Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013037

Physical Location & Seq

Genomic Coordinates Reverse (-)

63797276 .. 63799875

Gene Structure 2600 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ51585

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGGCTGTTTCATCTTCATCTTCATCTTCCTTCATCTTCTTCTTCCTTGTCCTCTGTCTCCTTCATCTAACTTCATCTTTCTCAACTGACCAATCCGACGCTCACCGGACGTTCATCGTCCACGTGTCGAAATATTCCAAGCCTTCTCTGTTCTCCTCCCACCGCCGCTGGTACACCTCCCTCCTCCGCTCCCTCCCTCCTTCCCCTCACCCCACCAAGCTCCTCTACACCTACTCACGCGCCGTCCATGGCTTCTCCGCCACGCTCTCCCCCTCCCAGGCCCACGCGCTCCAGTCCCACCCCGCCGTCCTCTCCGTCGTCCCCGACATGCCGCGCCAGCTCCACACCACCCGCACCTACAACTTCCTCGGCCTCGCCGACAACTTCGGCCTCTGGCCCAACTCCGACTACGCGGACGACGTCATCATCGGAGTTCTCGACACCGGGATTTGGCCCGAGCGCCCGAGCTTCTCTGACTCGGGTCTGGGTCCCGTCCCGGAGACGTGGAAAGGCAAATGCGTGACCGCCGGCGACTTTCCGGCCTCCGCTTGTAACCGGAAGATCATCGGCGCCAGAGCTTATTTCAACGGCTACGAATCCCACCTCGGAAAACCCATGGACGAGTCCAACGAATCCACATCCCCACGCGACACAGAAGGCCACGGCACCCACACAGCCTCCACCGCCGGCGGGTCTAGGGTTTCTAACGCCAGCTTCTACGAATACGCCTACGGCGAAGCCAGAGGCATGGCCAGCAAAGCCAGAATCGCAGCCTATAAAATCTGCTGGACTTTTGGTTGTTTCGATTCGGATATTCTTGCCGCCATGGACCAAGCAATCGCCGACGGAGTCCACATCATCTCGCTCTCGGTCGGAGCCAGCGGCGGAGCTCCGCCTTACGACCGCGACTCCATCGCAATCGGAGCTTTCGGCGCAGCCCAGCACGGCGTTCTGGTCTCGGCCTCTGCAGGAAACTCCGGGCCCGGCGCGTTTACCGCCACCAACATCGCTCCTTGGATCCTTACAGTCGGAGCTTCCACTCTTGACAGAGAGTTCCCAGCCGATGTCGTTTTGGGCGACGGCAGAGTCTTCAACGGCGTGTCGTTGTACTCCGGCGAGGGGCTAGTGGACTTCAAGCTCCCGCTAGTCTACGGCGGAGACTGCGGCAGTAGGTACTGCTATTCAGGGTCTCTGCAACCGTCAAAAGTACAAGGCAAGATCGTTGTTTGTGATCGTGGAGGTAACGCCAGAGTCGCCAAAGGCGGCGCCGTTAAGCTTGCAGGTGGGCTCGGAATGATAATGGCAAATACAGAAGAGAGCGGTGAAGAGCTTCTTGCTGATTCTCACCTCGTCCCAGCAGCAATGGTGGGTCAAATCGCTGCCGATCAGATAAGGAGCTACATCAGATTGGGGAACTATCCGACTGCAACGATCAAATTCCGAGGAACTGTAATTGGGCCTTCTCCACCATCGCCAAAGGTAGCTTCGTTTTCGAGCAGGGGTCCGAATTCTCTGACTCCGGAGATATTGAAACCCGATGTGATTGCTCCTGGAGTGAACATTCTAGCTGGGTGGACTGGTGCTTCTTCCCCTACTGATTTGGACATTGATTCGAGACGAGTTGAGTTCAATATAATTTCTGGCACATCCATGTCCTGCCCGCATGTTAGTGGCATTGCAGCTCTGCTTCGTAAGGCCTATCCGGAATGGTCTCCTGCTGCTATTAAATCCGCGTTGGTGACAACAGCTTATACTTTGGACAATTCCGGGAAGAAGATTGAGGATCTTGCAAATGGGAGAGAATCGACGCCTTTTGTTCATGGAGCCGGGCATGTTGATCCCAATAGGGCACTTAATCCGGGGTTGGTGTATGATATCAATGTGAATGACTATGTTGCATTCATGTGCTCGATTGGTTATGGTCCTAGGCAGATAGCTGTTTTCGTGAGAGAGTTTGCTGGGGATGATATATGTGCCAGACACAGTTTAGCTAGTCCTGGTGATTTGAATTATCCGTCATTTGCAGTGGTGTTTAAGCCTGGCCAGGAGTTGGTGAAGTACAAGAGAGTTGTGACGAATGTTGGGAGTGTTGCTGATGCAGTTTATGAGGTAAATGTGGATGCTCCGGCTGGTGTTGAAATCAGTGTTGAGCCGAGTAAGCTGGTTTTCAGTGAAGAAAATCAGACTCAGAGTTATGAGGTTAGATTTGCGAAAGGTGTTGGGTATGGAAATGGGGAGAGATATGGGTCGATTGAGTGGAGCAATGGGCATCACCATGTGAGGAGTCCAGTTGCTGTTAGGTGGAGCAATACTGGGTATTCAGCCTCCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006508 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009653 GO:0010016 GO:0010150 GO:0010223 GO:0010346 GO:0016020 GO:0016787 GO:0017171 GO:0019538 GO:0030312 GO:0031090 GO:0032501 GO:0032502 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0070011 GO:0071704 GO:0071944 GO:0090693 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

777

Amino Acids

82.63

Weight (kDa)

6.43

Isoelectric Point (pI)

38.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	37 - 115	9.6e-18	Peptidase inhibitor I9
Peptidase_S8	PF00082	139 - 594	9.2e-50	Subtilase family
PA	PF02225	380 - 464	5.2e-12	PA domain
fn3_6	PF17766	668 - 766	8.7e-28	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14067
fragaria_vesca	FvH4_6g35010
malus_domestica	MD09G1180500.v1.1 MD17G1166500.v1.1
prunus_persica	Prupe.3G039000_v2.0.a1
pyrus_communis	pycom09g09790
rosa_chinensis	RchiOBHm_Chr2g0146061
rosa_laevigata	RLG00000020182
rosa_multiflora	Rmu_sc0010454.1_g000002 Rmu_sc0014682.1_g000001
rosa_roxburghii	Rroxscaffold_152G00434860 Rroxscaffold_2G00100300
rosa_rugosa	Rorug02G0393600
rosa_samantha	Rh2AG449000 Rh2BG461400 Rh2CG436000 Rh2DG470600
rosa_wichuraiana	Rw2G036670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1271
AasI	GACNNNNNNGTC	1 cut(s)	1085
AatII	GACGTC	1 cut(s)	423
Acc36I	ACCTGC	1 cut(s)	1271
AccB1I	GGYRCC	3 cut(s)	569, 665, 1265
AccB7I	CCANNNNNTGG	1 cut(s)	2050
AccBSI	CCGCTC	2 cut(s)	189, 1320
AccI	GTMKAC	1 cut(s)	1149
AccII	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 989, 1733
AccIII	TCCGGA	2 cut(s)	1519, 1702
AclWI	GGATC	4 cut(s)	1012, 1025, 1791, 1832
AcoI	YGGCCR	2 cut(s)	750, 2041
AcsI	RAATTY	2 cut(s)	1436, 1507
AcvI	CACGTG	1 cut(s)	124
AcyI	GRCGYC	4 cut(s)	420, 570, 1266, 1808
AdeI	CACNNNGTG	1 cut(s)	2278
AfaI	GTAC	5 cut(s)	173, 1109, 1175, 1209, 2060
AfiI	CCNNNNNNNGG	5 cut(s)	277, 450, 690, 1119, 2050
AflIII	ACRYGT	1 cut(s)	123
