PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g02010 FvH4_1g02010 |
| malus_domestica | MD02G1018300.v1.1 MD15G1162300.v1.1 |
| prunus_persica | Prupe.7G257700_v2.0.a1 |
| pyrus_communis | pycom02g01640 pycom15g14590 |
| rosa_chinensis | RchiOBHm_Chr2g0087071 |
| rosa_laevigata | RLG00000015826 |
| rosa_multiflora | Rmu_sc0019099.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00140140 Rroxscaffold_2G00153920 |
| rosa_rugosa | Rorug01G0472000 Rorug01G0472100 |
| rosa_samantha | Rh2AG025400 Rh2BG025200 Rh2CG025700 Rh2DG025600 |
| rosa_wichuraiana | Rw0G022870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1839 |
| Acc65I | GGTACC | 1 cut(s) | 416 |
| AccB1I | GGYRCC | 2 cut(s) | 416, 2042 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1525 |
| AciI | CCGC | 4 cut(s) | 257, 645, 1274, 2314 |
| AclWI | GGATC | 5 cut(s) | 918, 1072, 1238, 1251, 1425 |
| AcoI | YGGCCR | 2 cut(s) | 1566, 1811 |
| AcsI | RAATTY | 2 cut(s) | 581, 2280 |
| AcuI | CTGAAG | 4 cut(s) | 377, 678, 855, 1200 |
| AfaI | GTAC | 4 cut(s) | 418, 1306, 1314, 2054 |
| AfeI | AGCGCT | 1 cut(s) | 1695 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 94, 243, 1240, 1525, 1575, 2038 |
| AhlI | ACTAGT | 1 cut(s) | 1925 |
| AjnI | CCWGG | 4 cut(s) | 565, 742, 1518, 1568 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 995, 1027, 1292, 1324, 1940, 1972 |
| Alw26I | GTCTC | 3 cut(s) | 1119, 1457, 1799 |
| AlwI | GGATC | 5 cut(s) | 918, 1072, 1238, 1251, 1425 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1261, 1673 |
| Aor51HI | AGCGCT | 1 cut(s) | 1695 |
| AoxI | GGCC | 5 cut(s) | 318, 1566, 1731, 1811, 1845 |
| ApeKI | GCWGC | 8 cut(s) | 562, 739, 1696, 1741, 1744, 1788, 1873, 1994 |
| ApoI | RAATTY | 2 cut(s) | 581, 2280 |
| AseI | ATTAAT | 2 cut(s) | 303, 752 |
| Asp718I | GGTACC | 1 cut(s) | 416 |
| AspLEI | GCGC | 1 cut(s) | 1696 |
| AspS9I | GGNCC | 3 cut(s) | 166, 319, 1732 |
| AsuHPI | GGTGA | 9 cut(s) | 517, 529, 707, 881, 908, 1028, 1087, 1138, 1148 |
| AvaII | GGWCC | 1 cut(s) | 166 |
| BaeGI | GKGCMC | 2 cut(s) | 1654, 2045 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 90, 123, 1296, 1329 |
| BalI | TGGCCA | 2 cut(s) | 1568, 1813 |
| BamHI | GGATCC | 1 cut(s) | 1243 |
| BanI | GGYRCC | 2 cut(s) | 416, 2042 |
| BanII | GRGCYC | 1 cut(s) | 1036 |
| BbsI | GAAGAC | 3 cut(s) | 666, 843, 1857 |
