Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0011408

Physical Location & Seq

Genomic Coordinates Reverse (-)

52230161 .. 52274345

Gene Structure 44185 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G025550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGTCGAAACCAACCCACCAGAATAATCTAGAAATCAAGCGGCATGAAGATAATATTAAGTTTCTGCAGACTGAGATAAACCGCTTGAGTCATTCTATTCTTAATTTGCAAGCCACAATTGCTAGTATCATTTACCAATTGGTGAAGTGGAGATTTGGGCCAAAAACCGAGAAGGTTTTTCCTCCCGGGCCGGCAAGATTGCCGGTGTTGGGAAACCTACTGCAGTTAGGCCCTCTACCCCACAGAGACATGGCATCTTTATGCGACAAGTATGGGCCGTTGGTCTACCTACGACTTGGGAGCATTGATGCCATCACCACCAACGACCCCGACATCATACGTGAAATACTTATTCGACAAGATGACGTCTTTGCATCACGGCCGCGAACTTTGGCAGCGGTGCATTTGGCCTATGGTTGCGGCGACGTTGCGCTTGCCCCATTGGGCCCACAATGGAAGCGAATGAGGCGAATATGCATGGAACACTTGCTAACAACAAAACGCCTAGAGTCTTTTGCCAAACACCGAGCCGATGAAGCCCAACACCTCGTACAAGATGTTTGGGCCATGGCCCAGACGGGGAAGGCAGTGAACTTGAGGGAAGTGTTGGGTGGGTGGTCTATGAACAATGTGACTAGGATGTTGCTTGGTAAACAATATTTTGGGGCCGGGTCGGCAGGTCCACAAGAGGCCATGGAGTTCATGCACATAACCCATGAGTTATTTTGGCTGTTGGGGTTGATATATTTGGGAGATTACTTGCCAATTTGGAGGTGGGTGGATCCTTACGGTTGTGAGAAGAAAATGAGGGAAGTGGAGAAAAGGGTAGATGATTTTCATACCAAGATTCTTGAAGAGCATAGGAGGGTAAGGGAGGAGAAGAGCAAGCCAACTGGAGGAGAGGAAGATGGGGCAGAAATGGACTTTGTTGATGTTTTGTTGTCTTTGCCGGGTGAGGATGGGAAAAAGCATATGGAGGATGTGGAAATCAAAGCTCTAATACAGGATATGATAGCTGCTGCCACAGACACTTCAGCTGTGACCAACGAATGGGCGATGGTTGAGGTGATCAAGCATCCACGTGTCCTCCGTAAGATCCAAGAAGAGCTCGATTTAGTCGTGGGTCAACATAGAATGGTCAACGAATCAGACCTACCCCATCTTAACTACCTACGCTGCGTCGTACGCGAAACCTTCCGCATGCATCCGGCAGGACCCTTCCTCATTCCGCACGAGTCATTACGCGCCACGTGGATCAACGGTTACTACATCCCCGCCAAGACACGTGTCTTCATCAACACCCATGGGCTGGGCCGAAACACAAAGCTATGGGACAATGTCGAGGAGTTTAGGCCCGAGCGGCATTGGCTCGATGATGGGAGCCGAGTCGAGATTAGCCATGGAGTCGATTTCAAAATTCTTCCTTTTAGTGCGGGAAAGAGAAAGTGTCCCGGCGCGCCGCTTGGGGTGACTCTAGTCTTGATGGCTTTGGCTCGGCTTTTTCATTGTTTTAACTGGACACCACCGGAGGGTTTGAGGCCGGAAGACATTGATAACAAAGAGGTTTATGGAATGACAATGCCTAAGGTTCAACCCTTGATGGCTGTTGCTACTCCTCGCTTGGCAAACCATATGTATCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002933 GO:0003006 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009555 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009908 GO:0009987 GO:0010033 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016043 GO:0016053 GO:0016491 GO:0016705 GO:0016709 GO:0019438 GO:0019748 GO:0019752 GO:0022414 GO:0022607 GO:0030198 GO:0030258 GO:0032501 GO:0032502 