Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015403

Physical Location & Seq

Genomic Coordinates Reverse (-)

17763361 .. 17765587

Gene Structure 2227 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48044

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1281 bp

ATGAAATTCAAACTTCCCAATCTACCCCTCTCCTCCCTCAAAACCCTTCCCCTAAAACCCAAGTCCCAAATGGCCTCACTTCTCACCGCCGCCGAGCCCCAAACCCGAATTCCTCACCCGTCGGAAGACCTCGATGACGTCCTCTGCTCCGCCCAGCAACTAGCAGAGCAGCAGCAGTTGGATTTGGCTGAAACGGCGCCGCTTCGGAGCCTGAGCGGCGAGTCGCGAATTGAGCGAGCATGGGCTCACTGGACGAAGCTGGGCCGGCCCAAGTTGATCGTGGCTCCGATGGTGGACAACTCCGAGCTCCCGTTTCGGATGCTCTGCCGCAAGTACGGTGCCGACGCTGCCTACACGCCCATGCTTCACTCTCGGATTTTTACCGAGACCGAGAAGTATCGGAACCAAGAATTTACCACTTGCAAGGAGGATCGTCCGTTGTTTGTTCAATTCTGTGCTAATGATCCTGAGGTTTTACTGGAAGCTGCAAAGAGAGTGGAGCCGTACTGTGATTATGTTGACATTAATTTGGGGTGTCCTCAGCGAATTGCCAGGCGGGGGAACTATGGAGCTTTTCTGATGGATAAGCTTCCTCTTGTAAAATCTCTAGTAGAAAACTTGGTTGCAAATCTTTATGTCCCCGTTTCATGCAAAATCCGTATCTTCCCGAACTTGGATGATACAATTCAGTATGCTAGGATGCTAGAGGATGCCGGTTGCTCTCTTTTAGCCGTCCATGGCCGAACAAGAGACGAGAAAGACCAGAAGAAAGTGCGGGCCAACTGGGATGCCATCAAGGCTGTGAAGAATTCTGTCAAAATACCTGTGATTGCCAATGGGAACATAAGGCACCTGGATGATGCGCACGACTGTTTGAAATACACAGGTGCTGATGGGGTACTCTCTGCTGAGTCTCTTCTTGAAAATCCAGCACTTTTTGCTGGTTTTCGAACGGCTGAATGGGTTGAGGAGGGTGAAGAATGCAATAAAGATCGGAAACTGGACCAGGCAGATCTTTTGGTGGAGTATCTGAAGCTTTGTGAACAATACCCTGTACCTTGGCGTATGATTCGTGCTCATGTGCACAAGATGCTGGGAGACTGGTTCAGAATGCATCCACATGTAAGAGAAGATTTTAATGCACAGCACATTCTCACTTTTGAGTTTCTCTATAACATGGTGGATCGGCTTAGAGAGCTGGGTAAAGGAACTCCCCTTCATCTTAAGGATACTAATGGTGCAAGTATCGCAGCGAATGGGCTGGCTGTGTCAGCTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002943 GO:0003674 GO:0003824 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016491 GO:0016627 GO:0017150 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0055114 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dus

Protein Analysis

426

Amino Acids

48.32

Weight (kDa)

6.65

Isoelectric Point (pI)