| BbvCI | CCTCAGC | 1 cut(s) | 924 |
| BbvI | GCAGC | 8 cut(s) | 549, 726, 1683, 1753, 1756, 1800, 1885, 1981 |
| BccI | CCATC | 8 cut(s) | 268, 1023, 1157, 1167, 1822, 1945, 1955, 2293 |
| BciT130I | CCWGG | 4 cut(s) | 567, 744, 1520, 1570 |
| BciVI | GTATCC | 2 cut(s) | 91, 300 |
| BclI | TGATCA | 1 cut(s) | 1237 |
| BcoDI | GTCTC | 3 cut(s) | 1119, 1457, 1799 |
| BcuI | ACTAGT | 1 cut(s) | 1925 |
| BfaI | CTAG | 4 cut(s) | 485, 1917, 1926, 2297 |
| BfmI | CTRYAG | 3 cut(s) | 1188, 1995, 2064 |
| BfoI | RGCGCY | 1 cut(s) | 1697 |
| BfuI | GTATCC | 2 cut(s) | 91, 300 |
| BglII | AGATCT | 1 cut(s) | 2018 |
| BisI | GCNGC | 9 cut(s) | 258, 563, 740, 1697, 1742, 1745, 1789, 1874, 1995 |
| BlpI | GCTNAGC | 1 cut(s) | 1371 |
| BlsI | GCNGC | 9 cut(s) | 259, 564, 741, 1698, 1743, 1746, 1790, 1875, 1996 |
| Bme1390I | CCNGG | 4 cut(s) | 567, 744, 1520, 1570 |
| Bme18I | GGWCC | 1 cut(s) | 166 |
| BmgT120I | GGNCC | 3 cut(s) | 166, 319, 1732 |
| BmiI | GGNNCC | 5 cut(s) | 167, 418, 435, 1245, 2044 |
| BmrFI | CCNGG | 4 cut(s) | 567, 744, 1520, 1570 |
| BmrI | ACTGGG | 1 cut(s) | 1933 |
| BmsI | GCATC | 1 cut(s) | 1396 |
| BmuI | ACTGGG | 1 cut(s) | 1933 |
| BpiI | GAAGAC | 3 cut(s) | 666, 843, 1857 |
| BpmI | CTGGAG | 1 cut(s) | 476 |
| Bpu10I | CCTNAGC | 1 cut(s) | 924 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1371 |
| BpuEI | CTTGAG | 1 cut(s) | 1470 |
| BsaBI | GATNNNNATC | 2 cut(s) | 909, 1242 |
| BsaJI | CCNNGG | 5 cut(s) | 169, 293, 566, 1569, 1735 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 94, 243, 1240, 1525, 1575, 2038 |
| Bse1I | ACTGG | 4 cut(s) | 459, 1043, 1473, 1939 |
| Bse3DI | GCAATG | 3 cut(s) | 111, 123, 1798 |
| Bse8I | GATNNNNATC | 2 cut(s) | 909, 1242 |
| BseBI | CCWGG | 4 cut(s) | 567, 744, 1520, 1570 |
| BseDI | CCNNGG | 5 cut(s) | 169, 293, 566, 1569, 1735 |
| BseGI | GGATG | 4 cut(s) | 142, 1440, 1814, 1966 |
| BseJI | GATNNNNATC | 2 cut(s) | 909, 1242 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 94, 243, 1240, 1525, 1575, 2038 |
| BseMI | GCAATG | 3 cut(s) | 111, 123, 1798 |
| BseMII | CTCAG | 9 cut(s) | 217, 395, 915, 1049, 1160, 1287, 1385, 1440, 2036 |
| BseNI | ACTGG | 4 cut(s) | 459, 1043, 1473, 1939 |
| BseRI | GAGGAG | 4 cut(s) | 189, 863, 974, 1475 |
| BseSI | GKGCMC | 2 cut(s) | 1654, 2045 |
| BseXI | GCAGC | 8 cut(s) | 549, 726, 1683, 1753, 1756, 1800, 1885, 1981 |
