Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0013716

Physical Location & Seq

Genomic Coordinates Reverse (-)

6991317 .. 6995045

Gene Structure 3729 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00285840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGATGAGGCAGGAAAACCATGGCGACGAAATTTCCGACCTCCGCGAATCCCAAGACGAGATGGAATCTCTGGTCCTCGACGAGCCACAACCGTCATCATCCAACGGCCAGTCTTCTCCCTCCTCCTCCGCTGCCGCACCACCATCAGCCGTCATGGACTGCCAGACTTCTGCCTCGCAACACTTCAACTCCATCCTCGAACCGCCGTCCTACGCTGACGCGATCTTCACATCGTTCGATTCCTCCGCCTCCGCATCCAACGGCCACGACAGTCCCAGGCCCGAATCGGACCCTCTGGCCCGGTCCGAGTTCCTCAAGGTATGGGTCTCCGACCCGCAGAAGGAACTCGAGCTCTCGAACTCGCTTGTCCCCGGCGGGACGTCGTACTACACCTACTTGATCACAACGCGGACCAATATGCCGGAGTACGGCGGGGACGGATCGGAGTTCACGGTGCGGCGGCGGTTCAAGGACGTGGTGACGTTATCGGACCGGTTGTCCGAGTCGTACCGCGGGTTCTTCATCCCAATCCGACCCGATAAGAGCGTGGTGGAGAGCCAGGTGATGCAAATCGAGCAGTTCGTCGAGCAGAGAAGGGCGGCGTTGAGTAAGTACCTGAACAAGCTCGCGGCGCACCCGGCGATCAGGAGGAGCGAGGAATTGAGAGTGTTTTTGGTTGTGAAAGGGAAGCTGCCGTTGATGAGGAGTGTGGATGTGGCGTCGAGGATGTTGGATGGGGCCGTGAGGCTGCCGAGGCAGTTGGTTGGTGAGGCGGTGGATGCGAACGAGGCGGCGCAGCCAGCCAAGGGCGGGAGAGACTTGATGAGGATCTTCAGGGAGTTGAAGCAGTCTGTGGTGAATGACTGGGGAGGTGTGAAGCCAATGGTGGCTGAGGAGGATAAGGAGTTCTTGGAGAAGAAGGAGAAGGTGCTGGAGTTTGAGCAACAGCTTAGCAATATGTCACAGCAGGACAGAATGGGAATGGTATTGGGGTATTCTAACTTCTTGAGTTGTATGATGGTATTGATTTTCATCGTGAATCTTTCTCCTACTCGAGCTTTGCAGGCTGAGTTGCTAGTAAAAGCTCAGCAAGATATGGGAGAGACTATGGGGGAATTGGGTTTGGCATTTGTGAAGCTGACCAAGCTTGAGACAGAAGGAGCCATGTTCGAATCTCAAACAACACAAGCCACTGACATGAAAAATGTGGCTACAGCAGCTGTTAAATCTAGCCGATTGTACCGGGAGTTAAATGCACAAACTGTTAAACATTTGGATAAACTCCATGAATATCTTGGAGTAATGTTAGCAGTCAACGGTGCGTTTTCAGACCGAACAAGCGCTTTATTAACAGTGCAAACTCTTTCATCAGACTTGGTTTCCCTGCAGTCAAGGATTGAGAAGCTTGAAGCTGCAGCATCCAAAATATTTGGTGGAGACAGGTCCAGGATGAGGAAAATAGAGGAGTTAAAAGAAACCTTAAAAGTTAGTGAGGAAGCCAAAGCTTGTGCAGTTAAAGAGTATGAACGCATCAAGGAAAATAACAGGAATGAACTTGAAAGGCTTGATAGAGAGAGACATGACGACTTTATGGGAATGTTGAAAGGATTTGTTCTTAATCAGGCAGGATATGCAGAAAAGATGGCAAATGCATGGGAGAAGCTTGCGGAAGAAACCAGTGGGTACGCAAAAGATGGCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005794 GO:0005802 GO:0005829 GO:0006807 GO:0006810 GO:0006897 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008289 GO:0009791 GO:0009987 GO:0010008 GO:0010467 GO:0012505 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019538 GO:0019898 GO:0030904 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032585 GO:0032588 GO:0032991 GO:0035091 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048856 GO:0051179 GO:0051234 GO:0051604 GO:0071704 GO:0071840 GO:0090351 GO:0097708 GO:0098588 GO:0098657 GO:0098791 GO:0098796 GO:0098805 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

