RchiOBHm_Chr1g0376341

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0015307
Physical Location & Seq
Forward (+)
63559630 .. 63564936
5307 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1878 bp
ATGTTCCTCTGGGAATTCCCATTTCACCATTTCTGTCCACTTTTGAAGTTTCTCTCAGAATCTCTCAGCTTCATTAACCTTCAACTCGCTCAAAATGAAATCTTTATAGTTGATACAAGCAGTACTATGCATTCTCTGAAATGGGTTCTCTTGGATTTGATTGGTAAATGCAAAACCTTGAGTTGCTTCAAGCAAATCCATGCAAAGACTGTAACTTCAGGCCTGGCTTGCAATGAATTGGTTGCCACCAATGTTGTTAACTTCTTGGGAAAATCTGTTACCCATTTCGATTACGCTTGTGATTTTCTGAAACAAGTTGATTGGCGTGTGAACTCTTTTCCGTTTAACATGTTGATCTCTGGCTATGCTAATGGTGAAAATGCAGGGGAGGCGGTTTTGGTTTATAGAAGGATAGTTAGAGATGGGTTTATGCCTGATATGTTTACTATTCCGGCGGTTTTGAAATCTTGTGTTAAGTTTTTGGGGATGGGAGAGGGTAGACAGGTCCATGGTGTGGTTGTGAAGATGGGTTTTCAGTGGGATGTGTATGTTCAGAACTCGCTTGTGCATTTCTATAGTGTTTGTGGTGATTGTGGTAGTGCTAGTAAGGTGTTTGATGAAATGCGTGTGAGGGATGTGGTGTCTTGGACTGGTTTGGTGTCCGGGCATGTGAAGGCAGGGTTGTTTGGTGAGGCTGTGTCTTTGTTTTTGAGGATGGATGTGAAGCCGAATGTGGCGACTTTTGTTAGTGTGGTTGTGGCTTGCGGGCGGATGGGGTATTTGAATGTGGGGAAGGGGGTTCATGGATTGATTTTGAAGCATTCGTTGGGGATGGACTTGGTGGTGGGCAATGCTGTTGTGGATATGTATGTTAAGTGTGAGAGTTTGTGCGAGGCAAAGCGGGTTTTTGATGAGCTTCCCGAAAGGGACATTGTGTCTTGGACTAGCTTGATAAGTGGATACGTGCAGTGTAAACGTCCGAGGGAGTCACTAGATTTGTTTTGCAGCATGCAGACTATGGGAATAGAGCCTGATAAGATTATACTTTCCAGTGTGCTTTCAGCTTGTGCCAGTCTTGGGGCTCTTGATTATGGTAGATGGGTCCATGAGTATATTGATCGTAAGGGTATCAAATGGGACGTACATATTGGAACAGCTATGATTGACATGTATTCCAAGTGTGGCTGTATAAATATGGCATTGCGTACTTTCAGTGAATTGCCTTGCGGGAATGTCTCTACTTGGAATGCACTGCTAGGTGGTTTAGCCATGCATGGACATGGGCACGAGGCACTCAAAAAGTTTGAAGAAATGACTAGGTCTGGCATCAGGCCAAATGCAGTTACTTTTCTAGCTGTATTGACAGCTTGCTGCCATTCTGGTTTGATTGATGAAGGCCGCGGGTACTTTCATCAGATGATAAGTACACCTCATAATCTCTCTCCAAGATTAGAACACTATGGATGCATGGTTGATCTGCTCTGTCGGGCTGGACTCCTCGTTGAAGCTCAGAAATTGATAAACACTATGCCAATGCAACCTGATGTGCTGATATTGGGAGCTCTTCTAAGTGCTTGCAAGGCCAAAAATGATGCTGAGCTCTCTCAAGAAATATTAGACCGTCTCCTGCAACTTGAGTGGCAAGATAGTGGGGTTTATGTGCTTCTATCAAACATTTTTGCTGCTAATAAAAGATGGGCTGATGCGACAAGGATAAGGAGGTTGATGAAAAAGAGAGGTATACAGAAGGCCCCTGGCTCAAGTGTCATAGAGGTGGACGGTAAGGCTCACGAATTTTTGGTTGGGGATACTAGCCACCCTCAGAATGAGGATATACATGTAGTGTTAGACATCCTTGCTAATACAAGCCAATCTTAA

Protein Analysis

625

Amino Acids

69.42

Weight (kDa)

6.88

Isoelectric Point (pI)

35.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 309 - 357 9.8e-09 PPR repeat family