| BseYI | CCCAGC | 1 cut(s) | 2138 |
| BshFI | GGCC | 5 cut(s) | 320, 1568, 1733, 1813, 1847 |
| BshNI | GGYRCC | 2 cut(s) | 416, 2042 |
| BslFI | GGGAC | 2 cut(s) | 179, 583 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 94, 243, 1240, 1525, 1575, 2038 |
| BsmAI | GTCTC | 3 cut(s) | 1119, 1457, 1799 |
| BsmBI | CGTCTC | 1 cut(s) | 1119 |
| BsmFI | GGGAC | 2 cut(s) | 179, 583 |
| BsnI | GGCC | 5 cut(s) | 320, 1568, 1733, 1813, 1847 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1036, 1654, 2045 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1371 |
| Bsp19I | CCATGG | 1 cut(s) | 169 |
| BspACI | CCGC | 4 cut(s) | 257, 645, 1274, 2314 |
| BspANI | GGCC | 5 cut(s) | 320, 1568, 1733, 1813, 1847 |
| BspCNI | CTCAG | 9 cut(s) | 216, 396, 916, 1048, 1161, 1288, 1384, 1441, 2035 |
| BspHI | TCATGA | 4 cut(s) | 124, 631, 808, 1423 |
| BspLI | GGNNCC | 5 cut(s) | 167, 418, 435, 1245, 2044 |
| BspMAI | CTGCAG | 2 cut(s) | 1192, 1999 |
| BspPI | GGATC | 5 cut(s) | 918, 1072, 1238, 1251, 1425 |
| BspQI | GCTCTTC | 3 cut(s) | 758, 1158, 1887 |
| BspT107I | GGYRCC | 2 cut(s) | 416, 2042 |
| BsrDI | GCAATG | 3 cut(s) | 111, 123, 1798 |
| BsrI | ACTGG | 4 cut(s) | 459, 1043, 1473, 1939 |
| BssECI | CCNNGG | 5 cut(s) | 169, 293, 566, 1569, 1735 |
| BssT1I | CCWWGG | 2 cut(s) | 169, 1735 |
| Bst2UI | CCWGG | 4 cut(s) | 567, 744, 1520, 1570 |
| Bst4CI | ACNGT | 5 cut(s) | 65, 421, 517, 1468, 1902 |
| Bst6I | CTCTTC | 6 cut(s) | 353, 612, 758, 1158, 1887, 2188 |
| BstC8I | GCNNGC | 3 cut(s) | 1393, 1758, 1871 |
| BstDSI | CCRYGG | 1 cut(s) | 169 |
| BstEII | GGTNACC | 1 cut(s) | 1144 |
| BstF5I | GGATG | 4 cut(s) | 142, 1440, 1814, 1966 |
| BstH2I | RGCGCY | 1 cut(s) | 1697 |
| BstHHI | GCGC | 1 cut(s) | 1696 |
| BstMAI | GTCTC | 3 cut(s) | 1119, 1457, 1799 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 66, 1753, 1991, 2003, 2056 |
| BstNI | CCWGG | 4 cut(s) | 567, 744, 1520, 1570 |
| BstNSI | RCATGY | 1 cut(s) | 1873 |
| BstPI | GGTNACC | 1 cut(s) | 1144 |
| BstSCI | CCNGG | 4 cut(s) | 565, 742, 1518, 1568 |
| BstSFI | CTRYAG | 3 cut(s) | 1188, 1995, 2064 |
| BstSLI | GKGCMC | 2 cut(s) | 1654, 2045 |
| BstV1I | GCAGC | 8 cut(s) | 549, 726, 1683, 1753, 1756, 1800, 1885, 1981 |
| BstV2I | GAAGAC | 3 cut(s) | 666, 843, 1857 |
| BstX2I | RGATCY | 4 cut(s) | 910, 1243, 1417, 2018 |
| BstYI | RGATCY | 4 cut(s) | 910, 1243, 1417, 2018 |
