resistance protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0342551 |
| rosa_laevigata | RLG00000029164 |
| rosa_multiflora | Rmu_ssc0000177.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00313100 Rroxscaffold_5G00371430 |
| rosa_rugosa | Rorug01G0147300.1 Rorug01G0149300.1 Rorug01G0149400.1 Rorug01G0149800.1 Rorug01G0149900.1 Rorug01G0150000.1 |
| rosa_samantha | Rh1AG165600 Rh1CG154200 Rh1DG166600 |
| rosa_wichuraiana | Rw1G013770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4971 |
| AatII | GACGTC | 2 cut(s) | 3201, 3408 |
| Acc36I | ACCTGC | 1 cut(s) | 3746 |
| AccB1I | GGYRCC | 1 cut(s) | 1390 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1723, 1883 |
| AccBSI | CCGCTC | 1 cut(s) | 3029 |
| AccI | GTMKAC | 3 cut(s) | 930, 2651, 5317 |
| AccII | CGCG | 2 cut(s) | 2743, 4315 |
| AccIII | TCCGGA | 6 cut(s) | 2305, 2548, 2708, 3886, 4117, 4274 |
| AciI | CCGC | 7 cut(s) | 771, 2181, 2741, 2906, 2972, 3027, 4475 |
| AclI | AACGTT | 1 cut(s) | 1243 |
| AcoI | YGGCCR | 3 cut(s) | 1874, 3767, 3803 |
| AcuI | CTGAAG | 5 cut(s) | 306, 378, 759, 3119, 4711 |
| AcvI | CACGTG | 1 cut(s) | 4310 |
| AcyI | GRCGYC | 4 cut(s) | 3017, 3198, 3405, 5064 |
| AflII | CTTAAG | 1 cut(s) | 1226 |
| AflIII | ACRYGT | 5 cut(s) | 163, 370, 2104, 2269, 2771 |
| AhlI | ACTAGT | 5 cut(s) | 128, 2063, 2095, 2260, 2530 |
| AjiI | CACGTC | 4 cut(s) | 533, 607, 2945, 3700 |
| AjnI | CCWGG | 8 cut(s) | 691, 807, 892, 933, 2611, 4180, 4222, 4375 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2328, 2360 |
| Alw21I | GWGCWC | 4 cut(s) | 348, 2749, 4460, 5061 |
| Alw26I | GTCTC | 8 cut(s) | 119, 1280, 2005, 2396, 3189, 3239, 4182, 4279 |
| Alw44I | GTGCAC | 2 cut(s) | 344, 2745 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1156 |
| Ama87I | CYCGRG | 1 cut(s) | 4519 |
| Aor13HI | TCCGGA | 6 cut(s) | 2305, 2548, 2708, 3886, 4117, 4274 |
| AoxI | GGCC | 6 cut(s) | 1874, 1987, 3767, 3803, 4548, 5069 |
| ApaLI | GTGCAC | 2 cut(s) | 344, 2745 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 476, 508, 3537, 3569 |
| AseI | ATTAAT | 1 cut(s) | 4107 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 294, 355, 1598, 2628, 3524 |
| AspA2I | CCTAGG | 1 cut(s) | 3211 |
| AspLEI | GCGC | 4 cut(s) | 4013, 4315, 4317, 4601 |
| AspS9I | GGNCC | 3 cut(s) | 330, 1898, 1988 |
| AsuC2I | CCSGG | 3 cut(s) | 1026, 4520, 4521 |
| AvaI | CYCGRG | 1 cut(s) | 4519 |
| AvaII | GGWCC | 2 cut(s) | 330, 1898 |
| AvrII | CCTAGG | 1 cut(s) | 3211 |