AgsI	TTSAA	7 cut(s)	586, 1093, 1135, 1531, 1630, 2008, 2138
AjiI	CACGTC	1 cut(s)	504
AjnI	CCWGG	5 cut(s)	276, 1549, 1996, 2038, 2043
AjuI	GAANNNNNNNTTGG	2 cut(s)	1468, 1500
Alw21I	GWGCWC	2 cut(s)	892, 1910
Alw26I	GTCTC	7 cut(s)	62, 494, 961, 1152, 1194, 1609, 1716
AlwI	GGATC	4 cut(s)	1012, 1025, 1791, 1832
AlwNI	CAGNNNCTG	1 cut(s)	2294
Ama87I	CYCGRG	3 cut(s)	455, 463, 478
Aor13HI	TCCGGA	2 cut(s)	1519, 1702
ApaI	GGGCCC	1 cut(s)	984
ApeKI	GCWGC	6 cut(s)	770, 935, 1358, 1379, 1679, 1718
ApoI	RAATTY	2 cut(s)	1436, 1507
Asp700I	GAANNNNTTC	1 cut(s)	1329
AspA2I	CCTAGG	1 cut(s)	1925
AspLEI	GCGC	8 cut(s)	242, 289, 336, 462, 572, 935, 989, 1268
AsuC2I	CCSGG	7 cut(s)	445, 497, 979, 984, 1768, 1828, 1860
AsuHPI	GGTGA	8 cut(s)	95, 200, 1334, 1337, 1750, 2012, 2065, 2264
AvaI	CYCGRG	3 cut(s)	455, 463, 478
AvaII	GGWCC	4 cut(s)	488, 829, 1502, 1922
AvrII	CCTAGG	1 cut(s)	1925
BaeGI	GKGCMC	2 cut(s)	984, 1852
BalI	TGGCCA	2 cut(s)	752, 2043
BamHI	GGATCC	1 cut(s)	1017
BanI	GGYRCC	3 cut(s)	569, 665, 1265
BanII	GRGCYC	3 cut(s)	892, 984, 1290
BbrPI	CACGTG	1 cut(s)	124
BbsI	GAAGAC	1 cut(s)	1081
Bbv12I	GWGCWC	2 cut(s)	892, 1910
BbvI	GCAGC	6 cut(s)	782, 947, 1366, 1370, 1691, 1705
BccI	CCATC	2 cut(s)	920, 1477
BcgI	CGANNNNNNTGC	2 cut(s)	1526, 1560
BciT130I	CCWGG	5 cut(s)	278, 1551, 1998, 2040, 2045
BcnI	CCSGG	7 cut(s)	445, 497, 979, 984, 1768, 1828, 1860
BcoDI	GTCTC	7 cut(s)	62, 494, 961, 1152, 1194, 1609, 1716
BfaI	CTAG	6 cut(s)	696, 1124, 1145, 1565, 1926, 1992
BfmI	CTRYAG	1 cut(s)	966
BfoI	RGCGCY	3 cut(s)	463, 573, 1269
BfuAI	ACCTGC	1 cut(s)	1271
BlnI	CCTAGG	1 cut(s)	1925
Bme18I	GGWCC	4 cut(s)	488, 829, 1502, 1922
BmeT110I	CYCGRG	3 cut(s)	455, 463, 478
BmgBI	CACGTC	1 cut(s)	504
BmrI	ACTGGG	1 cut(s)	2322
BmsI	GCATC	3 cut(s)	2086, 2110, 2278
BmuI	ACTGGG	1 cut(s)	2322
BoxI	GACNNNNGTC	1 cut(s)	480
BpiI	GAAGAC	1 cut(s)	1081
BpmI	CTGGAG	2 cut(s)	275, 1572
BpuMI	CCSGG	7 cut(s)	445, 497, 979, 984, 1768, 1828, 1860
BsaAI	YACGTR	1 cut(s)	124
BsaHI	GRCGYC	4 cut(s)	420, 570, 1266, 1808
BsaI	GGTCTC	3 cut(s)	961, 1194, 1716
BsaWI	WCCGGW	4 cut(s)	105, 555, 1519, 1702
BsaXI	ACNNNNNCTCC	4 cut(s)	662, 692, 893, 923
Bsc4I	CCNNNNNNNGG	5 cut(s)	277, 450, 690, 1119, 2050
Bse118I	RCCGGY	2 cut(s)	527, 686
Bse1I	ACTGG	4 cut(s)	292, 1582, 2288, 2317
Bse3DI	GCAATG	3 cut(s)	1368, 1674, 2269
