RchiOBHm_Chr2g0087071

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0012555
Physical Location & Seq
Forward (+)
1972948 .. 1976711
3764 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46253

Sequence Viewer

Length: 2376 bp
ATGATGGGGAAGCAAAGTGGGAAGAAGAAAAAAAGTTCAGGGGATAGTCCAAAGCCAAGCAACAGTAGCGAAAATAGTCCGAAAACCCAAGATAAGGATACAGAAGTTTTCATTGCAATGGCTCATGAATTGAAGGATGAGGGGAATAAGTTGTTTCAGAAAAGGGACCATGGAGGAGCTATGTTGAAGTATGAGAAAGCCCTCAGATTGCTTCCCAGAAATCACATTGATGTGTCCTATCTTCGGAGTAATATGGCAGCTTGTTATATGCAGATGGGGTTGAGTGAGTATCCGAGGGCTATTAATGAGTGCAATTTGGCCCTTGAAGTTACACCCAAGTATAGTAAGGCTCTGCTGAAGAGGGCAAAGTGTTATGAGGCTTTGAATAGGTTGGATTTGGCTCTGAGAGATGTTGGTACCGTGTTGAACATGGAACCGAACAATATCATGGCACTGGAGGTTGCAGAAAGAGTGAAAGATGTGCTAGAGAAGAAGGGATTGAGGGTGAATGACACGGTGATTGAGTTGCCTCCTGATTATGTAGAACCAAGTCATAATGTGCTGCCAGGGAAATTAACGAAATTCAAGTGTCGGAAGAAGAAGGGGAACAAAGATGAAGAGAAGAAAGTTCATGAGGACAATACCGGGGGGAATACTGAAGACAAGATTGAGCAGAAGAAGGCTGTGGAAATAGGTGAGGAAAAGAAGTCTGTGGGTATAGAACCAAGTCATAATGTGCTGCCAGGAAAATTAATGAAATTGAAGAGCCGGAAGAAGAAGGGGAACAAAGATGAAGGGAAGAAAGTTCATGAGGACAATACGGGGGGGAATACTGAAGACAAGATTGAGGAGAAGAAGGCTGTGGAAATAGGTGAGCAAAAGAAGTCTGGGGGTATAGGTGATGTAGATAAGGATCTGGAAATAGCTGAGGAAAAGAAGGCAGAGGTCAAGGTAGTTGTGGAGGAGAAGATCACAACAACAGAAGAAGTGCCGAAAAGAAGTGTGAAATTGGTGTTGGGTGAGGACATAAGATGGGCTCAGTTGCCAGTAAATTGCACCCTCCTGCAACTAAGAGAGGTGATCCGTGATCGGTTTCCAAGATCAAGAGCAGTTCTTATCAAATATAGAGATGAAGAAGGTGATTTGGTCACCATCACTACTAATGAAGAGCTGAGATGGGCTGAAGAATCTGCAGAATCAGAAGGCTCTGTCAGGCTTTACATAATAGAAGTTAGCCCTGATCAGGATCCATTCTTTCAGGAACTGAAAGTTGAAGCGCACAAGCTTAACTATGGAGCTGAAAATGGTACATTGGTACACCACAAGGACATGAAGGGGTCATATTGCATTGAGGATTGGATTATTGATTTTGCTCAGCTGTTCAAGAACTATGCTGGCTTTGAATCTGATGCATACTTGGATCTTCATGAACTTGGGATGAAGTTCTACTCTGAGGCTATGGAGGAGACAGTTACCAGTGAAGAAGCTCAAGACATTTTCGACACAGCAGGAGAGAAGTTCCAGGAAATGGGAGCTTTAGCGTTGTTCAATTGGGGAAATGTTCACATGGCCAGGGCAAGGAAGAAGGTATTATTCACAGAAGATTCTTCCAAAGAATCTATCATTTCAAACATCAAAACTGCATATGAATGGGCACAAAAAGAATACACAGAAGCTGGAAGGAGATATGAAGAAGCGCTGCATATCAAACCCGACTTCTATGAAAGCTATCTGGCCCTTGGGCAGCAGCAGTTTGAGCAGGCTAAACTTTCTTGGTATTACGCAATTAGCAGCAATGTTGATTTGGAGACTTGGCCATCCACAGAGGTTCTTAGACTTTATAACAAGGCCGAAGACAACATGGAAAAGGGCATGCAGCTGTGGGAGGAATCGGAAGAGCAACGGTTGAGTGAACTCTCTAGTCCAACTAGTTGTAAAACCCAGTTGCAGAAGATGGGTTTGGATGGGATTGTCAAAGACATATCAGCAGATGAAGCTGCAGAACAAGCTACAAACATGAGATCTCAGATAAACCTTCTTTGGGGCACCATGCTGTACGAGCGATCTATAGTGGAGTTCAAATTGGGGCTACCTGTATGGCATGAATGTTTGGAAGTTGCAGTTGAGAAGTTTGGACTTGCTGGGGCTTCTCCAACAGATATAGCTGTTATGGTCAAAAACCACTCTTCAAATGATAATGCATTGGAAGGTTTAGGATTCAAGATTGATGAGATAATACAAGCATGGAATGAGATGTATGAAGCTAAGAAGTGGCAAAGTGGAATTCCATCATTTCGGCTAGAGCCATTACTTCGGCGGAGAGTTTCAAAACTTCATTTTGCTTTGGAGAATGCTTTAAAAGACAGCACTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1

