No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0381071 RchiOBHm_Chr4g0412921 |
| rosa_laevigata | RLG00000031216 |
| rosa_multiflora | Rmu_sc0001304.1_g000023 Rmu_sc0022280.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00343330 |
| rosa_samantha | Rh2DG415100 Rh4AG176500 Rh4BG116700 Rh4BG151700 Rh4CG187500 Rh5AG038600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 83, 95, 108 |
| AcoI | YGGCCR | 1 cut(s) | 117 |
| AfaI | GTAC | 1 cut(s) | 139 |
| AgsI | TTSAA | 2 cut(s) | 149, 185 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 141, 173 |
| AluBI | AGCT | 2 cut(s) | 28, 75 |
| AluI | AGCT | 2 cut(s) | 28, 75 |
| AlwI | GGATC | 3 cut(s) | 83, 95, 108 |
| AoxI | GGCC | 1 cut(s) | 117 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 129, 162 |
| BalI | TGGCCA | 1 cut(s) | 119 |
| BamHI | GGATCC | 1 cut(s) | 100 |
| BclI | TGATCA | 1 cut(s) | 31 |
| BfaI | CTAG | 3 cut(s) | 50, 72, 252 |
| BmiI | GGNNCC | 1 cut(s) | 102 |
| BsaJI | CCNNGG | 1 cut(s) | 5 |
| Bse1I | ACTGG | 1 cut(s) | 120 |
| BseDI | CCNNGG | 1 cut(s) | 5 |
| BseNI | ACTGG | 1 cut(s) | 120 |
| BshFI | GGCC | 1 cut(s) | 119 |
| BsnI | GGCC | 1 cut(s) | 119 |
| Bsp143I | GATC | 3 cut(s) | 31, 88, 100 |
| BspANI | GGCC | 1 cut(s) | 119 |
| BspLI | GGNNCC | 1 cut(s) | 102 |
| BspPI | GGATC | 3 cut(s) | 83, 95, 108 |
| BsrI | ACTGG | 1 cut(s) | 120 |
| BssECI | CCNNGG | 1 cut(s) | 5 |
| BssMI | GATC | 3 cut(s) | 31, 88, 100 |
| Bst4CI | ACNGT | 1 cut(s) | 97 |
| BstC8I | GCNNGC | 1 cut(s) | 77 |
| BstKTI | GATC | 3 cut(s) | 34, 91, 103 |
| BstMBI | GATC | 3 cut(s) | 31, 88, 100 |
| BstX2I | RGATCY | 1 cut(s) | 100 |
| BstYI | RGATCY | 1 cut(s) | 100 |
| BsuRI | GGCC | 1 cut(s) | 119 |
| Cac8I | GCNNGC | 1 cut(s) | 77 |
| Csp6I | GTAC | 1 cut(s) | 138 |
| CviJI | RGCY | 4 cut(s) | 28, 49, 75, 119 |
| CviKI_1 | RGCY | 4 cut(s) | 28, 49, 75, 119 |
| CviQI | GTAC | 1 cut(s) | 138 |
| DpnI | GATC | 3 cut(s) | 33, 90, 102 |
| DpnII | GATC | 3 cut(s) | 31, 88, 100 |
| EaeI | YGGCCR | 1 cut(s) | 117 |
| FaiI | YATR | 5 cut(s) | 57, 66, 68, 211, 285 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 141, 173 |
| FbaI | TGATCA | 1 cut(s) | 31 |
| FspBI | CTAG | 3 cut(s) | 50, 72, 252 |
| HaeIII | GGCC | 1 cut(s) | 119 |
| HindIII | AAGCTT | 1 cut(s) | 26 |
| HinfI | GANTC | 2 cut(s) | 232, 242 |
| HpyAV | CCTTC | 2 cut(s) | 8, 13 |
| HpyCH4III | ACNGT | 1 cut(s) | 97 |
| HpyCH4IV | ACGT | 1 cut(s) | 166 |
| HpyCH4V | TGCA | 2 cut(s) | 59, 219 |
| HpySE526I | ACGT | 1 cut(s) | 166 |
| Ksp22I | TGATCA | 1 cut(s) | 31 |
| Kzo9I | GATC | 3 cut(s) | 31, 88, 100 |
| LpnPI | CCDG | 4 cut(s) | 20, 101, 133, 159 |
| MaeI | CTAG | 3 cut(s) | 50, 72, 252 |
| MaeII | ACGT | 1 cut(s) | 166 |
| MalI | GATC | 3 cut(s) | 33, 90, 102 |
| MboI | GATC | 3 cut(s) | 31, 88, 100 |
| MflI | RGATCY | 1 cut(s) | 100 |
| MlsI | TGGCCA | 1 cut(s) | 119 |
| MluNI | TGGCCA | 1 cut(s) | 119 |
| MmeI | TCCRAC | 1 cut(s) | 178 |
| MnlI | CCTC | 2 cut(s) | 39, 114 |
| Mox20I | TGGCCA | 1 cut(s) | 119 |
| MscI | TGGCCA | 1 cut(s) | 119 |
| MseI | TTAA | 2 cut(s) | 197, 305 |
| Msp20I | TGGCCA | 1 cut(s) | 119 |
| NdeII | GATC | 3 cut(s) | 31, 88, 100 |
| NlaIV | GGNNCC | 1 cut(s) | 102 |
| NmeAIII | GCCGAG | 1 cut(s) | 30 |
| PfeI | GAWTC | 2 cut(s) | 232, 242 |
| PspN4I | GGNNCC | 1 cut(s) | 102 |
| PsuI | RGATCY | 1 cut(s) | 100 |
| RsaI | GTAC | 1 cut(s) | 139 |
| RsaNI | GTAC | 1 cut(s) | 138 |
| SaqAI | TTAA | 2 cut(s) | 197, 305 |
| Sau3AI | GATC | 3 cut(s) | 31, 88, 100 |
| SetI | ASST | 6 cut(s) | 30, 44, 73, 77, 169, 178 |
| SspI | AATATT | 2 cut(s) | 127, 281 |
| SspMI | CTAG | 3 cut(s) | 50, 72, 252 |
| TaaI | ACNGT | 1 cut(s) | 97 |
| TaiI | ACGT | 1 cut(s) | 169 |
| TaqI | TCGA | 1 cut(s) | 235 |
| TfiI | GAWTC | 2 cut(s) | 232, 242 |
| Tru1I | TTAA | 2 cut(s) | 197, 305 |
| Tru9I | TTAA | 2 cut(s) | 197, 305 |
| TspDTI | ATGAA | 1 cut(s) | 120 |
| XspI | CTAG | 3 cut(s) | 50, 72, 252 |