Cytochrome p450
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01280 |
| fragaria_vesca | FvH4_7g16710 |
| malus_domestica | MD01G1082400.v1.1 |
| prunus_persica | Prupe.2G189800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0359911 RchiOBHm_Chr1g0359941 RchiOBHm_Chr1g0359971 |
| rosa_laevigata | RLG00000027844 |
| rosa_multiflora | Rmu_sc0008215.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00296660 Rroxscaffold_4G00296670 Rroxscaffold_4G00296700 |
| rosa_rugosa | Rorug01G0273500 |
| rosa_samantha | Rh1AG287600 Rh1AG287800 Rh1AG288000 Rh1BG253400 Rh1CG270900 Rh1DG282200 |
| rosa_wichuraiana | Rw1G025550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 218 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 92 |
| AflIII | ACRYGT | 1 cut(s) | 219 |
| AgsI | TTSAA | 1 cut(s) | 50 |
| AjnI | CCWGG | 1 cut(s) | 145 |
| AsuHPI | GGTGA | 1 cut(s) | 161 |
| BccI | CCATC | 2 cut(s) | 98, 149 |
| BciT130I | CCWGG | 1 cut(s) | 147 |
| Bme1390I | CCNGG | 1 cut(s) | 147 |
| BmrFI | CCNGG | 1 cut(s) | 147 |
| BpmI | CTGGAG | 1 cut(s) | 111 |
| BsaAI | YACGTR | 1 cut(s) | 220 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 92 |
| Bse1I | ACTGG | 1 cut(s) | 94 |
| BseBI | CCWGG | 1 cut(s) | 147 |
| BseGI | GGATG | 2 cut(s) | 160, 181 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 92 |
| BseNI | ACTGG | 1 cut(s) | 94 |
| BseRI | GAGGAG | 2 cut(s) | 86, 108 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 92 |
| BspQI | GCTCTTC | 2 cut(s) | 45, 71 |
| BsrI | ACTGG | 1 cut(s) | 94 |
| Bst2UI | CCWGG | 1 cut(s) | 147 |
| Bst6I | CTCTTC | 2 cut(s) | 45, 71 |
| BstBAI | YACGTR | 1 cut(s) | 220 |
| BstC8I | GCNNGC | 1 cut(s) | 83 |
| BstF5I | GGATG | 2 cut(s) | 160, 181 |
| BstNI | CCWGG | 1 cut(s) | 147 |
| BstSCI | CCNGG | 1 cut(s) | 145 |
| BtsCI | GGATG | 2 cut(s) | 160, 181 |
| Cac8I | GCNNGC | 1 cut(s) | 83 |
| Csp6I | GTAC | 1 cut(s) | 217 |
| CviJI | RGCY | 2 cut(s) | 85, 196 |
| CviKI_1 | RGCY | 2 cut(s) | 85, 196 |
| CviQI | GTAC | 1 cut(s) | 217 |
| Eam1104I | CTCTTC | 2 cut(s) | 45, 71 |
| EarI | CTCTTC | 2 cut(s) | 45, 71 |
| EcoRII | CCWGG | 1 cut(s) | 145 |
| FaiI | YATR | 5 cut(s) | 36, 57, 168, 170, 189 |
| FauNDI | CATATG | 1 cut(s) | 168 |
| FokI | GGATG | 2 cut(s) | 167, 188 |
| GsuI | CTGGAG | 1 cut(s) | 111 |
| HphI | GGTGA | 1 cut(s) | 161 |
| HpyCH4IV | ACGT | 1 cut(s) | 219 |
| HpySE526I | ACGT | 1 cut(s) | 219 |
| LguI | GCTCTTC | 2 cut(s) | 45, 71 |
| LpnPI | CCDG | 4 cut(s) | 75, 132, 159, 210 |
| MaeII | ACGT | 1 cut(s) | 219 |
| MboII | GAAGA | 3 cut(s) | 62, 88, 113 |
| MluCI | AATT | 1 cut(s) | 181 |
| MnlI | CCTC | 7 cut(s) | 54, 64, 86, 91, 145, 166, 229 |
| MseI | TTAA | 1 cut(s) | 228 |
| MspR9I | CCNGG | 1 cut(s) | 147 |
| MvaI | CCWGG | 1 cut(s) | 147 |
| NdeI | CATATG | 1 cut(s) | 168 |
| PciSI | GCTCTTC | 2 cut(s) | 45, 71 |
| Ppu21I | YACGTR | 1 cut(s) | 220 |
| Psp6I | CCWGG | 1 cut(s) | 145 |
| PspGI | CCWGG | 1 cut(s) | 145 |
| RsaI | GTAC | 1 cut(s) | 218 |
| RsaNI | GTAC | 1 cut(s) | 217 |
| SapI | GCTCTTC | 2 cut(s) | 45, 71 |
| SaqAI | TTAA | 1 cut(s) | 228 |
| ScrFI | CCNGG | 1 cut(s) | 147 |
| SetI | ASST | 2 cut(s) | 151, 222 |
| SgeI | CNNG | 7 cut(s) | 52, 94, 102, 158, 159, 209, 232 |
| Sse9I | AATT | 1 cut(s) | 181 |
| StyD4I | CCNGG | 1 cut(s) | 145 |
| TaiI | ACGT | 1 cut(s) | 222 |
| TasI | AATT | 1 cut(s) | 181 |
| Tru1I | TTAA | 1 cut(s) | 228 |
| Tru9I | TTAA | 1 cut(s) | 228 |
| TspDTI | ATGAA | 2 cut(s) | 23, 192 |