Crossover junction endonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0114761 RchiOBHm_Chr6g0277201 |
| rosa_multiflora | Rmu_sc0001218.1_g000043 Rmu_sc0001408.1_g000023 |
| rosa_roxburghii | Rroxscaffold_6G00399270 |
| rosa_samantha | Rh2CG253800 Rh3AG316700 Rh5BG392000 Rh5CG262300 Rh6AG315600 |
| rosa_wichuraiana | Rw1G004620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 402 |
| AccI | GTMKAC | 1 cut(s) | 226 |
| AcoI | YGGCCR | 1 cut(s) | 83 |
| AcsI | RAATTY | 1 cut(s) | 156 |
| AcuI | CTGAAG | 1 cut(s) | 33 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 64 |
| AgsI | TTSAA | 1 cut(s) | 430 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 256, 288 |
| AluBI | AGCT | 4 cut(s) | 32, 311, 340, 425 |
| AluI | AGCT | 4 cut(s) | 32, 311, 340, 425 |
| Alw21I | GWGCWC | 1 cut(s) | 313 |
| Alw26I | GTCTC | 2 cut(s) | 44, 144 |
| AoxI | GGCC | 1 cut(s) | 83 |
| ApeKI | GCWGC | 2 cut(s) | 337, 402 |
| ApoI | RAATTY | 1 cut(s) | 156 |
| AseI | ATTAAT | 1 cut(s) | 270 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 271 |
| AspS9I | GGNCC | 2 cut(s) | 254, 355 |
| AsuHPI | GGTGA | 1 cut(s) | 209 |
| AvaII | GGWCC | 2 cut(s) | 254, 355 |
| BalI | TGGCCA | 1 cut(s) | 85 |
| BanII | GRGCYC | 2 cut(s) | 313, 388 |
| BbsI | GAAGAC | 1 cut(s) | 92 |
| Bbv12I | GWGCWC | 1 cut(s) | 313 |
| BbvI | GCAGC | 2 cut(s) | 349, 389 |
| BccI | CCATC | 4 cut(s) | 94, 181, 242, 298 |
| BcoDI | GTCTC | 2 cut(s) | 44, 144 |
| BfaI | CTAG | 1 cut(s) | 243 |
| BfuAI | ACCTGC | 1 cut(s) | 402 |
| BisI | GCNGC | 2 cut(s) | 338, 403 |
| BlsI | GCNGC | 2 cut(s) | 339, 404 |
| Bme18I | GGWCC | 2 cut(s) | 254, 355 |
| BmgT120I | GGNCC | 2 cut(s) | 254, 355 |
| BmsI | GCATC | 1 cut(s) | 296 |
| BpiI | GAAGAC | 1 cut(s) | 92 |
| BsaJI | CCNNGG | 1 cut(s) | 367 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 64 |
| BseDI | CCNNGG | 1 cut(s) | 367 |
| BseGI | GGATG | 2 cut(s) | 173, 253 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BseRI | GAGGAG | 1 cut(s) | 314 |
| BseXI | GCAGC | 2 cut(s) | 349, 389 |
| BsgI | GTGCAG | 1 cut(s) | 400 |
| BshFI | GGCC | 1 cut(s) | 85 |
| BsiHKAI | GWGCWC | 1 cut(s) | 313 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BsmAI | GTCTC | 2 cut(s) | 44, 144 |
| BsnI | GGCC | 1 cut(s) | 85 |
| Bsp1286I | GDGCHC | 2 cut(s) | 313, 388 |
| BspANI | GGCC | 1 cut(s) | 85 |
| BspMI | ACCTGC | 1 cut(s) | 402 |
| BssECI | CCNNGG | 1 cut(s) | 367 |
| BssT1I | CCWWGG | 1 cut(s) | 367 |
| Bst6I | CTCTTC | 1 cut(s) | 79 |
| BstC8I | GCNNGC | 2 cut(s) | 388, 392 |
| BstF5I | GGATG | 2 cut(s) | 173, 253 |
| BstMAI | GTCTC | 2 cut(s) | 44, 144 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 387, 408 |
| BstV1I | GCAGC | 2 cut(s) | 349, 389 |
| BstV2I | GAAGAC | 1 cut(s) | 92 |
| BsuRI | GGCC | 1 cut(s) | 85 |
| BtsCI | GGATG | 2 cut(s) | 173, 253 |
| BtsIMutI | CAGTG | 1 cut(s) | 43 |
| BveI | ACCTGC | 1 cut(s) | 402 |
| Cac8I | GCNNGC | 2 cut(s) | 388, 392 |
| Cfr13I | GGNCC | 2 cut(s) | 254, 355 |
| CviAII | CATG | 1 cut(s) | 334 |
| CviJI | RGCY | 8 cut(s) | 32, 85, 311, 340, 386, 394, 402, 425 |
| CviKI_1 | RGCY | 8 cut(s) | 32, 85, 311, 340, 386, 394, 402, 425 |
| EaeI | YGGCCR | 1 cut(s) | 83 |
| Eam1104I | CTCTTC | 1 cut(s) | 79 |
| EarI | CTCTTC | 1 cut(s) | 79 |
| Ecl136II | GAGCTC | 1 cut(s) | 311 |
| Eco130I | CCWWGG | 1 cut(s) | 367 |
| Eco24I | GRGCYC | 2 cut(s) | 313, 388 |
