DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0323151 |
| rosa_laevigata | RLG00000019405 |
| rosa_multiflora | Rmu_sc0009428.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00012700 Rroxscaffold_2G00079930 Rroxscaffold_5G00371700 Rroxscaffold_6G00412040 |
| rosa_samantha | Rh5DG225900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 76, 277 |
| AcuI | CTGAAG | 2 cut(s) | 72, 81 |
| AcyI | GRCGYC | 1 cut(s) | 231 |
| AgsI | TTSAA | 3 cut(s) | 74, 240, 275 |
| AjnI | CCWGG | 1 cut(s) | 133 |
| AluBI | AGCT | 5 cut(s) | 61, 101, 126, 206, 284 |
| AluI | AGCT | 5 cut(s) | 61, 101, 126, 206, 284 |
| Alw21I | GWGCWC | 2 cut(s) | 128, 271 |
| ApoI | RAATTY | 2 cut(s) | 76, 277 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 252 |
| AspS9I | GGNCC | 1 cut(s) | 137 |
| AsuHPI | GGTGA | 1 cut(s) | 233 |
| AvaII | GGWCC | 1 cut(s) | 137 |
| BanII | GRGCYC | 2 cut(s) | 113, 128 |
| BbsI | GAAGAC | 1 cut(s) | 234 |
| Bbv12I | GWGCWC | 2 cut(s) | 128, 271 |
| BciT130I | CCWGG | 1 cut(s) | 135 |
| BciVI | GTATCC | 1 cut(s) | 40 |
| BfuI | GTATCC | 1 cut(s) | 40 |
| Bme1390I | CCNGG | 1 cut(s) | 135 |
| Bme18I | GGWCC | 1 cut(s) | 137 |
| BmgT120I | GGNCC | 1 cut(s) | 137 |
| BmrFI | CCNGG | 1 cut(s) | 135 |
| BmrI | ACTGGG | 1 cut(s) | 52 |
| BmuI | ACTGGG | 1 cut(s) | 52 |
| BpiI | GAAGAC | 1 cut(s) | 234 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 110, 142, 115, 147 |
| BpmI | CTGGAG | 2 cut(s) | 117, 270 |
| Bsa29I | ATCGAT | 1 cut(s) | 358 |
| BsaHI | GRCGYC | 1 cut(s) | 231 |
| Bse1I | ACTGG | 1 cut(s) | 47 |
| BseBI | CCWGG | 1 cut(s) | 135 |
| BseCI | ATCGAT | 1 cut(s) | 358 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseNI | ACTGG | 1 cut(s) | 47 |
| BshVI | ATCGAT | 1 cut(s) | 358 |
| BsiHKAI | GWGCWC | 2 cut(s) | 128, 271 |
| Bsp1286I | GDGCHC | 3 cut(s) | 113, 128, 271 |
| BspDI | ATCGAT | 1 cut(s) | 358 |
| BsrI | ACTGG | 1 cut(s) | 47 |
| BssNI | GRCGYC | 1 cut(s) | 231 |
| Bst2UI | CCWGG | 1 cut(s) | 135 |
| Bst4CI | ACNGT | 1 cut(s) | 331 |
| BstACI | GRCGYC | 1 cut(s) | 231 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstNI | CCWGG | 1 cut(s) | 135 |
| BstSCI | CCNGG | 1 cut(s) | 133 |
| BstV2I | GAAGAC | 1 cut(s) | 234 |
| Bsu15I | ATCGAT | 1 cut(s) | 358 |
| BsuI | GTATCC | 1 cut(s) | 40 |
| BsuTUI | ATCGAT | 1 cut(s) | 358 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| BtsIMutI | CAGTG | 1 cut(s) | 336 |
| Cfr13I | GGNCC | 1 cut(s) | 137 |
| ClaI | ATCGAT | 1 cut(s) | 358 |
| CseI | GACGC | 1 cut(s) | 239 |
| CviAII | CATG | 2 cut(s) | 175, 218 |
| CviJI | RGCY | 7 cut(s) | 61, 101, 111, 126, 206, 252, 284 |
| CviKI_1 | RGCY | 7 cut(s) | 61, 101, 111, 126, 206, 252, 284 |