PX Vps5

Protein Analysis

567

Amino Acids

63.33

Weight (kDa)

5.31

Isoelectric Point (pI)

46.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PX	PF00787	145 - 226	1.3e-16	PX domain
Vps5	PF09325	357 - 557	4.2e-13	Vps5 C terminal like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013716)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g25340 FvH4_7g25340 FvH4_7g25340
malus_domestica	MD01G1159500.v1.1 MD07G1228000.v1.1
prunus_persica	Prupe.2G257500_v2.0.a1
pyrus_communis	pycom01g17580 pycom07g20640
rosa_chinensis	RchiOBHm_Chr1g0371251
rosa_laevigata	RLG00000026976
rosa_roxburghii	Rroxscaffold_4G00285840
rosa_rugosa	Rorug01G0362400 Rorug01G0362400
rosa_samantha	Rh1AG372500 Rh1BG336000 Rh1CG349400 Rh1DG367100
rosa_wichuraiana	Rw1G032760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	383
AccII	CGCG	5 cut(s)	45, 221, 409, 513, 629
AclWI	GGATC	2 cut(s)	448, 836
AcoI	YGGCCR	2 cut(s)	106, 262
AcsI	RAATTY	1 cut(s)	30
AcuI	CTGAAG	1 cut(s)	817
AcyI	GRCGYC	2 cut(s)	380, 719
AfaI	GTAC	6 cut(s)	386, 428, 509, 614, 1241, 1685
AfeI	AGCGCT	1 cut(s)	1342
AfiI	CCNNNNNNNGG	5 cut(s)	340, 428, 806, 810, 1452
AgeI	ACCGGT	1 cut(s)	492
AgsI	TTSAA	6 cut(s)	187, 469, 844, 1409, 1559, 1603
AhdI	GACNNNNNGTC	1 cut(s)	496
AjiI	CACGTC	1 cut(s)	475
AjnI	CCWGG	3 cut(s)	275, 558, 1445
AloI	GAACNNNNNNTCC	2 cut(s)	890, 922
Alw21I	GWGCWC	1 cut(s)	354
Alw26I	GTCTC	6 cut(s)	331, 810, 1097, 1145, 1431, 1570
AlwI	GGATC	2 cut(s)	448, 836
AlwNI	CAGNNNCTG	1 cut(s)	1220
Ama87I	CYCGRG	2 cut(s)	347, 1053
Aor51HI	AGCGCT	1 cut(s)	1342
AoxI	GGCC	5 cut(s)	106, 262, 278, 297, 738
ApeKI	GCWGC	8 cut(s)	131, 691, 748, 796, 1217, 1412, 1415, 1698
ApoI	RAATTY	1 cut(s)	30
AsiGI	ACCGGT	1 cut(s)	492
AspLEI	GCGC	3 cut(s)	634, 796, 1343
AspS9I	GGNCC	9 cut(s)	73, 279, 289, 298, 303, 411, 490, 738, 1443
AsuC2I	CCSGG	4 cut(s)	301, 372, 638, 1244
AsuHPI	GGTGA	4 cut(s)	490, 574, 779, 868
AsuII	TTCGAA	1 cut(s)	1170
AvaI	CYCGRG	2 cut(s)	347, 1053
AvaII	GGWCC	6 cut(s)	73, 289, 303, 411, 490, 1443
BanII	GRGCYC	1 cut(s)	354
BarI	GAAGNNNNNNTAC	2 cut(s)	986, 1018
BbsI	GAAGAC	1 cut(s)	105
Bbv12I	GWGCWC	1 cut(s)	354
BbvCI	CCTCAGC	1 cut(s)	891
BbvI	GCAGC	7 cut(s)	118, 678, 735, 808, 1229, 1399, 1427