| BaeGI | GKGCMC | 5 cut(s) | 348, 1395, 1647, 2610, 2749 |
| BalI | TGGCCA | 2 cut(s) | 1876, 3805 |
| BamHI | GGATCC | 2 cut(s) | 2835, 4401 |
| BanI | GGYRCC | 1 cut(s) | 1390 |
| BanII | GRGCYC | 1 cut(s) | 5505 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 2517, 2526, 2549, 2558, 4932, 4964 |
| BbrPI | CACGTG | 1 cut(s) | 4310 |
| BbsI | GAAGAC | 6 cut(s) | 786, 3320, 4210, 4269, 4770, 5337 |
| Bbv12I | GWGCWC | 4 cut(s) | 348, 2749, 4460, 5061 |
| BceAI | ACGGC | 4 cut(s) | 3754, 3974, 4051, 5541 |
| BciT130I | CCWGG | 8 cut(s) | 693, 809, 894, 935, 2613, 4182, 4224, 4377 |
| BciVI | GTATCC | 1 cut(s) | 3654 |
| BclI | TGATCA | 7 cut(s) | 145, 2218, 2248, 2380, 3607, 4333, 5371 |
| BcnI | CCSGG | 3 cut(s) | 1026, 4520, 4521 |
| BcoDI | GTCTC | 8 cut(s) | 119, 1280, 2005, 2396, 3189, 3239, 4182, 4279 |
| BcuI | ACTAGT | 5 cut(s) | 128, 2063, 2095, 2260, 2530 |
| BfmI | CTRYAG | 3 cut(s) | 2040, 2658, 3238 |
| BfrI | CTTAAG | 1 cut(s) | 1226 |
| BfuAI | ACCTGC | 1 cut(s) | 3746 |
| BfuI | GTATCC | 1 cut(s) | 3654 |
| BglII | AGATCT | 1 cut(s) | 2857 |
| BlnI | CCTAGG | 1 cut(s) | 3211 |
| BmcAI | AGTACT | 4 cut(s) | 283, 2134, 2535, 3880 |
| Bme18I | GGWCC | 2 cut(s) | 330, 1898 |
| BmeT110I | CYCGRG | 1 cut(s) | 4519 |
| BmgBI | CACGTC | 4 cut(s) | 533, 607, 2945, 3700 |
| BmgT120I | GGNCC | 3 cut(s) | 330, 1898, 1988 |
| BmiI | GGNNCC | 7 cut(s) | 1392, 1899, 2837, 4403, 4617, 5197, 5355 |
| BmsI | GCATC | 5 cut(s) | 241, 1590, 1672, 3881, 4590 |
| BpiI | GAAGAC | 6 cut(s) | 786, 3320, 4210, 4269, 4770, 5337 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1696, 1728 |
| BpmI | CTGGAG | 5 cut(s) | 93, 1389, 2793, 3906, 4164 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4323 |
| BpuEI | CTTGAG | 6 cut(s) | 1172, 3015, 3229, 3500, 3676, 4573 |
| BpuMI | CCSGG | 3 cut(s) | 1026, 4520, 4521 |
| Bsa29I | ATCGAT | 1 cut(s) | 5032 |
| BsaAI | YACGTR | 4 cut(s) | 1642, 2772, 4310, 4863 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1317, 3222, 5160 |
| BsaHI | GRCGYC | 4 cut(s) | 3017, 3198, 3405, 5064 |
| BsaWI | WCCGGW | 6 cut(s) | 2305, 2548, 2708, 3886, 4117, 4274 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1317, 3222, 5160 |
| BseAI | TCCGGA | 6 cut(s) | 2305, 2548, 2708, 3886, 4117, 4274 |
| BseBI | CCWGG | 8 cut(s) | 693, 809, 894, 935, 2613, 4182, 4224, 4377 |
| BseCI | ATCGAT | 1 cut(s) | 5032 |
| BseGI | GGATG | 9 cut(s) | 1137, 1510, 2824, 3763, 3872, 4581, 4619, 4914, 5558 |
| BseJI | GATNNNNATC | 3 cut(s) | 1317, 3222, 5160 |