30.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dus	PF01207	94 - 379	1.6e-77	Dihydrouridine synthase (Dus)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67220
fragaria_vesca	FvH4_1g16470
malus_domestica	MD02G1177400.v1.1 MD15G1287200.v1.1
prunus_persica	Prupe.6G230700_v2.0.a1
pyrus_communis	pycom15g25070
rosa_chinensis	RchiOBHm_Chr2g0106351
rosa_laevigata	RLG00000017491
rosa_multiflora	Rmu_sc0010122.1_g000004
rosa_roxburghii	Rroxscaffold_2G00137260
rosa_rugosa	Rorug02G0134900
rosa_samantha	Rh2AG186000 Rh2BG196200 Rh2CG191000 Rh2DG192100
rosa_wichuraiana	Rw2G014500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	141
Acc16I	TGCGCA	1 cut(s)	864
AccB1I	GGYRCC	3 cut(s)	196, 338, 849
AccBSI	CCGCTC	1 cut(s)	216
AccII	CGCG	1 cut(s)	226
AciI	CCGC	8 cut(s)	87, 90, 150, 200, 216, 328, 556, 775
AclWI	GGATC	3 cut(s)	438, 458, 1191
AcoI	YGGCCR	1 cut(s)	739
AcsI	RAATTY	4 cut(s)	5, 108, 410, 808
AcuI	CTGAAG	1 cut(s)	1052
AcyI	GRCGYC	2 cut(s)	138, 197
AfaI	GTAC	4 cut(s)	335, 506, 900, 1056
AfiI	CCNNNNNNNGG	2 cut(s)	558, 673
AflII	CTTAAG	1 cut(s)	1223
AflIII	ACRYGT	1 cut(s)	1120
AgsI	TTSAA	4 cut(s)	10, 449, 877, 923
AjnI	CCWGG	3 cut(s)	551, 852, 1005
AjuI	GAANNNNNNNTTGG	2 cut(s)	93, 125
AluBI	AGCT	8 cut(s)	259, 307, 485, 572, 589, 1036, 1198, 1274
AluI	AGCT	8 cut(s)	259, 307, 485, 572, 589, 1036, 1198, 1274
Alw21I	GWGCWC	3 cut(s)	309, 1078, 1086
Alw26I	GTCTC	4 cut(s)	380, 744, 918, 1092
Alw44I	GTGCAC	1 cut(s)	1082
AlwI	GGATC	3 cut(s)	438, 458, 1191
AlwNI	CAGNNNCTG	1 cut(s)	890
AoxI	GGCC	5 cut(s)	72, 262, 266, 739, 777
ApaLI	GTGCAC	1 cut(s)	1082
ApeKI	GCWGC	5 cut(s)	169, 172, 347, 485, 1250
ApoI	RAATTY	4 cut(s)	5, 108, 410, 808
AseI	ATTAAT	1 cut(s)	525
AspLEI	GCGC	2 cut(s)	199, 865
AspS9I	GGNCC	4 cut(s)	262, 267, 777, 1003
AsuHPI	GGTGA	3 cut(s)	76, 107, 986
AsuII	TTCGAA	1 cut(s)	949
AvaII	GGWCC	1 cut(s)	1003
AxyI	CCTNAGG	1 cut(s)	468
BaeGI	GKGCMC	1 cut(s)	1086
BanI	GGYRCC	3 cut(s)	196, 338, 849
BanII	GRGCYC	3 cut(s)	99, 247, 309
BbsI	GAAGAC	1 cut(s)	132
Bbv12I	GWGCWC	3 cut(s)	309, 1078, 1086
BbvCI	CCTCAGC	1 cut(s)	540
BbvI	GCAGC	5 cut(s)	181, 184, 334, 472, 1262
BccI	CCATC	4 cut(s)	283, 574, 800, 887