BccI	CCATC	7 cut(s)	55, 151, 200, 728, 1012, 1636, 1688
BceAI	ACGGC	7 cut(s)	121, 134, 190, 277, 445, 679, 725
BciT130I	CCWGG	3 cut(s)	277, 560, 1447
BclI	TGATCA	1 cut(s)	399
BcnI	CCSGG	4 cut(s)	301, 372, 638, 1244
BcoDI	GTCTC	6 cut(s)	331, 810, 1097, 1145, 1431, 1570
BfaI	CTAG	2 cut(s)	1076, 1230
BfmI	CTRYAG	3 cut(s)	1212, 1385, 1413
BfoI	RGCGCY	1 cut(s)	1344
BlpI	GCTNAGC	2 cut(s)	950, 1086
Bme1390I	CCNGG	7 cut(s)	277, 301, 372, 560, 638, 1244, 1447
Bme18I	GGWCC	6 cut(s)	73, 289, 303, 411, 490, 1443
BmeRI	GACNNNNNGTC	1 cut(s)	496
BmeT110I	CYCGRG	2 cut(s)	347, 1053
BmgBI	CACGTC	1 cut(s)	475
BmgT120I	GGNCC	9 cut(s)	73, 279, 289, 298, 303, 411, 490, 738, 1443
BmiI	GGNNCC	3 cut(s)	291, 739, 1162
BmrFI	CCNGG	7 cut(s)	277, 301, 372, 560, 638, 1244, 1447
BmrI	ACTGGG	1 cut(s)	874
BmsI	GCATC	5 cut(s)	263, 555, 769, 1427, 1539
BmuI	ACTGGG	1 cut(s)	874
BpiI	GAAGAC	1 cut(s)	105
BpmI	CTGGAG	1 cut(s)	953
Bpu10I	CCTNAGC	1 cut(s)	891
Bpu1102I	GCTNAGC	2 cut(s)	950, 1086
Bpu14I	TTCGAA	1 cut(s)	1170
BpuEI	CTTGAG	3 cut(s)	299, 1027, 1169
BpuMI	CCSGG	4 cut(s)	301, 372, 638, 1244
BsaBI	GATNNNNATC	3 cut(s)	569, 827, 1031
BsaHI	GRCGYC	2 cut(s)	380, 719
BsaI	GGTCTC	1 cut(s)	331
BsaJI	CCNNGG	6 cut(s)	19, 275, 370, 511, 752, 804
BsaWI	WCCGGW	1 cut(s)	492
BsaXI	ACNNNNNCTCC	2 cut(s)	173, 203
Bsc4I	CCNNNNNNNGG	5 cut(s)	340, 428, 806, 810, 1452
Bse118I	RCCGGY	1 cut(s)	492
Bse1I	ACTGG	3 cut(s)	109, 869, 1677
Bse8I	GATNNNNATC	3 cut(s)	569, 827, 1031
BseBI	CCWGG	3 cut(s)	277, 560, 1447
BseDI	CCNNGG	6 cut(s)	19, 275, 370, 511, 752, 804
BseJI	GATNNNNATC	3 cut(s)	569, 827, 1031
BseLI	CCNNNNNNNGG	5 cut(s)	340, 428, 806, 810, 1452
BseMII	CTCAG	3 cut(s)	882, 1059, 1100
BseNI	ACTGG	3 cut(s)	109, 869, 1677
BseRI	GAGGAG	6 cut(s)	112, 115, 664, 718, 908, 1478
BseXI	GCAGC	7 cut(s)	118, 678, 735, 808, 1229, 1399, 1427
BsgI	GTGCAG	1 cut(s)	1530
Bsh1236I	CGCG	5 cut(s)	45, 221, 409, 513, 629
BshFI	GGCC	5 cut(s)	108, 264, 280, 299, 740
BshTI	ACCGGT	1 cut(s)	492
BsiHKAI	GWGCWC	1 cut(s)	354
BsiHKCI	CYCGRG	2 cut(s)	347, 1053
BsiSI	CCGG	6 cut(s)	301, 372, 422, 493, 638, 1243
BslFI	GGGAC	4 cut(s)	258, 353, 391, 449
BslI	CCNNNNNNNGG	5 cut(s)	340, 428, 806, 810, 1452