| BsePI | GCGCGC | 1 cut(s) | 4313 |
| BseRI | GAGGAG | 5 cut(s) | 1302, 1993, 2130, 3207, 5366 |
| BseSI | GKGCMC | 5 cut(s) | 348, 1395, 1647, 2610, 2749 |
| BseX3I | CGGCCG | 1 cut(s) | 3767 |
| BseYI | CCCAGC | 2 cut(s) | 517, 5200 |
| BsgI | GTGCAG | 2 cut(s) | 958, 2875 |
| Bsh1236I | CGCG | 2 cut(s) | 2743, 4315 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3770 |
| BshFI | GGCC | 6 cut(s) | 1876, 1989, 3769, 3805, 4550, 5071 |
| BshNI | GGYRCC | 1 cut(s) | 1390 |
| BshVI | ATCGAT | 1 cut(s) | 5032 |
| BsiEI | CGRYCG | 1 cut(s) | 3770 |
| BsiHKAI | GWGCWC | 4 cut(s) | 348, 2749, 4460, 5061 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4519 |
| BsiSI | CCGG | 8 cut(s) | 1025, 2306, 2549, 2709, 3887, 4118, 4275, 4520 |
| BslFI | GGGAC | 7 cut(s) | 617, 972, 1518, 1911, 2330, 3379, 4926 |
| BsmAI | GTCTC | 8 cut(s) | 119, 1280, 2005, 2396, 3189, 3239, 4182, 4279 |
| BsmBI | CGTCTC | 1 cut(s) | 3189 |
| BsmFI | GGGAC | 7 cut(s) | 617, 972, 1518, 1911, 2330, 3379, 4926 |
| BsmI | GAATGC | 2 cut(s) | 656, 3674 |
| BsnI | GGCC | 6 cut(s) | 1876, 1989, 3769, 3805, 4550, 5071 |
| BsoBI | CYCGRG | 1 cut(s) | 4519 |
| Bsp1286I | GDGCHC | 8 cut(s) | 348, 1395, 1647, 2610, 2749, 4460, 5061, 5505 |
| Bsp13I | TCCGGA | 6 cut(s) | 2305, 2548, 2708, 3886, 4117, 4274 |
| Bsp19I | CCATGG | 3 cut(s) | 2495, 5151, 5419 |
| BspACI | CCGC | 7 cut(s) | 771, 2181, 2741, 2906, 2972, 3027, 4475 |
| BspANI | GGCC | 6 cut(s) | 1876, 1989, 3769, 3805, 4550, 5071 |
| BspDI | ATCGAT | 1 cut(s) | 5032 |
| BspEI | TCCGGA | 6 cut(s) | 2305, 2548, 2708, 3886, 4117, 4274 |
| BspFNI | CGCG | 2 cut(s) | 2743, 4315 |
| BspHI | TCATGA | 1 cut(s) | 5362 |
| BspLI | GGNNCC | 7 cut(s) | 1392, 1899, 2837, 4403, 4617, 5197, 5355 |
| BspMAI | CTGCAG | 2 cut(s) | 2662, 3242 |
| BspMI | ACCTGC | 1 cut(s) | 3746 |
| BspQI | GCTCTTC | 2 cut(s) | 735, 5448 |
| BspT107I | GGYRCC | 1 cut(s) | 1390 |
| BspTI | CTTAAG | 1 cut(s) | 1226 |
| BsrBI | CCGCTC | 1 cut(s) | 3029 |
| BssHII | GCGCGC | 1 cut(s) | 4313 |
| BssNAI | GTATAC | 1 cut(s) | 931 |
| BssNI | GRCGYC | 4 cut(s) | 3017, 3198, 3405, 5064 |
| BssT1I | CCWWGG | 8 cut(s) | 746, 1141, 2495, 2695, 3211, 4960, 5151, 5419 |
| Bst1107I | GTATAC | 1 cut(s) | 931 |
| Bst2UI | CCWGG | 8 cut(s) | 693, 809, 894, 935, 2613, 4182, 4224, 4377 |
| Bst6I | CTCTTC | 7 cut(s) | 300, 567, 627, 735, 1673, 1845, 5448 |
| BstACI | GRCGYC | 4 cut(s) | 3017, 3198, 3405, 5064 |
| BstAFI | CTTAAG | 1 cut(s) | 1226 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 981, 1642, 2666, 5251 |