| Ecl136II | GAGCTC | 1 cut(s) | 126 |
| Eco24I | GRGCYC | 2 cut(s) | 113, 128 |
| Eco47I | GGWCC | 1 cut(s) | 137 |
| Eco53kI | GAGCTC | 1 cut(s) | 126 |
| Eco57I | CTGAAG | 2 cut(s) | 72, 81 |
| EcoICRI | GAGCTC | 1 cut(s) | 126 |
| EcoO109I | RGGNCCY | 1 cut(s) | 137 |
| EcoRII | CCWGG | 1 cut(s) | 133 |
| EcoT38I | GRGCYC | 2 cut(s) | 113, 128 |
| FaeI | CATG | 2 cut(s) | 178, 221 |
| FaiI | YATR | 4 cut(s) | 176, 219, 262, 264 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 45, 77 |
| FatI | CATG | 2 cut(s) | 174, 217 |
| FokI | GGATG | 1 cut(s) | 17 |
| FriOI | GRGCYC | 2 cut(s) | 113, 128 |
| GsuI | CTGGAG | 2 cut(s) | 117, 270 |
| HgaI | GACGC | 1 cut(s) | 239 |
| Hin1I | GRCGYC | 1 cut(s) | 231 |
| Hin1II | CATG | 2 cut(s) | 178, 221 |
| HincII | GTYRAC | 1 cut(s) | 40 |
| HindII | GTYRAC | 1 cut(s) | 40 |
| HinfI | GANTC | 3 cut(s) | 236, 296, 360 |
| HphI | GGTGA | 1 cut(s) | 233 |
| Hpy166II | GTNNAC | 1 cut(s) | 40 |
| Hpy188I | TCNGA | 1 cut(s) | 365 |
| Hpy188III | TCNNGA | 4 cut(s) | 212, 245, 272, 287 |
| Hpy8I | GTNNAC | 1 cut(s) | 40 |
| HpyAV | CCTTC | 2 cut(s) | 150, 263 |
| HpyCH4III | ACNGT | 1 cut(s) | 331 |
| Hsp92I | GRCGYC | 1 cut(s) | 231 |
| Hsp92II | CATG | 2 cut(s) | 178, 221 |
| LmnI | GCTCC | 2 cut(s) | 123, 289 |
| MboII | GAAGA | 5 cut(s) | 65, 81, 84, 87, 239 |
| MhlI | GDGCHC | 3 cut(s) | 113, 128, 271 |
| MluCI | AATT | 4 cut(s) | 76, 103, 240, 277 |
| MnlI | CCTC | 3 cut(s) | 112, 217, 349 |
| MroXI | GAANNNNTTC | 1 cut(s) | 252 |
| MspR9I | CCNGG | 1 cut(s) | 135 |
| MvaI | CCWGG | 1 cut(s) | 135 |
| NlaIII | CATG | 2 cut(s) | 178, 221 |
| PdmI | GAANNNNTTC | 1 cut(s) | 252 |
| PfeI | GAWTC | 3 cut(s) | 236, 296, 360 |
| PfoI | TCCNGGA | 1 cut(s) | 133 |
| PpuMI | RGGWCCY | 1 cut(s) | 137 |
| Psp124BI | GAGCTC | 1 cut(s) | 128 |
| Psp5II | RGGWCCY | 1 cut(s) | 137 |
| Psp6I | CCWGG | 1 cut(s) | 133 |
| PspGI | CCWGG | 1 cut(s) | 133 |
| PspPI | GGNCC | 1 cut(s) | 137 |
| PspPPI | RGGWCCY | 1 cut(s) | 137 |
| SacI | GAGCTC | 1 cut(s) | 128 |
| Sau96I | GGNCC | 1 cut(s) | 137 |
| ScrFI | CCNGG | 1 cut(s) | 135 |
| SduI | GDGCHC | 3 cut(s) | 113, 128, 271 |
| SetI | ASST | 6 cut(s) | 63, 103, 128, 142, 208, 286 |
| SinI | GGWCC | 1 cut(s) | 137 |
| Sse9I | AATT | 4 cut(s) | 76, 103, 240, 277 |
| SstI | GAGCTC | 1 cut(s) | 128 |
| StyD4I | CCNGG | 1 cut(s) | 133 |
| TaaI | ACNGT | 1 cut(s) | 331 |
| TaqI | TCGA | 1 cut(s) | 358 |
| TasI | AATT | 4 cut(s) | 76, 103, 240, 277 |
| TfiI | GAWTC | 3 cut(s) | 236, 296, 360 |
| TscAI | CASTG | 1 cut(s) | 336 |
| TspRI | CASTG | 1 cut(s) | 336 |
| VpaK11BI | GGWCC | 1 cut(s) | 137 |
| XapI | RAATTY | 2 cut(s) | 76, 277 |
| XmnI | GAANNNNTTC | 1 cut(s) | 252 |