| BsuI | GTATCC | 2 cut(s) | 91, 300 |
| BsuRI | GGCC | 5 cut(s) | 320, 1568, 1733, 1813, 1847 |
| BtgI | CCRYGG | 1 cut(s) | 169 |
| BtsCI | GGATG | 4 cut(s) | 142, 1440, 1814, 1966 |
| BtsIMutI | CAGTG | 3 cut(s) | 452, 1480, 2364 |
| Cac8I | GCNNGC | 3 cut(s) | 1393, 1758, 1871 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1261, 1673 |
| CciI | TCATGA | 4 cut(s) | 124, 631, 808, 1423 |
| CfoI | GCGC | 1 cut(s) | 1696 |
| Cfr13I | GGNCC | 3 cut(s) | 166, 319, 1732 |
| Csp6I | GTAC | 4 cut(s) | 417, 1305, 1313, 2053 |
| CviQI | GTAC | 4 cut(s) | 417, 1305, 1313, 2053 |
| DraI | TTTAAA | 2 cut(s) | 384, 2355 |
| EaeI | YGGCCR | 2 cut(s) | 1566, 1811 |
| Eam1104I | CTCTTC | 6 cut(s) | 353, 612, 758, 1158, 1887, 2188 |
| EarI | CTCTTC | 6 cut(s) | 353, 612, 758, 1158, 1887, 2188 |
| EciI | GGCGGA | 1 cut(s) | 2329 |
| Eco130I | CCWWGG | 2 cut(s) | 169, 1735 |
| Eco24I | GRGCYC | 1 cut(s) | 1036 |
| Eco47I | GGWCC | 1 cut(s) | 166 |
| Eco47III | AGCGCT | 1 cut(s) | 1695 |
| Eco57I | CTGAAG | 4 cut(s) | 377, 678, 855, 1200 |
| Eco91I | GGTNACC | 1 cut(s) | 1144 |
| EcoO65I | GGTNACC | 1 cut(s) | 1144 |
| EcoRI | GAATTC | 1 cut(s) | 2280 |
| EcoRII | CCWGG | 4 cut(s) | 565, 742, 1518, 1568 |
| EcoT14I | CCWWGG | 2 cut(s) | 169, 1735 |
| EcoT22I | ATGCAT | 2 cut(s) | 1411, 2200 |
| EcoT38I | GRGCYC | 1 cut(s) | 1036 |
| ErhI | CCWWGG | 2 cut(s) | 169, 1735 |
| Esp3I | CGTCTC | 1 cut(s) | 1119 |
| FaqI | GGGAC | 2 cut(s) | 179, 583 |
| FauNDI | CATATG | 1 cut(s) | 1642 |
| FbaI | TGATCA | 1 cut(s) | 1237 |
| Fnu4HI | GCNGC | 9 cut(s) | 258, 563, 740, 1697, 1742, 1745, 1789, 1874, 1995 |
| FokI | GGATG | 4 cut(s) | 149, 1447, 1801, 1973 |
| FriOI | GRGCYC | 1 cut(s) | 1036 |
| Fsp4HI | GCNGC | 9 cut(s) | 258, 563, 740, 1697, 1742, 1745, 1789, 1874, 1995 |
| FspBI | CTAG | 4 cut(s) | 485, 1917, 1926, 2297 |
| GlaI | GCGC | 1 cut(s) | 1695 |
| GluI | GCNGC | 9 cut(s) | 258, 563, 740, 1697, 1742, 1745, 1789, 1874, 1995 |
| GsaI | CCCAGC | 1 cut(s) | 2142 |
| GsuI | CTGGAG | 1 cut(s) | 476 |
| HaeII | RGCGCY | 1 cut(s) | 1697 |
| HaeIII | GGCC | 5 cut(s) | 320, 1568, 1733, 1813, 1847 |
| HhaI | GCGC | 1 cut(s) | 1696 |
| Hin6I | GCGC | 1 cut(s) | 1694 |
| HinP1I | GCGC | 1 cut(s) | 1694 |
| HindIII | AAGCTT | 1 cut(s) | 1280 |
| HinfI | GANTC | 7 cut(s) | 1184, 1193, 1400, 1601, 1613, 1886, 2214 |
