Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0015403

Physical Location & Seq

Genomic Coordinates Reverse (-)

17439363 .. 17440905

Gene Structure 1543 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG192100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1221 bp

ATGGCCTCACTTCTCACCGCCGCCGAGCCCCAAACCCGAATTCCTCACCCGTCGGAAGACCTCGATGACGCCCTTTGCTCCGCCCAGCAACAGCAGCAACTAGCAGAGCAGCAGCAGTTGGATTTGGCTGAAACGGCGCCGTTTCGGAGCTTGAGCGGGGAGTCGCGAATTGAGCGAGCATGGGCTCACTGGACGAAGCTGGGCCGGCCCAAGCTGATCGTGGCTCCGATGGTGGACAACTCCGAGCTCCCGTTTCGGATGCTCTGCCGCAAGTACGGCGCCGACGCTGCCTACACGCCCATGCTTCACTCTCGGATTTTTACCGAGACTGAGAAGTATCGGAACCAAGAATTTACCACTTGCAAGGAGGATCGTCCGTTGTTTGTTCAATTCTGTGCTAATGATCCTGAGGTTTTACTGGAAGCTGCAAAGAGAGTGGAGCCTTACTGTGATTATGTTGACATTAATTTGGGGTGTCCTCAGCGAATTGCCAGGCGGGGGAACTATGGAGCTTTTCTGATGGATAAGCTTCCTCTTGTAAAATCTCTAGTAGAAAACTTGGTTGCAAATCTTTATGTCCCCGTTTCATGCAAAATCCGTATCTTCCCGAACTTGGATGATACAATTCAGTATGCTAGGATGCTAGAGGATGCCGGTTGCTCTCTTTTAGCTGTCCATGGCCGAACAAGAGACGAGAAAGACCAGAAGAAAGTGCGGGCCAACTGGGATGCCATCAAGGCTGTGAAGAATTCTGTCAAAATACCTGTGATTGCCAATGGGAACATAAGGCACCTGGATGATGCGCACGACTGTTTGAAATACACAGGTGCTGATGGGGTACTTTCTGCTGAGTCTCTTCTTGAAAATCCAGCACTTTTTGCTGGTTTTCGAACGGCTGAATGGGTTGAGGAGGGTGAAGAATGCAATAAAGATCGGAAACTGGACCAGGCAGATCTTTTGGTGGAGTATCTGAAGCTTTGTGAACAATACCCTGTACCTTGGCGTATGATTCGTGCTCATGTGCACAAGATGCTGGGAGACTGGTTCAGAATGCATCCACATGTAAGAGAAGATTTTAATGCACAGCACATTCTCACTTTTGAGTTTCTATATAACATGGTGGATCGGCTTAGAGAGCTGGGTAAAGGAACTCCCCTTCATCTTAAGGATACTAATGCTGCAAGTATTGCAGCAAATGGGCTGGCTGTGTCAGCTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002943 GO:0003674 GO:0003824 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016491 GO:0016627 GO:0017150 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0055114 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dus

Protein Analysis

406

Amino Acids

46.14

Weight (kDa)

5.99

Isoelectric Point (pI)