BsmAI	GTCTC	6 cut(s)	331, 810, 1097, 1145, 1431, 1570
BsmFI	GGGAC	4 cut(s)	258, 353, 391, 449
BsnI	GGCC	5 cut(s)	108, 264, 280, 299, 740
Bso31I	GGTCTC	1 cut(s)	331
BsoBI	CYCGRG	2 cut(s)	347, 1053
Bsp119I	TTCGAA	1 cut(s)	1170
Bsp1286I	GDGCHC	1 cut(s)	354
Bsp143I	GATC	5 cut(s)	222, 399, 440, 642, 828
Bsp1720I	GCTNAGC	2 cut(s)	950, 1086
Bsp19I	CCATGG	1 cut(s)	19
BspANI	GGCC	5 cut(s)	108, 264, 280, 299, 740
BspCNI	CTCAG	3 cut(s)	883, 1060, 1099
BspFNI	CGCG	5 cut(s)	45, 221, 409, 513, 629
BspLI	GGNNCC	3 cut(s)	291, 739, 1162
BspMAI	CTGCAG	2 cut(s)	1389, 1417
BspPI	GGATC	2 cut(s)	448, 836
BspT104I	TTCGAA	1 cut(s)	1170
BspTNI	GGTCTC	1 cut(s)	331
BsrFI	RCCGGY	1 cut(s)	492
BsrI	ACTGG	3 cut(s)	109, 869, 1677
BssAI	RCCGGY	1 cut(s)	492
BssECI	CCNNGG	6 cut(s)	19, 275, 370, 511, 752, 804
BssMI	GATC	5 cut(s)	222, 399, 440, 642, 828
BssNI	GRCGYC	2 cut(s)	380, 719
BssT1I	CCWWGG	2 cut(s)	19, 804
Bst2UI	CCWGG	3 cut(s)	277, 560, 1447
Bst4CI	ACNGT	6 cut(s)	93, 272, 454, 1264, 1319, 1354
BstACI	GRCGYC	2 cut(s)	380, 719
BstAPI	GCANNNNNTGC	1 cut(s)	1631
BstBI	TTCGAA	1 cut(s)	1170
BstC8I	GCNNGC	4 cut(s)	627, 801, 1065, 1665
BstDEI	CTNAG	4 cut(s)	891, 950, 1068, 1086
BstDSI	CCRYGG	2 cut(s)	19, 511
BstFNI	CGCG	5 cut(s)	45, 221, 409, 513, 629
BstH2I	RGCGCY	1 cut(s)	1344
BstHHI	GCGC	3 cut(s)	634, 796, 1343
BstKTI	GATC	5 cut(s)	225, 402, 443, 645, 831
BstMAI	GTCTC	6 cut(s)	331, 810, 1097, 1145, 1431, 1570
BstMBI	GATC	5 cut(s)	222, 399, 440, 642, 828
BstNI	CCWGG	3 cut(s)	277, 560, 1447
BstSCI	CCNGG	7 cut(s)	275, 299, 370, 558, 636, 1242, 1445
BstSFI	CTRYAG	3 cut(s)	1212, 1385, 1413
BstUI	CGCG	5 cut(s)	45, 221, 409, 513, 629
BstV1I	GCAGC	7 cut(s)	118, 678, 735, 808, 1229, 1399, 1427
BstV2I	GAAGAC	1 cut(s)	105
BstX2I	RGATCY	1 cut(s)	828
BstYI	RGATCY	1 cut(s)	828
BsuRI	GGCC	5 cut(s)	108, 264, 280, 299, 740
BtgI	CCRYGG	2 cut(s)	19, 511
BtrI	CACGTC	1 cut(s)	475
BtsIMutI	CAGTG	3 cut(s)	1191, 1359, 1684
Cac8I	GCNNGC	4 cut(s)	627, 801, 1065, 1665
CaiI	CAGNNNCTG	1 cut(s)	1220
CfoI	GCGC	3 cut(s)	634, 796, 1343
Cfr10I	RCCGGY	1 cut(s)	492
Cfr13I	GGNCC	9 cut(s)	73, 279, 289, 298, 303, 411, 490, 738, 1443
Cfr42I	CCGCGG	1 cut(s)	514
CpoI	CGGWCCG	2 cut(s)	303, 490