| HphI | GGTGA | 9 cut(s) | 517, 529, 707, 881, 908, 1028, 1087, 1138, 1148 |
| Hpy166II | GTNNAC | 3 cut(s) | 1315, 1561, 1910 |
| Hpy8I | GTNNAC | 3 cut(s) | 1315, 1561, 1910 |
| HpyCH4III | ACNGT | 5 cut(s) | 65, 421, 517, 1468, 1902 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 66, 1753, 1991, 2003, 2056 |
| HspAI | GCGC | 1 cut(s) | 1694 |
| KpnI | GGTACC | 1 cut(s) | 420 |
| Ksp22I | TGATCA | 1 cut(s) | 1237 |
| LguI | GCTCTTC | 3 cut(s) | 758, 1158, 1887 |
| LmnI | GCTCC | 3 cut(s) | 176, 1292, 1529 |
| Lsp1109I | GCAGC | 8 cut(s) | 549, 726, 1683, 1753, 1756, 1800, 1885, 1981 |
| LweI | GCATC | 1 cut(s) | 1396 |
| MaeI | CTAG | 4 cut(s) | 485, 1917, 1926, 2297 |
| MaeIII | GTNAC | 3 cut(s) | 328, 1144, 1468 |
| MfeI | CAATTG | 1 cut(s) | 1546 |
| MflI | RGATCY | 4 cut(s) | 910, 1243, 1417, 2018 |
| MhlI | GDGCHC | 3 cut(s) | 1036, 1654, 2045 |
| MlsI | TGGCCA | 2 cut(s) | 1568, 1813 |
| MluNI | TGGCCA | 2 cut(s) | 1568, 1813 |
| MmeI | TCCRAC | 4 cut(s) | 372, 572, 1946, 2174 |
| Mox20I | TGGCCA | 2 cut(s) | 1568, 1813 |
| Mph1103I | ATGCAT | 2 cut(s) | 1411, 2200 |
| MscI | TGGCCA | 2 cut(s) | 1568, 1813 |
| MseI | TTAA | 7 cut(s) | 303, 383, 575, 752, 1116, 1284, 2354 |
| MslI | CAYNNNNRTG | 4 cut(s) | 116, 228, 230, 1645 |
| Msp20I | TGGCCA | 2 cut(s) | 1568, 1813 |
| MspA1I | CMGCKG | 2 cut(s) | 1375, 1876 |
| MspR9I | CCNGG | 4 cut(s) | 567, 744, 1520, 1570 |
| MunI | CAATTG | 1 cut(s) | 1546 |
| MvaI | CCWGG | 4 cut(s) | 567, 744, 1520, 1570 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 66, 1753, 1991, 2003, 2056 |
| NcoI | CCATGG | 1 cut(s) | 169 |
| NdeI | CATATG | 1 cut(s) | 1642 |
| NlaIV | GGNNCC | 5 cut(s) | 167, 418, 435, 1245, 2044 |
| NmuCI | GTSAC | 1 cut(s) | 1144 |
| NsiI | ATGCAT | 2 cut(s) | 1411, 2200 |
| NspI | RCATGY | 1 cut(s) | 1873 |
| PaeI | GCATGC | 1 cut(s) | 1873 |
| PagI | TCATGA | 4 cut(s) | 124, 631, 808, 1423 |
| PciSI | GCTCTTC | 3 cut(s) | 758, 1158, 1887 |
| PfeI | GAWTC | 7 cut(s) | 1184, 1193, 1400, 1601, 1613, 1886, 2214 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1525 |
| PfoI | TCCNGGA | 1 cut(s) | 1518 |
| PkrI | GCNGC | 9 cut(s) | 259, 564, 741, 1698, 1743, 1746, 1790, 1875, 1996 |
| PshBI | ATTAAT | 2 cut(s) | 303, 752 |
| PsiI | TTATAA | 1 cut(s) | 1839 |
| Psp6I | CCWGG | 4 cut(s) | 565, 742, 1518, 1568 |
| PspEI | GGTNACC | 1 cut(s) | 1144 |