| BstBAI | YACGTR | 4 cut(s) | 1642, 2772, 4310, 4863 |
| BstC8I | GCNNGC | 9 cut(s) | 920, 2412, 2689, 2745, 3493, 3677, 4015, 4315, 4579 |
| BstDSI | CCRYGG | 5 cut(s) | 578, 2495, 4067, 5151, 5419 |
| BstF5I | GGATG | 9 cut(s) | 1137, 1510, 2824, 3763, 3872, 4581, 4619, 4914, 5558 |
| BstFNI | CGCG | 2 cut(s) | 2743, 4315 |
| BstHHI | GCGC | 4 cut(s) | 4013, 4315, 4317, 4601 |
| BstMAI | GTCTC | 8 cut(s) | 119, 1280, 2005, 2396, 3189, 3239, 4182, 4279 |
| BstMCI | CGRYCG | 1 cut(s) | 3770 |
| BstNI | CCWGG | 8 cut(s) | 693, 809, 894, 935, 2613, 4182, 4224, 4377 |
| BstSFI | CTRYAG | 3 cut(s) | 2040, 2658, 3238 |
| BstSLI | GKGCMC | 5 cut(s) | 348, 1395, 1647, 2610, 2749 |
| BstSNI | TACGTA | 1 cut(s) | 4863 |
| BstUI | CGCG | 2 cut(s) | 2743, 4315 |
| BstV2I | GAAGAC | 6 cut(s) | 786, 3320, 4210, 4269, 4770, 5337 |
| BstX2I | RGATCY | 3 cut(s) | 2835, 2857, 4401 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 699, 2516, 2763 |
| BstYI | RGATCY | 3 cut(s) | 2835, 2857, 4401 |
| BstZ17I | GTATAC | 1 cut(s) | 931 |
| BstZI | CGGCCG | 1 cut(s) | 3767 |
| Bsu15I | ATCGAT | 1 cut(s) | 5032 |
| BsuI | GTATCC | 1 cut(s) | 3654 |
| BsuRI | GGCC | 6 cut(s) | 1876, 1989, 3769, 3805, 4550, 5071 |
| BsuTUI | ATCGAT | 1 cut(s) | 5032 |
| BtgI | CCRYGG | 5 cut(s) | 578, 2495, 4067, 5151, 5419 |
| BtgZI | GCGATG | 2 cut(s) | 3966, 4756 |
| BtrI | CACGTC | 4 cut(s) | 533, 607, 2945, 3700 |
| BtsCI | GGATG | 9 cut(s) | 1137, 1510, 2824, 3763, 3872, 4581, 4619, 4914, 5558 |
| BtsI | GCAGTG | 4 cut(s) | 2251, 2887, 3464, 4334 |
| BveI | ACCTGC | 1 cut(s) | 3746 |
| Cac8I | GCNNGC | 9 cut(s) | 920, 2412, 2689, 2745, 3493, 3677, 4015, 4315, 4579 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1156 |
| CciI | TCATGA | 1 cut(s) | 5362 |
| CfoI | GCGC | 4 cut(s) | 4013, 4315, 4317, 4601 |
| Cfr13I | GGNCC | 3 cut(s) | 330, 1898, 1988 |
| Cfr9I | CCCGGG | 1 cut(s) | 4519 |
| ClaI | ATCGAT | 1 cut(s) | 5032 |
| CpoI | CGGWCCG | 1 cut(s) | 330 |
| CseI | GACGC | 4 cut(s) | 756, 3025, 3381, 5053 |
| CspI | CGGWCCG | 1 cut(s) | 330 |
| DraI | TTTAAA | 3 cut(s) | 586, 724, 1131 |
| EaeI | YGGCCR | 3 cut(s) | 1874, 3767, 3803 |
| EagI | CGGCCG | 1 cut(s) | 3767 |
| Eam1104I | CTCTTC | 7 cut(s) | 300, 567, 627, 735, 1673, 1845, 5448 |
| EarI | CTCTTC | 7 cut(s) | 300, 567, 627, 735, 1673, 1845, 5448 |
| EciI | GGCGGA | 2 cut(s) | 2895, 4464 |
| EclXI | CGGCCG | 1 cut(s) | 3767 |
| Eco105I | TACGTA | 1 cut(s) | 4863 |
| Eco130I | CCWWGG | 8 cut(s) | 746, 1141, 2495, 2695, 3211, 4960, 5151, 5419 |
