, 793, 1244
BstKTI	GATC	5 cut(s)	222, 399, 440, 642, 828
BstMAI	GTCTC	5 cut(s)	328, 807, 998, 1046, 1332
BstMBI	GATC	5 cut(s)	219, 396, 437, 639, 825
BstMWI	GCNNNNNNNGC	9 cut(s)	571, 628, 635, 751, 776, 785, 797, 1045, 1118
BstNI	CCWGG	3 cut(s)	274, 557, 1348
BstSCI	CCNGG	8 cut(s)	272, 296, 366, 367, 555, 633, 1143, 1346
BstSFI	CTRYAG	3 cut(s)	1113, 1286, 1314
BstUI	CGCG	5 cut(s)	45, 218, 406, 510, 626
BstV1I	GCAGC	7 cut(s)	675, 732, 775, 805, 1130, 1300, 1328
BstV2I	GAAGAC	1 cut(s)	102
BstX2I	RGATCY	1 cut(s)	825
BstYI	RGATCY	1 cut(s)	825
BsuRI	GGCC	6 cut(s)	105, 261, 277, 296, 800, 1451
BtgI	CCRYGG	2 cut(s)	19, 508
BtrI	CACGTC	1 cut(s)	472
BtsIMutI	CAGTG	2 cut(s)	1092, 1260
Cac8I	GCNNGC	3 cut(s)	624, 798, 966
CaiI	CAGNNNCTG	1 cut(s)	1121
CfoI	GCGC	3 cut(s)	631, 793, 1244
Cfr10I	RCCGGY	2 cut(s)	489, 796
Cfr13I	GGNCC	8 cut(s)	73, 276, 286, 295, 300, 408, 487, 1344
Cfr42I	CCGCGG	1 cut(s)	511
Cfr9I	CCCGGG	1 cut(s)	367
CpoI	CGGWCCG	2 cut(s)	300, 487
CseI	GACGC	2 cut(s)	224, 705
Csp6I	GTAC	5 cut(s)	382, 424, 505, 610, 1141
CspAI	ACCGGT	1 cut(s)	489
CspI	CGGWCCG	2 cut(s)	300, 487
CviAII	CATG	4 cut(s)	20, 1066, 1099, 1187
CviQI	GTAC	5 cut(s)	382, 424, 505, 610, 1141
DdeI	CTNAG	5 cut(s)	333, 888, 947, 969, 987
DpnI	GATC	5 cut(s)	221, 398, 439, 641, 827
DpnII	GATC	5 cut(s)	219, 396, 437, 639, 825
DraI	TTTAAA	1 cut(s)	1383
DriI	GACNNNNNGTC	1 cut(s)	493
EaeI	YGGCCR	3 cut(s)	103, 259, 798
Eam1105I	GACNNNNNGTC	1 cut(s)	493
EciI	GGCGGA	2 cut(s)	115, 232
Ecl136II	GAGCTC	2 cut(s)	343, 349
Eco130I	CCWWGG	2 cut(s)	19, 801
Eco147I	AGGCCT	1 cut(s)	1451
Eco24I	GRGCYC	2 cut(s)	345, 351
Eco31I	GGTCTC	1 cut(s)	328
Eco47I	GGWCC	6 cut(s)	73, 286, 300, 408, 487, 1344
Eco47III	AGCGCT	1 cut(s)	1243
Eco53kI	GAGCTC	2 cut(s)	343, 349
Eco57I	CTGAAG	1 cut(s)	814
Eco88I	CYCGRG	2 cut(s)	344, 367
EcoICRI	GAGCTC	2 cut(s)	343, 349
EcoRII	CCWGG	3 cut(s)	272, 555, 1346
EcoT14I	CCWWGG	2 cut(s)	19, 801
EcoT22I	ATGCAT	1 cut(s)	1433
EcoT38I	GRGCYC	2 cut(s)	345, 351
ErhI	CCWWGG	2 cut(s)	19, 801
Esp3I	CGTCTC	1 cut(s)	1046