GO:0032787 GO:0032989 GO:0042221 GO:0043062 GO:0043436 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044550 GO:0045229 GO:0046394 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050896 GO:0051791 GO:0051792 GO:0052722 GO:0055114 GO:0061458 GO:0071704 GO:0071840 GO:0072330 GO:0080110 GO:0085029 GO:0090567 GO:0099402 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR p450

Protein Analysis

547

Amino Acids

62.58

Weight (kDa)

7.38

Isoelectric Point (pI)

41.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	61 - 529	5.7e-92	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011408)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01280
fragaria_vesca	FvH4_7g16710
malus_domestica	MD01G1082400.v1.1
prunus_persica	Prupe.2G189800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0359911 RchiOBHm_Chr1g0359941 RchiOBHm_Chr1g0359971
rosa_laevigata	RLG00000027844
rosa_multiflora	Rmu_sc0008215.1_g000002
rosa_roxburghii	Rroxscaffold_4G00296660 Rroxscaffold_4G00296670 Rroxscaffold_4G00296700
rosa_rugosa	Rorug01G0273500
rosa_samantha	Rh1AG287600 Rh1AG287800 Rh1AG288000 Rh1BG253400 Rh1CG270900 Rh1DG282200
rosa_wichuraiana	Rw1G025550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	369
Acc36I	ACCTGC	1 cut(s)	668
AccB7I	CCANNNNNTGG	2 cut(s)	1050, 1309
AccBSI	CCGCTC	1 cut(s)	1360
AccI	GTMKAC	1 cut(s)	285
AccII	CGCG	4 cut(s)	385, 1188, 1245, 1457
AclWI	GGATC	4 cut(s)	776, 789, 1090, 1262
AcoI	YGGCCR	1 cut(s)	380
AcsI	RAATTY	1 cut(s)	1416
AcuI	CTGAAG	1 cut(s)	1017
AcvI	CACGTG	3 cut(s)	1082, 1251, 1286
AcyI	GRCGYC	1 cut(s)	366
AfaI	GTAC	2 cut(s)	552, 1185
AfiI	CCNNNNNNNGG	6 cut(s)	209, 579, 896, 1050, 1309, 1529
AflIII	ACRYGT	3 cut(s)	1081, 1283, 1285
AgsI	TTSAA	3 cut(s)	854, 1414, 1592
AluBI	AGCT	5 cut(s)	995, 1016, 1037, 1108, 1327
AluI	AGCT	5 cut(s)	995, 1016, 1037, 1108, 1327
Alw21I	GWGCWC	1 cut(s)	1110
Alw26I	GTCTC	1 cut(s)	240
AlwI	GGATC	4 cut(s)	776, 789, 1090, 1262
Ama87I	CYCGRG	2 cut(s)	185, 1355
ApaI	GGGCCC	1 cut(s)	449
ApeKI	GCWGC	4 cut(s)	395, 1016, 1019, 1176
ApoI	RAATTY	1 cut(s)	1416
AscI	GGCGCGCC	1 cut(s)	1455
AspLEI	GCGC	4 cut(s)	433, 1247, 1457, 1459
AsuC2I	CCSGG	5 cut(s)	186, 187, 670, 951, 1452
AsuHPI	GGTGA	5 cut(s)	154, 307, 965, 1078, 1480
AvaI	CYCGRG	2 cut(s)	185, 1355
AvaII	GGWCC	2 cut(s)	680, 1214
AxyI	CCTNAGG	1 cut(s)	1584
BaeGI	GKGCMC	1 cut(s)	449