| Eco24I | GRGCYC | 1 cut(s) | 5505 |
| Eco32I | GATATC | 1 cut(s) | 1828 |
| Eco47I | GGWCC | 2 cut(s) | 330, 1898 |
| Eco52I | CGGCCG | 1 cut(s) | 3767 |
| Eco57I | CTGAAG | 5 cut(s) | 306, 378, 759, 3119, 4711 |
| Eco72I | CACGTG | 1 cut(s) | 4310 |
| Eco88I | CYCGRG | 1 cut(s) | 4519 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1988 |
| EcoRI | GAATTC | 2 cut(s) | 1146, 3524 |
| EcoRII | CCWGG | 8 cut(s) | 691, 807, 892, 933, 2611, 4180, 4222, 4375 |
| EcoRV | GATATC | 1 cut(s) | 1828 |
| EcoT14I | CCWWGG | 8 cut(s) | 746, 1141, 2495, 2695, 3211, 4960, 5151, 5419 |
| EcoT22I | ATGCAT | 1 cut(s) | 656 |
| EcoT38I | GRGCYC | 1 cut(s) | 5505 |
| ErhI | CCWWGG | 8 cut(s) | 746, 1141, 2495, 2695, 3211, 4960, 5151, 5419 |
| Esp3I | CGTCTC | 1 cut(s) | 3189 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 279, 311, 1021, 1053, 5234, 5266 |
| FaqI | GGGAC | 7 cut(s) | 617, 972, 1518, 1911, 2330, 3379, 4926 |
| FauI | CCCGC | 1 cut(s) | 2188 |
| FauNDI | CATATG | 1 cut(s) | 4545 |
| FbaI | TGATCA | 7 cut(s) | 145, 2218, 2248, 2380, 3607, 4333, 5371 |
| FblI | GTMKAC | 3 cut(s) | 930, 2651, 5317 |
| FokI | GGATG | 8 cut(s) | 1124, 1497, 2831, 3770, 3859, 4568, 4606, 4921 |
| FriOI | GRGCYC | 1 cut(s) | 5505 |
| GlaI | GCGC | 4 cut(s) | 4012, 4314, 4316, 4600 |
| GsaI | CCCAGC | 2 cut(s) | 521, 5204 |
| GsuI | CTGGAG | 5 cut(s) | 93, 1389, 2793, 3906, 4164 |
| HaeIII | GGCC | 6 cut(s) | 1876, 1989, 3769, 3805, 4550, 5071 |
| HapII | CCGG | 8 cut(s) | 1025, 2306, 2549, 2709, 3887, 4118, 4275, 4520 |
| HgaI | GACGC | 4 cut(s) | 756, 3025, 3381, 5053 |
| HhaI | GCGC | 4 cut(s) | 4013, 4315, 4317, 4601 |
| Hin1I | GRCGYC | 4 cut(s) | 3017, 3198, 3405, 5064 |
| Hin6I | GCGC | 4 cut(s) | 4011, 4313, 4315, 4599 |
| HinP1I | GCGC | 4 cut(s) | 4011, 4313, 4315, 4599 |
| HincII | GTYRAC | 1 cut(s) | 5171 |
| HindII | GTYRAC | 1 cut(s) | 5171 |
| HindIII | AAGCTT | 4 cut(s) | 1097, 1229, 5178, 5398 |
| HpaII | CCGG | 8 cut(s) | 1025, 2306, 2549, 2709, 3887, 4118, 4275, 4520 |
| Hpy99I | CGWCG | 3 cut(s) | 537, 2721, 5169 |
| Hsp92I | GRCGYC | 4 cut(s) | 3017, 3198, 3405, 5064 |
| HspAI | GCGC | 4 cut(s) | 4011, 4313, 4315, 4599 |
| Kpn2I | TCCGGA | 6 cut(s) | 2305, 2548, 2708, 3886, 4117, 4274 |
| Ksp22I | TGATCA | 7 cut(s) | 145, 2218, 2248, 2380, 3607, 4333, 5371 |
| LguI | GCTCTTC | 2 cut(s) | 735, 5448 |
| LmnI | GCTCC | 5 cut(s) | 2308, 2483, 2520, 2696, 5353 |
| LweI | GCATC | 5 cut(s) | 241, 1590, 1672, 3881, 4590 |