PPR PF01535 312 - 342 3.2e-07 PPR repeat
PPR_2 PF13041 411 - 459 5.2e-13 PPR repeat family
PPR_3 PF13812 411 - 457 9.4e-06 Pentatricopeptide repeat domain
PPR PF01535 413 - 443 6.3e-06 PPR repeat
E_motif PF20431 530 - 591 3.3e-18 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015307)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38010
fragaria_vesca FvH4_7g28780
malus_domestica MD01G1194200.v1.1
prunus_persica Prupe.2G288100_v2.0.a1
pyrus_communis pycom01g20450 pycom07g24000
rosa_chinensis RchiOBHm_Chr1g0376341
rosa_laevigata RLG00000026610
rosa_multiflora Rmu_sc0005594.1_g000021 Rmu_sc0016074.1_g000004 Rmu_sc0028960.1_g000001
rosa_roxburghii Rroxscaffold_4G00282190
rosa_rugosa Rorug01G0395700
rosa_samantha Rh1BG370800 Rh1CG383600
rosa_wichuraiana Rw1G036110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 514
AccI GTMKAC 2 cut(s) 499, 1741
AccII CGCG 1 cut(s) 1401
AciI CCGC 8 cut(s) 392, 455, 765, 769, 901, 1227, 1399, 1401
AcsI RAATTY 2 cut(s) 14, 1793
AcuI CTGAAG 1 cut(s) 201
AfaI GTAC 5 cut(s) 124, 1143, 1207, 1406, 1426
AfiI CCNNNNNNNGG 2 cut(s) 514, 1077
AflIII ACRYGT 3 cut(s) 348, 1167, 1837
AgsI TTSAA 8 cut(s) 46, 83, 190, 463, 784, 817, 1307, 1505
AhdI GACNNNNNGTC 1 cut(s) 934
AjnI CCWGG 2 cut(s) 222, 1753
AjuI GAANNNNNNNTTGG 4 cut(s) 809, 841, 1785, 1817
Alw21I GWGCWC 2 cut(s) 1564, 1602
Alw26I GTCTC 2 cut(s) 1240, 1628
AoxI GGCC 5 cut(s) 220, 1331, 1396, 1581, 1749
ApeKI GCWGC 3 cut(s) 1005, 1371, 1682
ApoI RAATTY 2 cut(s) 14, 1793
AspS9I GGNCC 3 cut(s) 505, 1102, 1750
AsuC2I CCSGG 1 cut(s) 664
AsuHPI GGTGA 4 cut(s) 17, 386, 599, 701
AvaII GGWCC 2 cut(s) 505, 1102
BaeGI GKGCMC 1 cut(s) 1287
BanII GRGCYC 3 cut(s) 1084, 1564, 1602
BauI CACGAG 1 cut(s) 1286
Bbv12I GWGCWC 2 cut(s) 1564, 1602
BbvI GCAGC 3 cut(s) 1017, 1358, 1669
BccI CCATC 8 cut(s) 416, 481, 520, 709, 766, 826, 1092, 1689
BciT130I CCWGG 2 cut(s) 224, 1755
BciVI GTATCC 2 cut(s) 953, 1801
BcnI CCSGG 1 cut(s) 664
BcoDI GTCTC 2 cut(s) 1240, 1628
BfaI CTAG 7 cut(s) 603, 945, 992, 1256, 1317, 1352, 1812
BfmI CTRYAG 1 cut(s) 574
BfuI GTATCC 2 cut(s) 953, 1801
BisI GCNGC 4 cut(s) 1006, 1372, 1399, 1683
BlpI GCTNAGC 1 cut(s) 1596
BlsI GCNGC 4 cut(s) 1007, 1373, 1400, 1684
BmcAI AGTACT 1 cut(s) 124
Bme1390I CCNGG 3 cut(s) 224, 664, 1755
Bme18I GGWCC 2 cut(s) 505, 1102