32.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dus	PF01207	74 - 359	1.4e-77	Dihydrouridine synthase (Dus)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67220
fragaria_vesca	FvH4_1g16470
malus_domestica	MD02G1177400.v1.1 MD15G1287200.v1.1
prunus_persica	Prupe.6G230700_v2.0.a1
pyrus_communis	pycom15g25070
rosa_chinensis	RchiOBHm_Chr2g0106351
rosa_laevigata	RLG00000017491
rosa_multiflora	Rmu_sc0010122.1_g000004
rosa_roxburghii	Rroxscaffold_2G00137260
rosa_rugosa	Rorug02G0134900
rosa_samantha	Rh2AG186000 Rh2BG196200 Rh2CG191000 Rh2DG192100
rosa_wichuraiana	Rw2G014500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	804
AccB1I	GGYRCC	3 cut(s)	136, 278, 789
AccBSI	CCGCTC	1 cut(s)	156
AccII	CGCG	1 cut(s)	166
AciI	CCGC	7 cut(s)	18, 21, 81, 156, 268, 496, 715
AclWI	GGATC	3 cut(s)	378, 398, 1131
AcoI	YGGCCR	1 cut(s)	679
AcsI	RAATTY	3 cut(s)	39, 350, 748
AcuI	CTGAAG	1 cut(s)	992
AcyI	GRCGYC	3 cut(s)	69, 137, 279
AfaI	GTAC	3 cut(s)	275, 840, 996
AfiI	CCNNNNNNNGG	2 cut(s)	498, 613
AflII	CTTAAG	1 cut(s)	1163
AflIII	ACRYGT	1 cut(s)	1060
AgsI	TTSAA	3 cut(s)	389, 817, 863
AjnI	CCWGG	3 cut(s)	491, 792, 945
AjuI	GAANNNNNNNTTGG	2 cut(s)	24, 56
Alw21I	GWGCWC	3 cut(s)	249, 1018, 1026
Alw26I	GTCTC	4 cut(s)	320, 684, 858, 1032
Alw44I	GTGCAC	1 cut(s)	1022
AlwI	GGATC	3 cut(s)	378, 398, 1131
AlwNI	CAGNNNCTG	1 cut(s)	830
AoxI	GGCC	5 cut(s)	3, 202, 206, 679, 717
ApaLI	GTGCAC	1 cut(s)	1022
ApeKI	GCWGC	7 cut(s)	94, 109, 112, 287, 425, 1178, 1190
ApoI	RAATTY	3 cut(s)	39, 350, 748
AseI	ATTAAT	1 cut(s)	465
AspLEI	GCGC	3 cut(s)	139, 281, 805
AspS9I	GGNCC	4 cut(s)	202, 207, 717, 943
AsuHPI	GGTGA	3 cut(s)	7, 38, 926
AsuII	TTCGAA	1 cut(s)	889
AvaII	GGWCC	1 cut(s)	943
AxyI	CCTNAGG	1 cut(s)	408
BaeGI	GKGCMC	1 cut(s)	1026
BanI	GGYRCC	3 cut(s)	136, 278, 789
BanII	GRGCYC	3 cut(s)	30, 187, 249
BbsI	GAAGAC	1 cut(s)	63
Bbv12I	GWGCWC	3 cut(s)	249, 1018, 1026
BbvCI	CCTCAGC	1 cut(s)	480
BbvI	GCAGC	7 cut(s)	106, 121, 124, 274, 412, 1165, 1202
BccI	CCATC	4 cut(s)	223, 514, 740, 827
BceAI	ACGGC	4 cut(s)	124, 150, 292, 909
BciT130I	CCWGG	3 cut(s)	493, 794, 947