| MbiI | CCGCTC | 1 cut(s) | 3029 |
| MfeI | CAATTG | 2 cut(s) | 473, 4903 |
| MflI | RGATCY | 3 cut(s) | 2835, 2857, 4401 |
| MhlI | GDGCHC | 8 cut(s) | 348, 1395, 1647, 2610, 2749, 4460, 5061, 5505 |
| MlsI | TGGCCA | 2 cut(s) | 1876, 3805 |
| MluNI | TGGCCA | 2 cut(s) | 1876, 3805 |
| MmeI | TCCRAC | 3 cut(s) | 2387, 2461, 4976 |
| Mox20I | TGGCCA | 2 cut(s) | 1876, 3805 |
| Mph1103I | ATGCAT | 1 cut(s) | 656 |
| MroI | TCCGGA | 6 cut(s) | 2305, 2548, 2708, 3886, 4117, 4274 |
| MroXI | GAANNNNTTC | 5 cut(s) | 294, 355, 1598, 2628, 3524 |
| MscI | TGGCCA | 2 cut(s) | 1876, 3805 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1052, 1887, 3816, 5367 |
| Msp20I | TGGCCA | 2 cut(s) | 1876, 3805 |
| MspA1I | CMGCKG | 4 cut(s) | 151, 773, 2045, 2254 |
| MspCI | CTTAAG | 1 cut(s) | 1226 |
| MspI | CCGG | 8 cut(s) | 1025, 2306, 2549, 2709, 3887, 4118, 4275, 4520 |
| MssI | GTTTAAAC | 1 cut(s) | 586 |
| MunI | CAATTG | 2 cut(s) | 473, 4903 |
| Mva1269I | GAATGC | 2 cut(s) | 656, 3674 |
| MvaI | CCWGG | 8 cut(s) | 693, 809, 894, 935, 2613, 4182, 4224, 4377 |
| MvnI | CGCG | 2 cut(s) | 2743, 4315 |
| NciI | CCSGG | 3 cut(s) | 1026, 4520, 4521 |
| NcoI | CCATGG | 3 cut(s) | 2495, 5151, 5419 |
| NdeI | CATATG | 1 cut(s) | 4545 |
| NlaIV | GGNNCC | 7 cut(s) | 1392, 1899, 2837, 4403, 4617, 5197, 5355 |
| NmeAIII | GCCGAG | 1 cut(s) | 5040 |
| NmuCI | GTSAC | 4 cut(s) | 1649, 3083, 4658, 4895 |
| NsiI | ATGCAT | 1 cut(s) | 656 |
| PaeI | GCATGC | 2 cut(s) | 922, 2691 |
| PagI | TCATGA | 1 cut(s) | 5362 |
| PauI | GCGCGC | 1 cut(s) | 4313 |
| PciI | ACATGT | 4 cut(s) | 163, 370, 2104, 2269 |
| PciSI | GCTCTTC | 2 cut(s) | 735, 5448 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 4600 |
| PctI | GAATGC | 2 cut(s) | 656, 3674 |
| PdmI | GAANNNNTTC | 5 cut(s) | 294, 355, 1598, 2628, 3524 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1723, 1883 |
| PmaCI | CACGTG | 1 cut(s) | 4310 |
| PmeI | GTTTAAAC | 1 cut(s) | 586 |
| PmlI | CACGTG | 1 cut(s) | 4310 |
| Ppu21I | YACGTR | 4 cut(s) | 1642, 2772, 4310, 4863 |
| PscI | ACATGT | 4 cut(s) | 163, 370, 2104, 2269 |
| PshBI | ATTAAT | 1 cut(s) | 4107 |
| PsiI | TTATAA | 1 cut(s) | 4971 |
| Psp1406I | AACGTT | 1 cut(s) | 1243 |
| Psp6I | CCWGG | 8 cut(s) | 691, 807, 892, 933, 2611, 4180, 4222, 4375 |
| PspCI | CACGTG | 1 cut(s) | 4310 |
| PspFI | CCCAGC | 2 cut(s) | 517, 5200 |
| PspGI | CCWGG | 8 cut(s) | 691, 807, 892, 933, 2611, 4180, 4222, 4375 |
| PspN4I | GGNNCC | 7 cut(s) | 1392, 1899, 2837, 4403, 4617, 5197, 5355 |