| Eco47I | GGWCC | 2 cut(s) | 254, 355 |
| Eco53kI | GAGCTC | 1 cut(s) | 311 |
| Eco57I | CTGAAG | 1 cut(s) | 33 |
| EcoICRI | GAGCTC | 1 cut(s) | 311 |
| EcoO109I | RGGNCCY | 1 cut(s) | 254 |
| EcoRI | GAATTC | 1 cut(s) | 156 |
| EcoT14I | CCWWGG | 1 cut(s) | 367 |
| EcoT38I | GRGCYC | 2 cut(s) | 313, 388 |
| ErhI | CCWWGG | 1 cut(s) | 367 |
| FaeI | CATG | 1 cut(s) | 337 |
| FatI | CATG | 1 cut(s) | 333 |
| FauNDI | CATATG | 2 cut(s) | 132, 407 |
| FblI | GTMKAC | 1 cut(s) | 226 |
| Fnu4HI | GCNGC | 2 cut(s) | 338, 403 |
| FokI | GGATG | 2 cut(s) | 160, 260 |
| FriOI | GRGCYC | 2 cut(s) | 313, 388 |
| Fsp4HI | GCNGC | 2 cut(s) | 338, 403 |
| FspBI | CTAG | 1 cut(s) | 243 |
| GluI | GCNGC | 2 cut(s) | 338, 403 |
| HaeIII | GGCC | 1 cut(s) | 85 |
| Hin1II | CATG | 1 cut(s) | 337 |
| HphI | GGTGA | 1 cut(s) | 209 |
| Hpy166II | GTNNAC | 1 cut(s) | 227 |
| Hpy188I | TCNGA | 3 cut(s) | 13, 277, 449 |
| Hpy188III | TCNNGA | 1 cut(s) | 107 |
| Hpy8I | GTNNAC | 1 cut(s) | 227 |
| HpyAV | CCTTC | 1 cut(s) | 324 |
| HpyCH4IV | ACGT | 1 cut(s) | 343 |
| HpyCH4V | TGCA | 5 cut(s) | 287, 337, 381, 405, 411 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 387, 408 |
| HpySE526I | ACGT | 1 cut(s) | 343 |
| Hsp92II | CATG | 1 cut(s) | 337 |
| LmnI | GCTCC | 2 cut(s) | 308, 316 |
| LpnPI | CCDG | 2 cut(s) | 367, 397 |
| Lsp1109I | GCAGC | 2 cut(s) | 349, 389 |
| LweI | GCATC | 1 cut(s) | 296 |
| MaeI | CTAG | 1 cut(s) | 243 |
| MaeII | ACGT | 1 cut(s) | 343 |
| MboII | GAAGA | 6 cut(s) | 26, 66, 92, 95, 122, 152 |
| MhlI | GDGCHC | 2 cut(s) | 313, 388 |
| MlsI | TGGCCA | 1 cut(s) | 85 |
| MluCI | AATT | 4 cut(s) | 156, 267, 271, 328 |
| MluNI | TGGCCA | 1 cut(s) | 85 |
| MnlI | CCTC | 3 cut(s) | 109, 245, 335 |
| Mox20I | TGGCCA | 1 cut(s) | 85 |
| MroXI | GAANNNNTTC | 1 cut(s) | 271 |
| MscI | TGGCCA | 1 cut(s) | 85 |
| MseI | TTAA | 1 cut(s) | 270 |
| Msp20I | TGGCCA | 1 cut(s) | 85 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 387, 408 |
| NdeI | CATATG | 2 cut(s) | 132, 407 |
| NlaIII | CATG | 1 cut(s) | 337 |
| PdmI | GAANNNNTTC | 1 cut(s) | 271 |
| PkrI | GCNGC | 2 cut(s) | 339, 404 |
| PpuMI | RGGWCCY | 1 cut(s) | 254 |
| PshBI | ATTAAT | 1 cut(s) | 270 |
| Psp124BI | GAGCTC | 1 cut(s) | 313 |
| Psp5II | RGGWCCY | 1 cut(s) | 254 |
| PspPI | GGNCC | 2 cut(s) | 254, 355 |
| PspPPI | RGGWCCY | 1 cut(s) | 254 |
| SacI | GAGCTC | 1 cut(s) | 313 |
| SaqAI | TTAA | 1 cut(s) | 270 |
| SatI | GCNGC | 2 cut(s) | 338, 403 |
| Sau96I | GGNCC | 2 cut(s) | 254, 355 |
| SduI | GDGCHC | 2 cut(s) | 313, 388 |
| SetI | ASST | 9 cut(s) | 34, 120, 256, 285, 313, 342, 346, 416, 427 |
| SfaNI | GCATC | 1 cut(s) | 296 |
| SinI | GGWCC | 2 cut(s) | 254, 355 |
| Sse9I | AATT | 4 cut(s) | 156, 267, 271, 328 |
| SspMI | CTAG | 1 cut(s) | 243 |
| SstI | GAGCTC | 1 cut(s) | 313 |
| StyI | CCWWGG | 1 cut(s) | 367 |
| TaiI | ACGT | 1 cut(s) | 346 |
| TaqI | TCGA | 1 cut(s) | 106 |
| TasI | AATT | 4 cut(s) | 156, 267, 271, 328 |
| Tru1I | TTAA | 1 cut(s) | 270 |
| Tru9I | TTAA | 1 cut(s) | 270 |
| TscAI | CASTG | 1 cut(s) | 43 |
| TseI | GCWGC | 2 cut(s) | 337, 402 |
| TspDTI | ATGAA | 5 cut(s) | 38, 119, 149, 306, 322 |
| TspRI | CASTG | 1 cut(s) | 43 |
| VpaK11BI | GGWCC | 2 cut(s) | 254, 355 |
| VspI | ATTAAT | 1 cut(s) | 270 |
| XapI | RAATTY | 1 cut(s) | 156 |
| XmiI | GTMKAC | 1 cut(s) | 226 |
| XmnI | GAANNNNTTC | 1 cut(s) | 271 |
| XspI | CTAG | 1 cut(s) | 243 |