BciVI	GTATCC	1 cut(s)	1162
BcoDI	GTCTC	4 cut(s)	320, 684, 858, 1032
BfaI	CTAG	4 cut(s)	101, 548, 636, 644
BfoI	RGCGCY	2 cut(s)	140, 282
BfrI	CTTAAG	1 cut(s)	1163
BfuI	GTATCC	1 cut(s)	1162
BglI	GCCNNNNNGGC	1 cut(s)	737
BglII	AGATCT	1 cut(s)	952
BisI	GCNGC	9 cut(s)	21, 95, 110, 113, 268, 288, 426, 1179, 1191
BlsI	GCNGC	9 cut(s)	22, 96, 111, 114, 269, 289, 427, 1180, 1192
Bme1390I	CCNGG	3 cut(s)	493, 794, 947
Bme18I	GGWCC	1 cut(s)	943
BmgT120I	GGNCC	4 cut(s)	202, 207, 717, 943
BmiI	GGNNCC	6 cut(s)	138, 225, 280, 344, 441, 791
BmrFI	CCNGG	3 cut(s)	493, 794, 947
BmrI	ACTGGG	1 cut(s)	733
BmsI	GCATC	7 cut(s)	249, 630, 640, 718, 790, 1020, 1063
BmuI	ACTGGG	1 cut(s)	733
BpiI	GAAGAC	1 cut(s)	63
Bpu10I	CCTNAGC	1 cut(s)	480
Bpu14I	TTCGAA	1 cut(s)	889
BpuEI	CTTGAG	1 cut(s)	172
BsaHI	GRCGYC	3 cut(s)	69, 137, 279
BsaJI	CCNNGG	2 cut(s)	676, 998
Bsc4I	CCNNNNNNNGG	2 cut(s)	498, 613
Bse118I	RCCGGY	2 cut(s)	204, 653
Bse1I	ACTGG	5 cut(s)	194, 423, 728, 945, 1046
Bse21I	CCTNAGG	1 cut(s)	408
BseBI	CCWGG	3 cut(s)	493, 794, 947
BseDI	CCNNGG	2 cut(s)	676, 998
BseGI	GGATG	7 cut(s)	264, 622, 645, 655, 733, 802, 1054
BseLI	CCNNNNNNNGG	2 cut(s)	498, 613
BseMII	CTCAG	4 cut(s)	321, 399, 494, 840
BseNI	ACTGG	5 cut(s)	194, 423, 728, 945, 1046
BseRI	GAGGAG	1 cut(s)	923
BseSI	GKGCMC	1 cut(s)	1026
BseXI	GCAGC	7 cut(s)	106, 121, 124, 274, 412, 1165, 1202
BseYI	CCCAGC	4 cut(s)	84, 199, 1033, 1138
Bsh1236I	CGCG	1 cut(s)	166
BshFI	GGCC	5 cut(s)	5, 204, 208, 681, 719
BshNI	GGYRCC	3 cut(s)	136, 278, 789
BsiHKAI	GWGCWC	3 cut(s)	249, 1018, 1026
BsiSI	CCGG	2 cut(s)	205, 654
BslFI	GGGAC	1 cut(s)	563
BslI	CCNNNNNNNGG	2 cut(s)	498, 613
BsmAI	GTCTC	4 cut(s)	320, 684, 858, 1032
BsmBI	CGTCTC	1 cut(s)	684
BsmFI	GGGAC	1 cut(s)	563
BsmI	GAATGC	2 cut(s)	926, 1056
BsnI	GGCC	5 cut(s)	5, 204, 208, 681, 719
Bsp119I	TTCGAA	1 cut(s)	889
Bsp1286I	GDGCHC	5 cut(s)	30, 187, 249, 1018, 1026
Bsp143I	GATC	6 cut(s)	216, 370, 403, 931, 952, 1123
Bsp19I	CCATGG	1 cut(s)	676
Bsp68I	TCGCGA	1 cut(s)	166
BspACI	CCGC	7 cut(s)	18, 21, 81, 156, 268, 496, 715
BspANI	GGCC	5 cut(s)	5, 204, 208, 681, 719