| PspPI | GGNCC | 3 cut(s) | 330, 1898, 1988 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4737, 4769 |
| PstI | CTGCAG | 2 cut(s) | 2662, 3242 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1156 |
| PsuI | RGATCY | 3 cut(s) | 2835, 2857, 4401 |
| PteI | GCGCGC | 1 cut(s) | 4313 |
| PvuII | CAGCTG | 3 cut(s) | 151, 2045, 2254 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1052, 1887, 3816, 5367 |
| Rsr2I | CGGWCCG | 1 cut(s) | 330 |
| RsrII | CGGWCCG | 1 cut(s) | 330 |
| SapI | GCTCTTC | 2 cut(s) | 735, 5448 |
| Sau96I | GGNCC | 3 cut(s) | 330, 1898, 1988 |
| ScaI | AGTACT | 4 cut(s) | 283, 2134, 2535, 3880 |
| SduI | GDGCHC | 8 cut(s) | 348, 1395, 1647, 2610, 2749, 4460, 5061, 5505 |
| SfaNI | GCATC | 5 cut(s) | 241, 1590, 1672, 3881, 4590 |
| SfcI | CTRYAG | 3 cut(s) | 2040, 2658, 3238 |
| SinI | GGWCC | 2 cut(s) | 330, 1898 |
| SmaI | CCCGGG | 1 cut(s) | 4521 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1052, 1887, 3816, 5367 |
| SmlI | CTYRAG | 7 cut(s) | 1187, 1226, 3030, 3244, 3515, 3655, 4552 |
| SmoI | CTYRAG | 7 cut(s) | 1187, 1226, 3030, 3244, 3515, 3655, 4552 |
| SnaBI | TACGTA | 1 cut(s) | 4863 |
| SpeI | ACTAGT | 5 cut(s) | 128, 2063, 2095, 2260, 2530 |
| SphI | GCATGC | 2 cut(s) | 922, 2691 |
| SsiI | CCGC | 7 cut(s) | 771, 2181, 2741, 2906, 2972, 3027, 4475 |
| SspI | AATATT | 2 cut(s) | 303, 3107 |
| StyI | CCWWGG | 8 cut(s) | 746, 1141, 2495, 2695, 3211, 4960, 5151, 5419 |
| TaqI | TCGA | 9 cut(s) | 49, 565, 802, 2425, 3503, 4704, 5032, 5341, 5548 |
| TaqII | GACCGA | 1 cut(s) | 318 |
| TatI | WGTACW | 9 cut(s) | 61, 281, 1729, 1907, 2132, 2533, 3878, 4234, 4939 |
| TseFI | GTSAC | 4 cut(s) | 1649, 3083, 4658, 4895 |
| Tsp45I | GTSAC | 4 cut(s) | 1649, 3083, 4658, 4895 |
| TspGWI | ACGGA | 8 cut(s) | 363, 1736, 2332, 2636, 3947, 4297, 4394, 4732 |
| TspMI | CCCGGG | 1 cut(s) | 4519 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1723, 1883 |
| Vha464I | CTTAAG | 1 cut(s) | 1226 |
| VneI | GTGCAC | 2 cut(s) | 344, 2745 |
| VpaK11BI | GGWCC | 2 cut(s) | 330, 1898 |
| VspI | ATTAAT | 1 cut(s) | 4107 |
| XbaI | TCTAGA | 1 cut(s) | 628 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 148, 2086, 4025 |
| XmaI | CCCGGG | 1 cut(s) | 4519 |
| XmaJI | CCTAGG | 1 cut(s) | 3211 |
| XmiI | GTMKAC | 3 cut(s) | 930, 2651, 5317 |
| XmnI | GAANNNNTTC | 5 cut(s) | 294, 355, 1598, 2628, 3524 |
| ZraI | GACGTC | 2 cut(s) | 3199, 3406 |
| ZrmI | AGTACT | 4 cut(s) | 283, 2134, 2535, 3880 |
| Zsp2I | ATGCAT | 1 cut(s) | 656 |