BamHI	GGATCC	1 cut(s)	781
BanII	GRGCYC	2 cut(s)	449, 1110
BauI	CACGAG	1 cut(s)	1232
BbrPI	CACGTG	3 cut(s)	1082, 1251, 1286
BbsI	GAAGAC	2 cut(s)	1282, 1551
Bbv12I	GWGCWC	1 cut(s)	1110
BbvI	GCAGC	4 cut(s)	407, 1003, 1006, 1163
BccI	CCATC	8 cut(s)	320, 902, 953, 1051, 1167, 1370, 1477, 1594
BceAI	ACGGC	2 cut(s)	262, 395
BclI	TGATCA	1 cut(s)	1068
BcnI	CCSGG	5 cut(s)	186, 187, 670, 951, 1452
BcoDI	GTCTC	1 cut(s)	240
BfaI	CTAG	5 cut(s)	29, 123, 506, 636, 1475
BfmI	CTRYAG	2 cut(s)	65, 221
BfuAI	ACCTGC	1 cut(s)	668
BglI	GCCNNNNNGGC	2 cut(s)	674, 1360
BisI	GCNGC	9 cut(s)	41, 383, 396, 421, 1017, 1020, 1177, 1361, 1460
BlsI	GCNGC	9 cut(s)	42, 384, 397, 422, 1018, 1021, 1178, 1362, 1461
Bme1390I	CCNGG	5 cut(s)	186, 187, 670, 951, 1452
Bme18I	GGWCC	2 cut(s)	680, 1214
BmeT110I	CYCGRG	2 cut(s)	185, 1355
BmiI	GGNNCC	5 cut(s)	447, 667, 783, 1216, 1382
BmrFI	CCNGG	5 cut(s)	186, 187, 670, 951, 1452
BmsI	GCATC	5 cut(s)	263, 298, 383, 1084, 1213
BoxI	GACNNNNGTC	2 cut(s)	1286, 1475
BpiI	GAAGAC	2 cut(s)	1282, 1551
BpmI	CTGGAG	1 cut(s)	915
BpuEI	CTTGAG	2 cut(s)	106, 616
BpuMI	CCSGG	5 cut(s)	186, 187, 670, 951, 1452
BsaAI	YACGTR	4 cut(s)	341, 1082, 1251, 1286
BsaHI	GRCGYC	1 cut(s)	366
BsaJI	CCNNGG	5 cut(s)	185, 567, 693, 1303, 1399
BsaWI	WCCGGW	1 cut(s)	1525
BsaXI	ACNNNNNCTCC	2 cut(s)	1071, 1101
Bsc4I	CCNNNNNNNGG	6 cut(s)	209, 579, 896, 1050, 1309, 1529
Bse118I	RCCGGY	2 cut(s)	190, 202
Bse1I	ACTGG	2 cut(s)	898, 1520
Bse21I	CCTNAGG	1 cut(s)	1584
BseDI	CCNNGG	5 cut(s)	185, 567, 693, 1303, 1399
BseGI	GGATG	6 cut(s)	645, 964, 985, 1075, 1204, 1269
BseLI	CCNNNNNNNGG	6 cut(s)	209, 579, 896, 1050, 1309, 1529
BseMII	CTCAG	1 cut(s)	63
BseNI	ACTGG	2 cut(s)	898, 1520
BsePI	GCGCGC	1 cut(s)	1455
BseRI	GAGGAG	4 cut(s)	890, 912, 1358, 1605
BseSI	GKGCMC	1 cut(s)	449
BseX3I	CGGCCG	1 cut(s)	380
BseXI	GCAGC	4 cut(s)	407, 1003, 1006, 1163
BseYI	CCCAGC	1 cut(s)	1309
Bsh1236I	CGCG	4 cut(s)	385, 1188, 1245, 1457
Bsh1285I	CGRYCG	1 cut(s)	383
BsiEI	CGRYCG	1 cut(s)	383
BsiHKAI	GWGCWC	1 cut(s)	1110
BsiHKCI	CYCGRG	2 cut(s)	185, 1355
BsiSI	CCGG	9 cut(s)	186, 191, 203, 669, 950, 1208, 1452, 1526, 1541
BsiWI	CGTACG	1 cut(s)	1183
BslFI	GGGAC	2 cut(s)	1346, 1434
BslI	CCNNNNNNNGG	6 cut(s)	209, 579, 896, 1050, 1309, 1529
BsmAI	GTCTC	1 cut(s)	240
BsmFI	GGGAC	2 cut(s)	1346, 1434
BsoBI	CYCGRG	2 cut(s)	185, 1355
Bsp120I	GGGCCC	1 cut(s)	445
Bsp1286I	GDGCHC	2 cut(s)	449, 1110