BspCNI	CTCAG	4 cut(s)	322, 400, 493, 841
BspFNI	CGCG	1 cut(s)	166
BspLI	GGNNCC	6 cut(s)	138, 225, 280, 344, 441, 791
BspPI	GGATC	3 cut(s)	378, 398, 1131
BspT104I	TTCGAA	1 cut(s)	889
BspT107I	GGYRCC	3 cut(s)	136, 278, 789
BspTI	CTTAAG	1 cut(s)	1163
BsrBI	CCGCTC	1 cut(s)	156
BsrFI	RCCGGY	2 cut(s)	204, 653
BsrI	ACTGG	5 cut(s)	194, 423, 728, 945, 1046
BssAI	RCCGGY	2 cut(s)	204, 653
BssECI	CCNNGG	2 cut(s)	676, 998
BssMI	GATC	6 cut(s)	216, 370, 403, 931, 952, 1123
BssNI	GRCGYC	3 cut(s)	69, 137, 279
BssT1I	CCWWGG	2 cut(s)	676, 998
Bst2UI	CCWGG	3 cut(s)	493, 794, 947
Bst4CI	ACNGT	2 cut(s)	449, 812
Bst6I	CTCTTC	1 cut(s)	861
BstACI	GRCGYC	3 cut(s)	69, 137, 279
BstAFI	CTTAAG	1 cut(s)	1163
BstAPI	GCANNNNNTGC	3 cut(s)	878, 1030, 1187
BstBI	TTCGAA	1 cut(s)	889
BstC8I	GCNNGC	4 cut(s)	177, 206, 717, 1203
BstDEI	CTNAG	5 cut(s)	330, 408, 480, 849, 1130
BstDSI	CCRYGG	1 cut(s)	676
BstF5I	GGATG	7 cut(s)	264, 622, 645, 655, 733, 802, 1054
BstFNI	CGCG	1 cut(s)	166
BstH2I	RGCGCY	2 cut(s)	140, 282
BstHHI	GCGC	3 cut(s)	139, 281, 805
BstKTI	GATC	6 cut(s)	219, 373, 406, 934, 955, 1126
BstMAI	GTCTC	4 cut(s)	320, 684, 858, 1032
BstMBI	GATC	6 cut(s)	216, 370, 403, 931, 952, 1123
BstNI	CCWGG	3 cut(s)	493, 794, 947
BstNSI	RCATGY	1 cut(s)	1064
BstSCI	CCNGG	3 cut(s)	491, 792, 945
BstSLI	GKGCMC	1 cut(s)	1026
BstUI	CGCG	1 cut(s)	166
BstV1I	GCAGC	7 cut(s)	106, 121, 124, 274, 412, 1165, 1202
BstV2I	GAAGAC	1 cut(s)	63
BstX2I	RGATCY	1 cut(s)	952
BstYI	RGATCY	1 cut(s)	952
Bsu36I	CCTNAGG	1 cut(s)	408
BsuI	GTATCC	1 cut(s)	1162
BsuRI	GGCC	5 cut(s)	5, 204, 208, 681, 719
BtgI	CCRYGG	1 cut(s)	676
BtsCI	GGATG	7 cut(s)	264, 622, 645, 655, 733, 802, 1054
BtsIMutI	CAGTG	1 cut(s)	187
BtuMI	TCGCGA	1 cut(s)	166
Cac8I	GCNNGC	4 cut(s)	177, 206, 717, 1203
CaiI	CAGNNNCTG	1 cut(s)	830
CfoI	GCGC	3 cut(s)	139, 281, 805
Cfr10I	RCCGGY	2 cut(s)	204, 653
Cfr13I	GGNCC	4 cut(s)	202, 207, 717, 943
CseI	GACGC	2 cut(s)	77, 293
Csp6I	GTAC	3 cut(s)	274, 839, 995
CspCI	CAANNNNNGTGG	2 cut(s)	417, 452
CviAII	CATG	7 cut(s)	180, 301, 588, 677, 1019, 1061, 1117
CviQI	GTAC	3 cut(s)	274, 839, 995
