DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0323151 |
| rosa_laevigata | RLG00000019405 |
| rosa_multiflora | Rmu_sc0009428.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00012700 Rroxscaffold_2G00079930 Rroxscaffold_5G00371700 Rroxscaffold_6G00412040 |
| rosa_samantha | Rh5DG225900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 143 |
| AccIII | TCCGGA | 1 cut(s) | 229 |
| AcuI | CTGAAG | 2 cut(s) | 41, 44 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 143 |
| AgsI | TTSAA | 5 cut(s) | 40, 152, 165, 173, 200 |
| AluBI | AGCT | 1 cut(s) | 30 |
| AluI | AGCT | 1 cut(s) | 30 |
| Aor13HI | TCCGGA | 1 cut(s) | 229 |
| AspS9I | GGNCC | 1 cut(s) | 80 |
| AvaII | GGWCC | 1 cut(s) | 80 |
| BccI | CCATC | 1 cut(s) | 140 |
| BciVI | GTATCC | 1 cut(s) | 9 |
| BclI | TGATCA | 1 cut(s) | 103 |
| BfaI | CTAG | 1 cut(s) | 66 |
| BfuI | GTATCC | 1 cut(s) | 9 |
| Bme18I | GGWCC | 1 cut(s) | 80 |
| BmgT120I | GGNCC | 1 cut(s) | 80 |
| BmrI | ACTGGG | 1 cut(s) | 21 |
| BmsI | GCATC | 1 cut(s) | 145 |
| BmuI | ACTGGG | 1 cut(s) | 21 |
| BpmI | CTGGAG | 2 cut(s) | 195, 231 |
| BpuEI | CTTGAG | 1 cut(s) | 52 |
| BsaBI | GATNNNNATC | 1 cut(s) | 73 |
| BsaWI | WCCGGW | 1 cut(s) | 229 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 143 |
| Bse1I | ACTGG | 1 cut(s) | 16 |
| Bse8I | GATNNNNATC | 1 cut(s) | 73 |
| BseAI | TCCGGA | 1 cut(s) | 229 |
| BseGI | GGATG | 1 cut(s) | 132 |
| BseJI | GATNNNNATC | 1 cut(s) | 73 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 143 |
| BseNI | ACTGG | 1 cut(s) | 16 |
| BseRI | GAGGAG | 2 cut(s) | 170, 234 |
| BsiSI | CCGG | 1 cut(s) | 230 |
| BslFI | GGGAC | 1 cut(s) | 70 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 143 |
| BsmFI | GGGAC | 1 cut(s) | 70 |
| Bsp13I | TCCGGA | 1 cut(s) | 229 |
| Bsp143I | GATC | 2 cut(s) | 68, 103 |
| BspEI | TCCGGA | 1 cut(s) | 229 |
| BsrI | ACTGG | 1 cut(s) | 16 |
| BssMI | GATC | 2 cut(s) | 68, 103 |
| Bst4CI | ACNGT | 2 cut(s) | 84, 255 |
| Bst6I | CTCTTC | 1 cut(s) | 231 |
| BstF5I | GGATG | 1 cut(s) | 132 |
| BstKTI | GATC | 2 cut(s) | 71, 106 |
| BstMBI | GATC | 2 cut(s) | 68, 103 |
| BsuI | GTATCC | 1 cut(s) | 9 |
| BtsCI | GGATG | 1 cut(s) | 132 |
| Cfr13I | GGNCC | 1 cut(s) | 80 |
| CviAII | CATG | 2 cut(s) | 143, 261 |
| CviJI | RGCY | 2 cut(s) | 30, 65 |
| CviKI_1 | RGCY | 2 cut(s) | 30, 65 |