BceAI	ACGGC	4 cut(s)	210, 487, 716, 969
BciT130I	CCWGG	3 cut(s)	553, 854, 1007
BciVI	GTATCC	1 cut(s)	1222
BcoDI	GTCTC	4 cut(s)	380, 744, 918, 1092
BfaI	CTAG	4 cut(s)	161, 608, 696, 704
BfoI	RGCGCY	1 cut(s)	200
BfrI	CTTAAG	1 cut(s)	1223
BfuI	GTATCC	1 cut(s)	1222
BglI	GCCNNNNNGGC	2 cut(s)	216, 797
BglII	AGATCT	1 cut(s)	1012
BisI	GCNGC	9 cut(s)	90, 170, 173, 200, 217, 328, 348, 486, 1251
BlsI	GCNGC	9 cut(s)	91, 171, 174, 201, 218, 329, 349, 487, 1252
Bme1390I	CCNGG	3 cut(s)	553, 854, 1007
Bme18I	GGWCC	1 cut(s)	1003
BmgT120I	GGNCC	4 cut(s)	262, 267, 777, 1003
BmiI	GGNNCC	7 cut(s)	198, 209, 285, 340, 404, 501, 851
BmrFI	CCNGG	3 cut(s)	553, 854, 1007
BmrI	ACTGGG	1 cut(s)	793
BmsI	GCATC	7 cut(s)	309, 690, 700, 778, 850, 1080, 1123
BmuI	ACTGGG	1 cut(s)	793
BpiI	GAAGAC	1 cut(s)	132
Bpu10I	CCTNAGC	2 cut(s)	212, 540
Bpu14I	TTCGAA	1 cut(s)	949
BsaHI	GRCGYC	2 cut(s)	138, 197
BsaI	GGTCTC	1 cut(s)	380
BsaJI	CCNNGG	2 cut(s)	736, 1058
Bsc4I	CCNNNNNNNGG	2 cut(s)	558, 673
Bse118I	RCCGGY	2 cut(s)	264, 713
Bse1I	ACTGG	5 cut(s)	254, 483, 788, 1005, 1106
Bse21I	CCTNAGG	1 cut(s)	468
BseBI	CCWGG	3 cut(s)	553, 854, 1007
BseDI	CCNNGG	2 cut(s)	736, 1058
BseGI	GGATG	7 cut(s)	324, 682, 705, 715, 793, 862, 1114
BseLI	CCNNNNNNNGG	2 cut(s)	558, 673
BseMII	CTCAG	4 cut(s)	203, 459, 554, 900
BseNI	ACTGG	5 cut(s)	254, 483, 788, 1005, 1106
BseRI	GAGGAG	2 cut(s)	22, 983
BseSI	GKGCMC	1 cut(s)	1086
BseXI	GCAGC	5 cut(s)	181, 184, 334, 472, 1262
BseYI	CCCAGC	4 cut(s)	153, 259, 1093, 1198
Bsh1236I	CGCG	1 cut(s)	226
BshFI	GGCC	5 cut(s)	74, 264, 268, 741, 779
BshNI	GGYRCC	3 cut(s)	196, 338, 849
BsiHKAI	GWGCWC	3 cut(s)	309, 1078, 1086
BsiSI	CCGG	2 cut(s)	265, 714
BslFI	GGGAC	2 cut(s)	49, 623
BslI	CCNNNNNNNGG	2 cut(s)	558, 673
BsmAI	GTCTC	4 cut(s)	380, 744, 918, 1092
BsmBI	CGTCTC	1 cut(s)	744
BsmFI	GGGAC	2 cut(s)	49, 623
BsmI	GAATGC	2 cut(s)	986, 1116
BsnI	GGCC	5 cut(s)	74, 264, 268, 741, 779
Bso31I	GGTCTC	1 cut(s)	380
Bsp119I	TTCGAA	1 cut(s)	949
Bsp1286I	GDGCHC	5 cut(s)	99, 247, 309, 1078, 1086
Bsp143I	GATC	6 cut(s)	276, 430, 463, 991, 1012, 1183
Bsp19I	CCATGG	1 cut(s)	736
Bsp68I	TCGCGA	1 cut(s)	226
BspACI	CCGC	8 cut(s)	87, 90, 150, 200, 216, 328, 556, 775