Protein Analysis

791

Amino Acids

90.03

Weight (kDa)

5.48

Isoelectric Point (pI)

50.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 334 - 408 1e-13 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1842
Acc65I GGTACC 1 cut(s) 416
AccB1I GGYRCC 2 cut(s) 416, 2045
AccB7I CCANNNNNTGG 1 cut(s) 1528
AciI CCGC 1 cut(s) 2317
AclWI GGATC 5 cut(s) 921, 1075, 1241, 1254, 1428
AcoI YGGCCR 2 cut(s) 1569, 1814
AcsI RAATTY 2 cut(s) 581, 2283
AcuI CTGAAG 4 cut(s) 377, 678, 855, 1203
AfaI GTAC 4 cut(s) 418, 1309, 1317, 2057
AfeI AGCGCT 1 cut(s) 1698
AfiI CCNNNNNNNGG 6 cut(s) 94, 243, 1243, 1528, 1578, 2041
AhlI ACTAGT 1 cut(s) 1928
AjnI CCWGG 4 cut(s) 565, 742, 1521, 1571
AjuI GAANNNNNNNTTGG 4 cut(s) 998, 1030, 1943, 1975
Alw26I GTCTC 2 cut(s) 1460, 1802
AlwI GGATC 5 cut(s) 921, 1075, 1241, 1254, 1428
AlwNI CAGNNNCTG 2 cut(s) 1264, 1676
Aor51HI AGCGCT 1 cut(s) 1698
AoxI GGCC 5 cut(s) 318, 1569, 1734, 1814, 1848
ApeKI GCWGC 9 cut(s) 257, 562, 739, 1699, 1744, 1747, 1791, 1876, 1997
ApoI RAATTY 2 cut(s) 581, 2283
AseI ATTAAT 2 cut(s) 303, 752
Asp718I GGTACC 1 cut(s) 416
AspLEI GCGC 2 cut(s) 1279, 1699
AspS9I GGNCC 3 cut(s) 166, 319, 1735
AsuC2I CCSGG 1 cut(s) 646
AsuHPI GGTGA 9 cut(s) 517, 529, 707, 884, 911, 1031, 1090, 1141, 1151
AvaII GGWCC 1 cut(s) 166
BaeGI GKGCMC 2 cut(s) 1657, 2048
BaeI ACNNNNGTAYC 4 cut(s) 90, 123, 1299, 1332
BalI TGGCCA 2 cut(s) 1571, 1816
BamHI GGATCC 1 cut(s) 1246
BanI GGYRCC 2 cut(s) 416, 2045
BanII GRGCYC 1 cut(s) 1039
BbsI GAAGAC 3 cut(s) 666, 843, 1860
BbvCI CCTCAGC 1 cut(s) 927
BbvI GCAGC 9 cut(s) 269, 549, 726, 1686, 1756, 1759, 1803, 1888, 1984
BccI CCATC 8 cut(s) 268, 1026, 1160, 1170, 1825, 1948, 1958, 2296
BciT130I CCWGG 4 cut(s) 567, 744, 1523, 1573
BciVI GTATCC 2 cut(s) 91, 300
BclI TGATCA 1 cut(s) 1240
BcnI CCSGG 1 cut(s) 646
BcoDI GTCTC 2 cut(s) 1460, 1802
BcuI ACTAGT 1 cut(s) 1928
BfaI CTAG 4 cut(s) 485, 1920, 1929, 2300
BfmI CTRYAG 3 cut(s) 1191, 1998, 2067
BfoI RGCGCY 1 cut(s) 1700
BfuI GTATCC 2 cut(s) 91, 300
BglII AGATCT 1 cut(s) 2021
BisI GCNGC 9 cut(s) 258, 563, 740, 1700, 1745, 1748, 1792, 1877, 1998
BlpI GCTNAGC 1 cut(s) 1374
BlsI GCNGC 9 cut(s) 259, 564, 741, 1701, 1746, 1749, 1793, 1878, 1999