| DpnI | GATC | 2 cut(s) | 70, 105 |
| DpnII | GATC | 2 cut(s) | 68, 103 |
| Eam1104I | CTCTTC | 1 cut(s) | 231 |
| EarI | CTCTTC | 1 cut(s) | 231 |
| Eco47I | GGWCC | 1 cut(s) | 80 |
| Eco57I | CTGAAG | 2 cut(s) | 41, 44 |
| FaeI | CATG | 2 cut(s) | 146, 264 |
| FaiI | YATR | 6 cut(s) | 119, 144, 187, 189, 238, 262 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 14, 46 |
| FaqI | GGGAC | 1 cut(s) | 70 |
| FatI | CATG | 2 cut(s) | 142, 260 |
| FbaI | TGATCA | 1 cut(s) | 103 |
| FokI | GGATG | 1 cut(s) | 119 |
| FspBI | CTAG | 1 cut(s) | 66 |
| GsuI | CTGGAG | 2 cut(s) | 195, 231 |
| HapII | CCGG | 1 cut(s) | 230 |
| Hin1II | CATG | 2 cut(s) | 146, 264 |
| HincII | GTYRAC | 1 cut(s) | 9 |
| HindII | GTYRAC | 1 cut(s) | 9 |
| HinfI | GANTC | 1 cut(s) | 161 |
| HpaII | CCGG | 1 cut(s) | 230 |
| Hpy166II | GTNNAC | 1 cut(s) | 9 |
| Hpy188I | TCNGA | 1 cut(s) | 103 |
| Hpy188III | TCNNGA | 6 cut(s) | 78, 170, 197, 212, 230, 248 |
| Hpy8I | GTNNAC | 1 cut(s) | 9 |
| HpyCH4III | ACNGT | 2 cut(s) | 84, 255 |
| HpyCH4V | TGCA | 1 cut(s) | 158 |
| Hsp92II | CATG | 2 cut(s) | 146, 264 |
| Kpn2I | TCCGGA | 1 cut(s) | 229 |
| Ksp22I | TGATCA | 1 cut(s) | 103 |
| Kzo9I | GATC | 2 cut(s) | 68, 103 |
| LpnPI | CCDG | 6 cut(s) | 47, 63, 150, 225, 243, 261 |
| LweI | GCATC | 1 cut(s) | 145 |
| MaeI | CTAG | 1 cut(s) | 66 |
| MalI | GATC | 2 cut(s) | 70, 105 |
| MboI | GATC | 2 cut(s) | 68, 103 |
| MboII | GAAGA | 5 cut(s) | 34, 47, 50, 164, 218 |
| MluCI | AATT | 1 cut(s) | 165 |
| MnlI | CCTC | 4 cut(s) | 188, 191, 219, 255 |
| MroI | TCCGGA | 1 cut(s) | 229 |
| MspI | CCGG | 1 cut(s) | 230 |
| NdeII | GATC | 2 cut(s) | 68, 103 |
| NlaIII | CATG | 2 cut(s) | 146, 264 |
| PfeI | GAWTC | 1 cut(s) | 161 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 143 |
| PspPI | GGNCC | 1 cut(s) | 80 |
| Sau3AI | GATC | 2 cut(s) | 68, 103 |
| Sau96I | GGNCC | 1 cut(s) | 80 |
| SetI | ASST | 1 cut(s) | 32 |
| SfaNI | GCATC | 1 cut(s) | 145 |
| SinI | GGWCC | 1 cut(s) | 80 |
| SmlI | CTYRAG | 1 cut(s) | 31 |
| SmoI | CTYRAG | 1 cut(s) | 31 |
| Sse9I | AATT | 1 cut(s) | 165 |
| SspMI | CTAG | 1 cut(s) | 66 |
| TaaI | ACNGT | 2 cut(s) | 84, 255 |
| TasI | AATT | 1 cut(s) | 165 |
| TfiI | GAWTC | 1 cut(s) | 161 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 143 |
| VpaK11BI | GGWCC | 1 cut(s) | 80 |
| XspI | CTAG | 1 cut(s) | 66 |