Bsp143I	GATC	4 cut(s)	781, 1068, 1095, 1254
Bsp19I	CCATGG	4 cut(s)	567, 693, 1303, 1399
BspCNI	CTCAG	1 cut(s)	64
BspFNI	CGCG	4 cut(s)	385, 1188, 1245, 1457
BspLI	GGNNCC	5 cut(s)	447, 667, 783, 1216, 1382
BspMAI	CTGCAG	2 cut(s)	69, 225
BspMI	ACCTGC	1 cut(s)	668
BspPI	GGATC	4 cut(s)	776, 789, 1090, 1262
BspQI	GCTCTTC	3 cut(s)	849, 875, 1098
BsrBI	CCGCTC	1 cut(s)	1360
BsrFI	RCCGGY	2 cut(s)	190, 202
BsrI	ACTGG	2 cut(s)	898, 1520
BssAI	RCCGGY	2 cut(s)	190, 202
BssECI	CCNNGG	5 cut(s)	185, 567, 693, 1303, 1399
BssHII	GCGCGC	1 cut(s)	1455
BssMI	GATC	4 cut(s)	781, 1068, 1095, 1254
BssNI	GRCGYC	1 cut(s)	366
BssSI	CACGAG	1 cut(s)	1232
BssT1I	CCWWGG	4 cut(s)	567, 693, 1303, 1399
Bst2BI	CACGAG	1 cut(s)	1232
Bst4CI	ACNGT	2 cut(s)	791, 1262
Bst6I	CTCTTC	3 cut(s)	849, 875, 1098
BstACI	GRCGYC	1 cut(s)	366
BstBAI	YACGTR	4 cut(s)	341, 1082, 1251, 1286
BstC8I	GCNNGC	6 cut(s)	111, 192, 435, 887, 1202, 1457
BstDEI	CTNAG	2 cut(s)	72, 1584
BstDSI	CCRYGG	4 cut(s)	567, 693, 1303, 1399
BstF5I	GGATG	6 cut(s)	645, 964, 985, 1075, 1204, 1269
BstFNI	CGCG	4 cut(s)	385, 1188, 1245, 1457
BstHHI	GCGC	4 cut(s)	433, 1247, 1457, 1459
BstKTI	GATC	4 cut(s)	784, 1071, 1098, 1257
BstMAI	GTCTC	1 cut(s)	240
BstMBI	GATC	4 cut(s)	781, 1068, 1095, 1254
BstMCI	CGRYCG	1 cut(s)	383
BstMWI	GCNNNNNNNGC	7 cut(s)	119, 466, 536, 674, 1185, 1360, 1366
BstNSI	RCATGY	1 cut(s)	1204
BstPAI	GACNNNNGTC	2 cut(s)	1286, 1475
BstSCI	CCNGG	5 cut(s)	184, 185, 668, 949, 1450
BstSFI	CTRYAG	2 cut(s)	65, 221
BstSLI	GKGCMC	1 cut(s)	449
BstUI	CGCG	4 cut(s)	385, 1188, 1245, 1457
BstV1I	GCAGC	4 cut(s)	407, 1003, 1006, 1163
BstV2I	GAAGAC	2 cut(s)	1282, 1551
BstX2I	RGATCY	2 cut(s)	781, 1095
BstYI	RGATCY	2 cut(s)	781, 1095
BstZI	CGGCCG	1 cut(s)	380
Bsu36I	CCTNAGG	1 cut(s)	1584
BtgI	CCRYGG	4 cut(s)	567, 693, 1303, 1399
BtgZI	GCGATG	1 cut(s)	1070
BtsCI	GGATG	6 cut(s)	645, 964, 985, 1075, 1204, 1269
BtsI	GCAGTG	1 cut(s)	594
BtsIMutI	CAGTG	1 cut(s)	594
BveI	ACCTGC	1 cut(s)	668
Cac8I	GCNNGC	6 cut(s)	111, 192, 435, 887, 1202, 1457
CfoI	GCGC	4 cut(s)	433, 1247, 1457, 1459
Cfr10I	RCCGGY	2 cut(s)	190, 202
Cfr9I	CCCGGG	1 cut(s)	185
CseI	GACGC	1 cut(s)	1168
Csp6I	GTAC	2 cut(s)	551, 1184
CviQI	GTAC	2 cut(s)	551, 1184
DdeI	CTNAG	2 cut(s)	72, 1584
DpnI	GATC	4 cut(s)	783, 1070, 1097, 1256
DpnII	GATC	4 cut(s)	781, 1068, 1095, 1254
EaeI	YGGCCR	1 cut(s)	380