DdeI	CTNAG	5 cut(s)	330, 408, 480, 849, 1130
DinI	GGCGCC	2 cut(s)	138, 280
DpnI	GATC	6 cut(s)	218, 372, 405, 933, 954, 1125
DpnII	GATC	6 cut(s)	216, 370, 403, 931, 952, 1123
EaeI	YGGCCR	1 cut(s)	679
Eam1104I	CTCTTC	1 cut(s)	861
EarI	CTCTTC	1 cut(s)	861
EciI	GGCGGA	1 cut(s)	70
Ecl136II	GAGCTC	1 cut(s)	247
Eco130I	CCWWGG	2 cut(s)	676, 998
Eco24I	GRGCYC	3 cut(s)	30, 187, 249
Eco47I	GGWCC	1 cut(s)	943
Eco53kI	GAGCTC	1 cut(s)	247
Eco57I	CTGAAG	1 cut(s)	992
Eco81I	CCTNAGG	1 cut(s)	408
EcoICRI	GAGCTC	1 cut(s)	247
EcoRI	GAATTC	2 cut(s)	39, 748
EcoRII	CCWGG	3 cut(s)	491, 792, 945
EcoT14I	CCWWGG	2 cut(s)	676, 998
EcoT22I	ATGCAT	1 cut(s)	1056
EcoT38I	GRGCYC	3 cut(s)	30, 187, 249
EgeI	GGCGCC	2 cut(s)	138, 280
EheI	GGCGCC	2 cut(s)	138, 280
ErhI	CCWWGG	2 cut(s)	676, 998
Esp3I	CGTCTC	1 cut(s)	684
FaeI	CATG	7 cut(s)	183, 304, 591, 680, 1022, 1064, 1120
FaqI	GGGAC	1 cut(s)	563
FatI	CATG	7 cut(s)	179, 300, 587, 676, 1018, 1060, 1116
FauI	CCCGC	3 cut(s)	149, 489, 708
Fnu4HI	GCNGC	9 cut(s)	21, 95, 110, 113, 268, 288, 426, 1179, 1191
FokI	GGATG	7 cut(s)	271, 629, 652, 662, 740, 809, 1041
FriOI	GRGCYC	3 cut(s)	30, 187, 249
FseI	GGCCGGCC	1 cut(s)	208
Fsp4HI	GCNGC	9 cut(s)	21, 95, 110, 113, 268, 288, 426, 1179, 1191
FspAI	RTGCGCAY	1 cut(s)	804
FspBI	CTAG	4 cut(s)	101, 548, 636, 644
FspI	TGCGCA	1 cut(s)	804
GlaI	GCGC	3 cut(s)	138, 280, 804
GluI	GCNGC	9 cut(s)	21, 95, 110, 113, 268, 288, 426, 1179, 1191
GsaI	CCCAGC	4 cut(s)	88, 203, 1037, 1142
HaeII	RGCGCY	2 cut(s)	140, 282
HaeIII	GGCC	5 cut(s)	5, 204, 208, 681, 719
HapII	CCGG	2 cut(s)	205, 654
HgaI	GACGC	2 cut(s)	77, 293
HhaI	GCGC	3 cut(s)	139, 281, 805
Hin1I	GRCGYC	3 cut(s)	69, 137, 279
Hin1II	CATG	7 cut(s)	183, 304, 591, 680, 1022, 1064, 1120
Hin6I	GCGC	3 cut(s)	137, 279, 803
HinP1I	GCGC	3 cut(s)	137, 279, 803
HincII	GTYRAC	1 cut(s)	460
HindII	GTYRAC	1 cut(s)	460
HindIII	AAGCTT	2 cut(s)	527, 974
HinfI	GANTC	3 cut(s)	161, 851, 1009
HpaII	CCGG	2 cut(s)	205, 654
HphI	GGTGA	3 cut(s)	7, 38, 926
Hpy166II	GTNNAC	4 cut(s)	235, 460, 983, 1024
Hpy188III	TCNNGA	4 cut(s)	165, 407, 607, 860
Hpy8I	GTNNAC	4 cut(s)	235, 460, 983, 1024
