aspartic-type endopeptidase activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0361991 RchiOBHm_Chr2g0131301 |
| rosa_multiflora | Rmu_sc0001198.1_g000002 Rmu_sc0002205.1_g000044 Rmu_sc0003600.1_g000024 Rmu_sc0005564.1_g000004 Rmu_sc0011921.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00415760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 26 |
| AccI | GTMKAC | 1 cut(s) | 82 |
| AciI | CCGC | 1 cut(s) | 39 |
| AjnI | CCWGG | 1 cut(s) | 8 |
| AluBI | AGCT | 1 cut(s) | 121 |
| AluI | AGCT | 1 cut(s) | 121 |
| AspLEI | GCGC | 1 cut(s) | 27 |
| BciT130I | CCWGG | 1 cut(s) | 10 |
| BfaI | CTAG | 1 cut(s) | 122 |
| Bme1390I | CCNGG | 1 cut(s) | 10 |
| BmrFI | CCNGG | 1 cut(s) | 10 |
| BseBI | CCWGG | 1 cut(s) | 10 |
| BsgI | GTGCAG | 1 cut(s) | 78 |
| BspACI | CCGC | 1 cut(s) | 39 |
| Bst2UI | CCWGG | 1 cut(s) | 10 |
| BstHHI | GCGC | 1 cut(s) | 27 |
| BstNI | CCWGG | 1 cut(s) | 10 |
| BstNSI | RCATGY | 1 cut(s) | 65 |
| BstSCI | CCNGG | 1 cut(s) | 8 |
| BtsI | GCAGTG | 1 cut(s) | 90 |
| BtsIMutI | CAGTG | 1 cut(s) | 90 |
| CfoI | GCGC | 1 cut(s) | 27 |
| CviAII | CATG | 1 cut(s) | 62 |
| CviJI | RGCY | 2 cut(s) | 8, 121 |
| CviKI_1 | RGCY | 2 cut(s) | 8, 121 |
| Eco32I | GATATC | 1 cut(s) | 145 |
| EcoRII | CCWGG | 1 cut(s) | 8 |
| EcoRV | GATATC | 1 cut(s) | 145 |
| FaeI | CATG | 1 cut(s) | 65 |
| FaiI | YATR | 5 cut(s) | 51, 63, 71, 151, 161 |
| FatI | CATG | 1 cut(s) | 61 |
| FblI | GTMKAC | 1 cut(s) | 82 |
| FspAI | RTGCGCAY | 1 cut(s) | 26 |
| FspBI | CTAG | 1 cut(s) | 122 |
| FspI | TGCGCA | 1 cut(s) | 26 |
| GlaI | GCGC | 1 cut(s) | 26 |
| HhaI | GCGC | 1 cut(s) | 27 |
| Hin1II | CATG | 1 cut(s) | 65 |
| Hin6I | GCGC | 1 cut(s) | 25 |
| HinP1I | GCGC | 1 cut(s) | 25 |
| HinfI | GANTC | 1 cut(s) | 137 |
| Hpy166II | GTNNAC | 1 cut(s) | 83 |
| Hpy188I | TCNGA | 1 cut(s) | 142 |
| Hpy8I | GTNNAC | 1 cut(s) | 83 |
| HpyCH4V | TGCA | 3 cut(s) | 53, 61, 95 |
| Hsp92II | CATG | 1 cut(s) | 65 |
| HspAI | GCGC | 1 cut(s) | 25 |
| LpnPI | CCDG | 1 cut(s) | 22 |
| MaeI | CTAG | 1 cut(s) | 122 |
| MaeIII | GTNAC | 1 cut(s) | 114 |
| MluCI | AATT | 1 cut(s) | 75 |
| MlyI | GAGTC | 1 cut(s) | 146 |
| MmeI | TCCRAC | 1 cut(s) | 124 |
| MspR9I | CCNGG | 1 cut(s) | 10 |
| MvaI | CCWGG | 1 cut(s) | 10 |
| NlaIII | CATG | 1 cut(s) | 65 |
| NsbI | TGCGCA | 1 cut(s) | 26 |
| NspI | RCATGY | 1 cut(s) | 65 |
| PleI | GAGTC | 1 cut(s) | 145 |
| PpsI | GAGTC | 1 cut(s) | 145 |
| Psp6I | CCWGG | 1 cut(s) | 8 |
| PspGI | CCWGG | 1 cut(s) | 8 |
| SchI | GAGTC | 1 cut(s) | 146 |
| ScrFI | CCNGG | 1 cut(s) | 10 |
| SetI | ASST | 2 cut(s) | 106, 123 |
| SgeI | CNNG | 6 cut(s) | 21, 22, 54, 74, 134, 148 |
| Sse9I | AATT | 1 cut(s) | 75 |
| SsiI | CCGC | 1 cut(s) | 39 |
| SspI | AATATT | 2 cut(s) | 34, 57 |
| SspMI | CTAG | 1 cut(s) | 122 |
| StyD4I | CCNGG | 1 cut(s) | 8 |
| TasI | AATT | 1 cut(s) | 75 |
| TscAI | CASTG | 1 cut(s) | 97 |
| TspRI | CASTG | 1 cut(s) | 97 |
| XceI | RCATGY | 1 cut(s) | 65 |
| XmiI | GTMKAC | 1 cut(s) | 82 |
| XspI | CTAG | 1 cut(s) | 122 |