Bme1390I CCNGG 5 cut(s) 567, 646, 744, 1523, 1573
Bme18I GGWCC 1 cut(s) 166
BmgT120I GGNCC 3 cut(s) 166, 319, 1735
BmiI GGNNCC 5 cut(s) 167, 418, 435, 1248, 2047
BmrFI CCNGG 5 cut(s) 567, 646, 744, 1523, 1573
BmrI ACTGGG 1 cut(s) 1936
BmsI GCATC 1 cut(s) 1399
BmuI ACTGGG 1 cut(s) 1936
BpiI GAAGAC 3 cut(s) 666, 843, 1860
BpmI CTGGAG 1 cut(s) 476
Bpu10I CCTNAGC 1 cut(s) 927
Bpu1102I GCTNAGC 1 cut(s) 1374
BpuEI CTTGAG 1 cut(s) 1473
BpuMI CCSGG 1 cut(s) 646
BsaBI GATNNNNATC 2 cut(s) 912, 1245
BsaJI CCNNGG 6 cut(s) 169, 293, 566, 645, 1572, 1738
Bsc4I CCNNNNNNNGG 6 cut(s) 94, 243, 1243, 1528, 1578, 2041
Bse1I ACTGG 4 cut(s) 459, 1046, 1476, 1942
Bse3DI GCAATG 3 cut(s) 111, 123, 1801
Bse8I GATNNNNATC 2 cut(s) 912, 1245
BseBI CCWGG 4 cut(s) 567, 744, 1523, 1573
BseDI CCNNGG 6 cut(s) 169, 293, 566, 645, 1572, 1738
BseGI GGATG 4 cut(s) 142, 1443, 1817, 1969
BseJI GATNNNNATC 2 cut(s) 912, 1245
BseLI CCNNNNNNNGG 6 cut(s) 94, 243, 1243, 1528, 1578, 2041
BseMI GCAATG 3 cut(s) 111, 123, 1801
BseMII CTCAG 8 cut(s) 217, 395, 918, 1052, 1163, 1388, 1443, 2039
BseNI ACTGG 4 cut(s) 459, 1046, 1476, 1942
BseRI GAGGAG 4 cut(s) 189, 863, 977, 1478
BseSI GKGCMC 2 cut(s) 1657, 2048
BseXI GCAGC 9 cut(s) 269, 549, 726, 1686, 1756, 1759, 1803, 1888, 1984
BseYI CCCAGC 1 cut(s) 2141
BshFI GGCC 5 cut(s) 320, 1571, 1736, 1816, 1850
BshNI GGYRCC 2 cut(s) 416, 2045
BsiSI CCGG 2 cut(s) 645, 769
BslFI GGGAC 1 cut(s) 179
BslI CCNNNNNNNGG 6 cut(s) 94, 243, 1243, 1528, 1578, 2041
BsmAI GTCTC 2 cut(s) 1460, 1802
BsmFI GGGAC 1 cut(s) 179
BsmI GAATGC 1 cut(s) 2356
BsnI GGCC 5 cut(s) 320, 1571, 1736, 1816, 1850
Bsp1286I GDGCHC 3 cut(s) 1039, 1657, 2048
Bsp1720I GCTNAGC 1 cut(s) 1374
Bsp19I CCATGG 1 cut(s) 169
BspACI CCGC 1 cut(s) 2317
BspANI GGCC 5 cut(s) 320, 1571, 1736, 1816, 1850
BspCNI CTCAG 8 cut(s) 216, 396, 919, 1051, 1164, 1387, 1444, 2038
BspHI TCATGA 4 cut(s) 124, 631, 808, 1426
BspLI GGNNCC 5 cut(s) 167, 418, 435, 1248, 2047
BspMAI CTGCAG 2 cut(s) 1195, 2002
BspPI GGATC 5 cut(s) 921, 1075, 1241, 1254, 1428
BspQI GCTCTTC 3 cut(s) 758, 1161, 1890
BspT107I GGYRCC 2 cut(s) 416, 2045
BsrDI GCAATG 3 cut(s) 111, 123, 1801
BsrI ACTGG 4 cut(s) 459, 1046, 1476, 1942