Hpy99I	CGWCG	2 cut(s)	55, 287
HpyAV	CCTTC	1 cut(s)	1166
HpyCH4III	ACNGT	2 cut(s)	449, 812
HpyF3I	CTNAG	5 cut(s)	330, 408, 480, 849, 1130
Hsp92I	GRCGYC	3 cut(s)	69, 137, 279
Hsp92II	CATG	7 cut(s)	183, 304, 591, 680, 1022, 1064, 1120
HspAI	GCGC	3 cut(s)	137, 279, 803
KasI	GGCGCC	2 cut(s)	136, 278
KroI	GCCGGC	1 cut(s)	204
KroNI	GCCGGC	1 cut(s)	206
Kzo9I	GATC	6 cut(s)	216, 370, 403, 931, 952, 1123
LmnI	GCTCC	6 cut(s)	83, 147, 229, 252, 439, 509
Lsp1109I	GCAGC	7 cut(s)	106, 121, 124, 274, 412, 1165, 1202
LweI	GCATC	7 cut(s)	249, 630, 640, 718, 790, 1020, 1063
MaeI	CTAG	4 cut(s)	101, 548, 636, 644
MalI	GATC	6 cut(s)	218, 372, 405, 933, 954, 1125
MbiI	CCGCTC	1 cut(s)	156
MboI	GATC	6 cut(s)	216, 370, 403, 931, 952, 1123
MboII	GAAGA	7 cut(s)	68, 595, 718, 757, 848, 929, 1082
MflI	RGATCY	1 cut(s)	952
MhlI	GDGCHC	5 cut(s)	30, 187, 249, 1018, 1026
MluCI	AATT	8 cut(s)	39, 168, 350, 389, 466, 486, 624, 748
Mly113I	GGCGCC	2 cut(s)	137, 279
MlyI	GAGTC	2 cut(s)	170, 860
MmeI	TCCRAC	2 cut(s)	33, 99
Mph1103I	ATGCAT	1 cut(s)	1056
MroNI	GCCGGC	1 cut(s)	204
MseI	TTAA	3 cut(s)	465, 1077, 1164
MslI	CAYNNNNRTG	3 cut(s)	299, 795, 1059
MspA1I	CMGCKG	1 cut(s)	1214
MspCI	CTTAAG	1 cut(s)	1163
MspI	CCGG	2 cut(s)	205, 654
MspR9I	CCNGG	3 cut(s)	493, 794, 947
Mva1269I	GAATGC	2 cut(s)	926, 1056
MvaI	CCWGG	3 cut(s)	493, 794, 947
MvnI	CGCG	1 cut(s)	166
NaeI	GCCGGC	1 cut(s)	206
NarI	GGCGCC	2 cut(s)	137, 279
NcoI	CCATGG	1 cut(s)	676
NdeII	GATC	6 cut(s)	216, 370, 403, 931, 952, 1123
NgoMIV	GCCGGC	1 cut(s)	204
NlaIII	CATG	7 cut(s)	183, 304, 591, 680, 1022, 1064, 1120
NlaIV	GGNNCC	6 cut(s)	138, 225, 280, 344, 441, 791
NmeAIII	GCCGAG	1 cut(s)	49
NruI	TCGCGA	1 cut(s)	166
NsbI	TGCGCA	1 cut(s)	804
NsiI	ATGCAT	1 cut(s)	1056
NspI	RCATGY	1 cut(s)	1064
NspV	TTCGAA	1 cut(s)	889
PciI	ACATGT	1 cut(s)	1060
PctI	GAATGC	2 cut(s)	926, 1056
PdiI	GCCGGC	1 cut(s)	206
PfeI	GAWTC	1 cut(s)	1009
PkrI	GCNGC	9 cut(s)	22, 96, 111, 114, 269, 289, 427, 1180, 1192
PleI	GAGTC	2 cut(s)	169, 859
PluTI	GGCGCC	2 cut(s)	140, 282
PpsI	GAGTC	2 cut(s)	169, 859
PscI	ACATGT	1 cut(s)	1060