BseAI	TCCGGA	2 cut(s)	1519, 1702
BseBI	CCWGG	5 cut(s)	278, 1551, 1998, 2040, 2045
BseGI	GGATG	4 cut(s)	638, 1646, 1969, 2125
BseLI	CCNNNNNNNGG	5 cut(s)	277, 450, 690, 1119, 2050
BseMI	GCAATG	3 cut(s)	1368, 1674, 2269
BseMII	CTCAG	1 cut(s)	2201
BseNI	ACTGG	4 cut(s)	292, 1582, 2288, 2317
BseRI	GAGGAG	4 cut(s)	145, 173, 212, 2296
BseSI	GKGCMC	2 cut(s)	984, 1852
BseXI	GCAGC	6 cut(s)	782, 947, 1366, 1370, 1691, 1705
BseYI	CCCAGC	5 cut(s)	939, 1057, 1354, 1568, 1958
Bsh1236I	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 989, 1733
Bsh1285I	CGRYCG	2 cut(s)	873, 904
BshNI	GGYRCC	3 cut(s)	569, 665, 1265
BsiEI	CGRYCG	2 cut(s)	873, 904
BsiHKAI	GWGCWC	2 cut(s)	892, 1910
BsiHKCI	CYCGRG	3 cut(s)	455, 463, 478
BslFI	GGGAC	5 cut(s)	280, 305, 474, 479, 1337
BslI	CCNNNNNNNGG	5 cut(s)	277, 450, 690, 1119, 2050
BsmAI	GTCTC	7 cut(s)	62, 494, 961, 1152, 1194, 1609, 1716
BsmBI	CGTCTC	2 cut(s)	494, 1609
BsmFI	GGGAC	5 cut(s)	280, 305, 474, 479, 1337
BsmI	GAATGC	1 cut(s)	1898
Bso31I	GGTCTC	3 cut(s)	961, 1194, 1716
BsoBI	CYCGRG	3 cut(s)	455, 463, 478
Bsp120I	GGGCCC	1 cut(s)	980
Bsp1286I	GDGCHC	5 cut(s)	892, 984, 1290, 1852, 1910
Bsp13I	TCCGGA	2 cut(s)	1519, 1702
Bsp143I	GATC	8 cut(s)	561, 1017, 1218, 1231, 1384, 1431, 1783, 1837
Bsp19I	CCATGG	3 cut(s)	247, 615, 825
BspCNI	CTCAG	1 cut(s)	2200
BspEI	TCCGGA	2 cut(s)	1519, 1702
BspFNI	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 989, 1733
BspMAI	CTGCAG	1 cut(s)	970
BspMI	ACCTGC	1 cut(s)	1271
BspPI	GGATC	4 cut(s)	1012, 1025, 1791, 1832
BspQI	GCTCTTC	1 cut(s)	1320
BspT107I	GGYRCC	3 cut(s)	569, 665, 1265
BspTNI	GGTCTC	3 cut(s)	961, 1194, 1716
BsrBI	CCGCTC	2 cut(s)	189, 1320
BsrDI	GCAATG	3 cut(s)	1368, 1674, 2269
BsrFI	RCCGGY	2 cut(s)	527, 686
BsrI	ACTGG	4 cut(s)	292, 1582, 2288, 2317
BssAI	RCCGGY	2 cut(s)	527, 686
BssMI	GATC	8 cut(s)	561, 1017, 1218, 1231, 1384, 1431, 1783, 1837
BssNI	GRCGYC	4 cut(s)	420, 570, 1266, 1808
BssT1I	CCWWGG	5 cut(s)	247, 615, 825, 1013, 1925
Bst2UI	CCWGG	5 cut(s)	278, 1551, 1998, 2040, 2045
Bst4CI	ACNGT	4 cut(s)	1027, 1200, 1450, 1985
Bst6I	CTCTTC	2 cut(s)	1308, 1320
BstACI	GRCGYC	4 cut(s)	420, 570, 1266, 1808
BstBAI	YACGTR	1 cut(s)	124
BstC8I	GCNNGC	8 cut(s)	338, 529, 688, 712, 754, 880, 1278, 1661
BstDEI	CTNAG	1 cut(s)	2187
BstDSI	CCRYGG	4 cut(s)	247, 615, 661, 825