FaeI	CATG	4 cut(s)	23, 1069, 1102, 1190
FalI	AAGNNNNNCTT	2 cut(s)	890, 922
FaqI	GGGAC	4 cut(s)	255, 350, 388, 446
FatI	CATG	4 cut(s)	19, 1065, 1098, 1186
FauI	CCCGC	3 cut(s)	422, 503, 800
FbaI	TGATCA	1 cut(s)	396
FriOI	GRGCYC	2 cut(s)	345, 351
FspBI	CTAG	4 cut(s)	977, 1088, 1131, 1461
FspI	TGCGCA	1 cut(s)	792
GlaI	GCGC	3 cut(s)	630, 792, 1243
HaeII	RGCGCY	1 cut(s)	1245
HaeIII	GGCC	6 cut(s)	105, 261, 277, 296, 800, 1451
HapII	CCGG	8 cut(s)	293, 298, 368, 419, 490, 635, 797, 1144
HgaI	GACGC	2 cut(s)	224, 705
HhaI	GCGC	3 cut(s)	631, 793, 1244
Hin1I	GRCGYC	2 cut(s)	377, 716
Hin1II	CATG	4 cut(s)	23, 1069, 1102, 1190
Hin6I	GCGC	3 cut(s)	629, 791, 1242
HinP1I	GCGC	3 cut(s)	629, 791, 1242
HincII	GTYRAC	1 cut(s)	1216
HindII	GTYRAC	1 cut(s)	1216
HindIII	AAGCTT	3 cut(s)	1046, 1304, 1404
HinfI	GANTC	6 cut(s)	47, 65, 236, 281, 500, 1073
HpaII	CCGG	8 cut(s)	293, 298, 368, 419, 490, 635, 797, 1144
HphI	GGTGA	6 cut(s)	217, 487, 571, 751, 776, 865
Hpy166II	GTNNAC	2 cut(s)	447, 1216
Hpy188III	TCNNGA	2 cut(s)	352, 643
Hpy8I	GTNNAC	2 cut(s)	447, 1216
Hpy99I	CGWCG	6 cut(s)	29, 83, 218, 382, 584, 721
HpyAV	CCTTC	5 cut(s)	331, 585, 910, 916, 1052
HpyCH4III	ACNGT	6 cut(s)	90, 269, 451, 1165, 1220, 1255
HpyCH4IV	ACGT	3 cut(s)	377, 471, 479
HpyCH4V	TGCA	8 cut(s)	565, 1157, 1258, 1288, 1316, 1412, 1431, 1477
HpyF10VI	GCNNNNNNNGC	9 cut(s)	571, 628, 635, 751, 776, 785, 797, 1045, 1118
HpyF3I	CTNAG	5 cut(s)	333, 888, 947, 969, 987
HpySE526I	ACGT	3 cut(s)	377, 471, 479
Hsp92I	GRCGYC	2 cut(s)	377, 716
Hsp92II	CATG	4 cut(s)	23, 1069, 1102, 1190
HspAI	GCGC	3 cut(s)	629, 791, 1242
KroI	GCCGGC	1 cut(s)	796
KroNI	GCCGGC	1 cut(s)	798
Ksp22I	TGATCA	1 cut(s)	396
KspI	CCGCGG	1 cut(s)	511
Kzo9I	GATC	5 cut(s)	219, 396, 437, 639, 825
LmnI	GCTCC	3 cut(s)	340, 648, 1061
Lsp1109I	GCAGC	7 cut(s)	675, 732, 775, 805, 1130, 1300, 1328
LweI	GCATC	6 cut(s)	260, 552, 766, 1328, 1341, 1440
MaeI	CTAG	4 cut(s)	977, 1088, 1131, 1461
MaeII	ACGT	3 cut(s)	377, 471, 479
MaeIII	GTNAC	3 cut(s)	475, 957, 1438