| PspFI | CCCAGC | 1 cut(s) | 2138 |
| PspGI | CCWGG | 4 cut(s) | 565, 742, 1518, 1568 |
| PspN4I | GGNNCC | 5 cut(s) | 167, 418, 435, 1245, 2044 |
| PspPI | GGNCC | 3 cut(s) | 166, 319, 1732 |
| PstI | CTGCAG | 2 cut(s) | 1192, 1999 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1261, 1673 |
| PsuI | RGATCY | 4 cut(s) | 910, 1243, 1417, 2018 |
| PvuII | CAGCTG | 2 cut(s) | 1375, 1876 |
| RsaI | GTAC | 4 cut(s) | 418, 1306, 1314, 2054 |
| RsaNI | GTAC | 4 cut(s) | 417, 1305, 1313, 2053 |
| RseI | CAYNNNNRTG | 4 cut(s) | 116, 228, 230, 1645 |
| SapI | GCTCTTC | 3 cut(s) | 758, 1158, 1887 |
| SaqAI | TTAA | 7 cut(s) | 303, 383, 575, 752, 1116, 1284, 2354 |
| SatI | GCNGC | 9 cut(s) | 258, 563, 740, 1697, 1742, 1745, 1789, 1874, 1995 |
| Sau96I | GGNCC | 3 cut(s) | 166, 319, 1732 |
| ScrFI | CCNGG | 4 cut(s) | 567, 744, 1520, 1570 |
| SduI | GDGCHC | 3 cut(s) | 1036, 1654, 2045 |
| SfaNI | GCATC | 1 cut(s) | 1396 |
| SfcI | CTRYAG | 3 cut(s) | 1188, 1995, 2064 |
| SinI | GGWCC | 1 cut(s) | 166 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 116, 228, 230, 1645 |
| SmlI | CTYRAG | 1 cut(s) | 1485 |
| SmoI | CTYRAG | 1 cut(s) | 1485 |
| SpeI | ACTAGT | 1 cut(s) | 1925 |
| SphI | GCATGC | 1 cut(s) | 1873 |
| SsiI | CCGC | 4 cut(s) | 257, 645, 1274, 2314 |
| SspMI | CTAG | 4 cut(s) | 485, 1917, 1926, 2297 |
| StyD4I | CCNGG | 4 cut(s) | 565, 742, 1518, 1568 |
| StyI | CCWWGG | 2 cut(s) | 169, 1735 |
| TaaI | ACNGT | 5 cut(s) | 65, 421, 517, 1468, 1902 |
| TaqI | TCGA | 1 cut(s) | 1497 |
| TauI | GCSGC | 1 cut(s) | 260 |
| TfiI | GAWTC | 7 cut(s) | 1184, 1193, 1400, 1601, 1613, 1886, 2214 |
| Tru1I | TTAA | 7 cut(s) | 303, 383, 575, 752, 1116, 1284, 2354 |
| Tru9I | TTAA | 7 cut(s) | 303, 383, 575, 752, 1116, 1284, 2354 |
| TscAI | CASTG | 3 cut(s) | 459, 1480, 2371 |
| TseFI | GTSAC | 1 cut(s) | 1144 |
| TseI | GCWGC | 8 cut(s) | 562, 739, 1696, 1741, 1744, 1788, 1873, 1994 |
| Tsp45I | GTSAC | 1 cut(s) | 1144 |
| TspGWI | ACGGA | 1 cut(s) | 1070 |
| TspRI | CASTG | 3 cut(s) | 459, 1480, 2371 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1525 |
| VpaK11BI | GGWCC | 1 cut(s) | 166 |
| VspI | ATTAAT | 2 cut(s) | 303, 752 |
| XapI | RAATTY | 2 cut(s) | 581, 2280 |
| XceI | RCATGY | 1 cut(s) | 1873 |
| XspI | CTAG | 4 cut(s) | 485, 1917, 1926, 2297 |
| Zsp2I | ATGCAT | 2 cut(s) | 1411, 2200 |