BmeRI GACNNNNNGTC 1 cut(s) 934
BmgT120I GGNCC 3 cut(s) 505, 1102, 1750
BmiI GGNNCC 2 cut(s) 1103, 1752
BmrFI CCNGG 3 cut(s) 224, 664, 1755
BmsI GCATC 4 cut(s) 1335, 1454, 1582, 1693
Bpu1102I GCTNAGC 1 cut(s) 1596
BpuEI CTTGAG 4 cut(s) 199, 1590, 1655, 1744
BpuMI CCSGG 1 cut(s) 664
BsaAI YACGTR 1 cut(s) 964
BsaJI CCNNGG 4 cut(s) 508, 980, 1399, 1753
Bsc4I CCNNNNNNNGG 2 cut(s) 514, 1077
Bse1I ACTGG 3 cut(s) 655, 1050, 1071
Bse3DI GCAATG 3 cut(s) 238, 856, 1199
BseBI CCWGG 2 cut(s) 224, 1755
BseDI CCNNGG 4 cut(s) 508, 980, 1399, 1753
BseGI GGATG 9 cut(s) 492, 547, 640, 720, 724, 777, 837, 1469, 1851
BseLI CCNNNNNNNGG 2 cut(s) 514, 1077
BseMI GCAATG 3 cut(s) 238, 856, 1199
BseMII CTCAG 5 cut(s) 69, 79, 1523, 1587, 1835
BseNI ACTGG 3 cut(s) 655, 1050, 1071
BseRI GAGGAG 1 cut(s) 1487
BseSI GKGCMC 1 cut(s) 1287
BseXI GCAGC 3 cut(s) 1017, 1358, 1669
BsgI GTGCAG 1 cut(s) 986
Bsh1236I CGCG 1 cut(s) 1401
BshFI GGCC 5 cut(s) 222, 1333, 1398, 1583, 1751
BsiHKAI GWGCWC 2 cut(s) 1564, 1602
BsiSI CCGG 2 cut(s) 452, 663
BslFI GGGAC 2 cut(s) 941, 1151
BslI CCNNNNNNNGG 2 cut(s) 514, 1077
BsmAI GTCTC 2 cut(s) 1240, 1628
BsmBI CGTCTC 1 cut(s) 1628
BsmFI GGGAC 2 cut(s) 941, 1151
BsmI GAATGC 3 cut(s) 130, 820, 1252
BsnI GGCC 5 cut(s) 222, 1333, 1398, 1583, 1751
Bsp1286I GDGCHC 4 cut(s) 1084, 1287, 1564, 1602
Bsp143I GATC 3 cut(s) 354, 1117, 1474
Bsp1720I GCTNAGC 1 cut(s) 1596
Bsp19I CCATGG 1 cut(s) 508
BspACI CCGC 8 cut(s) 392, 455, 765, 769, 901, 1227, 1399, 1401
BspANI GGCC 5 cut(s) 222, 1333, 1398, 1583, 1751
BspCNI CTCAG 5 cut(s) 68, 78, 1522, 1588, 1834
BspFNI CGCG 1 cut(s) 1401
BspLI GGNNCC 2 cut(s) 1103, 1752
BspQI GCTCTTC 1 cut(s) 1569
BsrDI GCAATG 3 cut(s) 238, 856, 1199
BsrI ACTGG 3 cut(s) 655, 1050, 1071
BssECI CCNNGG 4 cut(s) 508, 980, 1399, 1753
BssMI GATC 3 cut(s) 354, 1117, 1474
BssNAI GTATAC 1 cut(s) 1742
BssSI CACGAG 1 cut(s) 1286
BssT1I CCWWGG 1 cut(s) 508
Bst1107I GTATAC 1 cut(s) 1742
Bst2BI CACGAG 1 cut(s) 1286
Bst2UI CCWGG 2 cut(s) 224, 1755
Bst4CI ACNGT 3 cut(s) 211, 1622, 1781
Bst6I CTCTTC 1 cut(s) 1569
BstBAI YACGTR 1 cut(s) 964
BstC8I GCNNGC 6 cut(s) 229, 763, 767, 1010, 1369, 1576
BstDEI CTNAG 6 cut(s) 55, 65, 1509, 1568, 1596, 1821
BstDSI CCRYGG 2 cut(s) 508, 1399
BstF5I GGATG 9 cut(s) 492, 547, 640, 720, 724, 777, 837, 1469, 1851