MalI	GATC	5 cut(s)	221, 398, 439, 641, 827
MboI	GATC	5 cut(s)	219, 396, 437, 639, 825
MboII	GAAGA	5 cut(s)	102, 214, 508, 820, 925
MflI	RGATCY	1 cut(s)	825
MhlI	GDGCHC	2 cut(s)	345, 351
MluCI	AATT	4 cut(s)	30, 656, 1016, 1190
MlyI	GAGTC	1 cut(s)	509
MmeI	TCCRAC	7 cut(s)	60, 123, 279, 351, 477, 553, 708
Mph1103I	ATGCAT	1 cut(s)	1433
MroNI	GCCGGC	1 cut(s)	796
MseI	TTAA	6 cut(s)	1125, 1151, 1167, 1370, 1382, 1416
MslI	CAYNNNNRTG	1 cut(s)	1097
MspA1I	CMGCKG	2 cut(s)	510, 1121
MspI	CCGG	8 cut(s)	293, 298, 368, 419, 490, 635, 797, 1144
MspR9I	CCNGG	8 cut(s)	274, 298, 368, 369, 557, 635, 1145, 1348
Mva1269I	GAATGC	1 cut(s)	1433
MvaI	CCWGG	3 cut(s)	274, 557, 1348
MvnI	CGCG	5 cut(s)	45, 218, 406, 510, 626
MwoI	GCNNNNNNNGC	9 cut(s)	571, 628, 635, 751, 776, 785, 797, 1045, 1118
NaeI	GCCGGC	1 cut(s)	798
NciI	CCSGG	5 cut(s)	298, 368, 369, 635, 1145
NcoI	CCATGG	1 cut(s)	19
NdeII	GATC	5 cut(s)	219, 396, 437, 639, 825
NgoMIV	GCCGGC	1 cut(s)	796
NlaIII	CATG	4 cut(s)	23, 1069, 1102, 1190
NlaIV	GGNNCC	2 cut(s)	288, 1063
NmeAIII	GCCGAG	1 cut(s)	774
NmuCI	GTSAC	2 cut(s)	475, 957
NsbI	TGCGCA	1 cut(s)	792
NsiI	ATGCAT	1 cut(s)	1433
PaeR7I	CTCGAG	1 cut(s)	344
PceI	AGGCCT	1 cut(s)	1451
PcsI	WCGNNNNNNNCGW	2 cut(s)	33, 576
PctI	GAATGC	1 cut(s)	1433
PdiI	GCCGGC	1 cut(s)	798
PfeI	GAWTC	5 cut(s)	47, 65, 236, 281, 1073
PfoI	TCCNGGA	1 cut(s)	1346
PinAI	ACCGGT	1 cut(s)	489
PleI	GAGTC	1 cut(s)	508
PpsI	GAGTC	1 cut(s)	508
Psp124BI	GAGCTC	2 cut(s)	345, 351
Psp6I	CCWGG	3 cut(s)	272, 555, 1346
PspGI	CCWGG	3 cut(s)	272, 555, 1346
PspN4I	GGNNCC	2 cut(s)	288, 1063
PspPI	GGNCC	8 cut(s)	73, 276, 286, 295, 300, 408, 487, 1344
PspXI	VCTCGAGB	1 cut(s)	344
PsrI	GAACNNNNNNTAC	2 cut(s)	497, 529
PstI	CTGCAG	2 cut(s)	1290, 1318
PstNI	CAGNNNCTG	1 cut(s)	1121
PsuI	RGATCY	1 cut(s)	825
PvuII	CAGCTG	1 cut(s)	1121
RsaI	GTAC	5 cut(s)	383, 425, 506, 611, 1142
RsaNI	GTAC	5 cut(s)	382, 424, 505, 610, 1141
RseI	CAYNNNNRTG	1 cut(s)	1097
Rsr2I	CGGWCCG	2 cut(s)	300, 487
RsrII	CGGWCCG	2 cut(s)	300, 487
SacI	GAGCTC	2 cut(s)	345, 351