PshBI	ATTAAT	1 cut(s)	465
Psp124BI	GAGCTC	1 cut(s)	249
Psp6I	CCWGG	3 cut(s)	491, 792, 945
PspFI	CCCAGC	4 cut(s)	84, 199, 1033, 1138
PspGI	CCWGG	3 cut(s)	491, 792, 945
PspN4I	GGNNCC	6 cut(s)	138, 225, 280, 344, 441, 791
PspPI	GGNCC	4 cut(s)	202, 207, 717, 943
PstNI	CAGNNNCTG	1 cut(s)	830
PsuI	RGATCY	1 cut(s)	952
PvuII	CAGCTG	1 cut(s)	1214
RigI	GGCCGGCC	1 cut(s)	208
RruI	TCGCGA	1 cut(s)	166
RsaI	GTAC	3 cut(s)	275, 840, 996
RsaNI	GTAC	3 cut(s)	274, 839, 995
RseI	CAYNNNNRTG	3 cut(s)	299, 795, 1059
SacI	GAGCTC	1 cut(s)	249
SaqAI	TTAA	3 cut(s)	465, 1077, 1164
SatI	GCNGC	9 cut(s)	21, 95, 110, 113, 268, 288, 426, 1179, 1191
Sau3AI	GATC	6 cut(s)	216, 370, 403, 931, 952, 1123
Sau96I	GGNCC	4 cut(s)	202, 207, 717, 943
SchI	GAGTC	2 cut(s)	170, 860
ScrFI	CCNGG	3 cut(s)	493, 794, 947
SduI	GDGCHC	5 cut(s)	30, 187, 249, 1018, 1026
SfaNI	GCATC	7 cut(s)	249, 630, 640, 718, 790, 1020, 1063
SfoI	GGCGCC	2 cut(s)	138, 280
SfuI	TTCGAA	1 cut(s)	889
SinI	GGWCC	1 cut(s)	943
SmiMI	CAYNNNNRTG	3 cut(s)	299, 795, 1059
SmlI	CTYRAG	2 cut(s)	151, 1163
SmoI	CTYRAG	2 cut(s)	151, 1163
Sse9I	AATT	8 cut(s)	39, 168, 350, 389, 466, 486, 624, 748
SsiI	CCGC	7 cut(s)	18, 21, 81, 156, 268, 496, 715
SspDI	GGCGCC	2 cut(s)	136, 278
SspMI	CTAG	4 cut(s)	101, 548, 636, 644
SstI	GAGCTC	1 cut(s)	249
StyD4I	CCNGG	3 cut(s)	491, 792, 945
StyI	CCWWGG	2 cut(s)	676, 998
TaaI	ACNGT	2 cut(s)	449, 812
TaqI	TCGA	2 cut(s)	63, 889
TasI	AATT	8 cut(s)	39, 168, 350, 389, 466, 486, 624, 748
TauI	GCSGC	2 cut(s)	23, 270
TfiI	GAWTC	1 cut(s)	1009
Tru1I	TTAA	3 cut(s)	465, 1077, 1164
Tru9I	TTAA	3 cut(s)	465, 1077, 1164
TscAI	CASTG	1 cut(s)	194
TseI	GCWGC	7 cut(s)	94, 109, 112, 287, 425, 1178, 1190
TspDTI	ATGAA	2 cut(s)	576, 1148
TspGWI	ACGGA	2 cut(s)	366, 587
TspRI	CASTG	1 cut(s)	194
Vha464I	CTTAAG	1 cut(s)	1163
VneI	GTGCAC	1 cut(s)	1022
VpaK11BI	GGWCC	1 cut(s)	943
VspI	ATTAAT	1 cut(s)	465
XapI	RAATTY	3 cut(s)	39, 350, 748
XceI	RCATGY	1 cut(s)	1064
XcmI	CCANNNNNNNNNTGG	1 cut(s)	217
XspI	CTAG	4 cut(s)	101, 548, 636, 644
Zsp2I	ATGCAT	1 cut(s)	1056

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.