EagI	CGGCCG	1 cut(s)	380
Eam1104I	CTCTTC	3 cut(s)	849, 875, 1098
EarI	CTCTTC	3 cut(s)	849, 875, 1098
Ecl136II	GAGCTC	1 cut(s)	1108
EclXI	CGGCCG	1 cut(s)	380
Eco130I	CCWWGG	4 cut(s)	567, 693, 1303, 1399
Eco24I	GRGCYC	2 cut(s)	449, 1110
Eco47I	GGWCC	2 cut(s)	680, 1214
Eco52I	CGGCCG	1 cut(s)	380
Eco53kI	GAGCTC	1 cut(s)	1108
Eco57I	CTGAAG	1 cut(s)	1017
Eco72I	CACGTG	3 cut(s)	1082, 1251, 1286
Eco81I	CCTNAGG	1 cut(s)	1584
Eco88I	CYCGRG	2 cut(s)	185, 1355
EcoICRI	GAGCTC	1 cut(s)	1108
EcoO109I	RGGNCCY	2 cut(s)	230, 1214
EcoT14I	CCWWGG	4 cut(s)	567, 693, 1303, 1399
EcoT22I	ATGCAT	2 cut(s)	479, 1206
EcoT38I	GRGCYC	2 cut(s)	449, 1110
ErhI	CCWWGG	4 cut(s)	567, 693, 1303, 1399
FaqI	GGGAC	2 cut(s)	1346, 1434
FauI	CCCGC	2 cut(s)	1282, 1426
FauNDI	CATATG	2 cut(s)	972, 1632
FbaI	TGATCA	1 cut(s)	1068
FblI	GTMKAC	1 cut(s)	285
Fnu4HI	GCNGC	9 cut(s)	41, 383, 396, 421, 1017, 1020, 1177, 1361, 1460
FokI	GGATG	6 cut(s)	652, 971, 992, 1062, 1191, 1256
FriOI	GRGCYC	2 cut(s)	449, 1110
Fsp4HI	GCNGC	9 cut(s)	41, 383, 396, 421, 1017, 1020, 1177, 1361, 1460
FspBI	CTAG	5 cut(s)	29, 123, 506, 636, 1475
GlaI	GCGC	4 cut(s)	432, 1246, 1456, 1458
GluI	GCNGC	9 cut(s)	41, 383, 396, 421, 1017, 1020, 1177, 1361, 1460
GsaI	CCCAGC	1 cut(s)	1313
GsuI	CTGGAG	1 cut(s)	915
HapII	CCGG	9 cut(s)	186, 191, 203, 669, 950, 1208, 1452, 1526, 1541
HgaI	GACGC	1 cut(s)	1168
HhaI	GCGC	4 cut(s)	433, 1247, 1457, 1459
Hin1I	GRCGYC	1 cut(s)	366
Hin6I	GCGC	4 cut(s)	431, 1245, 1455, 1457
HinP1I	GCGC	4 cut(s)	431, 1245, 1455, 1457
HincII	GTYRAC	2 cut(s)	1127, 1141
HindII	GTYRAC	2 cut(s)	1127, 1141
HinfI	GANTC	8 cut(s)	88, 509, 847, 1145, 1235, 1386, 1404, 1471
HpaII	CCGG	9 cut(s)	186, 191, 203, 669, 950, 1208, 1452, 1526, 1541
HphI	GGTGA	5 cut(s)	154, 307, 965, 1078, 1480
Hpy166II	GTNNAC	6 cut(s)	286, 592, 653, 683, 1127, 1141
Hpy188I	TCNGA	1 cut(s)	1150
Hpy188III	TCNNGA	4 cut(s)	29, 851, 1390, 1480
Hpy8I	GTNNAC	6 cut(s)	286, 592, 653, 683, 1127, 1141
Hpy99I	CGWCG	2 cut(s)	428, 1184
HpyAV	CCTTC	4 cut(s)	166, 577, 1204, 1228
HpyCH4III	ACNGT	2 cut(s)	791, 1262
HpyCH4IV	ACGT	6 cut(s)	340, 366, 426, 1081, 1250, 1285
HpyCH4V	TGCA	8 cut(s)	67, 109, 223, 374, 403, 477, 706, 1204
HpyF10VI	GCNNNNNNNGC	7 cut(s)	119, 466, 536, 674, 1185, 1360, 1366
HpyF3I	CTNAG	2 cut(s)	72, 1584
HpySE526I	ACGT	6 cut(s)	340, 366, 426, 1081, 1250, 1285
Hsp92I	GRCGYC	1 cut(s)	366