BspANI	GGCC	5 cut(s)	74, 264, 268, 741, 779
BspCNI	CTCAG	4 cut(s)	204, 460, 553, 901
BspFNI	CGCG	1 cut(s)	226
BspLI	GGNNCC	7 cut(s)	198, 209, 285, 340, 404, 501, 851
BspPI	GGATC	3 cut(s)	438, 458, 1191
BspT104I	TTCGAA	1 cut(s)	949
BspT107I	GGYRCC	3 cut(s)	196, 338, 849
BspTI	CTTAAG	1 cut(s)	1223
BspTNI	GGTCTC	1 cut(s)	380
BsrBI	CCGCTC	1 cut(s)	216
BsrFI	RCCGGY	2 cut(s)	264, 713
BsrI	ACTGG	5 cut(s)	254, 483, 788, 1005, 1106
BssAI	RCCGGY	2 cut(s)	264, 713
BssECI	CCNNGG	2 cut(s)	736, 1058
BssMI	GATC	6 cut(s)	276, 430, 463, 991, 1012, 1183
BssNI	GRCGYC	2 cut(s)	138, 197
BssT1I	CCWWGG	2 cut(s)	736, 1058
Bst2UI	CCWGG	3 cut(s)	553, 854, 1007
Bst4CI	ACNGT	3 cut(s)	338, 509, 872
Bst6I	CTCTTC	1 cut(s)	921
BstACI	GRCGYC	2 cut(s)	138, 197
BstAFI	CTTAAG	1 cut(s)	1223
BstAPI	GCANNNNNTGC	2 cut(s)	938, 1090
BstBI	TTCGAA	1 cut(s)	949
BstC8I	GCNNGC	4 cut(s)	237, 266, 777, 1263
BstDEI	CTNAG	5 cut(s)	212, 468, 540, 909, 1190
BstDSI	CCRYGG	1 cut(s)	736
BstF5I	GGATG	7 cut(s)	324, 682, 705, 715, 793, 862, 1114
BstFNI	CGCG	1 cut(s)	226
BstH2I	RGCGCY	1 cut(s)	200
BstHHI	GCGC	2 cut(s)	199, 865
BstKTI	GATC	6 cut(s)	279, 433, 466, 994, 1015, 1186
BstMAI	GTCTC	4 cut(s)	380, 744, 918, 1092
BstMBI	GATC	6 cut(s)	276, 430, 463, 991, 1012, 1183
BstNI	CCWGG	3 cut(s)	553, 854, 1007
BstNSI	RCATGY	1 cut(s)	1124
BstSCI	CCNGG	3 cut(s)	551, 852, 1005
BstSLI	GKGCMC	1 cut(s)	1086
BstUI	CGCG	1 cut(s)	226
BstV1I	GCAGC	5 cut(s)	181, 184, 334, 472, 1262
BstV2I	GAAGAC	1 cut(s)	132
BstX2I	RGATCY	1 cut(s)	1012
BstYI	RGATCY	1 cut(s)	1012
Bsu36I	CCTNAGG	1 cut(s)	468
BsuI	GTATCC	1 cut(s)	1222
BsuRI	GGCC	5 cut(s)	74, 264, 268, 741, 779
BtgI	CCRYGG	1 cut(s)	736
BtsCI	GGATG	7 cut(s)	324, 682, 705, 715, 793, 862, 1114
BtsIMutI	CAGTG	1 cut(s)	247
BtuMI	TCGCGA	1 cut(s)	226
Cac8I	GCNNGC	4 cut(s)	237, 266, 777, 1263
CaiI	CAGNNNCTG	1 cut(s)	890
CfoI	GCGC	2 cut(s)	199, 865
Cfr10I	RCCGGY	2 cut(s)	264, 713
Cfr13I	GGNCC	4 cut(s)	262, 267, 777, 1003
CseI	GACGC	1 cut(s)	353
Csp6I	GTAC	4 cut(s)	334, 505, 899, 1055
CspCI	CAANNNNNGTGG	2 cut(s)	477, 512
CviAII	CATG	7 cut(s)	240, 361, 648, 737, 1079, 1121, 1177
CviQI	GTAC	4 cut(s)	334, 505, 899, 1055