CseI	GACGC	2 cut(s)	227, 708
Csp6I	GTAC	6 cut(s)	385, 427, 508, 613, 1240, 1684
CspAI	ACCGGT	1 cut(s)	492
CspI	CGGWCCG	2 cut(s)	303, 490
CviAII	CATG	7 cut(s)	20, 154, 1165, 1198, 1286, 1580, 1653
CviQI	GTAC	6 cut(s)	385, 427, 508, 613, 1240, 1684
DdeI	CTNAG	4 cut(s)	891, 950, 1068, 1086
DpnI	GATC	5 cut(s)	224, 401, 442, 644, 830
DpnII	GATC	5 cut(s)	222, 399, 440, 642, 828
DriI	GACNNNNNGTC	1 cut(s)	496
EaeI	YGGCCR	2 cut(s)	106, 262
Eam1105I	GACNNNNNGTC	1 cut(s)	496
EciI	GGCGGA	1 cut(s)	235
Ecl136II	GAGCTC	1 cut(s)	352
Eco130I	CCWWGG	2 cut(s)	19, 804
Eco24I	GRGCYC	1 cut(s)	354
Eco31I	GGTCTC	1 cut(s)	331
Eco47I	GGWCC	6 cut(s)	73, 289, 303, 411, 490, 1443
Eco47III	AGCGCT	1 cut(s)	1342
Eco53kI	GAGCTC	1 cut(s)	352
Eco57I	CTGAAG	1 cut(s)	817
Eco88I	CYCGRG	2 cut(s)	347, 1053
EcoICRI	GAGCTC	1 cut(s)	352
EcoRII	CCWGG	3 cut(s)	275, 558, 1445
EcoT14I	CCWWGG	2 cut(s)	19, 804
EcoT22I	ATGCAT	1 cut(s)	1654
EcoT38I	GRGCYC	1 cut(s)	354
ErhI	CCWWGG	2 cut(s)	19, 804
FaeI	CATG	7 cut(s)	23, 157, 1168, 1201, 1289, 1583, 1656
FalI	AAGNNNNNCTT	2 cut(s)	893, 925
FaqI	GGGAC	4 cut(s)	258, 353, 391, 449
FatI	CATG	7 cut(s)	19, 153, 1164, 1197, 1285, 1579, 1652
FauI	CCCGC	5 cut(s)	342, 368, 425, 506, 803
FbaI	TGATCA	1 cut(s)	399
FriOI	GRGCYC	1 cut(s)	354
FspBI	CTAG	2 cut(s)	1076, 1230
GlaI	GCGC	3 cut(s)	633, 795, 1342
GsuI	CTGGAG	1 cut(s)	953
HaeII	RGCGCY	1 cut(s)	1344
HaeIII	GGCC	5 cut(s)	108, 264, 280, 299, 740
HapII	CCGG	6 cut(s)	301, 372, 422, 493, 638, 1243
HgaI	GACGC	2 cut(s)	227, 708
HhaI	GCGC	3 cut(s)	634, 796, 1343
Hin1I	GRCGYC	2 cut(s)	380, 719
Hin1II	CATG	7 cut(s)	23, 157, 1168, 1201, 1289, 1583, 1656
Hin6I	GCGC	3 cut(s)	632, 794, 1341
HinP1I	GCGC	3 cut(s)	632, 794, 1341
HincII	GTYRAC	1 cut(s)	1315
HindII	GTYRAC	1 cut(s)	1315
HindIII	AAGCTT	4 cut(s)	1145, 1403, 1503, 1661
HinfI	GANTC	7 cut(s)	47, 65, 239, 284, 503, 1039, 1172
HpaII	CCGG	6 cut(s)	301, 372, 422, 493, 638, 1243
HphI	GGTGA	4 cut(s)	490, 574, 779, 868
Hpy166II	GTNNAC	2 cut(s)	450, 1315
Hpy188III	TCNNGA	4 cut(s)	355, 646, 1006, 1036
Hpy8I	GTNNAC	2 cut(s)	450, 1315
Hpy99I	CGWCG	5 cut(s)	29, 83, 385, 587, 724
HpyAV	CCTTC	5 cut(s)	334, 588, 913, 919, 1151
HpyCH4III	ACNGT	6 cut(s)	93, 272, 454, 1264, 1319, 1354