SacII	CCGCGG	1 cut(s)	511
SaqAI	TTAA	6 cut(s)	1125, 1151, 1167, 1370, 1382, 1416
Sau3AI	GATC	5 cut(s)	219, 396, 437, 639, 825
Sau96I	GGNCC	8 cut(s)	73, 276, 286, 295, 300, 408, 487, 1344
SchI	GAGTC	1 cut(s)	509
ScrFI	CCNGG	8 cut(s)	274, 298, 368, 369, 557, 635, 1145, 1348
SduI	GDGCHC	2 cut(s)	345, 351
SfaNI	GCATC	6 cut(s)	260, 552, 766, 1328, 1341, 1440
SfcI	CTRYAG	3 cut(s)	1113, 1286, 1314
Sfr274I	CTCGAG	1 cut(s)	344
Sfr303I	CCGCGG	1 cut(s)	511
SgrBI	CCGCGG	1 cut(s)	511
SinI	GGWCC	6 cut(s)	73, 286, 300, 408, 487, 1344
SlaI	CTCGAG	1 cut(s)	344
SmaI	CCCGGG	1 cut(s)	369
SmiMI	CAYNNNNRTG	1 cut(s)	1097
SmlI	CTYRAG	3 cut(s)	311, 344, 1049
SmoI	CTYRAG	3 cut(s)	311, 344, 1049
Sse9I	AATT	4 cut(s)	30, 656, 1016, 1190
SseBI	AGGCCT	1 cut(s)	1451
SspI	AATATT	1 cut(s)	1329
SspMI	CTAG	4 cut(s)	977, 1088, 1131, 1461
SstI	GAGCTC	2 cut(s)	345, 351
StuI	AGGCCT	1 cut(s)	1451
StyD4I	CCNGG	8 cut(s)	272, 296, 366, 367, 555, 633, 1143, 1346
StyI	CCWWGG	2 cut(s)	19, 801
TaaI	ACNGT	6 cut(s)	90, 269, 451, 1165, 1220, 1255
TaiI	ACGT	3 cut(s)	380, 474, 482
TaqI	TCGA	9 cut(s)	78, 195, 234, 345, 353, 570, 582, 719, 1071
TaqII	GACCGA	1 cut(s)	1248
TasI	AATT	4 cut(s)	30, 656, 1016, 1190
TauI	GCSGC	6 cut(s)	131, 134, 457, 460, 599, 629
TfiI	GAWTC	5 cut(s)	47, 65, 236, 281, 1073
Tru1I	TTAA	6 cut(s)	1125, 1151, 1167, 1370, 1382, 1416
Tru9I	TTAA	6 cut(s)	1125, 1151, 1167, 1370, 1382, 1416
TscAI	CASTG	2 cut(s)	1099, 1260
TseFI	GTSAC	2 cut(s)	475, 957
TseI	GCWGC	7 cut(s)	688, 745, 788, 793, 1118, 1313, 1316
Tsp45I	GTSAC	2 cut(s)	475, 957
TspDTI	ATGAA	5 cut(s)	508, 1115, 1203, 1257, 1440
TspGWI	ACGGA	2 cut(s)	450, 1070
TspMI	CCCGGG	1 cut(s)	367
TspRI	CASTG	2 cut(s)	1099, 1260
VpaK11BI	GGWCC	6 cut(s)	73, 286, 300, 408, 487, 1344
XapI	RAATTY	2 cut(s)	30, 1190
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1193
XhoI	CTCGAG	1 cut(s)	344
XmaI	CCCGGG	1 cut(s)	367
XspI	CTAG	4 cut(s)	977, 1088, 1131, 1461
ZraI	GACGTC	1 cut(s)	378
Zsp2I	ATGCAT	1 cut(s)	1433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.