BstF5I	GGATG	4 cut(s)	638, 1646, 1969, 2125
BstFNI	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 989, 1733
BstH2I	RGCGCY	3 cut(s)	463, 573, 1269
BstHHI	GCGC	8 cut(s)	242, 289, 336, 462, 572, 935, 989, 1268
BstKTI	GATC	8 cut(s)	564, 1020, 1221, 1234, 1387, 1434, 1786, 1840
BstMAI	GTCTC	7 cut(s)	62, 494, 961, 1152, 1194, 1609, 1716
BstMBI	GATC	8 cut(s)	561, 1017, 1218, 1231, 1384, 1431, 1783, 1837
BstMCI	CGRYCG	2 cut(s)	873, 904
BstNI	CCWGG	5 cut(s)	278, 1551, 1998, 2040, 2045
BstNSI	RCATGY	3 cut(s)	331, 1667, 1835
BstPAI	GACNNNNGTC	1 cut(s)	480
BstSFI	CTRYAG	1 cut(s)	966
BstSLI	GKGCMC	2 cut(s)	984, 1852
BstUI	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 989, 1733
BstV1I	GCAGC	6 cut(s)	782, 947, 1366, 1370, 1691, 1705
BstV2I	GAAGAC	1 cut(s)	1081
BstX2I	RGATCY	2 cut(s)	1017, 1783
BstXI	CCANNNNNNTGG	1 cut(s)	748
BstYI	RGATCY	2 cut(s)	1017, 1783
BtgI	CCRYGG	4 cut(s)	247, 615, 661, 825
BtgZI	GCGATG	3 cut(s)	898, 991, 1455
BtrI	CACGTC	1 cut(s)	504
BtsCI	GGATG	4 cut(s)	638, 1646, 1969, 2125
BtsI	GCAGTG	1 cut(s)	2031
BtsIMutI	CAGTG	3 cut(s)	2031, 2149, 2176
BveI	ACCTGC	1 cut(s)	1271
Cac8I	GCNNGC	8 cut(s)	338, 529, 688, 712, 754, 880, 1278, 1661
CaiI	CAGNNNCTG	1 cut(s)	2294
CfoI	GCGC	8 cut(s)	242, 289, 336, 462, 572, 935, 989, 1268
Cfr10I	RCCGGY	2 cut(s)	527, 686
CseI	GACGC	2 cut(s)	107, 1816
Csp6I	GTAC	5 cut(s)	172, 1108, 1174, 1208, 2059
CviQI	GTAC	5 cut(s)	172, 1108, 1174, 1208, 2059
DdeI	CTNAG	1 cut(s)	2187
DinI	GGCGCC	2 cut(s)	571, 1267
DpnI	GATC	8 cut(s)	563, 1019, 1220, 1233, 1386, 1433, 1785, 1839
DpnII	GATC	8 cut(s)	561, 1017, 1218, 1231, 1384, 1431, 1783, 1837
DraIII	CACNNNGTG	1 cut(s)	2278
DrdI	GACNNNNNNGTC	1 cut(s)	1085
DseDI	GACNNNNNNGTC	1 cut(s)	1085
EaeI	YGGCCR	2 cut(s)	750, 2041
Eam1104I	CTCTTC	2 cut(s)	1308, 1320
EarI	CTCTTC	2 cut(s)	1308, 1320
EciI	GGCGGA	4 cut(s)	247, 882, 900, 1170
Ecl136II	GAGCTC	1 cut(s)	890
Eco130I	CCWWGG	5 cut(s)	247, 615, 825, 1013, 1925
Eco147I	AGGCCT	1 cut(s)	1697
Eco24I	GRGCYC	3 cut(s)	892, 984, 1290
Eco31I	GGTCTC	3 cut(s)	961, 1194, 1716
Eco32I	GATATC	1 cut(s)	1876
Eco47I	GGWCC	4 cut(s)	488, 829, 1502, 1922
Eco53kI	GAGCTC	1 cut(s)	890
Eco72I	CACGTG	1 cut(s)	124
Eco88I	CYCGRG	3 cut(s)	455, 463, 478
EcoICRI	GAGCTC	1 cut(s)	890
EcoO109I	RGGNCCY	1 cut(s)	488
EcoRI	GAATTC	1 cut(s)	1507