DdeI	CTNAG	5 cut(s)	212, 468, 540, 909, 1190
DinI	GGCGCC	1 cut(s)	198
DpnI	GATC	6 cut(s)	278, 432, 465, 993, 1014, 1185
DpnII	GATC	6 cut(s)	276, 430, 463, 991, 1012, 1183
EaeI	YGGCCR	1 cut(s)	739
Eam1104I	CTCTTC	1 cut(s)	921
EarI	CTCTTC	1 cut(s)	921
EciI	GGCGGA	1 cut(s)	139
Ecl136II	GAGCTC	1 cut(s)	307
Eco130I	CCWWGG	2 cut(s)	736, 1058
Eco24I	GRGCYC	3 cut(s)	99, 247, 309
Eco31I	GGTCTC	1 cut(s)	380
Eco47I	GGWCC	1 cut(s)	1003
Eco53kI	GAGCTC	1 cut(s)	307
Eco57I	CTGAAG	1 cut(s)	1052
Eco81I	CCTNAGG	1 cut(s)	468
EcoICRI	GAGCTC	1 cut(s)	307
EcoRI	GAATTC	2 cut(s)	108, 808
EcoRII	CCWGG	3 cut(s)	551, 852, 1005
EcoT14I	CCWWGG	2 cut(s)	736, 1058
EcoT22I	ATGCAT	1 cut(s)	1116
EcoT38I	GRGCYC	3 cut(s)	99, 247, 309
EgeI	GGCGCC	1 cut(s)	198
EheI	GGCGCC	1 cut(s)	198
ErhI	CCWWGG	2 cut(s)	736, 1058
Esp3I	CGTCTC	1 cut(s)	744
FaeI	CATG	7 cut(s)	243, 364, 651, 740, 1082, 1124, 1180
FaqI	GGGAC	2 cut(s)	49, 623
FatI	CATG	7 cut(s)	239, 360, 647, 736, 1078, 1120, 1176
FauI	CCCGC	2 cut(s)	549, 768
Fnu4HI	GCNGC	9 cut(s)	90, 170, 173, 200, 217, 328, 348, 486, 1251
FokI	GGATG	7 cut(s)	331, 689, 712, 722, 800, 869, 1101
FriOI	GRGCYC	3 cut(s)	99, 247, 309
FseI	GGCCGGCC	1 cut(s)	268
Fsp4HI	GCNGC	9 cut(s)	90, 170, 173, 200, 217, 328, 348, 486, 1251
FspAI	RTGCGCAY	1 cut(s)	864
FspBI	CTAG	4 cut(s)	161, 608, 696, 704
FspI	TGCGCA	1 cut(s)	864
GlaI	GCGC	2 cut(s)	198, 864
GluI	GCNGC	9 cut(s)	90, 170, 173, 200, 217, 328, 348, 486, 1251
GsaI	CCCAGC	4 cut(s)	157, 263, 1097, 1202
HaeII	RGCGCY	1 cut(s)	200
HaeIII	GGCC	5 cut(s)	74, 264, 268, 741, 779
HapII	CCGG	2 cut(s)	265, 714
HgaI	GACGC	1 cut(s)	353
HhaI	GCGC	2 cut(s)	199, 865
Hin1I	GRCGYC	2 cut(s)	138, 197
Hin1II	CATG	7 cut(s)	243, 364, 651, 740, 1082, 1124, 1180
Hin6I	GCGC	2 cut(s)	197, 863
HinP1I	GCGC	2 cut(s)	197, 863
HincII	GTYRAC	1 cut(s)	520
HindII	GTYRAC	1 cut(s)	520
HindIII	AAGCTT	2 cut(s)	587, 1034
HinfI	GANTC	3 cut(s)	221, 911, 1069
HpaII	CCGG	2 cut(s)	265, 714
HphI	GGTGA	3 cut(s)	76, 107, 986
Hpy166II	GTNNAC	4 cut(s)	295, 520, 1043, 1084
Hpy188III	TCNNGA	4 cut(s)	225, 467, 667, 920
Hpy8I	GTNNAC	4 cut(s)	295, 520, 1043, 1084
Hpy99I	CGWCG	2 cut(s)	124, 347
HpyAV	CCTTC	2 cut(s)	56, 1226