HspAI	GCGC	4 cut(s)	431, 1245, 1455, 1457
KroI	GCCGGC	1 cut(s)	190
KroNI	GCCGGC	1 cut(s)	192
Ksp22I	TGATCA	1 cut(s)	1068
Kzo9I	GATC	4 cut(s)	781, 1068, 1095, 1254
LguI	GCTCTTC	3 cut(s)	849, 875, 1098
LmnI	GCTCC	2 cut(s)	300, 1380
Lsp1109I	GCAGC	4 cut(s)	407, 1003, 1006, 1163
LweI	GCATC	5 cut(s)	263, 298, 383, 1084, 1213
MaeI	CTAG	5 cut(s)	29, 123, 506, 636, 1475
MaeII	ACGT	6 cut(s)	340, 366, 426, 1081, 1250, 1285
MaeIII	GTNAC	4 cut(s)	631, 1039, 1262, 1468
MalI	GATC	4 cut(s)	783, 1070, 1097, 1256
MbiI	CCGCTC	1 cut(s)	1360
MboI	GATC	4 cut(s)	781, 1068, 1095, 1254
MboII	GAAGA	9 cut(s)	59, 811, 866, 892, 917, 1115, 1282, 1412, 1556
MfeI	CAATTG	2 cut(s)	117, 137
MflI	RGATCY	2 cut(s)	781, 1095
MhlI	GDGCHC	2 cut(s)	449, 1110
MluCI	AATT	5 cut(s)	103, 117, 137, 765, 1416
MlyI	GAGTC	6 cut(s)	97, 518, 1244, 1395, 1413, 1465
Mph1103I	ATGCAT	2 cut(s)	479, 1206
MroNI	GCCGGC	1 cut(s)	190
MseI	TTAA	4 cut(s)	57, 102, 1164, 1512
MslI	CAYNNNNRTG	2 cut(s)	259, 1080
MspA1I	CMGCKG	2 cut(s)	398, 1037
MspI	CCGG	9 cut(s)	186, 191, 203, 669, 950, 1208, 1452, 1526, 1541
MspR9I	CCNGG	5 cut(s)	186, 187, 670, 951, 1452
MunI	CAATTG	2 cut(s)	117, 137
MvnI	CGCG	4 cut(s)	385, 1188, 1245, 1457
MwoI	GCNNNNNNNGC	7 cut(s)	119, 466, 536, 674, 1185, 1360, 1366
NaeI	GCCGGC	1 cut(s)	192
NciI	CCSGG	5 cut(s)	186, 187, 670, 951, 1452
NcoI	CCATGG	4 cut(s)	567, 693, 1303, 1399
NdeI	CATATG	2 cut(s)	972, 1632
NdeII	GATC	4 cut(s)	781, 1068, 1095, 1254
NgoMIV	GCCGGC	1 cut(s)	190
NlaIV	GGNNCC	5 cut(s)	447, 667, 783, 1216, 1382
NmeAIII	GCCGAG	2 cut(s)	1409, 1474
NmuCI	GTSAC	3 cut(s)	631, 1039, 1468
NsiI	ATGCAT	2 cut(s)	479, 1206
NspI	RCATGY	1 cut(s)	1204
PaeI	GCATGC	1 cut(s)	1204
PalAI	GGCGCGCC	1 cut(s)	1455
PauI	GCGCGC	1 cut(s)	1455
PciSI	GCTCTTC	3 cut(s)	849, 875, 1098
PcsI	WCGNNNNNNNCGW	2 cut(s)	1087, 1116
PdiI	GCCGGC	1 cut(s)	192
PfeI	GAWTC	2 cut(s)	847, 1145
Pfl23II	CGTACG	1 cut(s)	1183
PflFI	GACNNNGTC	1 cut(s)	1337
PflMI	CCANNNNNTGG	2 cut(s)	1050, 1309
PkrI	GCNGC	9 cut(s)	42, 384, 397, 422, 1018, 1021, 1178, 1362, 1461
PleI	GAGTC	6 cut(s)	96, 517, 1243, 1394, 1412, 1465
PmaCI	CACGTG	3 cut(s)	1082, 1251, 1286
PmlI	CACGTG	3 cut(s)	1082, 1251, 1286
PpsI	GAGTC	6 cut(s)	96, 517, 1243, 1394, 1412, 1465
Ppu21I	YACGTR	4 cut(s)	341, 1082, 1251, 1286
PpuMI	RGGWCCY	1 cut(s)	1214
PshAI	GACNNNNGTC	2 cut(s)	1286, 1475
Psp124BI	GAGCTC	1 cut(s)	1110
Psp5II	RGGWCCY	1 cut(s)	1214