EcoRII	CCWGG	5 cut(s)	276, 1549, 1996, 2038, 2043
EcoRV	GATATC	1 cut(s)	1876
EcoT14I	CCWWGG	5 cut(s)	247, 615, 825, 1013, 1925
EcoT38I	GRGCYC	3 cut(s)	892, 984, 1290
EgeI	GGCGCC	2 cut(s)	571, 1267
EheI	GGCGCC	2 cut(s)	571, 1267
ErhI	CCWWGG	5 cut(s)	247, 615, 825, 1013, 1925
Esp3I	CGTCTC	2 cut(s)	494, 1609
FalI	AAGNNNNNCTT	2 cut(s)	1317, 1349
FaqI	GGGAC	5 cut(s)	280, 305, 474, 479, 1337
FauI	CCCGC	5 cut(s)	310, 359, 683, 1149, 1668
FauNDI	CATATG	1 cut(s)	2330
FblI	GTMKAC	1 cut(s)	1149
FokI	GGATG	4 cut(s)	625, 1633, 1976, 2132
FriOI	GRGCYC	3 cut(s)	892, 984, 1290
FspBI	CTAG	6 cut(s)	696, 1124, 1145, 1565, 1926, 1992
GlaI	GCGC	8 cut(s)	241, 288, 335, 461, 571, 934, 988, 1267
GsaI	CCCAGC	5 cut(s)	943, 1061, 1358, 1572, 1962
GsuI	CTGGAG	2 cut(s)	275, 1572
HaeII	RGCGCY	3 cut(s)	463, 573, 1269
HgaI	GACGC	2 cut(s)	107, 1816
HhaI	GCGC	8 cut(s)	242, 289, 336, 462, 572, 935, 989, 1268
Hin1I	GRCGYC	4 cut(s)	420, 570, 1266, 1808
Hin6I	GCGC	8 cut(s)	240, 287, 334, 460, 570, 933, 987, 1266
HinP1I	GCGC	8 cut(s)	240, 287, 334, 460, 570, 933, 987, 1266
HindIII	AAGCTT	1 cut(s)	1274
HphI	GGTGA	8 cut(s)	95, 200, 1334, 1337, 1750, 2012, 2065, 2264
Hpy166II	GTNNAC	8 cut(s)	121, 174, 853, 993, 1129, 1150, 1558, 1575
Hpy188III	TCNNGA	6 cut(s)	437, 1043, 1520, 1614, 1703, 1945
Hpy8I	GTNNAC	8 cut(s)	121, 174, 853, 993, 1129, 1150, 1558, 1575
Hpy99I	CGWCG	6 cut(s)	101, 320, 422, 848, 1082, 1810
HpyAV	CCTTC	6 cut(s)	40, 71, 153, 210, 650, 1470
HpyCH4III	ACNGT	4 cut(s)	1027, 1200, 1450, 1985
HpyCH4IV	ACGT	4 cut(s)	110, 123, 420, 503
HpyCH4V	TGCA	9 cut(s)	968, 1195, 1280, 1427, 1679, 1790, 1898, 2024, 2099
HpyF3I	CTNAG	1 cut(s)	2187
HpySE526I	ACGT	4 cut(s)	110, 123, 420, 503
Hsp92I	GRCGYC	4 cut(s)	420, 570, 1266, 1808
HspAI	GCGC	8 cut(s)	240, 287, 334, 460, 570, 933, 987, 1266
KasI	GGCGCC	2 cut(s)	569, 1265
KflI	GGGWCCC	1 cut(s)	488
Kpn2I	TCCGGA	2 cut(s)	1519, 1702
KroI	GCCGGC	2 cut(s)	527, 686
KroNI	GCCGGC	2 cut(s)	529, 688
Kzo9I	GATC	8 cut(s)	561, 1017, 1218, 1231, 1384, 1431, 1783, 1837
LguI	GCTCTTC	1 cut(s)	1320
Lsp1109I	GCAGC	6 cut(s)	782, 947, 1366, 1370, 1691, 1705
LweI	GCATC	3 cut(s)	2086, 2110, 2278
MaeI	CTAG	6 cut(s)	696, 1124, 1145, 1565, 1926, 1992
MaeII	ACGT	4 cut(s)	110, 123, 420, 503
MaeIII	GTNAC	5 cut(s)	520, 551, 1241, 1738, 2071
MalI	GATC	8 cut(s)	563, 1019, 1220, 1233, 1386, 1433, 1785, 1839