BstFNI CGCG 1 cut(s) 1401
BstKTI GATC 3 cut(s) 357, 1120, 1477
BstMAI GTCTC 2 cut(s) 1240, 1628
BstMBI GATC 3 cut(s) 354, 1117, 1474
BstMWI GCNNNNNNNGC 3 cut(s) 228, 389, 1580
BstNI CCWGG 2 cut(s) 224, 1755
BstNSI RCATGY 5 cut(s) 352, 671, 1012, 1171, 1841
BstSCI CCNGG 3 cut(s) 222, 662, 1753
BstSFI CTRYAG 1 cut(s) 574
BstSLI GKGCMC 1 cut(s) 1287
BstUI CGCG 1 cut(s) 1401
BstV1I GCAGC 3 cut(s) 1017, 1358, 1669
BstZ17I GTATAC 1 cut(s) 1742
BsuI GTATCC 2 cut(s) 953, 1801
BsuRI GGCC 5 cut(s) 222, 1333, 1398, 1583, 1751
BtgI CCRYGG 2 cut(s) 508, 1399
BtsCI GGATG 9 cut(s) 492, 547, 640, 720, 724, 777, 837, 1469, 1851
BtsI GCAGTG 2 cut(s) 974, 1250
BtsIMutI CAGTG 5 cut(s) 542, 974, 1057, 1219, 1250
Cac8I GCNNGC 6 cut(s) 229, 763, 767, 1010, 1369, 1576
Cfr13I GGNCC 3 cut(s) 505, 1102, 1750
Cfr42I CCGCGG 1 cut(s) 1402
Csp6I GTAC 5 cut(s) 123, 1142, 1206, 1405, 1425
CspCI CAANNNNNGTGG 4 cut(s) 235, 270, 1619, 1654
CviQI GTAC 5 cut(s) 123, 1142, 1206, 1405, 1425
DdeI CTNAG 6 cut(s) 55, 65, 1509, 1568, 1596, 1821
DpnI GATC 3 cut(s) 356, 1119, 1476
DpnII GATC 3 cut(s) 354, 1117, 1474
DriI GACNNNNNGTC 1 cut(s) 934
Eam1104I CTCTTC 1 cut(s) 1569
Eam1105I GACNNNNNGTC 1 cut(s) 934
EarI CTCTTC 1 cut(s) 1569
EciI GGCGGA 1 cut(s) 784
Ecl136II GAGCTC 2 cut(s) 1562, 1600
Eco130I CCWWGG 1 cut(s) 508
Eco147I AGGCCT 1 cut(s) 222
Eco24I GRGCYC 3 cut(s) 1084, 1564, 1602
Eco47I GGWCC 2 cut(s) 505, 1102
Eco53kI GAGCTC 2 cut(s) 1562, 1600
Eco57I CTGAAG 1 cut(s) 201
EcoICRI GAGCTC 2 cut(s) 1562, 1600
EcoO109I RGGNCCY 1 cut(s) 1750
EcoRI GAATTC 1 cut(s) 14
EcoRII CCWGG 2 cut(s) 222, 1753
EcoT14I CCWWGG 1 cut(s) 508
EcoT22I ATGCAT 3 cut(s) 132, 1275, 1469
EcoT38I GRGCYC 3 cut(s) 1084, 1564, 1602
ErhI CCWWGG 1 cut(s) 508
Esp3I CGTCTC 1 cut(s) 1628
FalI AAGNNNNNCTT 1 cut(s) 1858
FaqI GGGAC 2 cut(s) 941, 1151
FauI CCCGC 4 cut(s) 758, 894, 1220, 1394
FblI GTMKAC 2 cut(s) 499, 1741
Fnu4HI GCNGC 4 cut(s) 1006, 1372, 1399, 1683
FokI GGATG 9 cut(s) 499, 554, 647, 727, 731, 784, 844, 1476, 1838
FriOI GRGCYC 3 cut(s) 1084, 1564, 1602
Fsp4HI GCNGC 4 cut(s) 1006, 1372, 1399, 1683
FspBI CTAG 7 cut(s) 603, 945, 992, 1256, 1317, 1352, 1812
GluI GCNGC 4 cut(s) 1006, 1372, 1399, 1683
HaeIII GGCC 5 cut(s) 222, 1333, 1398, 1583, 1751
HapII CCGG 2 cut(s) 452, 663