HpyCH4III	ACNGT	3 cut(s)	338, 509, 872
HpyCH4IV	ACGT	1 cut(s)	138
HpyCH4V	TGCA	9 cut(s)	423, 488, 626, 651, 984, 1084, 1114, 1142, 1241
HpyF3I	CTNAG	5 cut(s)	212, 468, 540, 909, 1190
HpySE526I	ACGT	1 cut(s)	138
Hsp92I	GRCGYC	2 cut(s)	138, 197
Hsp92II	CATG	7 cut(s)	243, 364, 651, 740, 1082, 1124, 1180
HspAI	GCGC	2 cut(s)	197, 863
KasI	GGCGCC	1 cut(s)	196
KroI	GCCGGC	1 cut(s)	264
KroNI	GCCGGC	1 cut(s)	266
Kzo9I	GATC	6 cut(s)	276, 430, 463, 991, 1012, 1183
LmnI	GCTCC	6 cut(s)	152, 207, 289, 312, 499, 569
Lsp1109I	GCAGC	5 cut(s)	181, 184, 334, 472, 1262
LweI	GCATC	7 cut(s)	309, 690, 700, 778, 850, 1080, 1123
MaeI	CTAG	4 cut(s)	161, 608, 696, 704
MaeII	ACGT	1 cut(s)	138
MalI	GATC	6 cut(s)	278, 432, 465, 993, 1014, 1185
MbiI	CCGCTC	1 cut(s)	216
MboI	GATC	6 cut(s)	276, 430, 463, 991, 1012, 1183
MboII	GAAGA	7 cut(s)	137, 655, 778, 817, 908, 989, 1142
MflI	RGATCY	1 cut(s)	1012
MhlI	GDGCHC	5 cut(s)	99, 247, 309, 1078, 1086
MluCI	AATT	9 cut(s)	5, 108, 228, 410, 449, 526, 546, 684, 808
Mly113I	GGCGCC	1 cut(s)	197
MlyI	GAGTC	2 cut(s)	230, 920
MmeI	TCCRAC	2 cut(s)	102, 159
Mph1103I	ATGCAT	1 cut(s)	1116
MroNI	GCCGGC	1 cut(s)	264
MseI	TTAA	3 cut(s)	525, 1137, 1224
MslI	CAYNNNNRTG	3 cut(s)	359, 855, 1119
MspA1I	CMGCKG	1 cut(s)	1274
MspCI	CTTAAG	1 cut(s)	1223
MspI	CCGG	2 cut(s)	265, 714
MspR9I	CCNGG	3 cut(s)	553, 854, 1007
Mva1269I	GAATGC	2 cut(s)	986, 1116
MvaI	CCWGG	3 cut(s)	553, 854, 1007
MvnI	CGCG	1 cut(s)	226
NaeI	GCCGGC	1 cut(s)	266
NarI	GGCGCC	1 cut(s)	197
NcoI	CCATGG	1 cut(s)	736
NdeII	GATC	6 cut(s)	276, 430, 463, 991, 1012, 1183
NgoMIV	GCCGGC	1 cut(s)	264
NlaIII	CATG	7 cut(s)	243, 364, 651, 740, 1082, 1124, 1180
NlaIV	GGNNCC	7 cut(s)	198, 209, 285, 340, 404, 501, 851
NmeAIII	GCCGAG	1 cut(s)	118
NruI	TCGCGA	1 cut(s)	226
NsbI	TGCGCA	1 cut(s)	864
NsiI	ATGCAT	1 cut(s)	1116
NspI	RCATGY	1 cut(s)	1124
NspV	TTCGAA	1 cut(s)	949
PciI	ACATGT	1 cut(s)	1120
PctI	GAATGC	2 cut(s)	986, 1116
PdiI	GCCGGC	1 cut(s)	266
PfeI	GAWTC	1 cut(s)	1069
PkrI	GCNGC	9 cut(s)	91, 171, 174, 201, 218, 329, 349, 487, 1252
PleI	GAGTC	2 cut(s)	229, 919
PluTI	GGCGCC	1 cut(s)	200
PpsI	GAGTC	2 cut(s)	229, 919
PscI	ACATGT	1 cut(s)	1120
PshBI	ATTAAT	1 cut(s)	525