BssECI CCNNGG 6 cut(s) 169, 293, 566, 645, 1572, 1738
BssT1I CCWWGG 2 cut(s) 169, 1738
Bst2UI CCWGG 4 cut(s) 567, 744, 1523, 1573
Bst4CI ACNGT 5 cut(s) 65, 421, 517, 1471, 1905
Bst6I CTCTTC 6 cut(s) 353, 612, 758, 1161, 1890, 2191
BstC8I GCNNGC 3 cut(s) 1396, 1761, 1874
BstDSI CCRYGG 1 cut(s) 169
BstEII GGTNACC 1 cut(s) 1147
BstF5I GGATG 4 cut(s) 142, 1443, 1817, 1969
BstH2I RGCGCY 1 cut(s) 1700
BstHHI GCGC 2 cut(s) 1279, 1699
BstMAI GTCTC 2 cut(s) 1460, 1802
BstMWI GCNNNNNNNGC 5 cut(s) 66, 1756, 1994, 2006, 2059
BstNI CCWGG 4 cut(s) 567, 744, 1523, 1573
BstNSI RCATGY 1 cut(s) 1876
BstPI GGTNACC 1 cut(s) 1147
BstSCI CCNGG 5 cut(s) 565, 644, 742, 1521, 1571
BstSFI CTRYAG 3 cut(s) 1191, 1998, 2067
BstSLI GKGCMC 2 cut(s) 1657, 2048
BstV1I GCAGC 9 cut(s) 269, 549, 726, 1686, 1756, 1759, 1803, 1888, 1984
BstV2I GAAGAC 3 cut(s) 666, 843, 1860
BstX2I RGATCY 4 cut(s) 913, 1246, 1420, 2021
BstYI RGATCY 4 cut(s) 913, 1246, 1420, 2021
BsuI GTATCC 2 cut(s) 91, 300
BsuRI GGCC 5 cut(s) 320, 1571, 1736, 1816, 1850
BtgI CCRYGG 1 cut(s) 169
BtsCI GGATG 4 cut(s) 142, 1443, 1817, 1969
BtsIMutI CAGTG 3 cut(s) 452, 1483, 2367
Cac8I GCNNGC 3 cut(s) 1396, 1761, 1874
CaiI CAGNNNCTG 2 cut(s) 1264, 1676
CciI TCATGA 4 cut(s) 124, 631, 808, 1426
CfoI GCGC 2 cut(s) 1279, 1699
Cfr13I GGNCC 3 cut(s) 166, 319, 1735
Csp6I GTAC 4 cut(s) 417, 1308, 1316, 2056
CviQI GTAC 4 cut(s) 417, 1308, 1316, 2056
DraI TTTAAA 1 cut(s) 2358
EaeI YGGCCR 2 cut(s) 1569, 1814
Eam1104I CTCTTC 6 cut(s) 353, 612, 758, 1161, 1890, 2191
EarI CTCTTC 6 cut(s) 353, 612, 758, 1161, 1890, 2191
EciI GGCGGA 1 cut(s) 2332
Eco130I CCWWGG 2 cut(s) 169, 1738
Eco24I GRGCYC 1 cut(s) 1039
Eco47I GGWCC 1 cut(s) 166
Eco47III AGCGCT 1 cut(s) 1698
Eco57I CTGAAG 4 cut(s) 377, 678, 855, 1203
Eco91I GGTNACC 1 cut(s) 1147
EcoO65I GGTNACC 1 cut(s) 1147
EcoRI GAATTC 1 cut(s) 2283
EcoRII CCWGG 4 cut(s) 565, 742, 1521, 1571
EcoT14I CCWWGG 2 cut(s) 169, 1738
EcoT22I ATGCAT 2 cut(s) 1414, 2203
EcoT38I GRGCYC 1 cut(s) 1039
ErhI CCWWGG 2 cut(s) 169, 1738
FaqI GGGAC 1 cut(s) 179
FauNDI CATATG 1 cut(s) 1645
FbaI TGATCA 1 cut(s) 1240
Fnu4HI GCNGC 9 cut(s) 258, 563, 740, 1700, 1745, 1748, 1792, 1877, 1998
FokI GGATG 4 cut(s) 149, 1450, 1804, 1976