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HinfI GANTC 3 cut(s) 59, 986, 1494
HpaI GTTAAC 1 cut(s) 259
HpaII CCGG 2 cut(s) 452, 663
HphI GGTGA 4 cut(s) 17, 386, 599, 701
Hpy166II GTNNAC 9 cut(s) 38, 259, 331, 444, 500, 974, 1427, 1742, 1777
Hpy188I TCNGA 8 cut(s) 58, 138, 309, 555, 981, 1416, 1512, 1824
Hpy188III TCNNGA 4 cut(s) 920, 1085, 1607, 1790
Hpy8I GTNNAC 9 cut(s) 38, 259, 331, 444, 500, 974, 1427, 1742, 1777
HpyAV CCTTC 6 cut(s) 89, 402, 667, 787, 1388, 1741
HpyCH4III ACNGT 3 cut(s) 211, 1622, 1781
HpyCH4IV ACGT 3 cut(s) 963, 976, 1140
HpyF10VI GCNNNNNNNGC 3 cut(s) 228, 389, 1580
HpyF3I CTNAG 6 cut(s) 55, 65, 1509, 1568, 1596, 1821
HpySE526I ACGT 3 cut(s) 963, 976, 1140
KspAI GTTAAC 1 cut(s) 259
KspI CCGCGG 1 cut(s) 1402
Kzo9I GATC 3 cut(s) 354, 1117, 1474
LguI GCTCTTC 1 cut(s) 1569
LmnI GCTCC 1 cut(s) 1559
Lsp1109I GCAGC 3 cut(s) 1017, 1358, 1669
LweI GCATC 4 cut(s) 1335, 1454, 1582, 1693
MaeI CTAG 7 cut(s) 603, 945, 992, 1256, 1317, 1352, 1812
MaeII ACGT 3 cut(s) 963, 976, 1140
MaeIII GTNAC 4 cut(s) 211, 277, 987, 1342
MalI GATC 3 cut(s) 356, 1119, 1476
MboI GATC 3 cut(s) 354, 1117, 1474
MboII GAAGA 3 cut(s) 535, 1319, 1556
MhlI GDGCHC 4 cut(s) 1084, 1287, 1564, 1602
MluCI AATT 5 cut(s) 14, 236, 1217, 1514, 1793
MlyI GAGTC 2 cut(s) 995, 1488
Mph1103I ATGCAT 3 cut(s) 132, 1275, 1469
MseI TTAA 6 cut(s) 75, 258, 345, 474, 873, 1876
MslI CAYNNNNRTG 2 cut(s) 1278, 1772
MspA1I CMGCKG 1 cut(s) 1401
MspI CCGG 2 cut(s) 452, 663
MspR9I CCNGG 3 cut(s) 224, 664, 1755
Mva1269I GAATGC 3 cut(s) 130, 820, 1252
MvaI CCWGG 2 cut(s) 224, 1755
MvnI CGCG 1 cut(s) 1401
MwoI GCNNNNNNNGC 3 cut(s) 228, 389, 1580
NciI CCSGG 1 cut(s) 664
NcoI CCATGG 1 cut(s) 508
NdeII GATC 3 cut(s) 354, 1117, 1474
NlaIV GGNNCC 2 cut(s) 1103, 1752
NmuCI GTSAC 1 cut(s) 987
NsiI ATGCAT 3 cut(s) 132, 1275, 1469
NspI RCATGY 5 cut(s) 352, 671, 1012, 1171, 1841
PaeI GCATGC 1 cut(s) 1012
PceI AGGCCT 1 cut(s) 222
PciI ACATGT 3 cut(s) 348, 1167, 1837
PciSI GCTCTTC 1 cut(s) 1569
PctI GAATGC 3 cut(s) 130, 820, 1252
PfeI GAWTC 1 cut(s) 59
PflFI GACNNNGTC 1 cut(s) 1318
PflMI CCANNNNNTGG 1 cut(s) 514
PkrI GCNGC 4 cut(s) 1007, 1373, 1400, 1684
PleI GAGTC 2 cut(s) 994, 1488
PpsI GAGTC 2 cut(s) 994, 1488
Ppu21I YACGTR 1 cut(s) 964
PscI ACATGT 3 cut(s) 348, 1167, 1837
Psp124BI GAGCTC 2 cut(s) 1564, 1602