HpyCH4IV	ACGT	3 cut(s)	380, 474, 482
HpyCH4V	TGCA	9 cut(s)	568, 1063, 1256, 1357, 1387, 1415, 1511, 1634, 1652
HpyF3I	CTNAG	4 cut(s)	891, 950, 1068, 1086
HpySE526I	ACGT	3 cut(s)	380, 474, 482
Hsp92I	GRCGYC	2 cut(s)	380, 719
Hsp92II	CATG	7 cut(s)	23, 157, 1168, 1201, 1289, 1583, 1656
HspAI	GCGC	3 cut(s)	632, 794, 1341
Ksp22I	TGATCA	1 cut(s)	399
KspI	CCGCGG	1 cut(s)	514
Kzo9I	GATC	5 cut(s)	222, 399, 440, 642, 828
LmnI	GCTCC	2 cut(s)	651, 1160
Lsp1109I	GCAGC	7 cut(s)	118, 678, 735, 808, 1229, 1399, 1427
LweI	GCATC	5 cut(s)	263, 555, 769, 1427, 1539
MaeI	CTAG	2 cut(s)	1076, 1230
MaeII	ACGT	3 cut(s)	380, 474, 482
MaeIII	GTNAC	2 cut(s)	478, 960
MalI	GATC	5 cut(s)	224, 401, 442, 644, 830
MboI	GATC	5 cut(s)	222, 399, 440, 642, 828
MboII	GAAGA	6 cut(s)	105, 217, 511, 823, 928, 1682
MflI	RGATCY	1 cut(s)	828
MhlI	GDGCHC	1 cut(s)	354
MluCI	AATT	3 cut(s)	30, 659, 1115
MlyI	GAGTC	1 cut(s)	512
MmeI	TCCRAC	6 cut(s)	60, 126, 282, 354, 556, 711
Mph1103I	ATGCAT	1 cut(s)	1654
MseI	TTAA	8 cut(s)	1224, 1250, 1266, 1349, 1469, 1481, 1515, 1617
MslI	CAYNNNNRTG	1 cut(s)	1196
MspA1I	CMGCKG	4 cut(s)	131, 513, 1220, 1701
MspI	CCGG	6 cut(s)	301, 372, 422, 493, 638, 1243
MspR9I	CCNGG	7 cut(s)	277, 301, 372, 560, 638, 1244, 1447
MvaI	CCWGG	3 cut(s)	277, 560, 1447
MvnI	CGCG	5 cut(s)	45, 221, 409, 513, 629
NciI	CCSGG	4 cut(s)	301, 372, 638, 1244
NcoI	CCATGG	1 cut(s)	19
NdeII	GATC	5 cut(s)	222, 399, 440, 642, 828
NlaIII	CATG	7 cut(s)	23, 157, 1168, 1201, 1289, 1583, 1656
NlaIV	GGNNCC	3 cut(s)	291, 739, 1162
NmeAIII	GCCGAG	1 cut(s)	777
NmuCI	GTSAC	2 cut(s)	478, 960
NsiI	ATGCAT	1 cut(s)	1654
NspV	TTCGAA	1 cut(s)	1170
PaeR7I	CTCGAG	2 cut(s)	347, 1053
PcsI	WCGNNNNNNNCGW	2 cut(s)	33, 579
PfeI	GAWTC	6 cut(s)	47, 65, 239, 284, 1039, 1172
PfoI	TCCNGGA	1 cut(s)	1445
PinAI	ACCGGT	1 cut(s)	492
PleI	GAGTC	1 cut(s)	511
PpsI	GAGTC	1 cut(s)	511
Psp124BI	GAGCTC	1 cut(s)	354
Psp6I	CCWGG	3 cut(s)	275, 558, 1445
PspGI	CCWGG	3 cut(s)	275, 558, 1445
PspN4I	GGNNCC	3 cut(s)	291, 739, 1162
PspPI	GGNCC	9 cut(s)	73, 279, 289, 298, 303, 411, 490, 738, 1443
PspXI	VCTCGAGB	2 cut(s)	347, 1053
PsrI	GAACNNNNNNTAC	2 cut(s)	500, 532
PstI	CTGCAG	2 cut(s)	1389, 1417
PstNI	CAGNNNCTG	1 cut(s)	1220