Psp124BI	GAGCTC	1 cut(s)	309
Psp6I	CCWGG	3 cut(s)	551, 852, 1005
PspFI	CCCAGC	4 cut(s)	153, 259, 1093, 1198
PspGI	CCWGG	3 cut(s)	551, 852, 1005
PspN4I	GGNNCC	7 cut(s)	198, 209, 285, 340, 404, 501, 851
PspPI	GGNCC	4 cut(s)	262, 267, 777, 1003
PstNI	CAGNNNCTG	1 cut(s)	890
PsuI	RGATCY	1 cut(s)	1012
PvuII	CAGCTG	1 cut(s)	1274
RigI	GGCCGGCC	1 cut(s)	268
RruI	TCGCGA	1 cut(s)	226
RsaI	GTAC	4 cut(s)	335, 506, 900, 1056
RsaNI	GTAC	4 cut(s)	334, 505, 899, 1055
RseI	CAYNNNNRTG	3 cut(s)	359, 855, 1119
SacI	GAGCTC	1 cut(s)	309
SaqAI	TTAA	3 cut(s)	525, 1137, 1224
SatI	GCNGC	9 cut(s)	90, 170, 173, 200, 217, 328, 348, 486, 1251
Sau3AI	GATC	6 cut(s)	276, 430, 463, 991, 1012, 1183
Sau96I	GGNCC	4 cut(s)	262, 267, 777, 1003
SchI	GAGTC	2 cut(s)	230, 920
ScrFI	CCNGG	3 cut(s)	553, 854, 1007
SduI	GDGCHC	5 cut(s)	99, 247, 309, 1078, 1086
SfaNI	GCATC	7 cut(s)	309, 690, 700, 778, 850, 1080, 1123
SfoI	GGCGCC	1 cut(s)	198
SfuI	TTCGAA	1 cut(s)	949
SinI	GGWCC	1 cut(s)	1003
SmiMI	CAYNNNNRTG	3 cut(s)	359, 855, 1119
SmlI	CTYRAG	1 cut(s)	1223
SmoI	CTYRAG	1 cut(s)	1223
Sse9I	AATT	9 cut(s)	5, 108, 228, 410, 449, 526, 546, 684, 808
SsiI	CCGC	8 cut(s)	87, 90, 150, 200, 216, 328, 556, 775
SspDI	GGCGCC	1 cut(s)	196
SspMI	CTAG	4 cut(s)	161, 608, 696, 704
SstI	GAGCTC	1 cut(s)	309
StyD4I	CCNGG	3 cut(s)	551, 852, 1005
StyI	CCWWGG	2 cut(s)	736, 1058
TaaI	ACNGT	3 cut(s)	338, 509, 872
TaiI	ACGT	1 cut(s)	141
TaqI	TCGA	2 cut(s)	132, 949
TaqII	GACCGA	1 cut(s)	404
TasI	AATT	9 cut(s)	5, 108, 228, 410, 449, 526, 546, 684, 808
TauI	GCSGC	4 cut(s)	92, 202, 219, 330
TfiI	GAWTC	1 cut(s)	1069
Tru1I	TTAA	3 cut(s)	525, 1137, 1224
Tru9I	TTAA	3 cut(s)	525, 1137, 1224
TscAI	CASTG	1 cut(s)	254
TseI	GCWGC	5 cut(s)	169, 172, 347, 485, 1250
TspDTI	ATGAA	3 cut(s)	17, 636, 1208
TspGWI	ACGGA	2 cut(s)	426, 647
TspRI	CASTG	1 cut(s)	254
Vha464I	CTTAAG	1 cut(s)	1223
VneI	GTGCAC	1 cut(s)	1082
VpaK11BI	GGWCC	1 cut(s)	1003
VspI	ATTAAT	1 cut(s)	525
XapI	RAATTY	4 cut(s)	5, 108, 410, 808
XceI	RCATGY	1 cut(s)	1124
XcmI	CCANNNNNNNNNTGG	2 cut(s)	67, 277
XspI	CTAG	4 cut(s)	161, 608, 696, 704
ZraI	GACGTC	1 cut(s)	139
Zsp2I	ATGCAT	1 cut(s)	1116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.