FriOI GRGCYC 1 cut(s) 1039
Fsp4HI GCNGC 9 cut(s) 258, 563, 740, 1700, 1745, 1748, 1792, 1877, 1998
FspBI CTAG 4 cut(s) 485, 1920, 1929, 2300
GlaI GCGC 2 cut(s) 1278, 1698
GluI GCNGC 9 cut(s) 258, 563, 740, 1700, 1745, 1748, 1792, 1877, 1998
GsaI CCCAGC 1 cut(s) 2145
GsuI CTGGAG 1 cut(s) 476
HaeII RGCGCY 1 cut(s) 1700
HaeIII GGCC 5 cut(s) 320, 1571, 1736, 1816, 1850
HapII CCGG 2 cut(s) 645, 769
HhaI GCGC 2 cut(s) 1279, 1699
Hin6I GCGC 2 cut(s) 1277, 1697
HinP1I GCGC 2 cut(s) 1277, 1697
HindIII AAGCTT 1 cut(s) 1283
HinfI GANTC 7 cut(s) 1187, 1196, 1403, 1604, 1616, 1889, 2217
HpaII CCGG 2 cut(s) 645, 769
HphI GGTGA 9 cut(s) 517, 529, 707, 884, 911, 1031, 1090, 1141, 1151
Hpy166II GTNNAC 3 cut(s) 1318, 1564, 1913
Hpy8I GTNNAC 3 cut(s) 1318, 1564, 1913
HpyCH4III ACNGT 5 cut(s) 65, 421, 517, 1471, 1905
HpyF10VI GCNNNNNNNGC 5 cut(s) 66, 1756, 1994, 2006, 2059
HspAI GCGC 2 cut(s) 1277, 1697
KpnI GGTACC 1 cut(s) 420
Ksp22I TGATCA 1 cut(s) 1240
LguI GCTCTTC 3 cut(s) 758, 1161, 1890
LmnI GCTCC 3 cut(s) 176, 1295, 1532
Lsp1109I GCAGC 9 cut(s) 269, 549, 726, 1686, 1756, 1759, 1803, 1888, 1984
LweI GCATC 1 cut(s) 1399
MaeI CTAG 4 cut(s) 485, 1920, 1929, 2300
MaeIII GTNAC 3 cut(s) 328, 1147, 1471
MfeI CAATTG 1 cut(s) 1549
MflI RGATCY 4 cut(s) 913, 1246, 1420, 2021
MhlI GDGCHC 3 cut(s) 1039, 1657, 2048
MlsI TGGCCA 2 cut(s) 1571, 1816
MluNI TGGCCA 2 cut(s) 1571, 1816
MmeI TCCRAC 4 cut(s) 372, 572, 1949, 2177
Mox20I TGGCCA 2 cut(s) 1571, 1816
Mph1103I ATGCAT 2 cut(s) 1414, 2203
MscI TGGCCA 2 cut(s) 1571, 1816
MseI TTAA 5 cut(s) 303, 575, 752, 1287, 2357
MslI CAYNNNNRTG 4 cut(s) 116, 228, 230, 1648
Msp20I TGGCCA 2 cut(s) 1571, 1816
MspA1I CMGCKG 2 cut(s) 1378, 1879
MspI CCGG 2 cut(s) 645, 769
MspR9I CCNGG 5 cut(s) 567, 646, 744, 1523, 1573
MunI CAATTG 1 cut(s) 1549
Mva1269I GAATGC 1 cut(s) 2356
MvaI CCWGG 4 cut(s) 567, 744, 1523, 1573
MwoI GCNNNNNNNGC 5 cut(s) 66, 1756, 1994, 2006, 2059
NciI CCSGG 1 cut(s) 646
NcoI CCATGG 1 cut(s) 169
NdeI CATATG 1 cut(s) 1645
NlaIV GGNNCC 5 cut(s) 167, 418, 435, 1248, 2047
NmuCI GTSAC 1 cut(s) 1147
NsiI ATGCAT 2 cut(s) 1414, 2203
NspI RCATGY 1 cut(s) 1876
PaeI GCATGC 1 cut(s) 1876
PagI TCATGA 4 cut(s) 124, 631, 808, 1426