Psp6I CCWGG 2 cut(s) 222, 1753
PspGI CCWGG 2 cut(s) 222, 1753
PspN4I GGNNCC 2 cut(s) 1103, 1752
PspPI GGNCC 3 cut(s) 505, 1102, 1750
PsyI GACNNNGTC 1 cut(s) 1318
RsaI GTAC 5 cut(s) 124, 1143, 1207, 1406, 1426
RsaNI GTAC 5 cut(s) 123, 1142, 1206, 1405, 1425
RseI CAYNNNNRTG 2 cut(s) 1278, 1772
SacI GAGCTC 2 cut(s) 1564, 1602
SacII CCGCGG 1 cut(s) 1402
SapI GCTCTTC 1 cut(s) 1569
SaqAI TTAA 6 cut(s) 75, 258, 345, 474, 873, 1876
SatI GCNGC 4 cut(s) 1006, 1372, 1399, 1683
Sau3AI GATC 3 cut(s) 354, 1117, 1474
Sau96I GGNCC 3 cut(s) 505, 1102, 1750
ScaI AGTACT 1 cut(s) 124
SchI GAGTC 2 cut(s) 995, 1488
ScrFI CCNGG 3 cut(s) 224, 664, 1755
SduI GDGCHC 4 cut(s) 1084, 1287, 1564, 1602
SfaNI GCATC 4 cut(s) 1335, 1454, 1582, 1693
SfcI CTRYAG 1 cut(s) 574
Sfr303I CCGCGG 1 cut(s) 1402
SgrBI CCGCGG 1 cut(s) 1402
SinI GGWCC 2 cut(s) 505, 1102
SmiMI CAYNNNNRTG 2 cut(s) 1278, 1772
SmlI CTYRAG 4 cut(s) 178, 1605, 1634, 1759
SmoI CTYRAG 4 cut(s) 178, 1605, 1634, 1759
SphI GCATGC 1 cut(s) 1012
Sse9I AATT 5 cut(s) 14, 236, 1217, 1514, 1793
SseBI AGGCCT 1 cut(s) 222
SsiI CCGC 8 cut(s) 392, 455, 765, 769, 901, 1227, 1399, 1401
SspI AATATT 1 cut(s) 1614
SspMI CTAG 7 cut(s) 603, 945, 992, 1256, 1317, 1352, 1812
SstI GAGCTC 2 cut(s) 1564, 1602
StuI AGGCCT 1 cut(s) 222
StyD4I CCNGG 3 cut(s) 222, 662, 1753
StyI CCWWGG 1 cut(s) 508
TaaI ACNGT 3 cut(s) 211, 1622, 1781
TaiI ACGT 3 cut(s) 966, 979, 1143
TaqI TCGA 1 cut(s) 288
TasI AATT 5 cut(s) 14, 236, 1217, 1514, 1793
TatI WGTACW 2 cut(s) 122, 1424
TauI GCSGC 1 cut(s) 1401
TfiI GAWTC 1 cut(s) 59
Tru1I TTAA 6 cut(s) 75, 258, 345, 474, 873, 1876
Tru9I TTAA 6 cut(s) 75, 258, 345, 474, 873, 1876
TscAI CASTG 5 cut(s) 542, 974, 1057, 1219, 1257
TseFI GTSAC 1 cut(s) 987
TseI GCWGC 3 cut(s) 1005, 1371, 1682
Tsp45I GTSAC 1 cut(s) 987
TspDTI ATGAA 8 cut(s) 61, 111, 249, 633, 791, 1400, 1407, 1742
TspGWI ACGGA 1 cut(s) 330
TspRI CASTG 5 cut(s) 542, 974, 1057, 1219, 1257
Tth111I GACNNNGTC 1 cut(s) 1318
Van91I CCANNNNNTGG 1 cut(s) 514
VpaK11BI GGWCC 2 cut(s) 505, 1102
XapI RAATTY 2 cut(s) 14, 1793
XceI RCATGY 5 cut(s) 352, 671, 1012, 1171, 1841
XmiI GTMKAC 2 cut(s) 499, 1741
XspI CTAG 7 cut(s) 603, 945, 992, 1256, 1317, 1352, 1812
ZrmI AGTACT 1 cut(s) 124
Zsp2I ATGCAT 3 cut(s) 132, 1275, 1469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.