PspCI	CACGTG	3 cut(s)	1082, 1251, 1286
PspFI	CCCAGC	1 cut(s)	1309
PspLI	CGTACG	1 cut(s)	1183
PspN4I	GGNNCC	5 cut(s)	447, 667, 783, 1216, 1382
PspOMI	GGGCCC	1 cut(s)	445
PspPPI	RGGWCCY	1 cut(s)	1214
PstI	CTGCAG	2 cut(s)	69, 225
PsuI	RGATCY	2 cut(s)	781, 1095
PsyI	GACNNNGTC	1 cut(s)	1337
PteI	GCGCGC	1 cut(s)	1455
PvuII	CAGCTG	1 cut(s)	1037
RsaI	GTAC	2 cut(s)	552, 1185
RsaNI	GTAC	2 cut(s)	551, 1184
RseI	CAYNNNNRTG	2 cut(s)	259, 1080
SacI	GAGCTC	1 cut(s)	1110
SapI	GCTCTTC	3 cut(s)	849, 875, 1098
SaqAI	TTAA	4 cut(s)	57, 102, 1164, 1512
SatI	GCNGC	9 cut(s)	41, 383, 396, 421, 1017, 1020, 1177, 1361, 1460
Sau3AI	GATC	4 cut(s)	781, 1068, 1095, 1254
SchI	GAGTC	6 cut(s)	97, 518, 1244, 1395, 1413, 1465
ScrFI	CCNGG	5 cut(s)	186, 187, 670, 951, 1452
SduI	GDGCHC	2 cut(s)	449, 1110
SfaNI	GCATC	5 cut(s)	263, 298, 383, 1084, 1213
SfcI	CTRYAG	2 cut(s)	65, 221
SgsI	GGCGCGCC	1 cut(s)	1455
SinI	GGWCC	2 cut(s)	680, 1214
SmaI	CCCGGG	1 cut(s)	187
SmiMI	CAYNNNNRTG	2 cut(s)	259, 1080
SmlI	CTYRAG	2 cut(s)	85, 595
SmoI	CTYRAG	2 cut(s)	85, 595
SphI	GCATGC	1 cut(s)	1204
Sse9I	AATT	5 cut(s)	103, 117, 137, 765, 1416
SspI	AATATT	2 cut(s)	55, 659
SspMI	CTAG	5 cut(s)	29, 123, 506, 636, 1475
SstI	GAGCTC	1 cut(s)	1110
StyD4I	CCNGG	5 cut(s)	184, 185, 668, 949, 1450
StyI	CCWWGG	4 cut(s)	567, 693, 1303, 1399
TaaI	ACNGT	2 cut(s)	791, 1262
TaiI	ACGT	6 cut(s)	343, 369, 429, 1084, 1253, 1288
TaqI	TCGA	7 cut(s)	5, 355, 1110, 1341, 1371, 1389, 1407
TasI	AATT	5 cut(s)	103, 117, 137, 765, 1416
TauI	GCSGC	5 cut(s)	43, 385, 423, 1363, 1462
TfiI	GAWTC	2 cut(s)	847, 1145
Tru1I	TTAA	4 cut(s)	57, 102, 1164, 1512
Tru9I	TTAA	4 cut(s)	57, 102, 1164, 1512
TscAI	CASTG	1 cut(s)	594
TseFI	GTSAC	3 cut(s)	631, 1039, 1468
TseI	GCWGC	4 cut(s)	395, 1016, 1019, 1176
Tsp45I	GTSAC	3 cut(s)	631, 1039, 1468
TspDTI	ATGAA	7 cut(s)	60, 549, 638, 691, 827, 1282, 1493
TspGWI	ACGGA	1 cut(s)	1079
TspMI	CCCGGG	1 cut(s)	185
TspRI	CASTG	1 cut(s)	594
Tth111I	GACNNNGTC	1 cut(s)	1337
Van91I	CCANNNNNTGG	2 cut(s)	1050, 1309
VpaK11BI	GGWCC	2 cut(s)	680, 1214
XapI	RAATTY	1 cut(s)	1416
XbaI	TCTAGA	1 cut(s)	28
XceI	RCATGY	1 cut(s)	1204
XcmI	CCANNNNNNNNNTGG	1 cut(s)	771
XmaI	CCCGGG	1 cut(s)	185
XmiI	GTMKAC	1 cut(s)	285
XspI	CTAG	5 cut(s)	29, 123, 506, 636, 1475
ZraI	GACGTC	1 cut(s)	367
Zsp2I	ATGCAT	2 cut(s)	479, 1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.