MbiI	CCGCTC	2 cut(s)	189, 1320
MboI	GATC	8 cut(s)	561, 1017, 1218, 1231, 1384, 1431, 1783, 1837
MflI	RGATCY	2 cut(s)	1017, 1783
MhlI	GDGCHC	5 cut(s)	892, 984, 1290, 1852, 1910
MlsI	TGGCCA	2 cut(s)	752, 2043
MluCI	AATT	6 cut(s)	1436, 1452, 1507, 1635, 1762, 2008
MluNI	TGGCCA	2 cut(s)	752, 2043
Mly113I	GGCGCC	2 cut(s)	570, 1266
MlyI	GAGTC	9 cut(s)	470, 632, 858, 902, 1095, 1260, 1510, 2179, 2293
MmeI	TCCRAC	6 cut(s)	120, 429, 651, 853, 1009, 1445
Mox20I	TGGCCA	2 cut(s)	752, 2043
MreI	CGCCGGCG	2 cut(s)	527, 686
MroI	TCCGGA	2 cut(s)	1519, 1702
MroNI	GCCGGC	2 cut(s)	527, 686
MroXI	GAANNNNTTC	1 cut(s)	1329
MscI	TGGCCA	2 cut(s)	752, 2043
MseI	TTAA	4 cut(s)	1272, 1725, 1854, 2034
MslI	CAYNNNNRTG	4 cut(s)	1649, 1668, 1903, 2274
Msp20I	TGGCCA	2 cut(s)	752, 2043
MspA1I	CMGCKG	2 cut(s)	168, 882
Mva1269I	GAATGC	1 cut(s)	1898
MvaI	CCWGG	5 cut(s)	278, 1551, 1998, 2040, 2045
MvnI	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 989, 1733
NaeI	GCCGGC	2 cut(s)	529, 688
NarI	GGCGCC	2 cut(s)	570, 1266
NciI	CCSGG	7 cut(s)	445, 497, 979, 984, 1768, 1828, 1860
NcoI	CCATGG	3 cut(s)	247, 615, 825
NdeI	CATATG	1 cut(s)	2330
NdeII	GATC	8 cut(s)	561, 1017, 1218, 1231, 1384, 1431, 1783, 1837
NgoMIV	GCCGGC	2 cut(s)	527, 686
NmeAIII	GCCGAG	3 cut(s)	348, 938, 2178
NmuCI	GTSAC	3 cut(s)	520, 1738, 2071
NspI	RCATGY	3 cut(s)	331, 1667, 1835
PaqCI	CACCTGC	1 cut(s)	1271
PceI	AGGCCT	1 cut(s)	1697
PciSI	GCTCTTC	1 cut(s)	1320
PcsI	WCGNNNNNNNCGW	6 cut(s)	375, 417, 435, 627, 732, 1074
PctI	GAATGC	1 cut(s)	1898
PdiI	GCCGGC	2 cut(s)	529, 688
PdmI	GAANNNNTTC	1 cut(s)	1329
PfeI	GAWTC	7 cut(s)	596, 632, 765, 806, 1340, 1610, 1802
PflFI	GACNNNGTC	2 cut(s)	419, 848
PflMI	CCANNNNNTGG	1 cut(s)	2050
PfoI	TCCNGGA	3 cut(s)	495, 1549, 1766
PleI	GAGTC	9 cut(s)	470, 631, 857, 902, 1094, 1259, 1510, 2179, 2292
PluTI	GGCGCC	2 cut(s)	573, 1269
PmaCI	CACGTG	1 cut(s)	124
PmlI	CACGTG	1 cut(s)	124
PpsI	GAGTC	9 cut(s)	470, 631, 857, 902, 1094, 1259, 1510, 2179, 2292
Ppu21I	YACGTR	1 cut(s)	124
PpuMI	RGGWCCY	1 cut(s)	488
PshAI	GACNNNNGTC	1 cut(s)	480
Psp124BI	GAGCTC	1 cut(s)	892
Psp5II	RGGWCCY	1 cut(s)	488
Psp6I	CCWGG	5 cut(s)	276, 1549, 1996, 2038, 2043
PspCI	CACGTG	1 cut(s)	124
PspFI	CCCAGC	5 cut(s)	939, 1057, 1354, 1568, 1958
PspGI	CCWGG	5 cut(s)	276, 1549, 1996, 2038, 2043