PciSI GCTCTTC 3 cut(s) 758, 1161, 1890
PctI GAATGC 1 cut(s) 2356
PfeI GAWTC 7 cut(s) 1187, 1196, 1403, 1604, 1616, 1889, 2217
PflMI CCANNNNNTGG 1 cut(s) 1528
PfoI TCCNGGA 1 cut(s) 1521
PkrI GCNGC 9 cut(s) 259, 564, 741, 1701, 1746, 1749, 1793, 1878, 1999
PshBI ATTAAT 2 cut(s) 303, 752
PsiI TTATAA 1 cut(s) 1842
Psp6I CCWGG 4 cut(s) 565, 742, 1521, 1571
PspEI GGTNACC 1 cut(s) 1147
PspFI CCCAGC 1 cut(s) 2141
PspGI CCWGG 4 cut(s) 565, 742, 1521, 1571
PspN4I GGNNCC 5 cut(s) 167, 418, 435, 1248, 2047
PspPI GGNCC 3 cut(s) 166, 319, 1735
PstI CTGCAG 2 cut(s) 1195, 2002
PstNI CAGNNNCTG 2 cut(s) 1264, 1676
PsuI RGATCY 4 cut(s) 913, 1246, 1420, 2021
PvuII CAGCTG 2 cut(s) 1378, 1879
RsaI GTAC 4 cut(s) 418, 1309, 1317, 2057
RsaNI GTAC 4 cut(s) 417, 1308, 1316, 2056
RseI CAYNNNNRTG 4 cut(s) 116, 228, 230, 1648
SapI GCTCTTC 3 cut(s) 758, 1161, 1890
SaqAI TTAA 5 cut(s) 303, 575, 752, 1287, 2357
SatI GCNGC 9 cut(s) 258, 563, 740, 1700, 1745, 1748, 1792, 1877, 1998
Sau96I GGNCC 3 cut(s) 166, 319, 1735
ScrFI CCNGG 5 cut(s) 567, 646, 744, 1523, 1573
SduI GDGCHC 3 cut(s) 1039, 1657, 2048
SfaNI GCATC 1 cut(s) 1399
SfcI CTRYAG 3 cut(s) 1191, 1998, 2067
SinI GGWCC 1 cut(s) 166
SmiMI CAYNNNNRTG 4 cut(s) 116, 228, 230, 1648
SmlI CTYRAG 1 cut(s) 1488
SmoI CTYRAG 1 cut(s) 1488
SpeI ACTAGT 1 cut(s) 1928
SphI GCATGC 1 cut(s) 1876
SsiI CCGC 1 cut(s) 2317
SspMI CTAG 4 cut(s) 485, 1920, 1929, 2300
StyD4I CCNGG 5 cut(s) 565, 644, 742, 1521, 1571
StyI CCWWGG 2 cut(s) 169, 1738
TaaI ACNGT 5 cut(s) 65, 421, 517, 1471, 1905
TaqI TCGA 1 cut(s) 1500
TfiI GAWTC 7 cut(s) 1187, 1196, 1403, 1604, 1616, 1889, 2217
Tru1I TTAA 5 cut(s) 303, 575, 752, 1287, 2357
Tru9I TTAA 5 cut(s) 303, 575, 752, 1287, 2357
TscAI CASTG 3 cut(s) 459, 1483, 2374
TseFI GTSAC 1 cut(s) 1147
TseI GCWGC 9 cut(s) 257, 562, 739, 1699, 1744, 1747, 1791, 1876, 1997
Tsp45I GTSAC 1 cut(s) 1147
TspGWI ACGGA 1 cut(s) 1073
TspRI CASTG 3 cut(s) 459, 1483, 2374
Van91I CCANNNNNTGG 1 cut(s) 1528
VpaK11BI GGWCC 1 cut(s) 166
VspI ATTAAT 2 cut(s) 303, 752
XapI RAATTY 2 cut(s) 581, 2283
XceI RCATGY 1 cut(s) 1876
XspI CTAG 4 cut(s) 485, 1920, 1929, 2300
Zsp2I ATGCAT 2 cut(s) 1414, 2203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.