PsuI	RGATCY	1 cut(s)	828
PvuII	CAGCTG	2 cut(s)	1220, 1701
RsaI	GTAC	6 cut(s)	386, 428, 509, 614, 1241, 1685
RsaNI	GTAC	6 cut(s)	385, 427, 508, 613, 1240, 1684
RseI	CAYNNNNRTG	1 cut(s)	1196
Rsr2I	CGGWCCG	2 cut(s)	303, 490
RsrII	CGGWCCG	2 cut(s)	303, 490
SacI	GAGCTC	1 cut(s)	354
SacII	CCGCGG	1 cut(s)	514
SaqAI	TTAA	8 cut(s)	1224, 1250, 1266, 1349, 1469, 1481, 1515, 1617
Sau3AI	GATC	5 cut(s)	222, 399, 440, 642, 828
Sau96I	GGNCC	9 cut(s)	73, 279, 289, 298, 303, 411, 490, 738, 1443
SchI	GAGTC	1 cut(s)	512
ScrFI	CCNGG	7 cut(s)	277, 301, 372, 560, 638, 1244, 1447
SduI	GDGCHC	1 cut(s)	354
SfaNI	GCATC	5 cut(s)	263, 555, 769, 1427, 1539
SfcI	CTRYAG	3 cut(s)	1212, 1385, 1413
Sfr274I	CTCGAG	2 cut(s)	347, 1053
Sfr303I	CCGCGG	1 cut(s)	514
SfuI	TTCGAA	1 cut(s)	1170
SgrBI	CCGCGG	1 cut(s)	514
SinI	GGWCC	6 cut(s)	73, 289, 303, 411, 490, 1443
SlaI	CTCGAG	2 cut(s)	347, 1053
SmiMI	CAYNNNNRTG	1 cut(s)	1196
SmlI	CTYRAG	5 cut(s)	314, 347, 1006, 1053, 1148
SmoI	CTYRAG	5 cut(s)	314, 347, 1006, 1053, 1148
Sse9I	AATT	3 cut(s)	30, 659, 1115
SspI	AATATT	1 cut(s)	1428
SspMI	CTAG	2 cut(s)	1076, 1230
SstI	GAGCTC	1 cut(s)	354
StyD4I	CCNGG	7 cut(s)	275, 299, 370, 558, 636, 1242, 1445
StyI	CCWWGG	2 cut(s)	19, 804
TaaI	ACNGT	6 cut(s)	93, 272, 454, 1264, 1319, 1354
TaiI	ACGT	3 cut(s)	383, 477, 485
TaqII	GACCGA	1 cut(s)	1347
TasI	AATT	3 cut(s)	30, 659, 1115
TauI	GCSGC	6 cut(s)	137, 460, 463, 602, 632, 794
TfiI	GAWTC	6 cut(s)	47, 65, 239, 284, 1039, 1172
Tru1I	TTAA	8 cut(s)	1224, 1250, 1266, 1349, 1469, 1481, 1515, 1617
Tru9I	TTAA	8 cut(s)	1224, 1250, 1266, 1349, 1469, 1481, 1515, 1617
TscAI	CASTG	3 cut(s)	1198, 1359, 1684
TseFI	GTSAC	2 cut(s)	478, 960
TseI	GCWGC	8 cut(s)	131, 691, 748, 796, 1217, 1412, 1415, 1698
Tsp45I	GTSAC	2 cut(s)	478, 960
TspDTI	ATGAA	7 cut(s)	511, 1021, 1214, 1302, 1356, 1539, 1566
TspGWI	ACGGA	1 cut(s)	453
TspRI	CASTG	3 cut(s)	1198, 1359, 1684
VpaK11BI	GGWCC	6 cut(s)	73, 289, 303, 411, 490, 1443
XapI	RAATTY	1 cut(s)	30
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1292
XhoI	CTCGAG	2 cut(s)	347, 1053
XspI	CTAG	2 cut(s)	1076, 1230
ZraI	GACGTC	1 cut(s)	381
Zsp2I	ATGCAT	1 cut(s)	1654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.