PspOMI	GGGCCC	1 cut(s)	980
PspPPI	RGGWCCY	1 cut(s)	488
PstI	CTGCAG	1 cut(s)	970
PstNI	CAGNNNCTG	1 cut(s)	2294
PsuI	RGATCY	2 cut(s)	1017, 1783
PsyI	GACNNNGTC	2 cut(s)	419, 848
RsaI	GTAC	5 cut(s)	173, 1109, 1175, 1209, 2060
RsaNI	GTAC	5 cut(s)	172, 1108, 1174, 1208, 2059
RseI	CAYNNNNRTG	4 cut(s)	1649, 1668, 1903, 2274
SacI	GAGCTC	1 cut(s)	892
SapI	GCTCTTC	1 cut(s)	1320
SaqAI	TTAA	4 cut(s)	1272, 1725, 1854, 2034
Sau3AI	GATC	8 cut(s)	561, 1017, 1218, 1231, 1384, 1431, 1783, 1837
SchI	GAGTC	9 cut(s)	470, 632, 858, 902, 1095, 1260, 1510, 2179, 2293
SduI	GDGCHC	5 cut(s)	892, 984, 1290, 1852, 1910
SfaNI	GCATC	3 cut(s)	2086, 2110, 2278
SfcI	CTRYAG	1 cut(s)	966
SfoI	GGCGCC	2 cut(s)	571, 1267
SgrAI	CRCCGGYG	2 cut(s)	527, 686
SinI	GGWCC	4 cut(s)	488, 829, 1502, 1922
SmiMI	CAYNNNNRTG	4 cut(s)	1649, 1668, 1903, 2274
Sse9I	AATT	6 cut(s)	1436, 1452, 1507, 1635, 1762, 2008
SseBI	AGGCCT	1 cut(s)	1697
SspDI	GGCGCC	2 cut(s)	569, 1265
SspI	AATATT	1 cut(s)	134
SspMI	CTAG	6 cut(s)	696, 1124, 1145, 1565, 1926, 1992
SstI	GAGCTC	1 cut(s)	892
StuI	AGGCCT	1 cut(s)	1697
StyI	CCWWGG	5 cut(s)	247, 615, 825, 1013, 1925
TaaI	ACNGT	4 cut(s)	1027, 1200, 1450, 1985
TaiI	ACGT	4 cut(s)	113, 126, 423, 506
TaqI	TCGA	8 cut(s)	128, 438, 804, 1493, 1613, 1805, 1910, 2249
TaqII	GACCGA	1 cut(s)	859
TasI	AATT	6 cut(s)	1436, 1452, 1507, 1635, 1762, 2008
TatI	WGTACW	3 cut(s)	1107, 1207, 2058
TauI	GCSGC	6 cut(s)	168, 334, 824, 885, 1167, 1266
TfiI	GAWTC	7 cut(s)	596, 632, 765, 806, 1340, 1610, 1802
Tru1I	TTAA	4 cut(s)	1272, 1725, 1854, 2034
Tru9I	TTAA	4 cut(s)	1272, 1725, 1854, 2034
TscAI	CASTG	3 cut(s)	2031, 2149, 2176
TseFI	GTSAC	3 cut(s)	520, 1738, 2071
TseI	GCWGC	6 cut(s)	770, 935, 1358, 1379, 1679, 1718
Tsp45I	GTSAC	3 cut(s)	520, 1738, 2071
TspDTI	ATGAA	8 cut(s)	6, 12, 22, 53, 63, 103, 1808, 1891
TspGWI	ACGGA	3 cut(s)	304, 861, 2004
TspRI	CASTG	3 cut(s)	2031, 2149, 2176
Tth111I	GACNNNGTC	2 cut(s)	419, 848
Van91I	CCANNNNNTGG	1 cut(s)	2050
VpaK11BI	GGWCC	4 cut(s)	488, 829, 1502, 1922
XapI	RAATTY	2 cut(s)	1436, 1507
XceI	RCATGY	3 cut(s)	331, 1667, 1835
XmaJI	CCTAGG	1 cut(s)	1925
XmiI	GTMKAC	1 cut(s)	1149
XmnI	GAANNNNTTC	1 cut(s)	1329
XspI	CTAG	6 cut(s)	696, 1124, 1145, 1565, 1926, 1992
ZraI	GACGTC	1 cut(s)	421

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.